BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046599
(131 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 5/109 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS + G G GR RSGGSD+KCYECGEPGHFARECRLR
Sbjct: 61 KNGWRVELSTKA-----GSGRGRDRSGGSDMKCYECGEPGHFARECRLR 104
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 5/109 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS + G G GR RSGGSD+KCYECGEPGHFARECRLR
Sbjct: 61 KNGWRVELSTKA-----GSGRGRDRSGGSDMKCYECGEPGHFARECRLR 104
>gi|115449145|ref|NP_001048352.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|75324004|sp|Q6K4N0.1|RSZ21_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=Os-RSZ21; Short=Os-RSZp21
gi|47497051|dbj|BAD19103.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|47497773|dbj|BAD19873.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113537883|dbj|BAF10266.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|215706489|dbj|BAG93345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706955|dbj|BAG93415.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191722|gb|EEC74149.1| hypothetical protein OsI_09229 [Oryza sativa Indica Group]
gi|222623815|gb|EEE57947.1| hypothetical protein OsJ_08668 [Oryza sativa Japonica Group]
Length = 185
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 112/142 (78%), Gaps = 16/142 (11%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+YVGNLD RV+ +LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DA+R+LDG
Sbjct: 1 MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG------- 113
KNGWRVELS NS GGR R GGS++KCYECGE GHFARECRLR G G
Sbjct: 61 KNGWRVELSRNS-----SSRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGKR 115
Query: 114 ----RRRSRSPRYRRSPSYGRR 131
R RSRSP+YR+SP+YGRR
Sbjct: 116 RSRSRSRSRSPQYRKSPTYGRR 137
>gi|357150077|ref|XP_003575333.1| PREDICTED: uncharacterized protein LOC100846226 [Brachypodium
distachyon]
Length = 231
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 93/108 (86%), Gaps = 3/108 (2%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD R + R++EDEFRVFG++RSVWVAR+PPG+AFIDFD+ RDA+DAIRELDG
Sbjct: 1 MARVYVGNLDPRATAREIEDEFRVFGILRSVWVARKPPGFAFIDFDESRDAKDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
KNGWRVELS S G GRG R R GGSD+KCYECGE GHFARECRL
Sbjct: 61 KNGWRVELSTKS---GSGRGRERERPGGSDMKCYECGESGHFARECRL 105
>gi|332038856|gb|ACX54788.2| putative arginine/serine-rich splicing factor [Arachis diogoi]
gi|357018296|gb|AET50931.1| SR-protein [Arachis diogoi]
gi|414005520|gb|AFW97328.1| SR protein [Arachis diogoi]
Length = 181
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/106 (97%), Positives = 105/106 (99%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLDSRV+ERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDD RDA+DAIRELDG
Sbjct: 1 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDSRDARDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
>gi|356552596|ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 178
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/159 (72%), Positives = 117/159 (73%), Gaps = 34/159 (21%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLDSRV+ERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDD RDAQDAIRELDG
Sbjct: 1 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL------------ 108
KNGWRVELSHNSRGGGGGRGG SGGSDLKCYECGEPGHFARECR+
Sbjct: 61 KNGWRVELSHNSRGGGGGRGGR---SGGSDLKCYECGEPGHFARECRMRGGSGRRRSRSP 117
Query: 109 ----------------RGGSGRRRSRSPR---YRRSPSY 128
RG S R RS SPR Y RSP Y
Sbjct: 118 PRFRRSPSYGRRSYSPRGRSPRHRSLSPRGRSYSRSPPY 156
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R+LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDAQDAIR++DG
Sbjct: 80 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 139
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR R G S+ KCYECGE GHFARECRLR
Sbjct: 140 KNGWRVELSRNASSG----RGGRDRYGSSESKCYECGETGHFARECRLR 184
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R+LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDAQDAIR++DG
Sbjct: 80 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 139
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR R G S+ KCYECGE GHFARECRLR
Sbjct: 140 KNGWRVELSRNASSG----RGGRDRYGSSESKCYECGETGHFARECRLR 184
>gi|359807263|ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
gi|255625755|gb|ACU13222.1| unknown [Glycine max]
gi|255635722|gb|ACU18210.1| unknown [Glycine max]
Length = 178
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/106 (94%), Positives = 101/106 (95%), Gaps = 3/106 (2%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLDSRV+ERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDD RDAQDAIRELDG
Sbjct: 1 MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSHNSRGGGGGRGG SGGSDLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSRGGGGGRGGR---SGGSDLKCYECGEPGHFAREC 103
>gi|224144714|ref|XP_002325387.1| predicted protein [Populus trichocarpa]
gi|222862262|gb|EEE99768.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 100/112 (89%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSERDLEDEFR++GV+RSVWVARRPPGYAF++FDD RDA DAIR LDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
KNGWRVELSHNS+GGGG G G GR GG D KCYECGEPGHFARECRLR GS
Sbjct: 61 KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFARECRLRIGS 112
>gi|359476412|ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Vitis vinifera]
gi|296083786|emb|CBI24003.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/109 (93%), Positives = 104/109 (95%), Gaps = 1/109 (0%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFRVFGVIRSVWVARRPPGYAFIDFDD RDAQDAIRELDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
KNGWRVELSHN GGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL
Sbjct: 61 KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 109
>gi|224121284|ref|XP_002330789.1| predicted protein [Populus trichocarpa]
gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/113 (91%), Positives = 103/113 (91%), Gaps = 4/113 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSERDLEDEFR FGVIRSVWVARRPPGYAFIDFDD RDAQDAI ELDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
Query: 61 KNGWRVELSHN----SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELSHN GGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR
Sbjct: 61 KNGWRVELSHNSRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 113
>gi|115466838|ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21A; AltName:
Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|215686646|dbj|BAG88899.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R+LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDAQDAIR++DG
Sbjct: 1 MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR R G S+ KCYECGE GHFARECRLR
Sbjct: 61 KNGWRVELSRNASSG----RGGRDRYGSSESKCYECGETGHFARECRLR 105
>gi|357436747|ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1 [Medicago truncatula]
Length = 190
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 100/113 (88%), Gaps = 6/113 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDD RDAQDAIR+LDG
Sbjct: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRDLDG 60
Query: 61 KNGWRVELSHN------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
KNGWRVELSHN GGGGGRG G G GGSDLKCYECGEPGHFARECR
Sbjct: 61 KNGWRVELSHNSRSGGGGGGGGGGRGRGGGGGGGSDLKCYECGEPGHFARECR 113
>gi|356526819|ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 176
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/112 (81%), Positives = 97/112 (86%), Gaps = 4/112 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSERDLEDEFR++GV+RSVWVARRPPGYAFI+FDD RDA DAI+ LDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
KNGWRVELSHNS+GGG G G GG D KCYECGEPGHFARECRLR GS
Sbjct: 61 KNGWRVELSHNSKGGGRGGRG----RGGEDTKCYECGEPGHFARECRLRIGS 108
>gi|449437054|ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
gi|449515555|ref|XP_004164814.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 192
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/109 (90%), Positives = 101/109 (92%), Gaps = 1/109 (0%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSER+LEDEFRVFGVIRSVWVARRPPGYAFIDFDD RDA+DAI ELDG
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
Query: 61 KNGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
KNGWRVELSHN GGGG GGGRGRSGGSDLKCYECGEPGHFARECRL
Sbjct: 61 KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRL 109
>gi|255587593|ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 184
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/115 (80%), Positives = 100/115 (86%), Gaps = 3/115 (2%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RVSERDLEDEFR++GV+RSVWVARRPPGYAF++FDD RDA DAIR LDG
Sbjct: 1 MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60
Query: 61 KNGWRVELSHNSR---GGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
KNGWRVELSHNS+ G GGG GGG GG D+KCYECGEPGHFARECRLR GS
Sbjct: 61 KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFARECRLRIGS 115
>gi|357466537|ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medicago truncatula]
gi|355492601|gb|AES73804.1| Splicing factor arginine/serine-rich [Medicago truncatula]
Length = 199
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/115 (80%), Positives = 97/115 (84%), Gaps = 9/115 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVY+GNLDSR+SERDLED+F VFGVIRSVWVARRPPGYAFIDFDD RDA DAIRELDG
Sbjct: 1 MTRVYIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELDG 60
Query: 61 KNGWRVELSHNSRG---------GGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSHNS+ GGGG G GR GGSDLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSKTGGGGGGRGGGGGGGGRGRSGGGGSDLKCYECGEPGHFAREC 115
>gi|15236000|ref|NP_194886.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|145334187|ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|75318746|sp|O81126.1|RZP22_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22; AltName:
Full=RS-containing zinc finger protein 22;
Short=At-RSZ22; Short=At-RSZp22
gi|3281869|emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|3435094|gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana]
gi|7270061|emb|CAB79876.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|17529204|gb|AAL38828.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21436285|gb|AAM51281.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21554419|gb|AAM63524.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|332660531|gb|AEE85931.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|332660532|gb|AEE85932.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
Length = 200
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 116/144 (80%), Gaps = 13/144 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFR FGV+RSVWVARRPPGYAF+DF+D RDA+DAIR LDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60
Query: 61 KNGWRVELSHN--------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
KNGWRVE SHN G GG GGGRG GGSDLKCYECGE GHFARECR RGG+
Sbjct: 61 KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120
Query: 113 GRRRSR-----SPRYRRSPSYGRR 131
GRRRS+ PRYRRSPSYGRR
Sbjct: 121 GRRRSKSRSRTPPRYRRSPSYGRR 144
>gi|226502815|ref|NP_001147002.1| LOC100280612 [Zea mays]
gi|195606380|gb|ACG25020.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195616164|gb|ACG29912.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413924261|gb|AFW64193.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413924262|gb|AFW64194.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
Length = 163
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 5/109 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD+RV+ +LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARVYVGNLDARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGW+VELS ++ G G R R GGS+ KCYECGE GHFARECRLR
Sbjct: 61 KNGWKVELSRSTNG-----RGSRDRHGGSESKCYECGETGHFARECRLR 104
>gi|219887691|gb|ACL54220.1| unknown [Zea mays]
gi|413937734|gb|AFW72285.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286701|gb|AGC79942.1| arginine/serine-rich splicing factor RSZ28V [Zea mays]
Length = 231
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/113 (73%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR+FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS GG GSD+KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSTKV------GGGRGRDRNGSDMKCYECGEAGHFARECRLRIGSG 107
>gi|195649571|gb|ACG44253.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 255
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/113 (73%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR+FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS GG GSD+KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSTKV------GGGRGRDRNGSDMKCYECGEAGHFARECRLRIGSG 107
>gi|194688308|gb|ACF78238.1| unknown [Zea mays]
gi|194701410|gb|ACF84789.1| unknown [Zea mays]
gi|219886269|gb|ACL53509.1| unknown [Zea mays]
gi|223943153|gb|ACN25660.1| unknown [Zea mays]
gi|224028603|gb|ACN33377.1| unknown [Zea mays]
gi|238011236|gb|ACR36653.1| unknown [Zea mays]
gi|413937729|gb|AFW72280.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413937730|gb|AFW72281.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413937731|gb|AFW72282.1| splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413937732|gb|AFW72283.1| splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|413937733|gb|AFW72284.1| splicing factor, arginine/serine-rich 7 isoform 5 [Zea mays]
gi|443286693|gb|AGC79938.1| arginine/serine-rich splicing factor RSZ28I [Zea mays]
gi|443286695|gb|AGC79939.1| arginine/serine-rich splicing factor RSZ28II [Zea mays]
gi|443286697|gb|AGC79940.1| arginine/serine-rich splicing factor RSZ28III [Zea mays]
Length = 253
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/113 (73%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR+FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS GG GSD+KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSTKV------GGGRGRDRNGSDMKCYECGEAGHFARECRLRIGSG 107
>gi|363807806|ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
gi|255640857|gb|ACU20711.1| unknown [Glycine max]
Length = 177
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/112 (76%), Positives = 93/112 (83%), Gaps = 4/112 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNL RV+ERDLEDEFR++GV+ SVWVARRPPGYAFI+FDD RDA DAI+ LDG
Sbjct: 1 MSRVYVGNLHPRVNERDLEDEFRIYGVLMSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
KNGWRVELSHNS+ G G G GG D KCYECGEPGHFARECRLR GS
Sbjct: 61 KNGWRVELSHNSK----GGGRGGRGRGGEDTKCYECGEPGHFARECRLRIGS 108
>gi|225424701|ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
gi|296086540|emb|CBI32129.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 101/116 (87%), Gaps = 4/116 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSER+LEDEFRV+GVIRSVWVARRPPGYAF++F D RDA DAIR LDG
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDG 60
Query: 61 KNGWRVELSHNSR----GGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
K+GWRVELSHNS+ GGGGG G RGR GG DLKCYECGEPGHFARECRLR GS
Sbjct: 61 KSGWRVELSHNSKGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFARECRLRIGS 116
>gi|2582645|emb|CAA05352.1| RSZp22 protein [Arabidopsis thaliana]
Length = 200
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/144 (73%), Positives = 114/144 (79%), Gaps = 13/144 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFR FGV+RSVWVARRPPGYAF+DF+D RDA+DAIR LDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60
Query: 61 KNGWRVELSHN--------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
KNGWRV SHN G GG G GRG GGSDLKCYECGE GHFARECR RGG+
Sbjct: 61 KNGWRVAQSHNRGERGGGGRGGDRGGGGAGRGGRGGSDLKCYECGETGHFARECRNRGGT 120
Query: 113 GRRRSR-----SPRYRRSPSYGRR 131
GRRRS+ PRYRRSPSYGRR
Sbjct: 121 GRRRSKSRSRTPPRYRRSPSYGRR 144
>gi|297802872|ref|XP_002869320.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
gi|297315156|gb|EFH45579.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/118 (77%), Positives = 99/118 (83%), Gaps = 5/118 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFR FGVIRSVWVARRPPGYAF+DF+D RDA+DAIR++DG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRTFGVIRSVWVARRPPGYAFLDFEDPRDARDAIRDVDG 60
Query: 61 KNGWRVELSHN-----SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVE SHN G GG RGGG G G SDLKCYECGE GHFARECR RGG+G
Sbjct: 61 KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGASDLKCYECGETGHFARECRNRGGTG 118
>gi|443286703|gb|AGC79943.1| arginine/serine-rich splicing factor RSZ28VI [Zea mays]
Length = 185
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/113 (73%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR+FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS GG GSD+KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSTKV------GGGRGRDRNGSDMKCYECGEAGHFARECRLRIGSG 107
>gi|388505416|gb|AFK40774.1| unknown [Lotus japonicus]
Length = 181
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/106 (83%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSERDLEDEFR++GV+RSVWVARRPPGYAF++FDD RDA DAI LDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSHNS+GGGGG GG GG DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSKGGGGG-RGGGRGRGGEDLKCYECGEPGHFAREC 105
>gi|449478559|ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 188
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/112 (76%), Positives = 94/112 (83%), Gaps = 6/112 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVY+GNLD RV+ERDLEDEFR+FGV+RSVWVARRPPGYAFI+FDD RDA DAI+ LDG
Sbjct: 1 MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSR------GGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSHNS+ G G GGG G GG DLKCYECGEPGHFAREC
Sbjct: 61 KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFAREC 112
>gi|226532353|ref|NP_001140388.1| uncharacterized protein LOC100272442 [Zea mays]
gi|194699276|gb|ACF83722.1| unknown [Zea mays]
gi|413937728|gb|AFW72279.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286699|gb|AGC79941.1| arginine/serine-rich splicing factor RSZ28IV [Zea mays]
Length = 141
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/113 (73%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR+FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS GG GSD+KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSTKV------GGGRGRDRNGSDMKCYECGEAGHFARECRLRIGSG 107
>gi|224143401|ref|XP_002324943.1| predicted protein [Populus trichocarpa]
gi|222866377|gb|EEF03508.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/117 (86%), Positives = 102/117 (87%), Gaps = 8/117 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD- 59
MSRVYVGNLD RVSER+LEDEFR FGVIRSVWVARRPPGYAFIDFDD RDAQDAI ELD
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDA 60
Query: 60 GKNGWRVELSHN-------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
GKNGWRVELSHN GGGGGRGGGRGRSGGSDLKCYECGE GHFARECRLR
Sbjct: 61 GKNGWRVELSHNSRGGGGGGGGGGGGRGGGRGRSGGSDLKCYECGEAGHFARECRLR 117
>gi|168061025|ref|XP_001782492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666045|gb|EDQ52711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 107/139 (76%), Gaps = 13/139 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD R +ER+LEDEFRV+GV+RSVWV R+PPG+AFI+F+D RDA DAIR L+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR--------GGS 112
KNGWRVELS +S GGGG GG D+KCYECGEPGHFARECRLR GG
Sbjct: 61 KNGWRVELSRSSGGGGGP-----RGRGGDDMKCYECGEPGHFARECRLRIGAGGLGTGGR 115
Query: 113 GRRRSRSPRYRRSPSYGRR 131
G+ SPRYRRSPSYG R
Sbjct: 116 GKSPRASPRYRRSPSYGAR 134
>gi|212722094|ref|NP_001132794.1| uncharacterized protein LOC100194283 [Zea mays]
gi|194695412|gb|ACF81790.1| unknown [Zea mays]
gi|224035575|gb|ACN36863.1| unknown [Zea mays]
gi|413939271|gb|AFW73822.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939272|gb|AFW73823.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939273|gb|AFW73824.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|448878150|gb|AGE46038.1| arginine/serine-rich splicing factor RSZ20 transcript I [Zea mays]
gi|448878152|gb|AGE46039.1| arginine/serine-rich splicing factor RSZ20 transcript II [Zea mays]
gi|448878154|gb|AGE46040.1| arginine/serine-rich splicing factor RSZ20 transcript III [Zea
mays]
gi|448878156|gb|AGE46041.1| arginine/serine-rich splicing factor RSZ20 transcript IV [Zea mays]
Length = 173
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 96/113 (84%), Gaps = 5/113 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLDSRV+ +LEDEFRVFGV+RSVW+AR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARVYVGNLDSRVTSGELEDEFRVFGVLRSVWIARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS NS GGR R GGS+ KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSRNS-----SGRGGRDRYGGSESKCYECGETGHFARECRLRIGSG 108
>gi|448878276|gb|AGE46101.1| arginine/serine-rich splicing factor RSZ28 transcript I [Sorghum
bicolor]
gi|448878278|gb|AGE46102.1| arginine/serine-rich splicing factor RSZ28 transcript II [Sorghum
bicolor]
gi|448878280|gb|AGE46103.1| arginine/serine-rich splicing factor RSZ28 transcript III [Sorghum
bicolor]
gi|448878282|gb|AGE46104.1| arginine/serine-rich splicing factor RSZ28 transcript IV [Sorghum
bicolor]
Length = 246
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 90/109 (82%), Gaps = 6/109 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRTFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGW+VELS + GG G GSD+KCYECGE GHFARECRLR
Sbjct: 61 KNGWKVELSTKAGGGRG------RDRNGSDMKCYECGESGHFARECRLR 103
>gi|242066788|ref|XP_002454683.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|241934514|gb|EES07659.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|448878294|gb|AGE46110.1| arginine/serine-rich splicing factor RSZ19 transcript II [Sorghum
bicolor]
Length = 163
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 96/113 (84%), Gaps = 5/113 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD+RV+ +LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARVYVGNLDARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS NS GGR R GGS+ KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSRNS-----SGRGGRDRYGGSESKCYECGETGHFARECRLRIGSG 108
>gi|448878401|gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens subsp. patens]
Length = 209
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 106/137 (77%), Gaps = 13/137 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD R +ER+LEDEFRV+GV+RSVWV R+PPG+AFI+F+D RDA DAIR L+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR--------GGS 112
KNGWRVELS +S GGGG GG D+KCYECGEPGHFARECRLR GG
Sbjct: 61 KNGWRVELSRSSGGGGGP-----RGRGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGR 115
Query: 113 GRRRSRSPRYRRSPSYG 129
G+ SPRYRRSPSYG
Sbjct: 116 GKSPRASPRYRRSPSYG 132
>gi|168048201|ref|XP_001776556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672147|gb|EDQ58689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 106/137 (77%), Gaps = 13/137 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD R +ER+LEDEFRV+GV+RSVWV R+PPG+AFI+F+D RDA DAIR L+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR--------GGS 112
KNGWRVELS +S GGGG GG D+KCYECGEPGHFARECRLR GG
Sbjct: 61 KNGWRVELSRSSGGGGGP-----RGRGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGR 115
Query: 113 GRRRSRSPRYRRSPSYG 129
G+ SPRYRRSPSYG
Sbjct: 116 GKSPRASPRYRRSPSYG 132
>gi|297821775|ref|XP_002878770.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
gi|297324609|gb|EFH55029.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 106/142 (74%), Gaps = 13/142 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFRV+GVIRSVWVARRPPGYAF+DF+D RDA+DAIRELDG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVYGVIRSVWVARRPPGYAFLDFEDSRDARDAIRELDG 60
Query: 61 KNGWRVELSHN--------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-----R 107
KNGWRVE SHN GGG G G G GGSDLKCYECGE GHFAREC
Sbjct: 61 KNGWRVEQSHNRGGGGGRGGGGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS 120
Query: 108 LRGGSGRRRSRSPRYRRSPSYG 129
R S R PRYR+SP+YG
Sbjct: 121 GRRRSRSRSRSPPRYRKSPTYG 142
>gi|448878399|gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transcript II
[Physcomitrella patens subsp. patens]
Length = 137
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 106/137 (77%), Gaps = 13/137 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD R +ER+LEDEFRV+GV+RSVWV R+PPG+AFI+F+D RDA DAIR L+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR--------GGS 112
KNGWRVELS +S GGGG GG D+KCYECGEPGHFARECRLR GG
Sbjct: 61 KNGWRVELSRSSGGGGGP-----RGRGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGR 115
Query: 113 GRRRSRSPRYRRSPSYG 129
G+ SPRYRRSPSYG
Sbjct: 116 GKSPRASPRYRRSPSYG 132
>gi|195635411|gb|ACG37174.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413922982|gb|AFW62914.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 277
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 88/108 (81%), Gaps = 6/108 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RV+VGNLD RV+ R++EDEFR FGV++SVWVAR+PPG+AFIDFDD RDAQDAIR+LDG
Sbjct: 1 MARVFVGNLDPRVTAREIEDEFRTFGVLKSVWVARKPPGFAFIDFDDRRDAQDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
KNGWRVELS GG G GSD+KCYECGE GHFARECRL
Sbjct: 61 KNGWRVELSTKDGGGRG------RDRNGSDMKCYECGEVGHFARECRL 102
>gi|242092260|ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich splicing factor RSZ21 transcript I [Sorghum
bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich splicing factor RSZ21 transcript III [Sorghum
bicolor]
Length = 186
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 91/109 (83%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+YVGNLD RV+ R+LEDEFR FGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N GGR R GGS+ KCYECGE GHFARECRLR
Sbjct: 61 KNGWRVELSRN----ASSGRGGRDRYGGSESKCYECGETGHFARECRLR 105
>gi|326496394|dbj|BAJ94659.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517812|dbj|BAK03824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 182
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 97/113 (85%), Gaps = 4/113 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVG+LD V+ R+LEDEFRVFGV+RSVWVAR+PPG+AF+DFDD RDAQDAI++LDG
Sbjct: 1 MARVYVGSLDPAVTARELEDEFRVFGVLRSVWVARKPPGFAFVDFDDRRDAQDAIKDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS N+ GGR RSGGS++KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSRNAS----SGRGGRDRSGGSEMKCYECGESGHFARECRLRIGSG 109
>gi|15224171|ref|NP_180035.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75337303|sp|Q9SJA6.1|RZ22A_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22A; AltName:
Full=RS-containing zinc finger protein 22A;
Short=At-RSZ22a; Short=At-RSZp22a
gi|4572679|gb|AAD23894.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|26450830|dbj|BAC42523.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|28950713|gb|AAO63280.1| At2g24590 [Arabidopsis thaliana]
gi|330252501|gb|AEC07595.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 196
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 106/140 (75%), Gaps = 11/140 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFR FGVIRSVWVARRPPGYAF+DF+D RDA+DAIRE+DG
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60
Query: 61 KNGWRVELSHN-----SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC------RLR 109
KNGWRVE SHN RGGG G G G GGSDLKCYECGE GHFAREC R
Sbjct: 61 KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGSGGR 120
Query: 110 GGSGRRRSRSPRYRRSPSYG 129
S R PRYR+SP+YG
Sbjct: 121 RRSRSRSRSPPRYRKSPTYG 140
>gi|68035449|gb|AAY84872.1| pre-mRNA processing factor [Triticum aestivum]
Length = 167
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 97/113 (85%), Gaps = 4/113 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVG+LD V+ R+LEDEFRVFGV+RSVWVAR+PPG+AF+DFDD RDAQDAI++LDG
Sbjct: 1 MARVYVGSLDPAVTARELEDEFRVFGVLRSVWVARKPPGFAFVDFDDRRDAQDAIKDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS N+ GGR RSGGS++KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSRNAS----SGRGGRDRSGGSEMKCYECGESGHFARECRLRIGSG 109
>gi|448878292|gb|AGE46109.1| arginine/serine-rich splicing factor RSZ19 transcript I [Sorghum
bicolor]
Length = 163
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 95/113 (84%), Gaps = 5/113 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+ VYVGNLD+RV+ +LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MACVYVGNLDARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS NS GGR R GGS+ KCYECGE GHFARECRLR GSG
Sbjct: 61 KNGWRVELSRNS-----SGRGGRDRYGGSESKCYECGETGHFARECRLRIGSG 108
>gi|195626508|gb|ACG35084.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 184
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+Y+GNLD RV+ R+LEDEFR FGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR R GGS+ KCYECGE GHFARECRLR
Sbjct: 61 KNGWRVELSRNA----SGGRGGRDRHGGSESKCYECGETGHFARECRLR 105
>gi|226497758|ref|NP_001149338.1| LOC100282961 [Zea mays]
gi|195607586|gb|ACG25623.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195611760|gb|ACG27710.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223942181|gb|ACN25174.1| unknown [Zea mays]
gi|223946575|gb|ACN27371.1| unknown [Zea mays]
gi|413952876|gb|AFW85525.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413952877|gb|AFW85526.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413952878|gb|AFW85527.1| Splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413952879|gb|AFW85528.1| Splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|448878146|gb|AGE46036.1| arginine/serine-rich splicing factor RSZ21 transcript I [Zea mays]
gi|448878148|gb|AGE46037.1| arginine/serine-rich splicing factor RSZ21 transcript II [Zea mays]
Length = 184
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+Y+GNLD RV+ R+LEDEFR FGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR R GGS+ KCYECGE GHFARECRLR
Sbjct: 61 KNGWRVELSRNA----SGGRGGRDRHGGSESKCYECGETGHFARECRLR 105
>gi|326491985|dbj|BAJ98217.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 194
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/119 (73%), Positives = 101/119 (84%), Gaps = 6/119 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+YVGNLD+RV+ +LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DA+R+LDG
Sbjct: 1 MARLYVGNLDARVTAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHN------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS N RGGGGG GGG GGSD+KCYECGE GHFARECRLR G+G
Sbjct: 61 KNGWRVELSRNDRGDRGGRGGGGGGGGGGRDRGGSDMKCYECGESGHFARECRLRIGAG 119
>gi|226497532|ref|NP_001141411.1| uncharacterized protein LOC100273521 [Zea mays]
gi|194704502|gb|ACF86335.1| unknown [Zea mays]
Length = 222
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 88/108 (81%), Gaps = 6/108 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RV+VGNLD RV+ R++EDEFR FGV++SVWVAR+PPG+AFIDFDD RDAQDAIR+LDG
Sbjct: 1 MARVFVGNLDPRVTAREIEDEFRTFGVLKSVWVARKPPGFAFIDFDDRRDAQDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
KNGWRVELS GG G GSD+KCYECGE GHFARECRL
Sbjct: 61 KNGWRVELSTKDGGGRG------RDRNGSDMKCYECGEVGHFARECRL 102
>gi|357124980|ref|XP_003564174.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 185
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 94/109 (86%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD V+ R+LEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDAQDAIR++DG
Sbjct: 1 MARVYVGNLDPAVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR SGGS++KCYECGE GHFARECRLR
Sbjct: 61 KNGWRVELSRNASSGRGGRDR----SGGSEMKCYECGESGHFARECRLR 105
>gi|448878397|gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens subsp. patens]
Length = 210
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 104/135 (77%), Gaps = 13/135 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD R +ER+LEDEFRV+GV+RSVWV R+PPG+AFI+F+D RDA DAIR L+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR--------GGS 112
KNGWRVELS +S GGGG GG D+KCYECGEPGHFARECRLR GG
Sbjct: 61 KNGWRVELSRSSGGGGGP-----RGRGGDDMKCYECGEPGHFARECRLRIGAGGLGSGGR 115
Query: 113 GRRRSRSPRYRRSPS 127
G+ SPRYRRSPS
Sbjct: 116 GKSPRASPRYRRSPS 130
>gi|68035360|gb|AAY84871.1| pre-mRNA processing factor [Triticum aestivum]
Length = 194
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 101/119 (84%), Gaps = 6/119 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+YVGNLD+RV+ +LEDEFRVFG++RSVWVAR+PPG+AFIDFDD RDA+DA+R+LDG
Sbjct: 1 MARLYVGNLDARVTAGELEDEFRVFGILRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHN------SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS N RGGGGG GGG GGSD+KCYECGE GHFARECRLR G+G
Sbjct: 61 KNGWRVELSRNDRGDRGGRGGGGGGGGGGRGRGGSDMKCYECGESGHFARECRLRIGAG 119
>gi|413952875|gb|AFW85524.1| hypothetical protein ZEAMMB73_327204 [Zea mays]
Length = 138
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 93/109 (85%), Gaps = 4/109 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+Y+GNLD RV+ R+LEDEFR FGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS N+ G GGR R GGS+ KCYECGE GHFARECRLR
Sbjct: 61 KNGWRVELSRNA----SGGRGGRDRHGGSESKCYECGETGHFARECRLR 105
>gi|357137369|ref|XP_003570273.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 189
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 99/116 (85%), Gaps = 3/116 (2%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+YVGNLD+RV+ +LEDEFRVFG +RSVWVAR+PPG+AFIDFDD RDA+DA+R+LDG
Sbjct: 1 MARLYVGNLDARVTAGELEDEFRVFGALRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60
Query: 61 KNGWRVELSHNS---RGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
KNGWRVELS NS GG G GGGR R GGS+ KCYECGE GHFARECRLR G+G
Sbjct: 61 KNGWRVELSRNSSGRGGGRDGGGGGRDRHGGSESKCYECGESGHFARECRLRIGAG 116
>gi|255548616|ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223545308|gb|EEF46813.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 179
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/158 (72%), Positives = 116/158 (73%), Gaps = 31/158 (19%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ERDLEDEFR FGVIRSVWVARRPPGYAFIDFDD RDA DAI ELDG
Sbjct: 1 MSRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDADDAIHELDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL------------ 108
KNGWRVELSHNS GGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL
Sbjct: 61 KNGWRVELSHNS-RGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRVGSGRRRSRSP 119
Query: 109 ---------------RGGSGRRRSRSPR---YRRSPSY 128
RG S +RRS SPR Y RSP Y
Sbjct: 120 RYRRSPSYGRRSYSPRGRSPKRRSISPRGRSYSRSPPY 157
>gi|297850860|ref|XP_002893311.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
gi|297339153|gb|EFH69570.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
Length = 162
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 99/141 (70%), Gaps = 20/141 (14%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ER+LEDEFR+FGV+R+VWVARRPPGYAF++FDD RDA DAIR LD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFRIFGVLRNVWVARRPPGYAFLEFDDERDALDAIRALDR 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRG---------- 110
KNGWRVELSH +GG GG GG RG D KCYECGE GHFARECR
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGI--EDSKCYECGELGHFARECRRGRGSVRRRSPSP 118
Query: 111 --------GSGRRRSRSPRYR 123
G GR SRSP YR
Sbjct: 119 RRRRSPDYGYGRSYSRSPPYR 139
>gi|302760851|ref|XP_002963848.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
gi|300169116|gb|EFJ35719.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
Length = 181
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 91/113 (80%), Gaps = 4/113 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD R +ER+LEDEFR FGV+RSVWVAR+PPG+AFI+FDDYRDAQDAI+ ++G
Sbjct: 1 MARVYVGNLDPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGS----DLKCYECGEPGHFARECRLR 109
KNGWRVELS +S GG GG R G +LKCYECGE GHFAREC LR
Sbjct: 61 KNGWRVELSRSSNGGRGGGRDPGAREGRGGGGDELKCYECGEAGHFARECVLR 113
>gi|302780048|ref|XP_002971799.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
gi|300160931|gb|EFJ27548.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
Length = 229
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 91/113 (80%), Gaps = 4/113 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD R +ER+LEDEFR FGV+RSVWVAR+PPG+AFI+FDDYRDAQDAI+ ++G
Sbjct: 1 MARVYVGNLDPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMNG 60
Query: 61 KNGWRVELSHNSRGGGGG----RGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
KNGWRVELS +S GG GG GG +LKCYECGE GHFAREC LR
Sbjct: 61 KNGWRVELSRSSNGGRGGGRDPGAREGRGGGGDELKCYECGEAGHFARECVLR 113
>gi|2582643|emb|CAA05351.1| RSZp21 protein [Arabidopsis thaliana]
Length = 184
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ER+LEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI LD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSH +GG GG GG RG D KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGI--EDSKCYECGELGHFAREC 104
>gi|116787469|gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 89/108 (82%), Gaps = 4/108 (3%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RV+ER+LEDEFRV+GV+RSVWVAR+PPG+AFI+F+D RDA DA+R L+G
Sbjct: 1 MSRVYVGNLDPRVTERELEDEFRVYGVLRSVWVARKPPGFAFIEFEDRRDAGDAVRALNG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
KN WRVELS NS GGG G G GG D+ CY+CGE GHFAREC L
Sbjct: 61 KNDWRVELSRNSGGGGRGGRG----RGGDDMSCYKCGESGHFARECNL 104
>gi|18395314|ref|NP_564208.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|42571621|ref|NP_973901.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|75318747|sp|O81127.1|RZP21_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=At-RSZ21; Short=At-RSZp21
gi|3435096|gb|AAD12770.1| SRZ21 [Arabidopsis thaliana]
gi|222424570|dbj|BAH20240.1| AT1G23860 [Arabidopsis thaliana]
gi|332192319|gb|AEE30440.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192320|gb|AEE30441.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 187
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ER+LEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI LD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSH +GG GG GG RG D KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGI--EDSKCYECGELGHFAREC 104
>gi|9369411|gb|AAF87159.1|AC002423_24 T23E23.2 [Arabidopsis thaliana]
Length = 183
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ER+LEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI LD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSH +GG GG GG RG D KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGI--EDSKCYECGELGHFAREC 104
>gi|334182802|ref|NP_001185074.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192322|gb|AEE30443.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 183
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ER+LEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI LD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSH +GG GG GG RG D KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGI--EDSKCYECGELGHFAREC 104
>gi|186478807|ref|NP_001117342.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192321|gb|AEE30442.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 164
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 87/106 (82%), Gaps = 2/106 (1%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ER+LEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI LD
Sbjct: 1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSH +GG GG GG RG D KCYECGE GHFAREC
Sbjct: 61 KNGWRVELSHKDKGGRGGGGGRRGGI--EDSKCYECGELGHFAREC 104
>gi|449434905|ref|XP_004135236.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor RSZ21-like [Cucumis sativus]
Length = 158
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 78/106 (73%), Gaps = 24/106 (22%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVY+GNLD RV+ERDLEDEFR+FGV+RSVWVARRPPGYAFI+FDD RDA DAI+ LDG
Sbjct: 1 MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
KNGWRVELSHNS+GG GHFAREC
Sbjct: 61 KNGWRVELSHNSKGG------------------------GHFAREC 82
>gi|118489183|gb|ABK96398.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/72 (94%), Positives = 68/72 (94%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSERDLEDEFR FGVIRSVWVARRPPGYAFIDFDD RDAQDAI ELDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
Query: 61 KNGWRVELSHNS 72
KNGWRVELSHNS
Sbjct: 61 KNGWRVELSHNS 72
>gi|346472149|gb|AEO35919.1| hypothetical protein [Amblyomma maculatum]
Length = 165
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 15 ERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGWRVELSHNSRG 74
ERDLEDEFRV+GV+RSVWVARRPPGYAF++FDD RDA DAIR LDGKNGWRVE+SH S+
Sbjct: 11 ERDLEDEFRVYGVLRSVWVARRPPGYAFVEFDDRRDALDAIRALDGKNGWRVEMSHQSKD 70
Query: 75 GGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G GGRGGG GG D+KCY CGEPGHFAREC
Sbjct: 71 GSGGRGGGGRSRGGEDMKCYGCGEPGHFAREC 102
>gi|448878286|gb|AGE46106.1| arginine/serine-rich splicing factor RSZ21 transcript II [Sorghum
bicolor]
Length = 79
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 69/77 (89%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+R+YVGNLD RV+ R+LEDEFR FGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDG
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDG 60
Query: 61 KNGWRVELSHNSRGGGG 77
KNGWRVELS N+ G G
Sbjct: 61 KNGWRVELSRNASSGRG 77
>gi|218191146|gb|EEC73573.1| hypothetical protein OsI_08026 [Oryza sativa Indica Group]
Length = 235
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 84/145 (57%), Gaps = 45/145 (31%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRD---------- 50
M+RVYVGNLD RV+ R++EDEFRVFGV+RS ++A + DD+
Sbjct: 1 MARVYVGNLDPRVTAREIEDEFRVFGVLRSFFIA----DFCHNIKDDFVSTTMEEIFRLL 56
Query: 51 --------------------------AQDAIRELDGKNGWRVELSHNSRGGGGGRGGGRG 84
A+DAIR+LDGKNGWRVELS + G G GR
Sbjct: 57 LNTKNVYGLLENHQVLPLLTLMTAGHAEDAIRDLDGKNGWRVELSTKA-----GSGRGRD 111
Query: 85 RSGGSDLKCYECGEPGHFARECRLR 109
RSGGSD+KCYECGEPGHFARECRLR
Sbjct: 112 RSGGSDMKCYECGEPGHFARECRLR 136
>gi|413924259|gb|AFW64191.1| hypothetical protein ZEAMMB73_035767, partial [Zea mays]
Length = 191
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 5/81 (6%)
Query: 29 RSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGWRVELSHNSRGGGGGRGGGRGRSGG 88
RSVWVAR+PPG+AFIDFDD RDA+DAIR+LDGKNGW+VELS ++ G G R R GG
Sbjct: 57 RSVWVARKPPGFAFIDFDDRRDAEDAIRDLDGKNGWKVELSRSTNG-----RGSRDRHGG 111
Query: 89 SDLKCYECGEPGHFARECRLR 109
S+ KCYECGE GHFARECRLR
Sbjct: 112 SESKCYECGETGHFARECRLR 132
>gi|413924264|gb|AFW64196.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 136
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 67/82 (81%), Gaps = 5/82 (6%)
Query: 28 IRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGWRVELSHNSRGGGGGRGGGRGRSG 87
+ SVWVAR+PPG+AFIDFDD RDA+DAIR+LDGKNGW+VELS ++ G G R R G
Sbjct: 1 MESVWVARKPPGFAFIDFDDRRDAEDAIRDLDGKNGWKVELSRSTNG-----RGSRDRHG 55
Query: 88 GSDLKCYECGEPGHFARECRLR 109
GS+ KCYECGE GHFARECRLR
Sbjct: 56 GSESKCYECGETGHFARECRLR 77
>gi|413924263|gb|AFW64195.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 178
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 66/80 (82%), Gaps = 5/80 (6%)
Query: 30 SVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGWRVELSHNSRGGGGGRGGGRGRSGGS 89
SVWVAR+PPG+AFIDFDD RDA+DAIR+LDGKNGW+VELS ++ G G R R GGS
Sbjct: 45 SVWVARKPPGFAFIDFDDRRDAEDAIRDLDGKNGWKVELSRSTNG-----RGSRDRHGGS 99
Query: 90 DLKCYECGEPGHFARECRLR 109
+ KCYECGE GHFARECRLR
Sbjct: 100 ESKCYECGETGHFARECRLR 119
>gi|302845634|ref|XP_002954355.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
gi|300260285|gb|EFJ44505.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
Length = 287
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 2/108 (1%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+YVGNL + ++ERD+ DEF FG +R++WVAR+PPG+AF++ +D RDA DA+R+LDG
Sbjct: 3 SRIYVGNLPADIAERDVRDEFERFGRVRTIWVARKPPGFAFLEMEDDRDASDAVRKLDGF 62
Query: 62 NGWRVELS--HNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
GWRVE S + G GG G G +L+CYECGE GH AR+CR
Sbjct: 63 QGWRVEFSRRADRGPPPRGGMGGMGGPMGRELRCYECGEIGHIARDCR 110
>gi|147821435|emb|CAN74578.1| hypothetical protein VITISV_009111 [Vitis vinifera]
Length = 318
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 74/89 (83%), Gaps = 4/89 (4%)
Query: 28 IRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGWRVELSHNSR----GGGGGRGGGR 83
+ SVWVARRPPGYAF++F D RDA DAIR LDGK+GWRVELSHNS+ GGGGG G R
Sbjct: 143 LASVWVARRPPGYAFVEFADRRDAVDAIRGLDGKSGWRVELSHNSKGGGGGGGGGGGRDR 202
Query: 84 GRSGGSDLKCYECGEPGHFARECRLRGGS 112
GR GG DLKCYECGEPGHFARECRLR GS
Sbjct: 203 GRGGGEDLKCYECGEPGHFARECRLRIGS 231
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 28/29 (96%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIR 29
MSRVYVGNLD RVSER+LEDEFRV+GVIR
Sbjct: 1 MSRVYVGNLDPRVSERELEDEFRVYGVIR 29
>gi|159477341|ref|XP_001696769.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158275098|gb|EDP00877.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 200
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 11/130 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+Y+GNL + ++ERD+ DEF FG +R++WVAR+PPG+AF++ +D RDA DA+R+LDG
Sbjct: 3 SRIYIGNLPADIAERDVRDEFERFGRVRTIWVARKPPGFAFMEMEDDRDAADAVRKLDGF 62
Query: 62 NGWRVELSHNS----------RGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR-LRG 110
GWRVE S + GGG G GGG G GG +++CYECGE GH AR+CR +RG
Sbjct: 63 QGWRVEFSRRADRGPPARGGGGGGGFGGGGGPGGPGGREMRCYECGEIGHIARDCRNMRG 122
Query: 111 GSGRRRSRSP 120
G R P
Sbjct: 123 GPASLRGGPP 132
>gi|224121292|ref|XP_002330791.1| predicted protein [Populus trichocarpa]
gi|222872593|gb|EEF09724.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 56/60 (93%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD RVSERDLEDEFR FGVIRSVWVARRPPGYAFIDFDD RDAQDAI ELDG
Sbjct: 1 MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
>gi|413937735|gb|AFW72286.1| hypothetical protein ZEAMMB73_339392, partial [Zea mays]
Length = 119
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/61 (80%), Positives = 57/61 (93%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNLD RV+ R++EDEFR+FGV+RSVWVAR+PPG+AFIDFDD RDAQDAIRELDG
Sbjct: 59 MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 118
Query: 61 K 61
Sbjct: 119 T 119
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 7/111 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + S+++LED FR +G +R+VWVAR PPG+AF++F+D RDA+DAIR LDG+
Sbjct: 9 KVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRT 68
Query: 63 GW----RVELSHNSRGGGGGRGG---GRGRSGGSDLKCYECGEPGHFAREC 106
RVE+S+ G G RG RGR D +CYECG+ GH+AR+C
Sbjct: 69 ICGRRARVEMSNGKSGSGRYRGPPPRSRGRPFHPDDRCYECGDRGHYARDC 119
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 7/111 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + S+++LED FR +G +R+VWVAR PPG+AF++F+D RDA+DAIR LDG+
Sbjct: 9 KVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRT 68
Query: 63 GW----RVELSHNSRGGGGGRGG---GRGRSGGSDLKCYECGEPGHFAREC 106
RVE+S+ G G RG RGR D +CYECG+ GH+AR+C
Sbjct: 69 ICGRRARVEMSNGKSGSGRYRGPPPRSRGRPFHPDDRCYECGDRGHYARDC 119
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 73/111 (65%), Gaps = 14/111 (12%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+GN+ S+R++E EF FG +R VWVAR PPG+AF F+D RDA+DA+RELDG
Sbjct: 1 MSRVYIGNIGDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDG 60
Query: 61 K----NGWRVELSHNSRGGGGGRGGGRGRS-GGSDLKCYECGEPGHFAREC 106
+ RVEL+ +G RGR S+ KCYECG GHFAR+C
Sbjct: 61 RYICGQRARVELA---------KGPSRGRPRQASNEKCYECGRVGHFARDC 102
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L S +LE EF FG +R VWVAR PPG+ FI FDD RDA+DAIRE+DG
Sbjct: 1 MSRIFIGGLPDDASRTELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREMDG 60
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
+ G RV + G R RS + KCY CG+ GH +R+CR R
Sbjct: 61 RRVCGMRVRVEK----ARGPNSNNRNRSSAQNEKCYNCGKIGHLSRDCRSR 107
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L S +LE EF FG +R VWVAR PPG+ FI FDD RDA+DAIRE+DG
Sbjct: 1 MSRIFIGGLPDDASRTELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREMDG 60
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 109
+ G RV + G R RS + KCY CG+ GH +R+CR R
Sbjct: 61 RRVCGMRVRVEK----ARGPNSNNRNRSSAQNEKCYNCGKIGHLSRDCRSR 107
>gi|384245922|gb|EIE19414.1| hypothetical protein COCSUDRAFT_58700 [Coccomyxa subellipsoidea
C-169]
Length = 163
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 81/143 (56%), Gaps = 16/143 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+YVGNL S +ERDLE+EF FG +RSVWVAR+PPG+AF++++D RDA DA+R+LDG
Sbjct: 3 SRIYVGNLPSSTAERDLEEEFIRFGTLRSVWVARKPPGFAFVEYEDPRDADDAVRKLDGF 62
Query: 62 NGWRVELSHN--SRGGGGGRGGGRGR------SGGSDLKCYECGEPGHFA----RECRLR 109
GWRVE S N R R RGR S L G P A R
Sbjct: 63 KGWRVEHSKNRGPRWQDAPRDSYRGRERRYTPSTTPALNLSRSGYPVFRAPLPPPSRRRS 122
Query: 110 GGSGRRRSRSPRY----RRSPSY 128
R R RSP Y RRSPSY
Sbjct: 123 PSVDRYRRRSPSYERIRRRSPSY 145
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 79/119 (66%), Gaps = 5/119 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L S S+++LED F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 9 KVYVGDLGSNASKQELEDAFSYYGSLRNVWVARHPPGFAFVEFEDPRDAEDAVRGLDGRT 68
Query: 63 GW----RVELSHNSRG-GGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
RVELS+ R G G RS + +CYECGE GH+AR+C S R+R
Sbjct: 69 ICGRRARVELSNGKRLRDRGSMRRGAVRSYHPEDRCYECGERGHYARDCPRHRNSRRKR 127
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 84/120 (70%), Gaps = 7/120 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++YVG+L S S++DLED F +G IR+VWVAR PPG+AF++F+D RDA+DA+R LDG++
Sbjct: 16 KIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRS 75
Query: 63 GW----RVELSH--NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
RVELS+ + +G G RGR + KCYECG+ GH+AR+CR R GRRR
Sbjct: 76 ICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHPEDKCYECGDRGHYARDCR-RFKGGRRR 134
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVG+L + S+ +LED F +G +R+VWVAR PPG+AF++F+D RDA+DAIR LDG+
Sbjct: 7 CKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGR 66
Query: 62 NGW----RVELSHNSRG-GGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
RVE+S+ SRG G G R D +CY+CG+ GH+AR+C R
Sbjct: 67 TICGRRARVEMSNGSRGYGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDCTRRRRRRLSL 126
Query: 117 SRSPRYRRSPS 127
+ +PR S S
Sbjct: 127 ACAPRTNSSVS 137
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 7/116 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++YVG+L S S++DLED F +G IR+VWVAR PPG+AF++F+D RDA+DA+R LDG++
Sbjct: 16 KIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRS 75
Query: 63 GW----RVELSH--NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-RLRGG 111
RVELS+ + +G G RGR + KCYECG+ GH+AR+C R +GG
Sbjct: 76 ICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHPEDKCYECGDRGHYARDCRRFKGG 131
>gi|448878290|gb|AGE46108.1| arginine/serine-rich splicing factor RSZ21 transcript IV [Sorghum
bicolor]
Length = 99
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIREL 58
M+R+YVGNLD RV+ R+LEDEFR FGV+RSVWVAR+PPG+AFIDFDD RDA+DAIR L
Sbjct: 1 MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRAL 58
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 5/109 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L S S+++LED F +G +++VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 12 KVYVGDLGSSASKQELEDAFSYYGSLQNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRT 71
Query: 63 GW----RVELSHNSRG-GGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS+ + G G GR + KCYECGE GH+AR+C
Sbjct: 72 LCGRRVRVELSNGKKLRDRGSFRRGSGRPFHPEDKCYECGERGHYARDC 120
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L S +LE EF G +R VWVAR PPG+ FI F+D RDA+DA+RE+DG
Sbjct: 1 MSRIFIGGLPEDASRTELEREFECIGRLRDVWVARNPPGFGFIIFEDPRDAEDAVREMDG 60
Query: 61 K----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSG 113
K + RVEL+ + GG GR + KCY CG+ GH +++CR G G
Sbjct: 61 KKICGSRIRVELARATTGGSRGR-------QIRNEKCYNCGKTGHLSKQCRSSGRDG 110
>gi|159484865|ref|XP_001700473.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158272360|gb|EDO98162.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 224
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVGNL S + E DLE EF FG +R++WVAR+PPG+AFI+ DD RDA+DA+R LDG
Sbjct: 1 MARVYVGNLPSGIREEDLETEFVRFGRLRNIWVARKPPGFAFIEMDDLRDAEDAVRALDG 60
Query: 61 KNGWRVELSHN 71
GWRVE+S N
Sbjct: 61 MKGWRVEISRN 71
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 16/120 (13%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S DLE+EF +G + SVWVAR PPG+A++ F+D RDA+DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSRGGGGGRGG------------GRGRSGGSDLKCYECGEPGHFAREC 106
RV++S++ G R G G R SD++CY C E GHFAR+C
Sbjct: 73 ICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 16/120 (13%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S DLE+EF +G + SVWVAR PPG+A++ F+D RDA+DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSRGGGGGRGG------------GRGRSGGSDLKCYECGEPGHFAREC 106
RV++S++ G R G G R SD++CY C E GHFAR+C
Sbjct: 73 ICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 16/120 (13%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S DLE+EF +G + SVWVAR PPG+A++ F+D RDA+DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSRGGGGGRGG------------GRGRSGGSDLKCYECGEPGHFAREC 106
RV++S++ G R G G R SD++CY C E GHFAR+C
Sbjct: 73 ICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 16/120 (13%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S DLE+EF +G + SVWVAR PPG+A++ F+D RDA+DA+R LDGK
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 62 ---NGWRVELSHNSRGGGGGRGG------------GRGRSGGSDLKCYECGEPGHFAREC 106
RV++S++ G R G G R SD++CY C E GHFAR+C
Sbjct: 73 ICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 6/111 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L S S++DLED F +G +++VWVAR PPG+AF++F+D RDA DA+R LDG++
Sbjct: 12 KVYVGDLGSSASKQDLEDAFGYYGPLKNVWVARHPPGFAFVEFEDPRDADDAVRGLDGRS 71
Query: 63 G----WRVELSHN-SRGGGGGRGGG-RGRSGGSDLKCYECGEPGHFARECR 107
RVE S+ +R G RG RGR D +CY+CGE GH+AR+C+
Sbjct: 72 IAGRRVRVEPSNGMARRRGRDRGVSRRGRPFHPDDRCYQCGERGHYARDCK 122
>gi|448878403|gb|AGE46164.1| arginine/serine-rich splicing factor RSZ23 transcript IV
[Physcomitrella patens subsp. patens]
Length = 95
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVGNLD R +ER+LEDEFRV+GV+RSVWV R+PPG+AFI+F+D RDA DAIR L+G
Sbjct: 1 MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
Query: 61 K 61
Sbjct: 61 M 61
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 69/113 (61%), Gaps = 10/113 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L S +LE EF FG +R VWVAR PPG+ FI F+D RDA+DA+RE+DG
Sbjct: 1 MSRIFIGGLPEDASRNELEKEFESFGRLRDVWVARNPPGFGFIIFEDARDAEDAVREMDG 60
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGG 111
K G R+ + RG GR G + KCY C + GH +R+CR GG
Sbjct: 61 KRVCGSRIRVEF-------ARGPATGRKGREE-KCYNCNKFGHMSRDCRNPGG 105
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 73/109 (66%), Gaps = 5/109 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L S S++ LED F +G + +VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 11 KVYVGDLGSSASKQQLEDAFSYYGPLHNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRI 70
Query: 63 G----WRVELSHNSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS+ + G G GR + KCYECGE GH+AR+C
Sbjct: 71 VCGRRIRVELSNGKKLRDRGFPRRGVGRPFHPEDKCYECGERGHYARDC 119
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 13/124 (10%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++ +LE+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 22 KVYVGELGNSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDARDARDAVRALDGKM 81
Query: 63 GW----RVELSHNSRGGGGGRGGGRG--RSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
RVELS G R RG R +CY+CGE GH+AR+CR+ S R
Sbjct: 82 LCGRRVRVELST-----GKSRNSYRGSSRPFQPTDRCYDCGERGHYARDCRVY--SRRNS 134
Query: 117 SRSP 120
SRSP
Sbjct: 135 SRSP 138
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG+L S ++++ED F +G +RSVWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 14 AKVYVGDLGSNADKQEIEDAFSYYGPLRSVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 62 NGW----RVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS S G RGG G + +CYECG GHFAR+C
Sbjct: 74 TICGRRARVELSTGKSARGYRSRGGRGRSPGRREDRCYECGNRGHFARDC 123
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 9/113 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL S+ +LE EF FG ++SVW+AR PPG+AF++FDD RDA DA+++LD
Sbjct: 59 KVYVGNLGESASKSELEKEFGSFGPLKSVWIARNPPGFAFVEFDDPRDASDAVKDLDSST 118
Query: 63 --GWR--VELSHNSRGGGGGRGGGRGRSGGS-----DLKCYECGEPGHFAREC 106
G R VELS GG GG GG D KCYECGE GHFAR+C
Sbjct: 119 ICGQRASVELSSGDSRRRGGFRGGGSFRGGRGPPRGDSKCYECGEIGHFARDC 171
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVG+L S S+++LE+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 7 CKVYVGDLGSGASKQELEEAFSYYGPLRNVWVARNPPGFAFVEFEDVRDAEDAVRGLDGR 66
Query: 62 NGW----RVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS SR G RGR + +CYECGE GH+AR+C
Sbjct: 67 TICGRRVRVELSTGKSRNRFRGPPPRRGRPFHPEDRCYECGERGHYARDC 116
>gi|383850973|ref|XP_003701038.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Megachile
rotundata]
Length = 206
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L S ++ +LED F +G +R+VWVAR PPG+AF++F+D RDA+DAIR LDG+
Sbjct: 12 KVYVGDLGSSATKEELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRI 71
Query: 62 ---NGWRVELSHNSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFAREC-RLRG 110
RVE S+ R G G GR + +CYECGE GH+AR C RLR
Sbjct: 72 ICGRRARVEPSNGRRLRDRGYFRRGIGRLFHPEDRCYECGEKGHYARNCQRLRN 125
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + S+ +LED F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 8 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRT 67
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSGGS--DLKCYECGEPGHFAREC 106
RVE+S+ RG G R R D +CY+CG+ GH+AR+C
Sbjct: 68 ICGRRARVEMSNGGRGYGSRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L S ++++LED F +G +R+VWVAR PPG+AF++F+D RDA+DAIR LDG+
Sbjct: 12 KVYVGDLGSGATKQELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGRT 71
Query: 63 GW----RVELSHNSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECR 107
RVE S+ R G GR + +CYECGE GH+AR C+
Sbjct: 72 ICGRRARVEPSNGRRLRDRSYFRRGIGRLFHPEDRCYECGERGHYARNCQ 121
>gi|242002226|ref|XP_002435756.1| RSZp22 protein, putative [Ixodes scapularis]
gi|215499092|gb|EEC08586.1| RSZp22 protein, putative [Ixodes scapularis]
Length = 199
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 11/112 (9%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++ +LE+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 13 KVYVGELGNSGTKHELEESFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGKM 72
Query: 63 GW----RVELSHNSRGGGGGRGGGRG--RSGGSDLKCYECGEPGHFARECRL 108
RVELS G R RG R +CY+CGE GH+AR+CR+
Sbjct: 73 LCGRRVRVELST-----GKSRNSYRGSSRPFQPTDRCYDCGERGHYARDCRV 119
>gi|325303436|tpg|DAA34137.1| TPA_exp: alternative splicing factor SRp20/9G8 [Amblyomma
variegatum]
Length = 192
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 11/112 (9%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++ +LE+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 13 KVYVGELGNSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGKM 72
Query: 63 GW----RVELSHNSRGGGGGRGGGRG--RSGGSDLKCYECGEPGHFARECRL 108
RVELS G R RG R +CY+CGE GH+AR+CR+
Sbjct: 73 LCGRRVRVELST-----GKSRNSYRGSSRPFQPTDRCYDCGERGHYARDCRV 119
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 11/116 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L + S++D+E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 8 AKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGG-------SDLKCYECGEPGHFAREC 106
RVELS G GGG G G GG SD +CYECG GHFAR+C
Sbjct: 68 TISGRRARVELSTGRGGRGGGGGRGGPPRGGGKGGRFQSDDRCYECGGRGHFARDC 123
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R S+ KCYECGE GH+A +C
Sbjct: 71 LISGSRVRVELSTGMPRRSRYERAPTNRPFDSNDKCYECGERGHYAYDC 119
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R SD +CYECGE GH+A +C+
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPSD-RCYECGEKGHYAYDCQ 120
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%), Gaps = 13/118 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L + S++D+E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 8 AKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGG---------SDLKCYECGEPGHFAREC 106
RVELS G GGG GG G G SD +CYECG GHFAR+C
Sbjct: 68 TISGRRARVELSTGRGGRGGGGGGRGGPPRGGGKPGGRFQSDDRCYECGGRGHFARDC 125
>gi|221112060|ref|XP_002166312.1| PREDICTED: uncharacterized protein LOC100212585 isoform 1 [Hydra
magnipapillata]
Length = 218
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L + +LE EF G +R +WVAR PPG+ FI F+D RDA DA+RE+DG
Sbjct: 1 MSRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDG 60
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
K G +V + +RG G+ G +G GG + KCY CG+ GH +REC
Sbjct: 61 KRVCGSKVRVE-KARGPSNGQKGRQGGGGGRNEKCYNCGKVGHISREC 107
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVGNL S + DLE EF +G + +VWVA+ PPG+A+++F+D RDA DAI+ LDGK
Sbjct: 5 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
RVE SH G R+ +CY CGE GH+A +C L
Sbjct: 65 ELHGRRIRVERSHGMPRNRGSDRDRSRRAFHPSDRCYNCGETGHYAYDCDL 115
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA+DA++ +DGK
Sbjct: 17 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKL 76
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G RV + ++ GRG R + KCY+CG+ GH+A +C
Sbjct: 77 LCGSRVRVEMSTGLSRKGRGRLSRRQFDPNDKCYQCGDRGHYAYDC 122
>gi|242010923|ref|XP_002426207.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
gi|212510258|gb|EEB13469.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
Length = 173
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L S S+++LED F +G +R+VWVAR PPG+AF++F+D RDA DA+R LDG+
Sbjct: 12 KVYVGDLGSSASKQELEDAFGYYGPLRNVWVARNPPGFAFVEFEDPRDADDAVRGLDGRT 71
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSG--GSDLKCYECGEPGHFAREC 106
RVE S+ G RG R D +CYECGE GH+AR+C
Sbjct: 72 VCGRRVRVEPSNGMGGRRRDRGPPPRRGRPFNPDDRCYECGERGHYARDC 121
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 6/110 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + S+ +LED F +G +R+VWVAR PPG+AF++F+D RDA+DAIR LDG+
Sbjct: 8 KVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRT 67
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSGGS--DLKCYECGEPGHFAREC 106
RVE+S+ RG GG R R D +CY+CG+ GH+AR+C
Sbjct: 68 ICGRRARVEMSNGGRGYGGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 1 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 61 VICGSRVRVELSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 109
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 82/147 (55%), Gaps = 29/147 (19%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G+L SER+LE FR +G +R+VWVAR PPG+AF++F+D DA DA+RELDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 NGW----RVELSH--------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFA 103
RVELS N G G G R + +CYECGE GH+A
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGSRRMKPFDPADRCYECGERGHYA 129
Query: 104 RECRLRGG-----------SGRRRSRS 119
+CR RGG GRRRSRS
Sbjct: 130 YDCRRRGGGPGGQNGRSRPDGRRRSRS 156
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 18/123 (14%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G+L SER+LE FR +G +R+VWVAR PPG+AF++F+D DA DA+RELDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 NGW----RVELSH--------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFA 103
RVELS N G G G R + +CYECGE GH+A
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGSRRMKPFDPADRCYECGERGHYA 129
Query: 104 REC 106
+C
Sbjct: 130 YDC 132
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R SD +CYECGE GH+A +C+
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPSD-RCYECGEKGHYAYDCQ 120
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 AKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R SD +CYECGE GH+A +C+
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPARRPFDPSD-RCYECGEKGHYAYDCQ 120
>gi|348523061|ref|XP_003449042.1| PREDICTED: hypothetical protein LOC100708809 [Oreochromis
niloticus]
Length = 240
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA+DA++ +DGK
Sbjct: 17 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKV 76
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G RV + ++ GRG R + +CY+CG+ GH+A +C
Sbjct: 77 LCGSRVRVEMSTGLSRKGRGRPSRRQFDPNDRCYQCGDRGHYAYDC 122
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 82/149 (55%), Gaps = 31/149 (20%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G+L SER+LE FR +G +R+VWVAR PPG+AF++F+D DA DA+RELDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 NGW----RVELSH----------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGH 101
RVELS N G G G R + +CYECGE GH
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGGGARNGGGRDNGIGSRRMKPFDPTDRCYECGERGH 129
Query: 102 FARECRLRGG-----------SGRRRSRS 119
+A +CR RGG GRRRSRS
Sbjct: 130 YAYDCRRRGGGPGGPNGRSRPEGRRRSRS 158
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 235
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL++ + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA++ LDGK
Sbjct: 11 TKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R +D +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGLPRRSRYDRPPARCPFDPND-RCYECGEKGHYAYDC 119
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 20/125 (16%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G+L SER+LE FR +G +R+VWVAR PPG+AF++F+D DA DA+RELDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 NGW----RVELSH----------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGH 101
RVELS N G G G R + +CYECGE GH
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGGGARNGGGRDNGIGSRRMKPFDPTDRCYECGERGH 129
Query: 102 FAREC 106
+A +C
Sbjct: 130 YAYDC 134
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 71/118 (60%), Gaps = 13/118 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL S+ +LE EF FG ++SVW+AR P G+AF++++D RDA DA++++D
Sbjct: 33 KVYVGNLGESASKSELEKEFGRFGPLKSVWIARNPAGFAFVEYEDPRDASDAVKDMDSST 92
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSGGS---------DLKCYECGEPGHFARECR 107
RVELS G RGGG G G D KCYECGE GHFAR+C
Sbjct: 93 ICGQRARVELSSGDSRRRGFRGGGGGGGGSFRGGRGPPRGDSKCYECGETGHFARDCH 150
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Sarcophilus
harrisii]
Length = 235
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL++ + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA++ LDGK
Sbjct: 11 TKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R +D +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGLPRRSRYDRPPARCPFDPND-RCYECGEKGHYAYDC 119
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Papio
anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing factor,
arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d [Homo
sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
Length = 239
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Cricetulus
griseus]
Length = 227
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 2 QTKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDG 61
Query: 61 K----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
K + RVELS R R R R + +CYECGE GH+A +C
Sbjct: 62 KVICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 111
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus rotundus]
Length = 235
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 13 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 72
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 73 VICGSRVRVELSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 121
>gi|260826882|ref|XP_002608394.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
gi|229293745|gb|EEN64404.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
Length = 132
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 14/115 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVG+L +R +ER+L D F +G +R+VWVAR PPG+AF++F+D RDA+DA++ LD +
Sbjct: 16 CKVYVGDLGTRGNERELRDIFSYYGPLRNVWVARNPPGFAFVEFEDPRDAKDAVKHLDRR 75
Query: 62 N----GWRVELSHNSRGGGGGRGGGRGRSGGSDL------KCYECGEPGHFAREC 106
RVE+S GGG R +CYECGE GH+AR+C
Sbjct: 76 EICGAPARVEMS----TGGGRRSRYGPPPPYYRRPFDPLDRCYECGERGHYARDC 126
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|307103428|gb|EFN51688.1| hypothetical protein CHLNCDRAFT_139931 [Chlorella variabilis]
Length = 187
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 56/72 (77%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+++++GNL + +RD+ED F FG +RS WVAR+PPG+ F++++D RDA+DA+R DG
Sbjct: 1 MAKLWIGNLPPGIPDRDVEDVFAKFGRLRSCWVARKPPGFGFVEYEDRRDAEDAVRGTDG 60
Query: 61 KNGWRVELSHNS 72
KNGWRVE + +
Sbjct: 61 KNGWRVEFARAA 72
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R +D +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARCPFDPND-RCYECGEKGHYAYDC 119
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 19 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 79 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 127
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Canis
lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like [Ailuropoda
melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Felis
catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 233
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Papio
anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c [Homo
sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 20 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 80 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 128
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 19 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 79 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDCH 128
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 39 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 99 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 147
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 40 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 99
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 100 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 148
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a [Homo
sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R +D +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPARCPFDPND-RCYECGEKGHYAYDC 119
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 39 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 99 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 147
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Canis
lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Felis
catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 2 TKVYVGNLGTGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 62 VICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 110
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 19/124 (15%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L + S++++ED F +G +R+VWVAR PPG+AF++FDD RDA+D++R LDG+
Sbjct: 12 AKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFDDARDAEDSVRGLDGR 71
Query: 62 NGW----RVELS---------------HNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHF 102
RVELS GGG RG G + D +CYECG GH+
Sbjct: 72 TVCGRRVRVELSTGKGGRGFRGGGGGGGGGGGGGPPRGKGGRGAFNPDDRCYECGGRGHY 131
Query: 103 AREC 106
AR+C
Sbjct: 132 ARDC 135
>gi|47224788|emb|CAG06358.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +R+VWVAR PPG+AF++F+D RDA+DA++ +DGK
Sbjct: 15 KVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKL 74
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G RV + ++ GRG R + +CY+CG+ GH+A +C
Sbjct: 75 LCGSRVRVEMSTGLSRKGRGRPSRRQFDPNDRCYQCGDRGHYAYDC 120
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 6 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 65
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 66 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 114
>gi|281350478|gb|EFB26062.1| hypothetical protein PANDA_013342 [Ailuropoda melanoleuca]
Length = 120
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 2 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 62 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 110
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDCH 120
>gi|384248651|gb|EIE22134.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 797
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 87/150 (58%), Gaps = 39/150 (26%)
Query: 21 EFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG-KNGWRVELSHNSRGGGGGR 79
+F FG +RSVWVAR+PPG+AFI+++D RDA+DA+R+LDG GWRVE S RG GGGR
Sbjct: 19 QFIRFGTLRSVWVARKPPGFAFIEYEDVRDAEDAVRKLDGGPQGWRVEFSRKDRGPGGGR 78
Query: 80 GGGRGRSGG-------------SDLKCYECGEPGHFARECRLRGGSG------------- 113
GGGR G S++KCYECGE GHFAR+CR RGG G
Sbjct: 79 GGGRDDFRGGGGGGGGGGGGMRSEMKCYECGEMGHFARDCRARGGGGGGGGGGDRYGDRD 138
Query: 114 ------------RRRSRSPRYRRSPSYGRR 131
R SRSP RRSPSY R
Sbjct: 139 GGRRGRSRSPVRRAASRSPVRRRSPSYDAR 168
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 13/112 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++++D RDA+DA++ +DGK
Sbjct: 15 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDARDAEDAVKGMDGKV 74
Query: 62 ---NGWRVELSH----NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS+ SR G R R + +CY+CGE GH+A +C
Sbjct: 75 LCGARVRVELSNGMSRKSRYGRPSR-----RQFDPNDRCYQCGETGHYAYDC 121
>gi|417407851|gb|JAA50519.1| Putative splicing factor arginine/serine-rich 7 35kda isoform cra
b, partial [Desmodus rotundus]
Length = 123
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 2 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 62 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 110
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 1 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 60
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 61 ICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 108
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b [Homo
sapiens]
Length = 132
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++++D RDA+DA++ +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGMDGKV 75
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS SR GR R+ + +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRYGRPS--RRNFDPNDRCYQCGESGHYAYDC 122
>gi|410910550|ref|XP_003968753.1| PREDICTED: uncharacterized protein LOC101078845 [Takifugu rubripes]
Length = 222
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +R+VWVAR PPG+AF++F+D RDA+DA++ +DGK
Sbjct: 15 KVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKL 74
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G RV + ++ GRG R + +CY+CG+ GH+A +C
Sbjct: 75 LCGSRVRVEMSTGLSRKGRGRPSRRQFDPNDRCYQCGDRGHYAYDC 120
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDCH 120
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDCH 120
>gi|15928796|gb|AAH14857.1| Sfrs7 protein [Mus musculus]
Length = 226
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|350538991|ref|NP_001232123.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
gi|197127816|gb|ACH44314.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
Length = 250
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 44 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 103
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 104 VICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 152
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++++D RDA+DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS SR GR R + +CY+CGE GH+A +C
Sbjct: 76 LCGSRIRVELSTGMSRKSRYGRPS--RRHFDPNDRCYQCGESGHYAYDC 122
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 74/122 (60%), Gaps = 17/122 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L + S++++ED F +G +R+VWVAR PPG+AF++F+D RDA+D++R LDG+
Sbjct: 8 AKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 62 NGW----RVELSHNSRGGGGGRGGGR-----------GRSG--GSDLKCYECGEPGHFAR 104
RVELS G G G +SG D +CYECG GH+AR
Sbjct: 68 TICGRRARVELSTGKGGRGLRGGDRGGGDRGRGGPPSSKSGRFHPDDRCYECGGRGHYAR 127
Query: 105 EC 106
+C
Sbjct: 128 DC 129
>gi|291230089|ref|XP_002735000.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 182
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + ++ ++E F +G +R+VWVAR PPG+AF++F+D RDA DA R LD
Sbjct: 14 KVYVGDLGTNGTKHEIERAFSYYGPLRNVWVARNPPGFAFVEFEDPRDASDACRGLDKTK 73
Query: 63 GWRVEL-----SHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
VE+ S SR GR R S+ +CYECG+ GHFAR+C
Sbjct: 74 LCGVEIRAELSSGKSRWAKWGRPP--PRRSFSEERCYECGKRGHFARDC 120
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 26/129 (20%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVGNL S + DLE EF +G + +VWVA+ PPG+A+++F+D RDA DAI+ LDGK
Sbjct: 5 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSG------------------GSDLKCYECGEP 99
RVE SH G RG R R SD +CY CGE
Sbjct: 65 ELHGRRIRVERSH---GMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSD-RCYNCGET 120
Query: 100 GHFARECRL 108
GH+A +C L
Sbjct: 121 GHYAYDCDL 129
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 24/128 (18%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVGNL S + DLE EF +G + +VWVA+ PPG+A+++F+D RDA DAI+ LDGK
Sbjct: 13 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSDL-----------------KCYECGEPG 100
RVE SH G RG R R +CY CGE G
Sbjct: 73 ELHGRRIRVERSH---GMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETG 129
Query: 101 HFARECRL 108
H+A +C L
Sbjct: 130 HYAYDCDL 137
>gi|449274552|gb|EMC83653.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 197
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+ LDGK
Sbjct: 2 TKVYVGNLGTGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 61
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 62 IICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDC 110
>gi|194386188|dbj|BAG59658.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+ RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEGPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+A PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIAGNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|21749793|dbj|BAC03661.1| unnamed protein product [Homo sapiens]
Length = 137
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PP +AF++F+D RDA+DA+R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPRDAEDAVRGLDGK 70
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS R R R R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPAR-RPFDPNDRCYECGEKGHYAYDC 119
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + + ++LED F FG IR VWVARRPPG+AFI+F+D RDA+DA+R LDG
Sbjct: 11 KVYVGGLPNDATSQELEDAFHRFGRIRKVWVARRPPGFAFIEFEDSRDAEDAVRALDGTR 70
Query: 63 GW----RVELSHN-SRGGGGGRGGGRGRSGGSD 90
RVELSH R G GG RG SD
Sbjct: 71 ICGVRARVELSHGRRRNGAPDYGGSRGGRFSSD 103
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++V+VGNL S ERDL DEF FG + VWVAR PPG+AF+ F D RDA DA+RE+DGK
Sbjct: 7 TKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDAGDAVREIDGK 66
Query: 62 N----GWRVELSHN 71
+ WRVE+SH
Sbjct: 67 SIAGREWRVEVSHQ 80
>gi|291241385|ref|XP_002740592.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 179
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 9/113 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + + +LE F +G +R+VWV+R PPG+AFI+F+D RDA DAIR LD +
Sbjct: 12 KVYVGELGTNGTRHELEKAFSYYGPLRNVWVSRNPPGFAFIEFEDARDASDAIRGLDKRR 71
Query: 63 GW----RVELSHNSRGGGGGRGGGRG-----RSGGSDLKCYECGEPGHFAREC 106
RVELS GGG GG G R S+ +CYECG+ GHFAR+C
Sbjct: 72 VCGVEVRVELSSGKSRRGGGGGGRGGGRPPQRRSFSEERCYECGKHGHFARDC 124
>gi|224046923|ref|XP_002199213.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Taeniopygia
guttata]
Length = 223
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+ LDGK
Sbjct: 9 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 68
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 69 IICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDCH 118
>gi|71897353|ref|NP_001026539.1| serine/arginine-rich splicing factor 7 [Gallus gallus]
gi|53127360|emb|CAG31063.1| hypothetical protein RCJMB04_1p22 [Gallus gallus]
Length = 223
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+ LDGK
Sbjct: 9 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 68
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVE+S R R R R + +CYECGE GH+A +C
Sbjct: 69 IICGSRVRVEVSTGMPRRSRYDRPPAR-RPFDPNDRCYECGEKGHYAYDCH 118
>gi|432106513|gb|ELK32262.1| Serine/arginine-rich splicing factor 7 [Myotis davidii]
Length = 226
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G + +VW+AR PPG+AF+ F+D RDA+DA+R LDGK
Sbjct: 17 TKVYVGNLATGAGKGELERAFSYYGPLTTVWIARNPPGFAFVGFEDPRDAEDAVRGLDGK 76
Query: 62 ----NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R R R +D +CYECGE GH+A C
Sbjct: 77 VICDSRVRVELSTGMPRRSYLDRPPARHPFDPND-RCYECGEKGHYAYYCH 126
>gi|443725386|gb|ELU13009.1| hypothetical protein CAPTEDRAFT_155905 [Capitella teleta]
Length = 204
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVYVG+L S+R+LE F FG + VWVA+ PP +AFI + DA+DAIR+++G
Sbjct: 38 RVYVGDLGPDPSKRELEKLFEKFGPVMEVWVAKNPPCFAFIVYKHKEDAEDAIRDMNG-- 95
Query: 63 GWRVELS-HNSRGG-GGGRGGGRGRSGGSD--LKCYECGEPGHFAREC 106
VE+S H R R GR R G D ++CY CGE GHF+R+C
Sbjct: 96 ---VEVSGHRVRCSLALPRSRGRKRPSGFDPNMRCYSCGERGHFSRDC 140
>gi|291230091|ref|XP_002735001.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 227
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRV+VG+L S R++E F +G + VWVAR PP +AF+ F DA++A+ ++DG+
Sbjct: 44 SRVHVGDLGIDCSRREIEKAFAKYGKLYEVWVARNPPCFAFVVFKRSSDAEEAVHDMDGR 103
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSG-GSDLKCYECGEPGHFARECRLRGGSGRR 115
G RV +S R GRGR G +L+CY+CGE GHF+R+CR S +R
Sbjct: 104 MLCGGRVRVSL-----ARPRTQGRGRRGYDPNLRCYQCGERGHFSRDCRYYSRSYKR 155
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 19/129 (14%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL S S +LE+ F +G +++VWVAR PPG+AF+ F+D RDA DA + LD +N
Sbjct: 17 KVYVGNLPSGASRTELEEAFSRYGRVKNVWVARNPPGFAFVMFEDERDASDACKALDDRN 76
Query: 63 --GWRVELSHNS-----------------RGGGGGRGGGRGRSGGSDLKCYECGEPGHFA 103
G RV + +S GGGG GGR + +CYECG+ GHFA
Sbjct: 77 VCGVRVRVEMSSGESRRSRDRGDRGGDRGHRGGGGFMGGRRGGMRDNERCYECGQRGHFA 136
Query: 104 RECRLRGGS 112
R+C RG S
Sbjct: 137 RDCDRRGRS 145
>gi|209153932|gb|ACI33198.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 223
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +R+VWVAR PPG+AF++++D RDA+DA++ +DGK
Sbjct: 17 KVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEYEDARDAEDAVKGMDGKV 76
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ RVELS SR GR R +CY+CG+ GH+A +C
Sbjct: 77 LCGSRIRVELSTGMSRKTKHGRPSRRHFDPQD--RCYQCGDRGHYAYDC 123
>gi|221221656|gb|ACM09489.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 272
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++++D RDA+DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS SR R R + +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRHDRPS--RRHFDPNDRCYQCGENGHYAYDC 122
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 72/125 (57%), Gaps = 18/125 (14%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + + DLE F +G +RSVW+AR PPG+AF++F+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 GW----RVELSH--------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAR 104
RVELS GGGG G RG G D KCYECG GHFAR
Sbjct: 69 VCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFAR 128
Query: 105 ECRLR 109
CR R
Sbjct: 129 HCRER 133
>gi|71834670|ref|NP_001025438.1| serine/arginine-rich splicing factor 7 [Danio rerio]
gi|66911407|gb|AAH97250.1| Splicing factor, arginine/serine-rich 7 [Danio rerio]
Length = 178
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +RSVW+AR P G+AF++F+D RDA+D++R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGK 70
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDHPPSRRPFDPNDRCYECGEKGHYAYDCH 120
>gi|225711580|gb|ACO11636.1| Splicing factor, arginine/serine-rich 7 [Caligus rogercresseyi]
Length = 332
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R++V +LD S+RD+E F FG ++ +W+AR P +AF F DA+DA+R DG
Sbjct: 191 RIHVADLDVSASKRDMEKVFGKFGPLKEIWMARSVPCFAFCVFRYREDAEDAVRTSDGTE 250
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSG-GSDLKCYECGEPGHFARECRLRGGSGRRRSRS 119
+G R+ ++H R GRGR G +++CY+CG+ GHF+R+C G +R S
Sbjct: 251 VSGRRIRVTH-----ARPRTKGRGRRGFNPNMRCYQCGDRGHFSRDC-PDTKYGYKRPPS 304
Query: 120 PRY 122
PRY
Sbjct: 305 PRY 307
>gi|126631485|gb|AAI33852.1| Sfrs7 protein [Danio rerio]
Length = 210
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +RSVW+AR P G+AF++F+D RDA+D++R LDGK
Sbjct: 11 TKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGK 70
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ RVELS R + +CYECGE GH+A +C
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDHPPSRRPFDPNDRCYECGEKGHYAYDCH 120
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++++D RDA+DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS SR R R +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRHDRPSRRHFDPND--RCYQCGENGHYAYDC 122
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG+L + ++ +LE F +G +RSVWVAR PPG+AF++++D RDA+DA + +DGK
Sbjct: 16 KVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 62 ---NGWRVELSH-NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
RVELS SR R R +CY+CGE GH+A +C
Sbjct: 76 LCGARIRVELSTGMSRKSRHDRPSRRHFDPND--RCYQCGENGHYAYDC 122
>gi|47229637|emb|CAG06833.1| unnamed protein product [Tetraodon nigroviridis]
Length = 222
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ DLE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 KVYVGNLGNNGNKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 --GWRVELSHNS 72
G RV + H+S
Sbjct: 70 LCGCRVRVEHSS 81
>gi|410919593|ref|XP_003973268.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Takifugu
rubripes]
Length = 173
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL S ++ DLE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 18 KVYVGNLGSNGNKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDSRDATDAVRELDGRT 77
Query: 63 --GWRVELSHNS 72
G RV + H+S
Sbjct: 78 LCGCRVRVEHSS 89
>gi|225712646|gb|ACO12169.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 142
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL S+ +LED FR +G +RSVWVAR PPG+AF++F+D RDA+DA + LDG
Sbjct: 13 KVYVGNLGDNASKHELEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDASKALDGSR 72
Query: 63 --GWRVELSHNSRGGGGGRGGGR 83
G R + +SR R GGR
Sbjct: 73 ICGVRATVEMSSRKKRNRRVGGR 95
>gi|225714302|gb|ACO12997.1| Splicing factor, arginine/serine-rich 7 [Lepeophtheirus salmonis]
Length = 306
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R++V +LD ++RD+E F FG ++ +W+AR P +AF+ F DA+D +R DG
Sbjct: 164 RIHVADLDVSATKRDMEKVFGKFGPLKEIWMARSVPCFAFVVFRYREDAEDGVRSADGVE 223
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSG-GSDLKCYECGEPGHFARECRLRGGSGRRRSRS 119
+G R+ ++H R GRGR G +++CY+CG+ GHF+R+C G +R S
Sbjct: 224 ISGRRIRVTH-----ARPRTKGRGRRGFNPNMRCYQCGDRGHFSRDC-PDTKYGYKRPPS 277
Query: 120 PRY 122
PRY
Sbjct: 278 PRY 280
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 68/124 (54%), Gaps = 20/124 (16%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + + DLE F +G +RSVW+AR PPG+AF++F+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 GW----RVELSH----------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHF 102
RVELS GGG G G G D KCYECG GHF
Sbjct: 69 VCGRRARVELSTGKYARSGGGAGGGGGGGGGGGGAGGRDRGGAGGRGDDKCYECGGRGHF 128
Query: 103 AREC 106
AR C
Sbjct: 129 ARHC 132
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++LED F FG IR VWVARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 70/122 (57%), Gaps = 18/122 (14%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + + DLE F +G +RSVW+AR PPG+AF++F+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 GW----RVELSH--------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAR 104
RVELS GGGG G RG G D KCYECG GHFAR
Sbjct: 69 VCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFAR 128
Query: 105 EC 106
C
Sbjct: 129 HC 130
>gi|308492842|ref|XP_003108611.1| hypothetical protein CRE_10821 [Caenorhabditis remanei]
gi|308248351|gb|EFO92303.1| hypothetical protein CRE_10821 [Caenorhabditis remanei]
Length = 155
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NGWRVELSHN 71
EL N
Sbjct: 63 ESAEYELVSN 72
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++LED F FG IR VWVARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+N
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRN 74
Query: 63 ----GWRVELS 69
RVELS
Sbjct: 75 MCGCKLRVELS 85
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
S+VYVGNL S+ ++ED FR +G +RSVWVAR PPG+AF++F+D RDA+DA + LDG
Sbjct: 12 SKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDG 70
>gi|344244643|gb|EGW00747.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 161
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + ++ +LE +F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 CKVYVGNLGNNGNKTELEHDFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 62 N----GWRVELSHNSR 73
RVELS+ +
Sbjct: 70 TLCGCPVRVELSNGEK 85
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++LED F FG IR VWVARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + + E F +G +RSVW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 20 TKVYVGNLGTGAGKGEYERAFSYYGPLRSVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 62 ----NGWRVELS 69
+ RVELS
Sbjct: 80 VICGSRVRVELS 91
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++LED F FG IR VWVARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 71 ICGVRARVEISH 82
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VY+GNL+ + D+E F FG I ++WVARRPPG+AF+ F+D RDA DAI ELDG
Sbjct: 12 KVYIGNLNPEATVEDVESLFSKFGTIGNIWVARRPPGFAFVTFEDPRDATDAIEELDGSE 71
Query: 62 ---NGWRVELS 69
+VELS
Sbjct: 72 YKGQNLKVELS 82
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + ++LED F FG IR VWVARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 20 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 79
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 80 ICGVRARVEISH 91
>gi|56758208|gb|AAW27244.1| SJCHGC09413 protein [Schistosoma japonicum]
Length = 214
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 18/114 (15%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G+L SER+LE FR +G +R+VWVAR PPG+AF++F+D DA DA+RELDG
Sbjct: 10 TKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGT 69
Query: 62 NGW----RVELSH--------------NSRGGGGGRGGGRGRSGGSDLKCYECG 97
RVELS N G G G R + +CYECG
Sbjct: 70 VMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGSRRMKPFDPADRCYECG 123
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+GNL SR ++ D+E F +G IR+VWVAR PPG+AF++F+D RDA+DA++ LDG
Sbjct: 12 KVYIGNLGSRATKDDIEAVFSRYGPIRNVWVARNPPGFAFVEFEDSRDAEDAVKALDGTR 71
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 72 ICGARVRVEMSH 83
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+V+VGNL + + DLE+EFR FG + VWVAR+PPG+AF+ F+D RDA+DA++ L+ +
Sbjct: 47 QVFVGNLPDDIEKMDLENEFRQFGRLLDVWVARKPPGFAFVKFEDQRDAEDAVQGLNRRT 106
Query: 63 GW----RVELSH 70
+ RVE+SH
Sbjct: 107 AFGREIRVEISH 118
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NG----WRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + +++ED F FG IR VWVARRPPG+AF++F+D RDA+D+++ LDG
Sbjct: 11 KVYVGGLPQDATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTR 70
Query: 63 GW----RVELSH 70
RVELSH
Sbjct: 71 ICGVRARVELSH 82
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S ++ ++E F FG +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 8 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 67
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 68 LCGTRVRVEMSH 79
>gi|156354444|ref|XP_001623404.1| predicted protein [Nematostella vectensis]
gi|156210099|gb|EDO31304.1| predicted protein [Nematostella vectensis]
Length = 82
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M++VY+G+L S+R++E+EF +G ++ VWVAR PPG+AF FDD RDA+DA+RELDG
Sbjct: 1 MTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDG 60
Query: 61 K----NGWRVELSH 70
+ RVEL+
Sbjct: 61 RYICGQRVRVELAK 74
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NGW----RVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG++
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRS 74
Query: 63 GW----RVELSHNSR 73
RVELS+ R
Sbjct: 75 LCGCRVRVELSNGER 89
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELEHAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG++
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRS 70
Query: 63 GW----RVELSHNSR 73
RVELS+ R
Sbjct: 71 LCGCRVRVELSNGER 85
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S ++ ++E F FG +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 8 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 67
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 68 LCGTRVRVEMSH 79
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NG----WRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG++
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRS 70
Query: 63 GW----RVELSHNSR 73
RVELS+ R
Sbjct: 71 LCGCRVRVELSNGER 85
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NG----WRVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S ++ ++E F FG +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 28 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 87
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 88 LCGTRVRVEMSH 99
>gi|156350420|ref|XP_001622275.1| hypothetical protein NEMVEDRAFT_v1g141804 [Nematostella
vectensis]
gi|156208771|gb|EDO30175.1| predicted protein [Nematostella vectensis]
Length = 98
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVGNL +LE F FG + VWVAR PPG+AF++++DYRDA++A+RELDG
Sbjct: 3 TKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDGA 62
Query: 62 N----GWRVELSHN 71
N RVE S+N
Sbjct: 63 NVCDRTIRVEFSNN 76
>gi|148680433|gb|EDL12380.1| mCG2011 [Mus musculus]
Length = 156
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSHNSR 73
RVELS++ +
Sbjct: 71 LCGCRVRVELSNDEK 85
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
S+VYVGNL S+ ++ED FR +G +RSVWVAR PPG+AF++F+D RDA+DA + LDG
Sbjct: 10 SKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDG 68
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
S+VYVGNL S+ ++ED FR +G +RSVWVAR PPG+AF++F+D RDA+DA + LDG
Sbjct: 10 SKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDG 68
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG+
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDACRSLDGQR 71
Query: 62 ---NGWRVELS 69
RVE+S
Sbjct: 72 CCGTRIRVEMS 82
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S ++ ++E F FG +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 8 KVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSR 67
Query: 62 ---NGWRVELSH 70
RVE+SH
Sbjct: 68 LCGTRVRVEMSH 79
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 39 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 96
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 G----WRVELSH 70
RVELS+
Sbjct: 75 LSGSRVRVELSN 86
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|391339283|ref|XP_003743981.1| PREDICTED: uncharacterized protein LOC100904514 [Metaseiulus
occidentalis]
Length = 218
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+GNL + S D+E F +G +R+VWVAR PPG+AF++FDD RDA+DA R LDG +
Sbjct: 149 KVYIGNLANHTSRHDIESAFGKYGSLRNVWVARNPPGFAFVEFDDSRDAEDACRALDGSS 208
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
Length = 151
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Monodelphis domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like
[Ailuropoda melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus
scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla
gorilla gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus
rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|209154702|gb|ACI33583.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 G----WRVELSH 70
RVELS+
Sbjct: 75 LSGSRVRVELSN 86
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 G----WRVELSH 70
RVELS+
Sbjct: 75 LSGCRVRVELSN 86
>gi|209147621|gb|ACI32898.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 G----WRVELSH 70
RVELS+
Sbjct: 75 LSGSRVRVELSN 86
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 G----WRVELSH 70
RVELS+
Sbjct: 75 LSGSRVRVELSN 86
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 47/58 (81%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S S+ +LE +F +G +R++WVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHELEGKFSKYGPLRNIWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 14 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 73
Query: 63 GW----RVELS 69
RVELS
Sbjct: 74 MCGCRVRVELS 84
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + +++ED F FG IR VWVARRPPG+AF++F+D RDA+D+++ LDG
Sbjct: 11 KVYVGGLPQDATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTR 70
Query: 63 GW----RVELSH 70
RVELSH
Sbjct: 71 ICGVRARVELSH 82
>gi|355561641|gb|EHH18273.1| hypothetical protein EGK_14839 [Macaca mulatta]
Length = 164
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL S+ S+ +LE F +G +++VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 12 KVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNRDAEDAVRALDGRT 71
Query: 63 GW----RVELS 69
RVE+S
Sbjct: 72 VCGVRARVEMS 82
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 KVYVGNLGNNGNKSELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 70 LCGCRVRVELSN 81
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVG L R S +LE+ F FG +R+VWVARRP G+AF++F+D RDA DA+R+LDG
Sbjct: 36 CKVYVGGLPERASRGELEEIFGRFGPLRNVWVARRPWGFAFVEFEDARDAIDAVRQLDGS 95
Query: 62 NGW----RVELSHNSRGGGGGRGGGRGRSGG 88
RVELSH R G RG R GG
Sbjct: 96 RMCGVRARVELSHGQRRNRGPRGYDDERRGG 126
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial
[Desmodus rotundus]
Length = 116
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 3 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 62
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 63 LCGCRVRVELSN 74
>gi|348507887|ref|XP_003441487.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Oreochromis niloticus]
Length = 165
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 GW----RVELS 69
RVELS
Sbjct: 70 LCGCRVRVELS 80
>gi|281338419|gb|EFB14003.1| hypothetical protein PANDA_002213 [Ailuropoda melanoleuca]
Length = 114
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSHNSR 73
RVELS+ +
Sbjct: 71 LCGCRVRVELSNGEK 85
>gi|405965541|gb|EKC30907.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 280
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RV+V +L S+RDLE F FG + VWVAR PP +AFI + DA+ A+RE+DGK
Sbjct: 35 RVHVADLGIDPSKRDLERAFEKFGPLIEVWVARNPPCFAFIVYKYREDAEKALREMDGKP 94
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ S G R R +L+CY CGE GHF+R+C
Sbjct: 95 LSGGRIRCSL----ARPRTRGRRRRGFDPNLRCYTCGEKGHFSRDC 136
>gi|148690657|gb|EDL22604.1| mCG21131, isoform CRA_b [Mus musculus]
Length = 129
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSHNSR 73
RVELS+ +
Sbjct: 71 LCGCRVRVELSNGEK 85
>gi|119624305|gb|EAX03900.1| splicing factor, arginine/serine-rich 3, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSHNSR 73
RVELS+ +
Sbjct: 71 LCGCRVRVELSNGEK 85
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 75 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 134
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 135 LCGCRVRVELSN 146
>gi|50344760|ref|NP_001002053.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
gi|47940341|gb|AAH71322.1| Splicing factor, arginine/serine-rich 3a [Danio rerio]
Length = 174
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 63 GW----RVELSH 70
RVE+S+
Sbjct: 75 LCGCRVRVEMSN 86
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 62 NGW----RVELSH 70
RVELS+
Sbjct: 70 TLCGCRVRVELSN 82
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRVRVEMSN 83
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NGW----RVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|391339219|ref|XP_003743949.1| PREDICTED: RNA-binding protein 1-like [Metaseiulus occidentalis]
Length = 78
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+GNL + S D+E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG +
Sbjct: 11 KVYIGNLANHTSRHDIEAAFGKYGSLRNVWVARNPPGFAFVEFEDSRDAEDAVRALDGSS 70
Query: 63 G 63
Sbjct: 71 S 71
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|148223201|ref|NP_001080460.1| serine/arginine-rich splicing factor 3 [Xenopus laevis]
gi|28302173|gb|AAH46661.1| Sfrs3-prov protein [Xenopus laevis]
Length = 191
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDLRDAADAVRELDGR 69
Query: 62 NGW----RVELSH 70
RVELS+
Sbjct: 70 TLCGCRVRVELSN 82
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++YVGNL ++ ++E+ F FG +R+VWVAR PPG+A+++F+D+RDA+DA++ L+GK
Sbjct: 13 KIYVGNLPPGAAKHEIEERFSDFGRLRNVWVARNPPGFAYVEFEDHRDARDAVKSLNGKM 72
Query: 63 GW----RVELSHNSR 73
RVE SH R
Sbjct: 73 ICGVRSRVEFSHGMR 87
>gi|291230087|ref|XP_002734999.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 315
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L S+ ++E F FG I VWVAR PP +AF+ + DA++A+RE+DG+
Sbjct: 63 TRLYVGDLGIDCSKTEIERSFGRFGKITEVWVARNPPCFAFVVYKRREDAEEAMREMDGR 122
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
G RV ++ G R +L+CY+CGE GHF+R+CR
Sbjct: 123 MVCGGRVRVN----IARPRTRGRGRRGFDPNLRCYQCGERGHFSRDCR 166
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F FG +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKFGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 70
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+GNL + S D+E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 11 KVYIGNLANHTSRHDIESAFGKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRALDGSR 70
Query: 63 --GWRV--ELSH 70
G RV E+SH
Sbjct: 71 ICGSRVKCEMSH 82
>gi|348521764|ref|XP_003448396.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Oreochromis niloticus]
Length = 168
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 74
Query: 63 GW----RVELS 69
RVELS
Sbjct: 75 MCGCRVRVELS 85
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 70 LCGCRVRVELSN 81
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NGW----RVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding
protein srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 62 NGW----RVELS 69
RVELS
Sbjct: 63 RICGVRARVELS 74
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 69
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 70 LCGCRVRVELSN 81
>gi|149043497|gb|EDL96948.1| rCG61099, isoform CRA_a [Rattus norvegicus]
Length = 129
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSHNSR 73
RVELS+ +
Sbjct: 71 LCGCRVRVELSNGEK 85
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGT 70
>gi|432959076|ref|XP_004086176.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oryzias
latipes]
Length = 168
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +R+VWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 15 KVYVGNLGNNGNKTELERAFGYYGPLRTVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 74
Query: 63 GW----RVELS 69
RVELS
Sbjct: 75 MCGCRVRVELS 85
>gi|148684205|gb|EDL16152.1| mCG21910 [Mus musculus]
Length = 163
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 KVYVGNLGNNGNKTELEWAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRT 69
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 70 LCGCRVRVELSN 81
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 47 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 106
Query: 62 NGW----RVELSHNSR 73
RVELS+ +
Sbjct: 107 TLCGCRVRVELSNGEK 122
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRVRVEMSN 83
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG L + +++ED F +G IR VWVARRPPG+AF++F+D RDA+D+++ LDG
Sbjct: 11 KVYVGGLPQDATSQEVEDAFSRYGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTR 70
Query: 63 GW----RVELSH 70
RVELSH
Sbjct: 71 ICGVRARVELSH 82
>gi|402869670|ref|XP_003898873.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Papio
anubis]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AFI+F+D DA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFIEFEDPPDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|354472430|ref|XP_003498442.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Cricetulus griseus]
Length = 167
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + ++ +L+ F +G +RSVWVAR PPG+ F+ F+D RDA DA+RELDGK
Sbjct: 11 KVYVGNLGNNANKTELKWAFGYYGPLRSVWVARNPPGFVFVKFEDPRDATDAVRELDGKR 70
Query: 62 -NGWRVEL 68
+G RV++
Sbjct: 71 LSGCRVKM 78
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGTR 71
Query: 62 ---NGWRVELS 69
RVE+S
Sbjct: 72 CCGTRIRVEMS 82
>gi|442751175|gb|JAA67747.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF +F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFAEFEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|332018153|gb|EGI58759.1| Splicing factor, arginine/serine-rich 7 [Acromyrmex echinatior]
Length = 221
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 48/59 (81%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVG+L S S++ LED F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG+
Sbjct: 66 KVYVGDLGSSASKQQLEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 124
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRVRVEMSN 83
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 70
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S + ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 13 KVYVGNLGSNAARGEIEEAFSKYGTLRNVWVARNPPGFAFVEFEDPRDAEDAVRALDG 70
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+GNL + S D+E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R +DG
Sbjct: 11 KVYIGNLATHASRHDVESVFSKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRAVDGSR 70
Query: 63 --GWRV--ELSH 70
G RV E+SH
Sbjct: 71 ICGSRVKCEMSH 82
>gi|358335617|dbj|GAA32504.2| serine/arginine-rich splicing factor 7, partial [Clonorchis
sinensis]
Length = 145
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 16/114 (14%)
Query: 14 SERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGW----RVELS 69
S+R++E FR +G +++VWVAR PPG+AF++F+D DAQ+A+RELDG RVELS
Sbjct: 3 SDREIERIFRDYGRLKNVWVARNPPGFAFVEFEDLADAQEAVRELDGTVMCGVRARVELS 62
Query: 70 H------------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGG 111
GGG GG RGR +CYECGE GH+A +CR R G
Sbjct: 63 SGKSRQKPWLRGGVRDGGGRDFGGRRGRPFDPSDRCYECGERGHYAYDCRRRNG 116
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +++VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLKNVWVARNPPGFAFVEFEDRRDAEDATRALDGT 70
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+REL+G+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELNGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|313242504|emb|CBY34644.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 2 SRVYVGNLDSRV-SERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
S+VY+GNL S S ++E E +G + SVW+ARRPPG+ +++F+D RDA+DAIR+LDG
Sbjct: 10 SKVYLGNLGSHPPSTAEVEKEMGYYGKLVSVWIARRPPGFGYVEFEDPRDAKDAIRDLDG 69
Query: 61 KNGW----RVELSH 70
+ + +VELSH
Sbjct: 70 RTVFGRRLKVELSH 83
>gi|313226285|emb|CBY21429.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 2 SRVYVGNLDSRV-SERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
S+VY+GNL S S ++E E +G + SVW+ARRPPG+ +++F+D RDA+DAIR+LDG
Sbjct: 10 SKVYLGNLGSHPPSTAEVEKEMGYYGKLVSVWIARRPPGFGYVEFEDPRDAKDAIRDLDG 69
Query: 61 KNGW----RVELSH 70
+ + +VELSH
Sbjct: 70 RTVFGRRLKVELSH 83
>gi|339521945|gb|AEJ84137.1| splicing factor [Capra hircus]
Length = 124
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDGK
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAGDAVRELDGKT 70
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii
yoelii]
Length = 309
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S V+ RD+E+EFR FG I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSRGGGGGRGGGRGRSG 87
D G N RVE+ N+R G GRG G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNGKYNSRGRGMMG 99
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VY+GNL S ++ ++ED F +G ++++W+AR PPG+AFI+++D RDA+DA+R LDG
Sbjct: 12 KVYIGNLKSNANKYEIEDLFTKYGPLKNIWIARNPPGFAFIEYEDPRDAEDAVRGLDG 69
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S V+ RD+E+EFR FG I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSRGGGGGRGGGRGRSG 87
D G N RVE+ N+R G GRG G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNGKYNSRGRGMMG 99
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL S S+ ++E+ F +G +R+VW+AR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKFEIENAFNKYGPLRNVWIARNPPGFAFVEFEDRRDAEDATRALDGTR 71
Query: 62 ---NGWRVELS 69
RVE+S
Sbjct: 72 CCGTRIRVEMS 82
>gi|444723316|gb|ELW63974.1| Serine/arginine-rich splicing factor 7 [Tupaia chinensis]
Length = 123
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 47/60 (78%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 64 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 123
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+R+LDG+
Sbjct: 75 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRDLDGRT 134
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 135 LCGCRVRVELSN 146
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR+PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARKPPGFAFVEFEDPRDAEDAVRGLDGT 70
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR+PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARKPPGFAFVEFEDPRDAEDAVRGLDGT 70
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGT 70
>gi|443725388|gb|ELU13011.1| hypothetical protein CAPTEDRAFT_223451 [Capitella teleta]
Length = 154
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++YVG+L SER+LE F +G +++VWVAR PPG+AFI+++D RDA DA+R LDG
Sbjct: 13 KIYVGDLPRDASERELERAFSYYGPLKNVWVARNPPGFAFIEYEDPRDADDAVRSLDGST 72
Query: 63 --GWRVELSHNS 72
G R + H++
Sbjct: 73 ICGVRARVEHST 84
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 13 KVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 71
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++FDD RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFDDRRDAEDATRGLDGT 70
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGNSASKHEIETAFSKYGPLRNVWVARNPPGFAFVEFEDSRDAEDAVRGLDGT 70
>gi|344284955|ref|XP_003414230.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
Length = 170
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL ++ +LE F +G +RSVWVAR PG+AF++F+D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGKNGNKTELEQAFGYYGPLRSVWVARNAPGFAFVEFEDPRDAADAVRELDGRT 70
Query: 63 ----GWRVELSH 70
RVELS+
Sbjct: 71 LCGCCVRVELSN 82
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S V+ RD+E+EFR FG I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSRGGGGGRGGGRGRSG 87
D G N RVE+ N+R G GRG G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNGKYSSRGRGMMG 99
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 101
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 47/58 (81%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S S+ ++E +F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGSSASKHEIEGKFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
>gi|340368163|ref|XP_003382622.1| PREDICTED: hypothetical protein LOC100636732 [Amphimedon
queenslandica]
Length = 172
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L + LE EF FG ++SVWVAR PPG+AF++F+D RDA++AIRELDGK
Sbjct: 3 TKVYVGELGENGDKGVLEREFERFGTLKSVWVARNPPGFAFVEFEDPRDAEEAIRELDGK 62
>gi|197210363|gb|ACH48189.1| alternative splicing factor SRp20/9G8 [Haplopelma schmidti]
Length = 139
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+ ++VG L+ + + DLE EF FG + VWVAR PPG+AFI+FDD DA +AIRE++G
Sbjct: 4 TSIFVGGLNDSIDKEDLEREFSKFGKLNHVWVARNPPGFAFIEFDDDEDANEAIREMNGA 63
Query: 62 --NG--WRVELSHNS 72
NG RV++S N+
Sbjct: 64 TINGSEIRVDMSRNN 78
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 47/59 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VY+GNL + S+ +LED F +G +++VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 101
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 47/59 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VY+GNL + S+ +LED F +G +++VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKHEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+V VGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+
Sbjct: 10 CKVCVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 62 NGW----RVELSH 70
RVELS+
Sbjct: 70 TLCGCRVRVELSN 82
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 101
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 47/59 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VY+GNL + S+ +LED F +G +++VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
>gi|237843959|ref|XP_002371277.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
gi|211968941|gb|EEB04137.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
Length = 171
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VY+G +++ + +LE F +G I +VWVAR PPG+AF+ FDDYRDA+DA+ ELDG
Sbjct: 13 KVYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 70
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 43 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 101
>gi|221483766|gb|EEE22078.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 184
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VY+G +++ + +LE F +G I +VWVAR PPG+AF+ FDDYRDA+DA+ ELDG
Sbjct: 8 KVYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 65
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 16 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 74
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 16 KVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGT 74
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG+L E++LE F +G ++SVWVAR PPG+AF++F+D RDA D++R LDG
Sbjct: 30 TKVYVGDLPRDAQEKELERAFSYYGPLKSVWVARNPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 62 NGW----RVELS 69
+ RVELS
Sbjct: 90 SLCGTRVRVELS 101
>gi|119389969|pdb|2HVZ|A Chain A, Solution Structure Of The Rrm Domain Of Sr Rich Factor
9g8
Length = 101
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK
Sbjct: 2 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 61
Query: 62 ---NGWRVELS 69
+ RVELS
Sbjct: 62 ICGSRVRVELS 72
>gi|24645765|ref|NP_524307.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|195499861|ref|XP_002097127.1| GE26048 [Drosophila yakuba]
gi|7299363|gb|AAF54555.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|194183228|gb|EDW96839.1| GE26048 [Drosophila yakuba]
gi|384217|prf||1905314A RNA-binding protein
Length = 135
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGT 70
>gi|326431779|gb|EGD77349.1| Rsf1 [Salpingoeca sp. ATCC 50818]
Length = 89
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RVYVG L +R+LE EF FG ++ VWVAR+PPG+AFI+F++ DA+DA+RELDG+
Sbjct: 6 RVYVGGLPDDADKRELEAEFSKFGRLQDVWVARKPPGFAFIEFENDMDARDAVRELDGRE 65
Query: 62 ---NGWRVELS 69
N RVE++
Sbjct: 66 LCGNRVRVEIA 76
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++++D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKVFSKYGSIRNVWVARNPPGFAFVEYEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S V+ RD+E+EFR FG I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 VSRIYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 DGK----NGWRVELSHNSRGGGG 77
DG N RVE+ N+R G
Sbjct: 67 DGCDFGGNKLRVEVPFNARANGN 89
>gi|343960046|dbj|BAK63877.1| splicing factor, arginine/serine-rich 3 [Pan troglodytes]
Length = 124
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++ +D RDA DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVESEDPRDAADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 LCGCRVRVELSN 82
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+GNL S ++ ++E EF +G ++ VW+AR PPG+AF+ FDD DAQDA+ LDG+
Sbjct: 5 TRVYIGNLGSGAAKHEIEKEFARYGPLKDVWIARNPPGFAFVVFDDPLDAQDAVEALDGR 64
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 11 CKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 24/114 (21%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
VYVG L SR ERDLED F +G +IR A GYAFI+++D RDA DA+R +DG
Sbjct: 8 VYVGRLSSRTRERDLEDAFSKYGRIIRLDMKA----GYAFIEYNDSRDADDAVRGMDGND 63
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR--LRGGS 112
+G R+ + + RG G +C+ CG+ GH+AR+CR RGGS
Sbjct: 64 LDGARISVEPSHRGEG---------------RCFSCGKEGHWARDCREGPRGGS 102
>gi|288806618|gb|ADC54214.1| RE57382p [Drosophila melanogaster]
Length = 178
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 55 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 112
>gi|307106194|gb|EFN54441.1| hypothetical protein CHLNCDRAFT_135849 [Chlorella variabilis]
Length = 242
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 27/132 (20%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+ G LD R+ ++DLE EF +G + +VW+AR PPG+ F+ D RDA DA+ LDGK
Sbjct: 6 TRVFCGGLDDRIQQQDLEAEFGKYGKVEAVWIARNPPGFGFVTMVDDRDADDAVAALDGK 65
Query: 62 NGWRVELSHNSR---------------------------GGGGGRGGGRGRSGGSDLKCY 94
NGW+VE + SR GGGGG GG R KCY
Sbjct: 66 NGWKVERARPSRREGGFGGGRGGGGCGGGGGGYGGDRYDGGGGGGGGYGDRPAYGQSKCY 125
Query: 95 ECGEPGHFAREC 106
CGE GHFAREC
Sbjct: 126 ACGEIGHFAREC 137
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGSNASKHEIEAAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +++VW+AR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLKNVWIARNPPGFAFVEFEDRRDAEDATRALDGT 70
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|296224036|ref|XP_002757876.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Callithrix jacchus]
Length = 163
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + S+ +LE F + +RSVWVAR PPG+AF++F+D RDA DA++ELDG+
Sbjct: 11 KVYVGNLGNNGSKTELERAFGYYRPLRSVWVARNPPGFAFVEFEDSRDAADAVQELDGRT 70
Query: 63 GW----RVELSH 70
+VELS+
Sbjct: 71 VCSCRVKVELSN 82
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVWVA PPG+AFI+F++ +A+ A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNGQ 66
Query: 62 N----GWRVELSH---NSRGG 75
+ RVE+S N RGG
Sbjct: 67 DILGSKLRVEISKGRRNPRGG 87
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+V+VG L + S +LE+ F +G I+ VW+ARRPPG+AFI+F+D RDA+DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFIEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|399218813|emb|CCF75700.1| unnamed protein product [Babesia microti strain RI]
Length = 117
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 11/78 (14%)
Query: 3 RVYVG-------NLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAI 55
+VYVG NL+ + LE F FG I ++WVARRPPG+AF+ F+D+RDA DA+
Sbjct: 11 KVYVGKIKLNSGNLNPNTTSEQLEGIFAKFGTIATIWVARRPPGFAFVTFEDHRDAHDAV 70
Query: 56 RELDGK----NGWRVELS 69
EL+ N +VELS
Sbjct: 71 EELNRTEFQGNSLKVELS 88
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E+ F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG
Sbjct: 12 KVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 45/58 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL + + DLE F +G +++VWVAR PPG+AF++++D RDA+DA+R +DG
Sbjct: 12 KVYVGNLGNNTARGDLEASFSKYGALKNVWVARNPPGFAFVEYEDPRDAEDAVRAMDG 69
>gi|449672680|ref|XP_004207768.1| PREDICTED: uncharacterized protein LOC100212585 isoform 2 [Hydra
magnipapillata]
Length = 179
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L + +LE EF G +R +WVAR PPG+ FI F+D RDA DA+RE+DG
Sbjct: 1 MSRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDG 60
Query: 61 K 61
K
Sbjct: 61 K 61
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+V+VG L + S +LE+ F +G I+ VW+ARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 10 CKVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 62 NGW----RVELSH 70
RVE SH
Sbjct: 70 RICGVRPRVEFSH 82
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+V+VG L + S +LE+ F +G I+ VW+ARRPPG+AFI+F+D RDA+DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFIEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL + S+ +LE F +G +R+VWVAR PPG+AFI+F+D RDA+DA+R LDG
Sbjct: 12 KVYVGNLGNNGSKYELECIFSKYGPLRNVWVARNPPGFAFIEFEDPRDAEDAVRGLDG 69
>gi|47028307|gb|AAT09086.1| splicing factor [Bigelowiella natans]
Length = 194
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVGNLD +RDLED FR G I + W+AR PPG+ F+ F+D DA+DAI++LDG+
Sbjct: 11 TKVYVGNLDRSTDKRDLEDFFRDSGKIVATWIARNPPGFGFVTFEDPYDAKDAIKDLDGR 70
>gi|351697385|gb|EHB00304.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
Length = 87
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL + ++ +L+ F +G +RSVWVAR PPG+AF++F+D R + DA+RELDG+
Sbjct: 11 KVYVGNLGNNGNKTELDRAFGYYGPLRSVWVARNPPGFAFVEFEDPRASADAVRELDGRT 70
Query: 63 GW----RVELSH 70
RVELS+
Sbjct: 71 SCGCRVRVELSN 82
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+V+VG L + S +LE+ F +G I+ VW+ARRPPG+AF++F+D RDA+DA++ LDG
Sbjct: 11 KVFVGGLPNDASSEELEEAFSKYGRIKKVWLARRPPGFAFVEFEDSRDAEDAVKGLDGTR 70
Query: 63 GW----RVELSH 70
RVE SH
Sbjct: 71 ICGVRPRVEFSH 82
>gi|428672140|gb|EKX73055.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 158
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
R+YVGNL+ + ++ F FG++ +VWVARRPPG+AF+ F+D RDA DAI EL+G+
Sbjct: 12 RLYVGNLNEDTTTDQIDSLFSRFGILTNVWVARRPPGFAFVTFEDPRDASDAIAELNGR 70
>gi|241648488|ref|XP_002410067.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215501503|gb|EEC10997.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 241
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG- 60
+RV+VG L +++ +LE EF +G + VWVA+ PPG+AF++FDD RDA +AIR+++G
Sbjct: 77 TRVFVGGLGDNMAKEELEREFSKYGHLSQVWVAQNPPGFAFVEFDDDRDANEAIRQMNGF 136
Query: 61 -KNGWRVELSHN 71
NG ++ + H+
Sbjct: 137 VLNGCKLRVEHS 148
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+V+VG L + ++LE+ F +G IR VW+ARRPPG+AFI+F+D RDA DA++ L+G
Sbjct: 16 KVFVGGLPHDATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDAVKALNGAR 75
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 76 ICGVRPRVEISH 87
>gi|158224|gb|AAA28850.1| RNA binding protein [Drosophila melanogaster]
Length = 135
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA LDG
Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATAALDGT 70
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L + + DLE F +G +RSVW+AR PPG+AF++F+ RDA DA+R LDG+
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 63 GW----RVELS 69
RVELS
Sbjct: 69 VCGRRARVELS 79
>gi|209737830|gb|ACI69784.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
gi|209738644|gb|ACI70191.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG++ + + DLE EF +G +RSVWVA RPP + F+++ D RDA+DA++ +DGK
Sbjct: 17 KVYVGDIVNGATMCDLEREFSQYGPLRSVWVA-RPPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
W VEL+ ++ +C +CG GH+A C
Sbjct: 76 VWGSRIHVELARKAKHDHPS-----NHHIDPQGRCNQCGNRGHYAYNC 118
>gi|340503359|gb|EGR29956.1| hypothetical protein IMG5_145470 [Ichthyophthirius multifiliis]
Length = 221
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
++YV N SR +E DL+ EF+ +G I + + R YAFI +DDY A+DAIR++D
Sbjct: 7 QIYVTNFSSRTNEEDLQYEFKKYGSIVDINMKR---SYAFITYDDYHSAEDAIRKMDKAV 63
Query: 62 -NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRSRSP 120
NG ++ + G R R D KC++CG GH+A EC RRR R
Sbjct: 64 INGKQILVE------PAGLKKIRPRGPQLDDKCFKCGRRGHWANEC-----DERRRYRRD 112
Query: 121 RYRRSPS 127
RS S
Sbjct: 113 SISRSES 119
>gi|209735146|gb|ACI68442.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG++ + + DLE EF +G +RSVWVA RPP + F+++ D RDA+DA++ +DGK
Sbjct: 17 KVYVGDIVNGATMCDLEREFSQYGPLRSVWVA-RPPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
W VEL+ ++ +C +CG GH+A C
Sbjct: 76 VWGSRIHVELARKAKHDHPS-----NHHIDPQGRCNQCGNRGHYAYNC 118
>gi|170035265|ref|XP_001845491.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877141|gb|EDS40524.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 197
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVWVA PPG+AFI+F++ +A+ A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNGQ 66
Query: 62 N----GWRVELSH 70
+ RVE+S
Sbjct: 67 DILGSKLRVEISK 79
>gi|209738068|gb|ACI69903.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 158
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG++ + + DLE EF +G +RSVWVA RPP + F+++ D RDA+DA++ +DGK
Sbjct: 17 KVYVGDIVNGATMCDLEREFSQYGPLRSVWVA-RPPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 63 GW----RVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
W VEL+ ++ +C +CG GH+A C
Sbjct: 76 VWGSRIHVELARKAKHDHPS-----NHHIDPQGRCNQCGNRGHYAYNC 118
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S V+ RD+E+EFR +G I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 ISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSRGGG 76
D G N RVE+ N+R G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNG 88
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+V+VG L + ++LE+ F +G IR VW+ARRPPG+AFI+F+D RDA DA++ L+G
Sbjct: 11 KVFVGGLPHDATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDAVKALNGAR 70
Query: 63 GW----RVELSH 70
RVE+SH
Sbjct: 71 ICGVRPRVEISH 82
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S VS RD+E+EFR +G I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 ISRIYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 DGK----NGWRVELSHNSRGGG 76
DG N RVE+ N+R G
Sbjct: 67 DGSDYGGNKLRVEVPFNARDNG 88
>gi|358253767|dbj|GAA53754.1| RNA-binding protein 1, partial [Clonorchis sinensis]
Length = 1238
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 12 RVFIGGVDPRVGKVDIEREFDRFGPIADVWVARNPPGFAFIVFKYADDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSRGGGGG 78
+ RVE + N+ GG
Sbjct: 72 PFGSRLRVEHAVNTSKTNGG 91
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi
strain B]
Length = 316
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S V+ RD+E+EFR +G I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 ISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 D----GKNGWRVELSHNSRGGG 76
D G N RVE+ N+R G
Sbjct: 67 DGCDFGGNKLRVEVPFNARDNG 88
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVGNL + S+ ++E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG
Sbjct: 12 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 71
Query: 62 ---NGWRVELSH 70
RVE+S+
Sbjct: 72 CCGTRIRVEMSN 83
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L + R+++D F +G + ++WVAR PPG+AF+DF+D RDA DAIR +DG+
Sbjct: 3 TRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 62 NGW----RVELS 69
+ RVEL+
Sbjct: 63 DFLGGRIRVELA 74
>gi|158299891|ref|XP_319902.4| AGAP009142-PA [Anopheles gambiae str. PEST]
gi|157013736|gb|EAA43387.4| AGAP009142-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVWVA PPG+AFI+F++ +A+ A L+G+
Sbjct: 10 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAETACDNLNGQ 69
Query: 62 N----GWRVELSHNSR 73
+ RVE+S R
Sbjct: 70 DILGSKLRVEISKGRR 85
>gi|291224719|ref|XP_002732349.1| PREDICTED: rbp1-like RNA-binding protein PB-like [Saccoglossus
kowalevskii]
Length = 247
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+YVG+L V + DLE EF FG + +W+AR PPG+AF++FD +DA A+R LDGK
Sbjct: 4 SRIYVGDLRPDVRKEDLEKEFGKFGRVVDIWIARNPPGFAFLEFDSPKDADVAVRSLDGK 63
Query: 62 NG----WRVELS 69
+ RVE+S
Sbjct: 64 SVCGSRVRVEIS 75
>gi|291228272|ref|XP_002734102.1| PREDICTED: transformer-2 sex-determining protein, putative-like
[Saccoglossus kowalevskii]
Length = 204
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVG+L S ++ +LE F +G +R+VWVAR PPG+AF++F+D RDA D++R LDG+
Sbjct: 13 KVYVGDLGSGAAKHELERAFSHYGPLRNVWVARNPPGFAFVEFEDPRDASDSVRGLDGR 71
>gi|157417688|gb|ABV54791.1| RNA-binding 1-like protein [Ilyanassa obsoleta]
Length = 149
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+VYVG L ++++LE +F +G +++VWVAR+P G+AF++FDD RDA+DA+R LDG
Sbjct: 12 KVYVGELGHGCAKQELEXKFGKYGSLKNVWVARQPAGFAFVEFDDPRDAEDAVRALDGTR 71
Query: 62 -NGWRVELSHNS 72
NG RV + ++
Sbjct: 72 INGRRVRVEMST 83
>gi|407262172|ref|XP_003946018.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Mus
musculus]
gi|407264079|ref|XP_003945604.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Mus
musculus]
Length = 157
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGN + ++ +LE F +G +R+VWVAR PPG+AF++F+D RD DA+RELDG+
Sbjct: 11 KVYVGNRGNNGNKTELERAFGYYGPLRNVWVARNPPGFAFVEFEDPRDDADAVRELDGRA 70
Query: 63 ----GWRVELSHNSR 73
RVELS++ +
Sbjct: 71 LCGCCVRVELSNDEK 85
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+GNL ++ ++E F +G +++ W+AR PPG+AF++F+D RDA+DA+R LDG
Sbjct: 11 KVYIGNLGQNGTKHEIEASFTKYGPLKNTWIARNPPGFAFVEFEDPRDAEDAVRGLDGTR 70
Query: 63 GW----RVELSHN 71
RVE+S N
Sbjct: 71 ICGVRVRVEMSSN 83
>gi|391347503|ref|XP_003748000.1| PREDICTED: uncharacterized protein LOC100899663, partial
[Metaseiulus occidentalis]
Length = 166
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R++VG ++ + + DLE F +G + +VWVA+ PPG+AF+DFDD ++A DA+ ++DG+
Sbjct: 37 NRIFVGGINESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQ 96
Query: 62 --NGWRVELS 69
NG ++++
Sbjct: 97 ELNGMTLKVA 106
>gi|312384272|gb|EFR29035.1| hypothetical protein AND_02328 [Anopheles darlingi]
Length = 556
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVWVA PPG+AFI+F++ +A+ A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKDEAETACDNLNGQ 66
Query: 62 N----GWRVELSH---NSRGG 75
+ RVE+S N RG
Sbjct: 67 DILGSKLRVEISKGRRNPRGA 87
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
++VYV L R E DL+D F FG I+ + + YAFID++++ DA A+RE++G
Sbjct: 93 FTQVYVAGLHRRTREDDLKDSFSKFGRIKQLVLKH---NYAFIDYENHEDAVAALREMNG 149
Query: 61 K---NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
K NG + + + GG + G + + CY C +PGH+A EC
Sbjct: 150 KTFVNGEELAVEQSVPGGKKRKSGPK-----REDVCYNCQKPGHWANEC 193
>gi|71027201|ref|XP_763244.1| splicing factor [Theileria parva strain Muguga]
gi|68350197|gb|EAN30961.1| splicing factor, putative [Theileria parva]
Length = 132
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
+++VGNL V+ +DL+ F +G + +VWVAR PPG+ F+ FDD RDA+DA+ EL+GK
Sbjct: 12 KLFVGNLVDSVTSQDLDLLFSKYGKVTNVWVARNPPGFGFVTFDDPRDAKDALIELNGKD 71
Query: 62 ---NGWRVE 67
N R+E
Sbjct: 72 LHGNSLRIE 80
>gi|391348700|ref|XP_003748582.1| PREDICTED: uncharacterized protein LOC100904155 [Metaseiulus
occidentalis]
Length = 531
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R++VG + + + DLE F +G + +VWVA+ PPG+AF+DFDD ++A DA+ ++DG+
Sbjct: 46 NRIFVGGISESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQ 105
Query: 62 --NGWRVELS 69
NG ++++
Sbjct: 106 ELNGMTLKVA 115
>gi|313231379|emb|CBY08494.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 7/79 (8%)
Query: 2 SRVYVGNLDS-RVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD- 59
S+VYVGNL S + E DLE+EF+ +G I+ ++VAR PPG+A+IDF R A+ A+RE+
Sbjct: 3 SKVYVGNLGSDPLQESDLEEEFQDYGHIKEIFVARNPPGFAYIDFVSERSAKTAVREMQS 62
Query: 60 -----GKNGWRVELSHNSR 73
G+ +VELS+ +R
Sbjct: 63 RRKICGRKRVKVELSNRAR 81
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L +R RDLE F +G IR V + R YAFI+F D+RDA +A +LDG+
Sbjct: 11 TRLYVGRLATRTRSRDLEHLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVESAKGVPRGSGGSREYMGRGPPPGTG-RCFNCGVDGHWARDCKA 119
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+YVGNL S VS RD+E+EFR +G I V + G +AFI+F+D RDA DAI+E
Sbjct: 7 VSRIYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEK 66
Query: 59 DG----KNGWRVELSHNSRGGG 76
DG N RVE+ N+R G
Sbjct: 67 DGCDFEGNKLRVEVPFNARENG 88
>gi|221504228|gb|EEE29903.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 344
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 7 GNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
G +++ + +LE F +G I +VWVAR PPG+AF+ FDDYRDA+DA+ ELDG
Sbjct: 190 GGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 243
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L +R RDLE F +G IR V + R YAFI+F D+RDA +A +LDG+
Sbjct: 11 TRLYVGRLATRTRSRDLEHLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEFAKGVPRGSGGSREYMGRGPPPGTG-RCFNCGVDGHWARDCKA 119
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L R RDLE F +G IR V + R YAFI+F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSPRTRSRDLEYLFSKYGRIREVELKR---DYAFIEFSDPRDADDAQYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEFAKGVPRGSGGSRDYNGRGPPPGTG-RCFNCGVDGHWARDCQA 119
>gi|56757157|gb|AAW26750.1| unknown [Schistosoma japonicum]
Length = 131
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 --GWRVELSHNSRGGGGGR-GGGRGRSGGSDLKCYECGEP 99
G R+ + H R GGR R+ + P
Sbjct: 72 PFGSRLRVEHAVNNKTANRLPGGRCRNISPEAAHVHLAHP 111
>gi|259089273|ref|NP_001158674.1| Splicing factor, arginine/serine-rich 3 [Oncorhynchus mykiss]
gi|225705750|gb|ACO08721.1| Splicing factor, arginine/serine-rich 3 [Oncorhynchus mykiss]
Length = 89
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL + + +LE F +G +RSVWVAR PPG+AF++F+D RDA DA++EL +
Sbjct: 10 KVYVGNLGNNGDKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVKELQPQ 68
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G IR V + R YAFI+F D RDA++A LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKR---DYAFIEFSDPRDAEEARYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTG-RCFNCGIDGHWARDCKA 119
>gi|391348702|ref|XP_003748583.1| PREDICTED: uncharacterized protein LOC100904296 [Metaseiulus
occidentalis]
Length = 236
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R++VG L + + DLE EF +G + VWVA+ PPG+AFI+FDD RDA +A E++G
Sbjct: 74 NRIFVGGLTDGIVKEDLEREFSKYGKLNHVWVAQNPPGFAFIEFDDERDASEACNEMNGA 133
Query: 62 N 62
N
Sbjct: 134 N 134
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G IR V + R YAFI+F D RDA++A LDG+
Sbjct: 19 TRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKR---DYAFIEFSDPRDAEEARYNLDGR 75
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 76 DVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTG-RCFNCGIDGHWARDCKA 127
>gi|209881965|ref|XP_002142420.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
gi|209558026|gb|EEA08071.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
Length = 241
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++V++G LD ++ +LE EFR FGV+ +VWVAR PPG+ F+ + + RDA+ +++E+DG
Sbjct: 8 TKVFIGQLDPWITPGELEREFRRFGVVDAVWVARNPPGFGFVTYANPRDAELSVQEMDGS 67
Query: 62 NGW-----RVELS---HNSRGGGGGRGGG 82
+ RVE++ ++ R GR G
Sbjct: 68 TIFGRRPIRVEMAKSIYSRRDSSSGRHNG 96
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 7/76 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVG+L RV ERDLE FR FG IR V + G+ F++FDDYRDA DA+ EL+G
Sbjct: 1 MTRVYVGHLSYRVRERDLERFFRGFGKIREVLLKN---GFGFVEFDDYRDADDAVYELNG 57
Query: 61 K--NGWR--VELSHNS 72
+ +G R VEL+H +
Sbjct: 58 RELDGERVVVELAHGT 73
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RV + NL SR+S +DL+D R G + R ++F Y D + AI +LD
Sbjct: 101 RVIIENLSSRISWQDLKDRMRQVGDVTYADAHRHRRNEGVVEFASYSDMKRAIEKLDNTE 160
Query: 62 -NGWRVEL 68
NG R+ +
Sbjct: 161 INGRRIRV 168
>gi|321456059|gb|EFX67176.1| hypothetical protein DAPPUDRAFT_18244 [Daphnia pulex]
Length = 79
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 11/86 (12%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVYVG++ V + DLE EF +G + S WVA PPG+AFI+F+D DAQ+A+ ++G +
Sbjct: 1 RVYVGSILENVKKEDLEVEFGKYGKLTSAWVAFNPPGFAFIEFEDESDAQEAVASMNGTD 60
Query: 63 GW----RVELSHNSRGGGGGRGGGRG 84
RVE+S N RG GRG
Sbjct: 61 FMGSKIRVEISPN-------RGRGRG 79
>gi|443698345|gb|ELT98383.1| hypothetical protein CAPTEDRAFT_123867, partial [Capitella
teleta]
Length = 88
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++YVG+L V++ DLE EFR +G I+ VWVAR PPG+AFI+F +D + A+R ++GK
Sbjct: 1 KLYVGDLLESVTKDDLEKEFRQYGRIKEVWVARNPPGFAFIEFAHEKDIRSAVRSMNGK 59
>gi|318087272|gb|ADV40228.1| putative alternative splicing factor SRp20/9G8 [Latrodectus
hesperus]
Length = 165
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+ +YVG L V + DLE EF +G + VWVAR PPG+AFI+F+D +DA +AI+E++G
Sbjct: 4 TSLYVGGLGEDVQKEDLEREFGKYGNLTKVWVARNPPGFAFIEFEDDQDANEAIKEMNG 62
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L R RDLE F +G IR V + R YAFI+F D RDA DA LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKR---DYAFIEFSDPRDADDAQYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 EVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGTG-RCFNCGMDGHWARDCK 118
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 69
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 70 ELLGSQLRVEIS 81
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+YVG L SR RDLE F +G IR V + R YAFI++ D RDA DA LDG+
Sbjct: 11 SRLYVGRLSSRTRTRDLEYLFSRYGRIREVELKR---DYAFIEYSDPRDADDAQYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG---GGRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEFAKGIPRGPGGSREREYMGRGPPPGTG-RCFNCGIDGHWARDCK 120
>gi|242022186|ref|XP_002431522.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212516816|gb|EEB18784.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 150
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R++V +L VS+ +L F +G ++ VWVA PP +AF+ F++ DA++AI+ +D +
Sbjct: 37 RLHVADLGQGVSKGELTRVFEKYGPLKEVWVASSPPCFAFVVFENREDAEEAIQGVDNTS 96
Query: 63 --GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G RV +S +R GRG +S + +CY CGE GHF+R+C
Sbjct: 97 VGGNRVRVSV-ARPRTRGRG---LKSYDPNQRCYTCGERGHFSRDC 138
>gi|401400142|ref|XP_003880722.1| novel protein (Zgc:77155), related [Neospora caninum Liverpool]
gi|325115133|emb|CBZ50689.1| novel protein (Zgc:77155), related [Neospora caninum Liverpool]
Length = 206
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 7 GNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
G +++ + +LE F +G I +VWVAR PPG+AF+ FDDYRDA+DA+ ELDG
Sbjct: 35 GGIEADTTTEELESLFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDG 88
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIREL 58
M +++VGNL +SE +LE F FG I +V + RRPP +AFI+++D RDA+DA++++
Sbjct: 24 MPKIFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQM 83
Query: 59 DGKN----GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEP 99
GK RVE+S N G GR G+ + P
Sbjct: 84 HGKELHGAEIRVEISRNGPKASRDEKFG-GRHHGTQFRVELSNIP 127
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 69
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 70 ELLGSQLRVEIS 81
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIREL 58
M +++VGNL +SE +LE F FG I +V + RRPP +AFI+++D RDA+DA++++
Sbjct: 24 MPKIFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQM 83
Query: 59 DGKN----GWRVELSHN 71
GK RVE+S N
Sbjct: 84 HGKELHGAEIRVEISRN 100
>gi|195119159|ref|XP_002004099.1| GI19446 [Drosophila mojavensis]
gi|193914674|gb|EDW13541.1| GI19446 [Drosophila mojavensis]
Length = 196
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|344241848|gb|EGV97951.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 131
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNG 63
VYVGN+ ++ +LE F +G + SVWVA+ PP +AF++F+D RDA DA++EL+G+
Sbjct: 12 VYVGNIGINGNKTELEHAFCYYGPLPSVWVAQNPPDFAFVEFEDPRDAADAVQELNGRTL 71
Query: 64 W----RVELSHNSRGGGGGRGGGRG 84
RVE+S+ G R G RG
Sbjct: 72 CGCRVRVEVSN-----GEKRSGNRG 91
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 10 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 69
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 70 ELLGSQLRVEIS 81
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|112983080|ref|NP_001037670.1| repressor splicing factor 1 [Bombyx mori]
gi|95115206|gb|ABF55969.1| Rsf1 [Bombyx mori]
Length = 143
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L + + DLE EF +G + SVWVA PPG+AFI+F++ ++A+DA ++G
Sbjct: 6 TRVYVGGLVEGIKKEDLEREFAKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGT 65
Query: 62 N----GWRVELS 69
+VE+S
Sbjct: 66 EMLGATLKVEIS 77
>gi|427796305|gb|JAA63604.1| Putative alternative splicing factor srp20/9g8 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 188
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+R++VG L +++ DLE EF +G + VWVA+ PPG+AF++FDD RDA +AIR ++G
Sbjct: 7 QTRIFVGGLGDNMAKDDLEREFGKYGRLNQVWVAQNPPGFAFLEFDDDRDADEAIRNMNG 66
Query: 61 --KNGWRVELSHN 71
NG R+ + ++
Sbjct: 67 VVLNGSRLRVEYS 79
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YV L +R RDLE F +G IR V + R YAFI+F D+RDA +A +LDG+
Sbjct: 11 TRLYVSRLATRTRSRDLEHLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEFAKGVPRGSGGSREYMGRGPPPGTG-RCFNCGVDGHWARDCKA 119
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 18/100 (18%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGY FI+F+D RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG------------GGGGRGGGRGR 85
N RVEL+H RG GGR GG R
Sbjct: 69 NFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSR 108
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + +PPGYAF++F+D RDAQDAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSRGGG---------GGRGGGRGRSGGSDLKCYECGEP 99
+G+R VEL+H RG GR G RG S SD + G P
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 150
>gi|308459496|ref|XP_003092067.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
gi|308254399|gb|EFO98351.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
Length = 116
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL +E +L D F V G I+++W+A+RPPG+AF+ F A DA++ L+GK
Sbjct: 18 QVYVGNLPFDATEEELHDVFSVMGPIKNIWIAKRPPGFAFVTFKRTVHAYDAVKYLNGKK 77
Query: 63 GWRVE 67
+E
Sbjct: 78 ICNLE 82
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + +PPGYAF++F+D RDAQDAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSRGGG---------GGRGGGRGRSGGSDLKCYECGEP 99
+G+R VEL+H RG GR G RG S SD + G P
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 150
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDAQDAI G+
Sbjct: 32 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 88
Query: 62 NGW-------RVELSHNSRGGGGGR------GGGRGRSGGSDLKCYECGEPG 100
NG+ RVEL+H RG R G RG + +D + G P
Sbjct: 89 NGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPS 140
>gi|443714454|gb|ELU06855.1| hypothetical protein CAPTEDRAFT_164776 [Capitella teleta]
Length = 196
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG L SR + +LE EF FG I VWVAR PPG+AF+ + DA+ A++ELDG+
Sbjct: 13 RVFVGELGSRAGKYELEKEFEYFGPIVDVWVARNPPGFAFVVYKHSADAKKAVKELDGRM 72
Query: 63 G----WRVELS 69
RVEL+
Sbjct: 73 ICGRRVRVELA 83
>gi|308459492|ref|XP_003092065.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
gi|308254397|gb|EFO98349.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
Length = 112
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL +E++L D F V G I+++W+A+RPPG+AF+ F A DA++ L+GK
Sbjct: 18 QVYVGNLPFDATEQELHDVFSVMGPIKNIWLAKRPPGFAFVTFKRTVHAYDAVKYLNGKK 77
Query: 63 GWRVE 67
+E
Sbjct: 78 ICNLE 82
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + +PPGYAF++F+D RDAQDAI DG
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 62 --NGWR--VELSHNSRGGG---------GGRGGGRGRSGGSDLKCYECGEP 99
+G+R VEL+H RG GR G RG S SD + G P
Sbjct: 69 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 119
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L R RDLE F +G IR V + R YAFI+F D+RDA +A +LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFGRYGRIREVELKR---DYAFIEFSDHRDADEARYQLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTG-RCFNCGIDGHWARDCKA 119
>gi|256084273|ref|XP_002578355.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045236|emb|CCD82784.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 298
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 --GWRVELSH 70
G R+ + H
Sbjct: 72 PFGSRLRVEH 81
>gi|256084271|ref|XP_002578354.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045235|emb|CCD82783.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 301
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 --GWRVELSH 70
G R+ + H
Sbjct: 72 PFGSRLRVEH 81
>gi|328711080|ref|XP_003244442.1| PREDICTED: hypothetical protein LOC100575791 [Acyrthosiphon pisum]
Length = 164
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R++V ++ S ++ RD+E EF +G + VW++R P +AF+ + +DA +A + +G
Sbjct: 51 RLHVRDIGSSITRRDIEKEFERYGTLLEVWMSRTRPSFAFVVYKRDKDAAEAQKRTNGME 110
Query: 63 GWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ L+ + ++ G R R S L+CY C GHF+R C+
Sbjct: 111 LYGSFLTVSFAKTRGLSRRSSRNNSYRDSLRCYSCNRVGHFSRSCK 156
>gi|2815290|emb|CAA05719.1| P23 protein [Chironomus tentans]
gi|3954793|emb|CAA06034.1| hnRNP protein [Chironomus tentans]
Length = 191
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + LE+EF FG + SVW+A PPG+AFI+F + +A A L+G+
Sbjct: 7 TRVYVGNLTDKVKKEQLEEEFTRFGKLNSVWLAHNPPGFAFIEFANKDEAISACDSLNGQ 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSKLRVEIS 78
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 75/156 (48%), Gaps = 30/156 (19%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L +R RDLE F +G +R V + R YAF++F D RDA DA LDGK
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKR---DYAFVEFSDPRDADDARHYLDGK 67
Query: 62 --NGWRVEL---------SHNSRGGGGGRGGGRGRSGGSD-------------LKCYECG 97
+G R+ + S G G G GR + G D KCY CG
Sbjct: 68 EFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 127
Query: 98 EPGHFARECR---LRGGSGRRRSRSPRYRRSPSYGR 130
E GH R C+ + G+ SRSP RSP GR
Sbjct: 128 ERGHIERNCKNSPKKLTRGKSYSRSPGRSRSPHRGR 163
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + +PPGYAF++F+D RDAQDAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSRGGG---------GGRGGGRGRSGGSDLKCYECGEP 99
+G+R VEL+H RG GR G RG S SD + G P
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 150
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + +PPGYAF++F+D RDAQDAI DG
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 62 --NGWR--VELSHNSRGGG---------GGRGGGRGRSGGSDLKCYECGEP 99
+G+R VEL+H RG GR G RG S SD + G P
Sbjct: 69 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 119
>gi|195450476|ref|XP_002072511.1| GK12439 [Drosophila willistoni]
gi|194168596|gb|EDW83497.1| GK12439 [Drosophila willistoni]
Length = 192
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + +PPGYAF++F+D RDAQDAI DG
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 62 --NGWR--VELSHNSRGGG---------GGRGGGRGRSGGSDLKCYECGEP 99
+G+R VEL+H RG GR G RG S SD + G P
Sbjct: 100 DFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLP 150
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 13/112 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L SR RDLE F +G +R V + R YAF++F D RDA DA LDGK
Sbjct: 11 TRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKR---DYAFVEFSDPRDADDARYHLDGK 67
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G RG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DLDGSRIIVEF---AKGVPRGSREYLGRGPPPGSG-RCFNCGIDGHWARDCK 115
>gi|226469178|emb|CAX70068.1| Serine/arginine repetitive matrix protein 2 [Schistosoma
japonicum]
Length = 298
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 --GWRVELSH 70
G R+ + H
Sbjct: 72 PFGSRLRVEH 81
>gi|389608769|dbj|BAM17996.1| repressor splicing factor 1 [Papilio xuthus]
Length = 158
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L + + DLE EF +G + SVWVA PPG+AFI+F++ ++A+DA ++G
Sbjct: 6 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNGF 65
Query: 62 N----GWRVELS 69
+VELS
Sbjct: 66 EMLGATLKVELS 77
>gi|146179448|ref|XP_001020597.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila]
gi|146144570|gb|EAS00352.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila
SB210]
Length = 256
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 20/124 (16%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK-- 61
++VG L SRV E DL DEFR +G IR + RR G+AFI++ DA+ A+ ++DG+
Sbjct: 13 IFVGKLSSRVREEDLRDEFRRYGRIRDIDF-RRQRGFAFIEYSSSSDAKQAVEDMDGQRF 71
Query: 62 NGWRVELSH-------NSRG----------GGGGRGGGRGRSGGSDLKCYECGEPGHFAR 104
R+ + + N RG G G + G + +CY CG+ GH +
Sbjct: 72 EDTRIVVQYKENRSDRNRRGPSTADVCYNCGRKGHWANECKEGNWNNRCYRCGKSGHLKK 131
Query: 105 ECRL 108
EC L
Sbjct: 132 ECSL 135
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
Length = 309
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDL+D F +G +R V + R YAF++F D RDA DA L+G+
Sbjct: 11 TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYSLNGR 67
Query: 62 N--GWR--VELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ G R VE++ G GG GR +C+ CG GH+AR+C+
Sbjct: 68 DVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCK 117
>gi|156350426|ref|XP_001622278.1| predicted protein [Nematostella vectensis]
gi|156208774|gb|EDO30178.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
++V+VGNL +L + F+ +G +R VWVAR PPG+AF++F D RDA+DA+ LDG
Sbjct: 3 TTKVWVGNLGKEGDRHELWEAFKSYGELRDVWVARNPPGFAFVEFYDARDARDAVDALDG 62
Query: 61 K----NGWRVELSH 70
+ +VELSH
Sbjct: 63 ERICGQRVKVELSH 76
>gi|91080449|ref|XP_969323.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005570|gb|EFA02018.1| hypothetical protein TcasGA2_TC007641 [Tribolium castaneum]
Length = 185
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L V + DLE EF +G + SVWVA PPG+AFI+F ++ DA+ A L+G
Sbjct: 9 ARVYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPPGFAFIEFINHSDAESACDSLNGT 68
Query: 62 N----GWRVELS 69
+ RVE++
Sbjct: 69 DFLGSKLRVEIA 80
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 62 NG----WRVELSHNSRGGGGGR 79
+ RVE +H RG R
Sbjct: 95 DFDGHRLRVEAAHGGRGNSSSR 116
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L RV ERDLE FR +G I+ V + G+AF++FDDYRDA DA+ EL+GK
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKN---GFAFVEFDDYRDADDAVYELNGK 59
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 60 ELLGERITV---ERARGTPRGSDQWRYGDS 86
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 126 RLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTE 185
Query: 62 -NGWRVELSHNSR 73
NG R+ L + R
Sbjct: 186 LNGRRIRLIEDKR 198
>gi|194761708|ref|XP_001963070.1| GF14123 [Drosophila ananassae]
gi|190616767|gb|EDV32291.1| GF14123 [Drosophila ananassae]
Length = 192
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|260826884|ref|XP_002608395.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
gi|229293746|gb|EEN64405.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
Length = 92
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVG+L ++ +LE F FG +R+VWVAR P G+AF++F+D RDA+DA+ LDG+
Sbjct: 5 KVYVGDLGQSGTKHELERAFGAFGPLRNVWVARNPAGFAFVEFEDPRDARDAVDALDGRY 64
Query: 63 GW----RVELSHNSR 73
VE+SH +
Sbjct: 65 ICGRRVLVEMSHGKK 79
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L R RDLE F +G IR V + R YAFI+F D DA DA LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKR---DYAFIEFSDPHDADDAQYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 EVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGTG-RCFNCGIDGHWARDCKA 119
>gi|195387425|ref|XP_002052396.1| GJ17527 [Drosophila virilis]
gi|194148853|gb|EDW64551.1| GJ17527 [Drosophila virilis]
Length = 198
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGS 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + R YAF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRARDLERLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYYLDGR 67
Query: 62 --NGWRVELSHNSRGG--GGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ + SRG G G RG GS +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITV-EASRGAPRGSRDNGSRGPPPGSG-RCFNCGVDGHWARDC 114
>gi|356572373|ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
Length = 287
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 13/112 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L SR RDLE F +G +R V + +AF+DF D RDA DA LDG+
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKN---DFAFVDFSDPRDADDARYNLDGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G RG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEF---AKGAPRGSREYLGRGPPPGSG-RCFNCGLDGHWARDCK 115
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32; AltName:
Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + R YAF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYYLDGR 67
Query: 62 --NGWRVELSHNSRGG--GGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ + SRG G G RG GS +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITV-EASRGAPRGSRDNGSRGPPPGSG-RCFNCGVDGHWARDC 114
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 14/96 (14%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V ER+++D F +G I + + RPPGY FI+F+D RDA+DAIR DG
Sbjct: 8 IYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGY 67
Query: 62 NG----WRVELSHNSRGGG--------GGRGGGRGR 85
N RVE++H RG GGRGG R
Sbjct: 68 NFDGYRLRVEIAHGGRGPPSSDRYSSYGGRGGSVSR 103
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 20/108 (18%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+YVG SR E+DLE+ F+ FG I S+ + G+AF++FD+ + A AI E+DGK
Sbjct: 61 RIYVGKFSSRTGEKDLEETFKKFGKILSLDMK---AGFAFVEFDNEKSANQAIDEMDGKE 117
Query: 62 ---NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
V+ SH GGR RS +CY C GH+AR C
Sbjct: 118 VDGEKLIVQKSH----------GGRKRSSD---ECYLCRGRGHWARNC 152
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 110 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 169
Query: 62 NG----WRVELSHNSRGGGGGR 79
+ RVE +H RG R
Sbjct: 170 DFDGHRLRVEAAHGGRGNSSSR 191
>gi|242025305|ref|XP_002433066.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212518582|gb|EEB20328.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 216
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L + DLE EF FG + +VWVA PPG+AFI+F + DA++A ++G
Sbjct: 18 TRVYVGGLSQGTKKEDLESEFEKFGKLNNVWVAFNPPGFAFIEFSNKTDAENACDSMNGT 77
Query: 62 N----GWRVEL 68
RVEL
Sbjct: 78 ELLGGKLRVEL 88
>gi|308452462|ref|XP_003089055.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
gi|308243476|gb|EFO87428.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
Length = 116
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL +E++L D F V G I+++W+A+RPPG+AF+ F A DA++ L+G
Sbjct: 18 QVYVGNLPFDATEKELHDVFSVMGPIKNIWLAKRPPGFAFVTFKRTVHAYDAVKYLNGTK 77
Query: 63 GWRVE 67
+E
Sbjct: 78 ICNLE 82
>gi|222617767|gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AF++F D RDA +A LDG+
Sbjct: 71 TRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDARDADEARYNLDGR 127
Query: 62 --NGWR--VELSHN-SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECR 107
+G R VE + RG GG R GRG GS +C+ CG GH+AR+C+
Sbjct: 128 DFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSG-RCFNCGIDGHWARDCK 178
>gi|76162112|gb|AAX30173.2| SJCHGC01414 protein [Schistosoma japonicum]
Length = 97
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 19 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 78
Query: 63 GW----RVELSHNSRGGG 76
+ RVE + N++
Sbjct: 79 PFGSRLRVEHAVNNKTAN 96
>gi|226486670|emb|CAX74412.1| RNA-binding protein 1 [Schistosoma japonicum]
gi|226486672|emb|CAX74413.1| RNA-binding protein 1 [Schistosoma japonicum]
Length = 90
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG +D RV + D+E EF FG I VWVAR PPG+AFI F DA A+R +DG
Sbjct: 12 RVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 63 GW----RVELSHNSRGGG 76
+ RVE + N++
Sbjct: 72 PFGSRLRVEHAVNNKTAN 89
>gi|353238715|emb|CCA70653.1| hypothetical protein PIIN_04589 [Piriformospora indica DSM 11827]
Length = 410
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
++VYVGNL E DL+D F+ FGVI+S+ + GY F+ FD + A++A + +G
Sbjct: 47 ANKVYVGNLPDDTREADLQDCFKEFGVIKSIELKT---GYGFVAFDSRQAAEEAAKTYNG 103
Query: 61 ----KNGWRVELSHNSRGGGGGRGGGRGRSGGSDL----KCYECGEPGHFARECRLRGG 111
N RV +H G ++G L C++CG GH+AREC G
Sbjct: 104 GSFLGNTIRVAPAH-----------GTNKTGSKSLVEPGACFKCGNHGHWARECPHHQG 151
>gi|356505156|ref|XP_003521358.1| PREDICTED: uncharacterized protein LOC100812698 [Glycine max]
Length = 287
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 13/112 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L SR RDLE F +G +R V + +AF+DF D RDA DA LDG+
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKN---DFAFVDFSDPRDADDARYNLDGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G RG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEF---AKGAPRGSREYLGRGPPPGS-GRCFNCGLDGHWARDCK 115
>gi|289740733|gb|ADD19114.1| repressor splicing factor 1 [Glossina morsitans morsitans]
Length = 186
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL ++ + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVLNGT 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|241671849|ref|XP_002411428.1| RSZp21 protein, putative [Ixodes scapularis]
gi|215504077|gb|EEC13571.1| RSZp21 protein, putative [Ixodes scapularis]
Length = 222
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R++VG LD ++ DLE EF +G ++ VW+A+ PPG+AF++F+D +A+RE++G
Sbjct: 19 ARIFVGGLDCIMTREDLEREFGKYGQLKEVWMAQNPPGFAFVEFEDNSRVDEAVREMNGT 78
Query: 62 --NG--WRVE------LSHNSRGGGGGRGGGRGRSGG 88
NG RVE + RGGG GR R G
Sbjct: 79 IVNGALLRVERARDKARTRTPRGGGASSFRGRMRRGA 115
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAI-----R 56
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDAQDAI
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 57 ELDGKNGWRVELSHNSRGGGGGR------GGGRGRSGGSDLKCYECGEPG 100
+ DG + RVEL+H RG R G RG + +D + G P
Sbjct: 69 DFDG-HRLRVELAHGGRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPS 117
>gi|115434616|ref|NP_001042066.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|54290784|dbj|BAD61423.1| putative splicing factor [Oryza sativa Japonica Group]
gi|113531597|dbj|BAF03980.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|125524487|gb|EAY72601.1| hypothetical protein OsI_00466 [Oryza sativa Indica Group]
gi|215765664|dbj|BAG87361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AF++F D RDA +A LDG+
Sbjct: 18 TRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDARDADEARYNLDGR 74
Query: 62 --NGWR--VELSHN-SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R VE + RG GG R GRG GS +C+ CG GH+AR+C+
Sbjct: 75 DFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSG-RCFNCGIDGHWARDCKA 126
>gi|289739371|gb|ADD18433.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 168
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVGNL ++ + DLE EF +G + SVW+A PPG+AF++F+ DA+ A L+G
Sbjct: 7 TRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVLNGT 66
Query: 62 ----NGWRVELS 69
+ RVE+S
Sbjct: 67 ELLGSQLRVEIS 78
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 14/96 (14%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V ER+++D F +G I + + RPPGY FI+F+D RDA+DAIR DG
Sbjct: 6 IYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGY 65
Query: 62 NG----WRVELSHNSRG--------GGGGRGGGRGR 85
N RVE++H RG GGRGG R
Sbjct: 66 NFDGYRLRVEIAHGGRGPPSSDRYSSYGGRGGSVSR 101
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAI-----R 56
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDAQDAI
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 57 ELDGKNGWRVELSHNSRGGGGGR------GGGRGRSGGSDLKCYECGEPG 100
+ DG + RVEL+H RG R G RG + +D + G P
Sbjct: 69 DFDG-HRLRVELAHGGRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPS 117
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + E+++ED F +G I + V RPPGYAF++F+D DAQDAIR DG
Sbjct: 9 VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
+ RVEL+H GGRG S +D
Sbjct: 69 DFDGHRLRVELAH----------GGRGHSSSND 91
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPG+AF++F+D RDA+DAIR DG
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H RG
Sbjct: 135 NFDGNRLRVELAHGGRGNSSS 155
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 62 NG----WRVELSHNSRGGGGGR 79
+ RVE +H RG R
Sbjct: 95 DFDGHRLRVEAAHGGRGNSSSR 116
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 13/112 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L +R RDLE F +G +R V + R YAF++F D RDA DA LDGK
Sbjct: 11 TRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKR---DYAFVEFSDPRDADDARHYLDGK 67
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G RG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DFDGSRIIVEF---AKGVPRGSREYLGRGPPPGSG-RCFNCGIDGHWARDCK 115
>gi|405965540|gb|EKC30906.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 70
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++YVG+L E+DLE F +G +R+VWVAR P G+AF++++D RDA DA+R +DG
Sbjct: 12 KIYVGDLSRDACEKDLERAFEYYGRLRNVWVARNPAGFAFVEYEDPRDADDAVRGMDGT 70
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G IR V + R YAFI+F D RDA +A LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKR---DYAFIEFSDTRDADEARYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGG--RGGGRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + RG GG GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTG-RCFNCGIDGHWARDCK 119
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 18/121 (14%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AF++F D RDA DA LDG+
Sbjct: 14 TRLYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDPRDADDARYNLDGR 70
Query: 62 --NGWRVELSHNSRGGGGGRGGGRGRSGGSDL------------KCYECGEPGHFARECR 107
+G R+ + ++G G+GG R R G D +C+ CG GH+AR+C+
Sbjct: 71 DFDGSRM-IVEFAKGVPRGQGGSRDRDRGGDREYMGRGPPPGSGRCFNCGIDGHWARDCK 129
Query: 108 L 108
Sbjct: 130 A 130
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 35 VYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGY 94
Query: 62 NG----WRVELSHNSRGGGGGR 79
+ RVE +H RG R
Sbjct: 95 DFDGHRLRVEAAHGGRGNSSSR 116
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGHRLRVELAHGGRG 85
>gi|375073655|gb|AFA34386.1| Rbp-1 RNA binding protein 1 isoform A, partial [Ostrea edulis]
Length = 123
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 6 VGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK--NG 63
+G+L ++ +LED F +G IR+VWVAR PPG+AF++F D RD +DA + LDG NG
Sbjct: 1 IGDLGYGAAKYELEDVFSRYGPIRNVWVARNPPGFAFVEFQDTRDVEDATKALDGTRING 60
Query: 64 WRVELSHNS 72
RV + +S
Sbjct: 61 RRVRVEMSS 69
>gi|357620751|gb|EHJ72823.1| repressor splicing factor 1 [Danaus plexippus]
Length = 151
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L + + DLE EF +G + SVWVA PPG+AFI+F++ ++A+DA ++G
Sbjct: 6 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNGF 65
Query: 62 N----GWRVELS 69
+VELS
Sbjct: 66 EMLGATLKVELS 77
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPG+AF++F+D RDA+DAIR DG
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H RG
Sbjct: 135 NFDGNRLRVELAHGGRGNSSS 155
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 12/115 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G IR V + R YAFI++ D RDA +A LDG+
Sbjct: 11 ARLYVGRLSSRTRSRDLEYLFSKYGRIREVELKR---DYAFIEYSDPRDADEARYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGGRG---GGRGRSGGSDLKCYECGEPGHFARECRL 108
+G R+ + RG GG R GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEFAKGVPRGSGGSREREYVGRGPPPGTG-RCFNCGIDGHWARDCKA 121
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPG+AF++F+D RDA+DAIR DG
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H RG
Sbjct: 135 NFDGNRLRVELAHGGRGNSSS 155
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G IR V + R YAFI+F D RDA +A LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKR---DYAFIEFSDPRDADEARYNLDGR 67
Query: 62 --NGWRVELSHN---SRGGGGG--RGGGRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + RG GG GRG G+ +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTG-RCFNCGIDGHWARDCK 119
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V ER++ED F +G I + + RPPGY FI+F+D RDA+DAIR DG
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVE++H RG
Sbjct: 69 NFDGNRLRVEIAHGGRG 85
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L RV ERDLE FR +G I+ V + G+AF++FDDYRDA DA+ EL+GK
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKN---GFAFVEFDDYRDADDAVYELNGK 59
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 60 ELLGERITV---ERARGTPRGSDQWRYGDS 86
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 134 RLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIEKLDDTE 193
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 194 LNGRRIRL 201
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDAQDAI G+
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIY---GR 65
Query: 62 NGW-------RVELSHNSRGGGGGR------GGGRGRSGGSDLKCYECGEP 99
+G+ RVEL+H RG R G RG + +D + G P
Sbjct: 66 HGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLP 116
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI+ DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 74/153 (48%), Gaps = 33/153 (21%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L R RDLE F +G IR V + R YAFI+F ++RDA +A +LDG+
Sbjct: 11 TRLYVGRLAPRTRSRDLEYLFGKYGRIREVELKR---DYAFIEFSEHRDADEARYQLDGR 67
Query: 62 N--GWRVELSHN---SRGGGGGR---------GGGRGRSGGSD-------------LKCY 94
+ G R+ + RG GG R G GR + G D KCY
Sbjct: 68 DVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCY 127
Query: 95 ECGEPGHFARECRLRGGSGRRR---SRSPRYRR 124
CGE GH R C+ S RR SRSP RR
Sbjct: 128 RCGERGHIERNCQNSPRSVRRERSYSRSPSPRR 160
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V ER++ED F +G I + + RPPGY F++F+D RDA+DAIR DG
Sbjct: 9 IYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGG----------GGGRGGGRGR 85
N RVE++H RG GGR GG R
Sbjct: 69 NFDGNRLRVEIAHGGRGPPPAVDRSAAESGGRAGGVSR 106
>gi|268579471|ref|XP_002644718.1| Hypothetical protein CBG14713 [Caenorhabditis briggsae]
Length = 113
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGNL +E++L D F V G I+++W+A+RPPG+AF+ + A DA++ L+GK
Sbjct: 18 QVYVGNLPFDATEQELHDVFSVMGPIKNIWMAKRPPGFAFVTYKRTVHAYDAVKYLNGK 76
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 12/101 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR--RPPGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL V ERDL+D F +G IR + + R RPP YAF+ F+D RDA+DA+ D
Sbjct: 4 RIYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDN 63
Query: 61 KNG----WRVELSHNS------RGGGGGRGGGRGRSGGSDL 91
+ RVEL++ + RG GGGR R SDL
Sbjct: 64 YDFDGGRIRVELANETPRRRDDRGFGGGRNRTDFRLEVSDL 104
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRGG-------GGGRGGGRGRSGGSDLKCYECGEP 99
N RVEL+H RG G RG S SD + G P
Sbjct: 69 NFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 117
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
+ RVE +H GGRG S D
Sbjct: 69 DFDGHRLRVEPAH----------GGRGHSSSKD 91
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+Y+G L SRVSE+D+E FR +G IR V + G+ F++FDD RDA+DA+ +L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RV V NL SR+S +DL+D+ R GV + A + P A + F D + I + DG
Sbjct: 126 RVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRCIEKCDGMD 185
Query: 62 -NGWRVELSHNSRGG 75
NG ++++ +S+ G
Sbjct: 186 LNGRKIKMLDDSQAG 200
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIR 56
SR++VG L V+ER LE F +G I + RP G+ FI F D R A +AI+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGKDTGRPRGFGFITFTDRRGADEAIK 71
Query: 57 ELDGKN-GWRVELSHNSRGGGGG-------RGGG-RGRSGGSDLKCYECGEPGHFARECR 107
+ G+ G RV + + GG +GGG R GS+ +C++C PGH+AR+C
Sbjct: 72 HMHGRELGDRVISVNKAEPKVGGDDVDHLQKGGGYSSRGKGSEDECFKCRRPGHWARDCP 131
Query: 108 LRGGSG 113
GG G
Sbjct: 132 STGGEG 137
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 67/141 (47%), Gaps = 24/141 (17%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
++YVGN+ + RDLED F +G +R V + YAF++ D RDA+DA LDGK
Sbjct: 5 KLYVGNVSRHATRRDLEDLFSKYGRVRDVRLLS---DYAFVEMGDERDAEDARYYLDGKR 61
Query: 62 ---NGWRVELSHNSRG----------GGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-- 106
RVE + N R G G +G +CY CGE GH ++C
Sbjct: 62 LEGERIRVEFAKNERAPPRQPKCYNCGLLGHFARECPNGDWSNRCYRCGEKGHTQKDCTA 121
Query: 107 ---RLRGGSG--RRRSRSPRY 122
R SG RR RSPR+
Sbjct: 122 PRPRTPSPSGLPSRRKRSPRH 142
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R++VG++ +RV + DLE EF +G I VWVAR PPG+AF+ + DA A+R LDG+
Sbjct: 13 RLFVGDIGTRVGKNDLEREFDRYGPITDVWVARNPPGFAFVVYMYREDADKAVRSLDGRL 72
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 73 MCGRRVRVEH 82
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
+ RVE +H GGRG S D
Sbjct: 69 DFDGHRLRVEPAH----------GGRGHSSSKD 91
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPG+AF++F+D RDA+DAIR DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGG 75
N RVEL+H RG
Sbjct: 69 NFDGNRLRVELAHGGRGN 86
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + + V RPPGYAF++FDD RDA+DAI DG
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding
protein srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+Y+G L SRVSE+D+E FR +G IR V + G+ F++FDD RDA+DA+ +L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RV V NL SR+S +DL+D+ R GV + A + P A + F D + I + DG
Sbjct: 130 RVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRCIEKCDGMD 189
Query: 62 -NGWRVELSHNSRGG 75
NG ++++ +S+ G
Sbjct: 190 LNGRKIKMIDDSQAG 204
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL ERD+ED F +G + + + RPPGY FI+F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGG-----------GGGRGGGRGRS 86
+ RVEL+H RG GGGR GR +S
Sbjct: 69 DIDGHRLRVELAHGGRGALSVDRYSSFSSGGGRRNGRLQS 108
>gi|392901828|ref|NP_502757.2| Protein Y57G11A.5 [Caenorhabditis elegans]
gi|225878077|emb|CAB16494.2| Protein Y57G11A.5 [Caenorhabditis elegans]
Length = 110
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+VYVGN+ +E+++E F V G I+S+W+A+RPPG+AF+ F A DA++ L+GK
Sbjct: 18 QVYVGNMPFDATEKEIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDAVKYLNGK 76
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G I + V RPPGYAF++F+D +DA+DAIR DG
Sbjct: 9 VYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGR 79
+ RVE +H RG R
Sbjct: 69 DFDGHRLRVEPAHGGRGHSSSR 90
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDGK 61
R+YVGNL + +D+ED F FG I + + RR P +AF++FDD RDA+DA++ DG
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVQARDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGR 85
+ RVE S G G G GRGR
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGR 96
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+Y+G L SRVSE+D+E FR +G IR V + G+ F++FDD RDA+DA+ +L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RV V NL SR+S +DL+D+ R GV + A + P A + F D + I + DG
Sbjct: 126 RVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFASPTDLKRCIEKCDGMD 185
Query: 62 -NGWRVELSHNSRGGGG 77
NG ++++ +S+ G G
Sbjct: 186 LNGRKIKMIDDSQAGSG 202
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAI-----R 56
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDAQDAI
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 57 ELDGKNGWRVELSHNSRGGGGGR------GGGRGRSGGSDLKCYECGEP 99
+ DG RVEL+H RG R G RG + +D + G P
Sbjct: 69 DFDGHR-LRVELAHGGRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLP 116
>gi|405966435|gb|EKC31722.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 228
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG+L SRV + +LE EF+ FG I VWVAR PPG+AF+ + DA++A+++L G
Sbjct: 12 RVFVGDLGSRVGKYELEREFQHFGPIMDVWVARNPPGFAFLVYKYGEDAEEAVKKLHGNL 71
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 72 VCGRRVRVEH 81
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+Y+G L SRVSE+D+E FR +G IR V + G+ F++FDD RDA+DA+ +L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGDRVILDYS 71
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
RV V NL SR+S +DL+D+ R GV + A + P A + F D + I + DG
Sbjct: 127 RVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRCIDKCDGMD 186
Query: 62 -NGWRVELSHNSRGG 75
NG ++++ +S+ G
Sbjct: 187 LNGRKIKMVDDSQAG 201
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIR--SVWVAR---RPPGYAFIDFDDYRDAQDAIR 56
SR++VG L V+ER LE F +G I + V R RP G+ FI F D R A DAI+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 57 ELDGKN-GWRVELSHNSRGGGGGR--------GGGRGRSGGSDLKCYECGEPGHFARECR 107
+ G+ G +V + + GG GG R G++ +C++C PGH+AR+C
Sbjct: 72 HMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWARDC- 130
Query: 108 LRGGSGRRRSRSPRYRRS 125
G R R R P RS
Sbjct: 131 PSTGDDRERFRVPLAMRS 148
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPG+AF++F+D RDA+DAIR DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGG 75
N RVEL+H RG
Sbjct: 69 NFDGNRLRVELAHGGRGN 86
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRGG-------GGGRGGGRGRSGGSDLKCYECGEP 99
N RVEL+H RG G RG S SD + G P
Sbjct: 69 NFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 117
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELD 59
+RV+VGNL V ER++ED F +G IRSV + RPP +AF++F+D RDA DA+R D
Sbjct: 4 TRVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRD 63
Query: 60 GKNG----WRVELSHNSR 73
G RVE+SH R
Sbjct: 64 GIEFQGQRLRVEVSHGRR 81
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDGK 61
R+YVGNL + +D+ED F FG I + + RR P +AF++FDD RDA+DA+ DG
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGR 85
+ RVE S G G G GRGR
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGR 96
>gi|383856885|ref|XP_003703937.1| PREDICTED: uncharacterized protein LOC100879230 [Megachile
rotundata]
Length = 183
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ EF +G + VW+A PPG+AFI+F + +A+ A ++G
Sbjct: 13 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWIAFNPPGFAFIEFLNMNEAELACSSMNGT 72
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 73 EIMGAKLRVEIS 84
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I V + RPP Y F++F++ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
N RVEL+H GGRG+S SD
Sbjct: 69 NFDGCRLRVELAH----------GGRGQSSSSD 91
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma
variegatum]
Length = 222
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDGK 61
R+YVGNL + +D+ED F FG I + + RR P +AF++FDD RDA+DA+ DG
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGR 85
+ RVE S G G G GRGR
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGR 96
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F FG I + + RPPGYAF++F+D RDA+DAIR DG
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRDGY 68
Query: 62 NG----WRVELSHNSRG 74
RVEL+H RG
Sbjct: 69 KFDGFRLRVELAHGGRG 85
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V ER++ED F +G I + + RPPGY FI+F+D RDA+DAIR DG
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVE++H RG
Sbjct: 69 NFDGNRLRVEIAHGGRG 85
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPG+AF++F+D RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H R
Sbjct: 69 NFDGNRLRVELAHGGRANSSS 89
>gi|313233267|emb|CBY24382.1| unnamed protein product [Oikopleura dioica]
Length = 167
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
S++YVGNL + +LE F +G + SVWVARRP G+AF++ + +A+DA++ LDG+
Sbjct: 19 SKIYVGNLGDYGDKAELERAFSKYGEVISVWVARRPTGFAFVEMKEEDEAEDAVKSLDGR 78
Query: 62 N--GWRVEL----SHNSRGGGGGRGG 81
G RV + SH G RGG
Sbjct: 79 EICGQRVRVEMRKSHRRVGNADDRGG 104
>gi|255644623|gb|ACU22814.1| unknown [Glycine max]
gi|255644635|gb|ACU22820.1| unknown [Glycine max]
gi|255644651|gb|ACU22828.1| unknown [Glycine max]
gi|255648053|gb|ACU24482.1| unknown [Glycine max]
Length = 167
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 13/112 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG+L SR RDLE F +G +R V + +AF+DF D RDA DA LDG+
Sbjct: 11 TRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKN---DFAFVDFSDPRDADDARYNLDGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G RG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRIIVEF---AKGAPRGSREYLGRGPPPGSG-RCFNCGLDGHWARDCK 115
>gi|340712414|ref|XP_003394755.1| PREDICTED: hypothetical protein LOC100651873 [Bombus terrestris]
gi|350399719|ref|XP_003485617.1| PREDICTED: hypothetical protein LOC100747513 [Bombus impatiens]
Length = 201
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ EF +G + VWVA PPG+AFI+F + +A+ A ++G
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRGG-------GGGRGGGRGRSGGSDLKCYECGEP 99
N RVEL+H RG G RG S SD + G P
Sbjct: 69 NFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 117
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I V + RPP Y F++F++ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
N RVEL+H GGRG+S SD
Sbjct: 69 NFDGCRLRVELAH----------GGRGQSSSSD 91
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVE +H RG
Sbjct: 69 NFDGHRLRVEAAHGGRG 85
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I + + RPP Y F++F+ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V R++ED F +G I + + RPPGYAF++F+D RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGFRLRVELAHGGRG 85
>gi|313216549|emb|CBY37839.1| unnamed protein product [Oikopleura dioica]
gi|313217070|emb|CBY38254.1| unnamed protein product [Oikopleura dioica]
Length = 157
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
S++YVGNL + +LE F +G + SVWVARRP G+AF++ + +A+DA++ LDG+
Sbjct: 9 SKIYVGNLGDYGDKAELERAFSKYGEVISVWVARRPTGFAFVEMKEEDEAEDAVKSLDGR 68
Query: 62 NG----WRVEL--SHNSRGGGGGRGG 81
RVE+ SH G RGG
Sbjct: 69 EICGQRVRVEMRKSHRRVGNADDRGG 94
>gi|380011044|ref|XP_003689623.1| PREDICTED: uncharacterized protein LOC100871916 [Apis florea]
Length = 201
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ EF +G + VWVA PPG+AFI+F + +A+ A ++G
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
+ RVEL+H RG
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|242052053|ref|XP_002455172.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|241927147|gb|EES00292.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|448878302|gb|AGE46114.1| arginine/serine-rich splicing factor RS2Z34 transcript I [Sorghum
bicolor]
Length = 296
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG + SR RDLED F +G +R V + +AF++F D RDA DA LD +
Sbjct: 24 TRLYVGRVSSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDPRDADDARYHLDDR 80
Query: 62 --NGWR--VELSHN-SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECR 107
+G R VE + RG GG R G+G GS +C+ CG GH+AR+C+
Sbjct: 81 EFDGSRLIVEFAKGIPRGPGGSREYMGKGPPPGSG-RCFNCGMDGHWARDCK 131
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
+ RVEL+H RG
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + +R+++D F +G I V + RPPGYAF++F+D RDA+DAIR DG
Sbjct: 46 LYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAEDAIRGRDGY 105
Query: 62 NG----WRVELSHNSR 73
N RVEL+H R
Sbjct: 106 NFDGCRLRVELAHGGR 121
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
+ RVEL+H RG
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+G L RV ERD+E FR +G +R V + GY F++F+DYRDA DA+ EL+GK
Sbjct: 3 TRVYIGGLPYRVKERDIERFFRGYGKLREVLIKN---GYGFVEFEDYRDADDAVYELNGK 59
Query: 62 N--GWRVELSH 70
G RV + H
Sbjct: 60 ELCGERVSVEH 70
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D + AI +LDG
Sbjct: 116 RLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSDLKTAIEKLDGTD 175
Query: 62 -NGWRVELSHN 71
NG R++L +
Sbjct: 176 LNGRRIKLVED 186
>gi|345488330|ref|XP_001605989.2| PREDICTED: hypothetical protein LOC100122382 [Nasonia
vitripennis]
Length = 188
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ +F FG + VWVA PPG+AFI+F + +A++A ++G
Sbjct: 7 ARVYVGGLNESIKKEDLQMQFEKFGKLNKVWVAFNPPGFAFIEFFNMDEAEEACSNMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|328779834|ref|XP_396951.3| PREDICTED: hypothetical protein LOC413508 [Apis mellifera]
Length = 178
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ EF +G + VWVA PPG+AFI+F + +A+ A ++G
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA+DA DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 62 NG----WRVELSHNSRGGGG 77
N RVE +H RG GG
Sbjct: 69 NFDGNRLRVEPAHGGRGSGG 88
>gi|149390510|gb|ABR25316.1| splicing factor [Oryza sativa Indica Group]
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AF++F D RDA +A LDG+
Sbjct: 18 TRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDARDADEARYNLDGR 74
Query: 62 --NGWR--VELSHN-SRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFARECR 107
+G R VE + RG GG R GRG GS +C+ CG GH+AR+C+
Sbjct: 75 DFDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSG-RCFNCGIDGHWARDCK 125
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I + V RPP Y F++FD+ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+++G LD RDLED F +G ++R YAF+DF+D+RDA+DA++E +G+
Sbjct: 9 LFIGRLDKHTRTRDLEDRFEKYGRILRCDVKYGAEMAYAFLDFEDHRDAEDALKEENGRE 68
Query: 63 GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
V + G R S + +CY+C GH+AR+C+
Sbjct: 69 YQGVSMVVEWAKGAPRRQQS---SQQAYDECYKCHRSGHWARDCK 110
>gi|300122234|emb|CBK22807.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRV++GN +R+ + DL F FG + +VW+AR PPG+AF+ F +A+ AIRE G
Sbjct: 13 MSRVHIGNT-ARLEKEDLRQAFEQFGTVTNVWIARNPPGFAFVTFSTPEEAEKAIRE--G 69
Query: 61 KNG------WRVELSH 70
N VEL+H
Sbjct: 70 NNMEIRDDRVSVELAH 85
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I + V RPP Y F++FD+ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L RV ERD+E FR +G I+ V + G+AF++FDDYRDA DA+ EL+GK
Sbjct: 3 TRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKN---GFAFVEFDDYRDADDAVYELNGK 59
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 109 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASYSDMKNAIDKLDDTE 168
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 169 LNGRRIRL 176
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I + V RPP Y F++FD+ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|189236212|ref|XP_001812169.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
gi|270005771|gb|EFA02219.1| hypothetical protein TcasGA2_TC007880 [Tribolium castaneum]
Length = 222
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+++ ++ V + DLE F FG ++ VW+ P + F F D + A A++ DG
Sbjct: 58 RLHIADIGDDVRKSDLEKVFAPFGDLKEVWMTNSTPCFGFAVFKDKKAANAALKATDGIE 117
Query: 63 --GWRVELSHN-SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-RLRGGSGRRRSR 118
G R+ ++H R G GR R S+++CY+CG GHF R+C L GG G +R R
Sbjct: 118 VAGSRIRVTHARPRTRGSGR-----RFFNSNMRCYQCGYSGHFYRDCPELNGGGGDKRDR 172
Query: 119 SPRY 122
+ RY
Sbjct: 173 NSRY 176
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L RV ERD+E FR +G I+ V + G+AF++FDDYRDA DA+ EL+GK
Sbjct: 3 TRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKN---GFAFVEFDDYRDADDAVYELNGK 59
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 119 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASYSDMKNAIDKLDDTE 178
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 179 LNGRRIRL 186
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D DA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG-------GGGGRGGGRGRSGGSDLKCYECGEPG 100
N RVEL+H RG G RG S SD + G P
Sbjct: 69 NFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPS 118
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPG+AF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H R
Sbjct: 69 NFDGNRLRVELAHGGRANSSS 89
>gi|315024124|gb|ADT71646.1| arginine/serine-rich 3 splicing factor [Mesocricetus auratus]
Length = 122
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Query: 22 FRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNGW----RVELSH 70
F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+
Sbjct: 3 FGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 55
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPG+AF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H R
Sbjct: 69 NFDGNRLRVELAHGGRANSSS 89
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L SER LED F +G I V RP G+ FI F D+R +DAIR
Sbjct: 7 NRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIR 66
Query: 57 ELDGK--NGWRVEL--------SHNSRGGGGGRG---GGRGRSGGSDL------KCYECG 97
E+ G+ +G + + S +S G GGR GGR G D C++CG
Sbjct: 67 EMHGRELDGRVISVNKAQPKMGSEDSGYGYGGRDRMLGGRDSYRGVDKPVGRSDDCFKCG 126
Query: 98 EPGHFAREC 106
PGH+AR+C
Sbjct: 127 RPGHWARDC 135
>gi|298706217|emb|CBJ29258.1| RNA-binding protein 1 [Ectocarpus siliculosus]
Length = 402
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+++GNL RVS DLE + +G I ++WVA+ PPG+AF DF + A D +R +DG
Sbjct: 8 IHIGNLHPRVSVADLEPKLIKYGTITNLWVAKNPPGFAFCDFQNRAMADDCVRGMDG 64
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPG+AF++F+D RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H R
Sbjct: 69 NFDGNRLRVELAHGGRANSSS 89
>gi|85000399|ref|XP_954918.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303064|emb|CAI75442.1| RNA-binding protein, putative [Theileria annulata]
Length = 146
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFI----------DFDDYRDAQ 52
R++VGNL V+ +DL+ F +G + +VWVAR PPG+ F+ FDD RDA+
Sbjct: 12 RLFVGNLVDSVTTQDLDSLFSKYGKVTNVWVARNPPGFGFVVCYNLFHLSQTFDDPRDAK 71
Query: 53 DAIRELDGKN 62
DA+ EL+GK+
Sbjct: 72 DALIELNGKD 81
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D DA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG-------GGGGRGGGRGRSGGSDLKCYECGEP 99
N RVEL+H RG G RG S SD + G P
Sbjct: 69 NFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 117
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
SRVY G L ERDLE F FG IR + + R GYAF++FDDYRDA+DAI EL+G
Sbjct: 3 SRVYAGKLPHDTRERDLERFFEGFGRIREILLRR---GYAFVEFDDYRDAEDAIYELNG 58
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I + + RPP Y F++F+ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRARDGY 68
Query: 62 NG----WRVELSHNSRGGGGG 78
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRGPSSS 89
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + R YAF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFGDPRDADDARHYLDGR 67
Query: 62 --NGWRVELSHNSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ + + G R RG G+ +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITVEFSRGAPRGSRDFDSRGPPPGAG-RCFNCGVDGHWARDC 114
>gi|32563822|ref|NP_871914.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
gi|26985892|emb|CAD59160.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
Length = 150
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+Y+G L SRVSE+D+E FR +G IR V + G+ F++FDD RDA+DA+ +L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
+ RVEL+H GGRG S D
Sbjct: 69 DFDGHRLRVELAH----------GGRGHSSSID 91
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + R YAF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFGDPRDADDARHYLDGR 67
Query: 62 --NGWRVELSHNSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ + + G R RG G+ +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITVEFSRGAPRGSRDFDSRGPPPGAG-RCFNCGVDGHWARDC 114
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA++AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 NG----WRVELSHNSRGGG 76
N RVE +H RG
Sbjct: 69 NFDGHRLRVEAAHGGRGNA 87
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 62 N----GWRVELSHNSRG 74
+ RVEL+H RG
Sbjct: 69 DFDGHQLRVELAHGGRG 85
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVG + +DLED FR +G +R+V + R + F++F D RDA DA +LDG+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE---FGFVEFTDPRDADDARHDLDGR 146
Query: 62 ----NGWRVELSHNS-RGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+ VE + + RG GG G+G S +CY CG GH+ R+C+
Sbjct: 147 IFDGSHLIVEFARGAQRGPGGVPLDGKGPSFPG--RCYNCGMDGHWVRDCK 195
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA++AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 NG----WRVELSHNSRGGG 76
N RVE +H RG
Sbjct: 69 NFDGHRLRVEAAHGGRGNA 87
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ FG IR + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + ++ ++F + D + AI +LDG
Sbjct: 113 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 172
Query: 62 -NGWRVEL 68
NG RV L
Sbjct: 173 LNGRRVRL 180
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + + E ++ED F +G I + V RPP Y F++FD+ RDA+DAIR DG
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + + E ++ED F +G I + V RPP Y F++FD+ RDA+DAIR DG
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER +ED F +G I + V RPPGYAF++F+D RDA+DA DG
Sbjct: 9 IYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 62 NG----WRVELSHNSRGGGG 77
N RVE +H RG GG
Sbjct: 69 NFDGNRLRVEPAHGGRGSGG 88
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 68
Query: 61 -KNGWRVELSHNSRGGGGGRGGGRGRSGGSD 90
+G+R+ + RGGG GR R G SD
Sbjct: 69 DYDGYRLRVEF-PRGGGPGRYSSSSRGGNSD 98
>gi|32563820|ref|NP_871913.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
gi|26985891|emb|CAD59159.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
Length = 148
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+Y+G L SRVSE+D+E FR +G IR V + G+ F++FDD RDA+DA+ +L+GK
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 62 N--GWRVELSHN 71
G RV L ++
Sbjct: 60 ELGGERVILDYS 71
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 72 NFDGYRLRVELAHGGRG 88
>gi|255577432|ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
gi|223530928|gb|EEF32787.1| RNA binding motif protein, putative [Ricinus communis]
Length = 217
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S VYV NLD ++ DL F FG I V V +R+ G AFI F DA A +
Sbjct: 51 STVYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDKQSRQSKGVAFIQFVSRDDAVSAAK 110
Query: 57 ELDGK--NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
++D K NG + S S G + R +CYECGE GH + EC
Sbjct: 111 QMDKKILNGRTLSASIASDNGRAAEFIKK-RVYKDKSRCYECGEIGHLSYEC 161
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGYRLRVELAHGGRG 85
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta
CCMP2712]
Length = 258
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVYVG+L SRV ERDL+DEF FG IR + + + G+AF+++D DA+ A+R++DG N
Sbjct: 6 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQ---GFAFVEYDHSEDAEYAVRKMDGVN 62
Query: 63 --GWRV 66
G R+
Sbjct: 63 LEGMRI 68
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1
[Acyrthosiphon pisum]
Length = 309
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L RV ERDLE F+ G ++ + + GYAF++FDDYRDA DA+ EL+G+
Sbjct: 5 TRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKN---GYAFVEFDDYRDADDAVYELNGR 61
Query: 62 --NGWRVEL 68
NG RV +
Sbjct: 62 ELNGERVSV 70
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D + A+ +LD
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKNEGVVEFASYSDLKTALDKLDDTE 180
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 181 LNGRRIRL 188
>gi|56755711|gb|AAW26034.1| SJCHGC01826 protein [Schistosoma japonicum]
Length = 220
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++Y+G L V + DL E G + VWVAR PPG+AF ++ DA+ A+R LDG N
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 63 G----WRVELSHNSRGGGGGRGGGRG 84
RVE +H R R RG
Sbjct: 71 VCGSRIRVEFAHGGRSKSAVRSAFRG 96
>gi|224109824|ref|XP_002315325.1| predicted protein [Populus trichocarpa]
gi|222864365|gb|EEF01496.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S +YV NLD ++ DL F FG + V V R+ G AFI F DA A+
Sbjct: 9 STLYVSNLDFSLTNSDLHTLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDAVTAVE 68
Query: 57 ELDGK--NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
++D K NG + S + G + R KCYECGE GH + EC
Sbjct: 69 QMDKKILNGRTLSASIAADNGRAAEFIKK-RVYKDKSKCYECGEDGHLSYEC 119
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + E+++ED F +G + + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 9 LYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
+ RVEL+H RG
Sbjct: 69 DFDGHRLRVELAHGGRG 85
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 9/73 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWV---ARRPPGYAFIDFDDYRDAQDAIR---- 56
VYVGNL S V E+++ED F +G IR++ + +R P +AFI FDD RDA++A+R
Sbjct: 6 VYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDG 65
Query: 57 -ELDGKNGWRVEL 68
E DGK RVE
Sbjct: 66 YEFDGKR-LRVEF 77
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D DA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRG-------GGGGRGGGRGRSGGSDLKCYECGEP 99
N RVEL+H RG G RG S SD + G P
Sbjct: 69 NFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 117
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AF++F D RDA DA L+G+
Sbjct: 43 TRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKH---DFAFVEFSDPRDADDARYSLNGR 99
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G G G GRG GS +C+ CG GH+AR+C+
Sbjct: 100 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSG-RCFNCGIDGHWARDCK 150
>gi|56756196|gb|AAW26273.1| unknown [Schistosoma japonicum]
Length = 224
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++Y+G L V + DL E G + VWVAR PPG+AF ++ DA+ A+R LDG N
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 63 G----WRVELSHNSRGGGGGRGGGRG 84
RVE +H R R RG
Sbjct: 71 VCGSRIRVEFAHGGRSKSAVRSAFRG 96
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPP YAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 N----GWRVELSHNSRGGGGGRGGGRGRSG 87
+ RVEL+H +G R SG
Sbjct: 69 DFDGCKLRVELAHGGKGPSFDRPNSYTSSG 98
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWV---ARRPPGYAFIDFDDYRDAQDAIRELDG 60
VYVGNL S V E+++ED F +G IR++ + +R P +AFI FDD RDA++A+R DG
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACDG 65
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + + E ++ED F +G I + V RPP Y F++FD+ RDA+DAIR DG
Sbjct: 116 IYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 175
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 176 NFDGCRLRVELAHGGRG 192
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + YAF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGSVRDVDMKH---DYAFVEFRDPRDADDARYNLDGR 67
Query: 62 --NGWR--VELSHN-SRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECRL 108
+G R VE + RG R GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGS-GRCFNCGIDGHWARDCKA 122
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + RD+ED F +G IR + V RPP +AF+ F+DYRDA+DAIR DG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 62 NGWRVELSHNSRGGGGGRGG 81
+ L G G RG
Sbjct: 61 SFEGARLRCEMSRGNGPRGS 80
>gi|405959140|gb|EKC25204.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 318
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPP--GYAFIDFDDYRDAQDAIREL 58
+++VYVG L V + LE+ F FG++++VW+AR P GYAF+ F D + A++A++ L
Sbjct: 11 IAKVYVGGLTENVEKYHLEELFERFGLVKTVWIARNPLSRGYAFVTFFDPKHAEEAVKGL 70
Query: 59 DGK----NGWRVELSHN 71
+G + +V+LS N
Sbjct: 71 NGTALQGSKLKVQLSKN 87
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIRELD 59
+RVYVGNL + R++ED F +G IR + V RPP +AF+DF+D RDA+DAIR D
Sbjct: 531 TRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRD 590
Query: 60 GKNG----WRVELSHNSRGGGGGRGGGR 83
G + RVE ++ R RG GR
Sbjct: 591 GYDYDGARLRVEPANGGRRESAPRGSGR 618
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + + E ++ED F +G I + + RPP Y F++F+ RDA+DAIR DG
Sbjct: 9 IYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
N RVEL+H GGRG S SD
Sbjct: 69 NFDGCRLRVELAH----------GGRGPSSSSD 91
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+G L ERD+E F+ +G +R V + GY F++F+DYRDA DA+ EL+GK
Sbjct: 242 TRVYIGRLSHHARERDVERFFKGYGRLRDVMLKN---GYGFVEFEDYRDADDAVYELNGK 298
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRS 86
+ G RV + H GG RG R S
Sbjct: 299 DLAGERVIVEH---ARGGPRGDDRRNS 322
>gi|332026868|gb|EGI66971.1| RNA-binding protein Rsf1 [Acromyrmex echinatior]
Length = 258
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ EF +G + VWVA PPG+AFI+F + +A+ A ++G
Sbjct: 7 TRVYVGGLNESIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGM 66
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 67 EIMGAKLRVEIS 78
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SR+YVGNL + V +D+ED F FG + V + +RPP +AF++F+D RDA+DA+R DG
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDFYGYRLRV 74
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G IR V + +AF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRIRGVDMKN---DFAFVEFSDPRDADDARYSLDGR 67
Query: 62 N--GWRVELSHNSRGGGGGRGG-GRGRSGGS---------------------DLKCYECG 97
+ G R+ + G G R GRG GS KCY CG
Sbjct: 68 DVEGSRIIVEFAKGGPRGSRENLGRGLPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 127
Query: 98 EPGHFARECRLRGGS----GRRRSRSPRYRRSPSYGR 130
E GH + C+ GR SRSP SP GR
Sbjct: 128 ERGHIEKNCKNSPKKSSRHGRSLSRSPVRSHSPRRGR 164
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L R SERD+E FR +G IR + + G+ F++FDD RDA DA+ EL+GK
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 62
Query: 62 N--GWRVELSHNSRG 74
G RV L + RG
Sbjct: 63 ELCGERVILEFSRRG 77
>gi|322798568|gb|EFZ20180.1| hypothetical protein SINV_12527 [Solenopsis invicta]
Length = 199
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L+ + + DL+ EF +G + VWVA PPG+AFI+F + +A+ A ++G
Sbjct: 11 TRVYVGGLNESIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGM 70
Query: 62 N----GWRVELS 69
RVE+S
Sbjct: 71 EIMGAKLRVEIS 82
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIREL 58
M+RV+VGNL V ERDL D+F FG I SV + RPP +AFI +D+ DA DA+R +
Sbjct: 1 MARVFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSM 60
Query: 59 DGKNG----WRVELS 69
G RVE+S
Sbjct: 61 HGAMLSGCRLRVEMS 75
>gi|405974565|gb|EKC39200.1| RNA-binding protein 4 [Crassostrea gigas]
Length = 226
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 21/129 (16%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++Y+GNL + DL+ F +G + + R Y FI F++ +A+ A LDG
Sbjct: 7 TKLYIGNLPETCRKADLQKMFEAYGKVIECDIVR---NYCFIHFENPNEAKMAQANLDGV 63
Query: 62 N----GWRVELSHN---SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGR 114
+ +VE+SH+ + G GG+G +CY CG+ GH++++C G+
Sbjct: 64 DFEGVKLKVEMSHSKVRQKPGMGGKG-----------ECYRCGKEGHWSKDCPKGPSRGK 112
Query: 115 RRSRSPRYR 123
R P YR
Sbjct: 113 PRGPEPPYR 121
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA--RRPPGYAFIDFDDYRDAQDAIRELD 59
+RVYVGNL + R++ED F +G IR + V RPP +AF+DF+D RDA+DAIR D
Sbjct: 4 TRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRD 63
Query: 60 G 60
G
Sbjct: 64 G 64
>gi|294893816|ref|XP_002774661.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239880054|gb|EER06477.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 147
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VYVGNL+ E +LE F+ +G I SVWVAR PPG+AF+ F+D RDA DA R DGK+
Sbjct: 6 KVYVGNLEEGTREEELEKVFKRYGGIESVWVARNPPGFAFVTFEDARDADDACRGEDGKD 65
>gi|281201086|gb|EFA75300.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 305
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+YVG + +R S +L+D F+ FG + S+ + GYAF++F D + A DAI ++ +
Sbjct: 69 RIYVGRISTRTSREELQDNFKRFGEVLSMDIK---TGYAFVEFKDEKSANDAINAMNNTD 125
Query: 63 --GWRVELSHNSRGGGG----------GRG------------GGRGRSGGSDLKCYECGE 98
G R+ + S GG GRG G G G D+KCY C
Sbjct: 126 LDGERI-IVQKSHGGRKRTSDECYICRGRGHWARSCPRNNSSGSSGGRGSRDIKCYTCNG 184
Query: 99 PGHFARECRLRGGSG 113
GH ARECR R SG
Sbjct: 185 YGHIARECRGRRDSG 199
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA++A DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 62 NG----WRVELSHNSRGGGG 77
N RVE +H RG GG
Sbjct: 69 NFDGHRLRVEPAHGGRGNGG 88
>gi|291244600|ref|XP_002742185.1| PREDICTED: alternative splicing factor SRp20/9G8, putative-like
[Saccoglossus kowalevskii]
Length = 275
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-RPPGYAFIDFDDYRDAQDAIRELDG 60
+++++G L + +RDLED F +G + V YAF+D++D RDA+DAI+ +G
Sbjct: 7 AQLFIGRLSKQTRQRDLEDIFTAYGRLSRCDVKYGTGMAYAFVDYEDRRDAEDAIKYENG 66
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR--LRGGSGRRRSR 118
+ E+ S RG RG D +CY+C GH+AR+CR G GR R
Sbjct: 67 R-----EVCGQSIVVEWARGPRRGFVQAED-ECYKCHRSGHWARDCRDPRYAGFGRTSFR 120
Query: 119 SP 120
SP
Sbjct: 121 SP 122
>gi|226467596|emb|CAX69674.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++Y+G L V + DL E G + VWVAR PPG+AF ++ DA+ A+R LDG N
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 63 G----WRVELSHNSRGGGGGRGGGRG 84
RVE +H R R RG
Sbjct: 71 VCGSRIRVEFAHGGRSKSAVRSAFRG 96
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
SRVYVG L+ V ERDLE F+ FG IR + + G+ F++FDD+RDA DA+ EL+G
Sbjct: 2 TSRVYVGRLNYEVRERDLERFFKGFGRIREISIKN---GFGFVEFDDHRDADDAVYELNG 58
Query: 61 K 61
K
Sbjct: 59 K 59
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AF++F D RDA DA L+G+
Sbjct: 11 TRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKH---DFAFVEFSDPRDADDARYSLNGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G G G GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSG-RCFNCGIDGHWARDCK 118
>gi|395334012|gb|EJF66388.1| hypothetical protein DICSQDRAFT_123087 [Dichomitus squalens
LYAD-421 SS1]
Length = 503
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 15/122 (12%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+++VY+G L + DLE F G I ++ + GY F++FD A++++ +
Sbjct: 115 LNKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV---GYGFVEFDSREAAEESVAKYHE 171
Query: 61 K----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
N RVE+SH GGGR + G C++CG+ GH+AREC +GRR
Sbjct: 172 GYFMGNKIRVEISH-----GGGR---TAKYSGDPGACFKCGQMGHWARECPNHLAAGRRP 223
Query: 117 SR 118
S
Sbjct: 224 SH 225
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 21/117 (17%)
Query: 4 VYVGNLDSRVSERDLEDEF--------RVFGVIRSV--WVARRPPGYAFIDFDDYRDAQD 53
+YVGNL + ER+++D F R++G I + + RPPG+AF++F+D RDA+D
Sbjct: 9 IYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 68
Query: 54 AIRELDGKNG----WRVELSHNSRGG-------GGGRGGGRGRSGGSDLKCYECGEP 99
AI DG N RVEL+H RG G RG S SD + G P
Sbjct: 69 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 125
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 9/73 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWV---ARRPPGYAFIDFDDYRDAQDAIR---- 56
VYVGNL S V E+++ED F +G IR++ + +R P +AFI FDD RDA++A+R
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDG 65
Query: 57 -ELDGKNGWRVEL 68
E DGK RVE
Sbjct: 66 YEFDGKR-LRVEF 77
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA++AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 NG----WRVELSHNSRGGG 76
N RVE +H RG
Sbjct: 69 NFDGHRLRVEAAHGGRGNA 87
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F FG I + + RPPGYAF+ F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAEDAIYYRDGY 68
Query: 62 NG----WRVELSHNSRG 74
+ RVEL+H RG
Sbjct: 69 DFDGFRLRVELAHGGRG 85
>gi|324502984|gb|ADY41304.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 122
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+G L R SERD+E FR +G IR + + G+ F++FDD RDA DA+ EL+GK
Sbjct: 3 ARVYIGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 59
Query: 62 N--GWRVELSHNSRGGGG 77
+ G R+ L + RG G
Sbjct: 60 DLCGERIILEFSRRGPRG 77
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 35/136 (25%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIRE 57
R ++GNL ++ L+D FR FG + V + R G+AF+ FD+ +D + AI +
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 58 LDG---------------------KNGWRV----ELSHNSRG--GGGGRGGGRGRSGGSD 90
++G +NG R S N RG GGGR RG GG D
Sbjct: 68 MNGLDLDGRAITVDKAQPQGAGRDRNGDRDYDRDRGSRNDRGRDSGGGRAP-RGSGGGGD 126
Query: 91 LKCYECGEPGHFAREC 106
C++CG+PGHFAREC
Sbjct: 127 --CFKCGKPGHFAREC 140
>gi|51971529|dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + R YAF+ F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVVFGDPRDADDARHYLDGR 67
Query: 62 --NGWRVELSHNSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ + + G R RG G+ +C+ CG GH+AR+C
Sbjct: 68 DFDGSRITVEFSRGAPRGSRDFDSRGPPPGAG-RCFNCGVDGHWARDC 114
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ FG IR + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N 62
Sbjct: 61 E 61
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V N+ SR+S +DL+D R G + ++ ++F + D + AI +LDG
Sbjct: 110 RLIVENVSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFATHSDMRAAIEKLDGTE 169
Query: 62 -NGWRVELSHN 71
NG RV L +
Sbjct: 170 LNGRRVRLVED 180
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGY 68
Query: 62 NG----WRVELSHNSRGG 75
N RVE +H RG
Sbjct: 69 NFDGHRLRVEAAHGGRGN 86
>gi|393910312|gb|EJD75816.1| hypothetical protein LOAG_17122 [Loa loa]
Length = 190
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD- 59
+ R+++ N D + + DL+D F FG I +VW+A PP +AF+ F DA DA++E++
Sbjct: 45 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADALKEMNN 104
Query: 60 ---GKNGWRVELSHNSRGGG 76
G+N +V +H R G
Sbjct: 105 AYIGRNKIKVATAHPPRKPG 124
>gi|72160170|ref|XP_788983.1| PREDICTED: uncharacterized protein LOC584006 [Strongylocentrotus
purpuratus]
Length = 300
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+YVG+L+ ++ D+E EF +G + +W+AR PPG+AF++F+ A+ A++EL+G+
Sbjct: 9 RLYVGSLNHSTTKDDVEREFGKYGHLVDIWMARNPPGFAFVEFETAGQAEAALKELNGRT 68
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 22/122 (18%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK-- 61
++VGN+ + + +L DEF FG + YAFI+F D RDA+DA+ EL+G+
Sbjct: 3 LFVGNISRSMRQDELHDEFDKFGSCSINFKG----SYAFIEFKDERDAEDALTELNGREF 58
Query: 62 NGWRVELSHNSRGG----------------GGGRGGGRGRSGGSDLKCYECGEPGHFARE 105
+G R+ + + + G G GRG G + C+ CG+PGHFAR+
Sbjct: 59 SGQRLAIEWSKKSGRFDAANASRGRGRDSRDRGSDRGRGGDRGGNKDCFNCGKPGHFARD 118
Query: 106 CR 107
CR
Sbjct: 119 CR 120
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 ----NGWRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHHLRVELAHGGR 84
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 N----GWRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHHLRVELAHGGR 84
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella
moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella
moellendorffii]
Length = 298
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V E +++D F +G I + + RPPGYAFI+FDD RDA+DAI+ DG
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 62 ----NGWRVELSHNSRGGGGGRGGGR 83
+ RVE +H+ G GG R
Sbjct: 68 VFDGHRLRVEFAHSGGRGHPSYGGDR 93
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGY-AFIDFDDYRDAQDAIRELDGK 61
RV V L S S +DL+D R G + V R G +DF +Y D ++AIR+LD
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDT 181
Query: 62 NGWRVELSHN 71
+R SH+
Sbjct: 182 E-FRNPFSHS 190
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + V RPPGYAF++F+D RDA++AI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGY 68
Query: 62 NG----WRVELSHNSRGGG 76
N RVE +H RG
Sbjct: 69 NFDGHRLRVEAAHGGRGNA 87
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 12/85 (14%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVYVG L + ERD+E FR FG IR + + G+ F++F+DYRDA DA+ EL+GK
Sbjct: 43 RVYVGRLSYQARERDVERFFRGFGRIREINLKN---GFGFVEFEDYRDADDAVYELNGKE 99
Query: 63 --GWRVELSHNSRGGGGGRGGGRGR 85
G RV + H RG RGR
Sbjct: 100 LVGERVIIEH-------ARGPARGR 117
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++A+ +LDG
Sbjct: 168 RIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNEGIVEFATYSDMKNAVEKLDGTE 227
Query: 62 -NGWRVELSHN 71
NG R++L +
Sbjct: 228 INGRRIKLVED 238
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella
moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella
moellendorffii]
Length = 288
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL V E +++D F +G I + + RPPGYAFI+FDD RDA+DAI+ DG
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 62 ----NGWRVELSHNSRGGGGGRGGGR 83
+ RVE +H+ G GG R
Sbjct: 68 VFDGHRLRVEFAHSGGRGHPSYGGDR 93
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGY-AFIDFDDYRDAQDAIRELDGK 61
RV V L S S +DL+D R G + V R G +DF +Y D ++AIR+LD
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDT 181
Query: 62 NGWRVELSHN 71
+R SH+
Sbjct: 182 E-FRNPFSHS 190
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
V+VGNL V ER++ED F +G IRSV + RPP +AF++F+D RDA DA+R DG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 62 NG----WRVELSH 70
RVE+SH
Sbjct: 61 EFQGQRLRVEISH 73
>gi|312073828|ref|XP_003139695.1| hypothetical protein LOAG_04110 [Loa loa]
Length = 300
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD- 59
+ R+++ N D + + DL+D F FG I +VW+A PP +AF+ F DA DA++E++
Sbjct: 155 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADALKEMNN 214
Query: 60 ---GKNGWRVELSHNSRGGG 76
G+N +V +H R G
Sbjct: 215 AYIGRNKIKVATAHPPRKPG 234
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR--RPPGYAFIDFDDYRDAQDAIREL 58
M+R+Y+GNL V+E+D++D F FG I + + RPP + FI F D RDA++A+R
Sbjct: 1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRAR 60
Query: 59 DGKNG----WRVELS 69
DG + RVE+S
Sbjct: 61 DGYDMDGSRLRVEIS 75
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHRLRVELAHGGR 84
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L R SERD+E FR +G IR + + G+ F++FDD RDA DA+ EL+GK
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 62
Query: 62 N--GWRVELSHNSRG 74
G RV L + RG
Sbjct: 63 ELCGERVILEFSRRG 77
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L R SERD+E FR +G IR + + G+ F++FDD RDA DA+ EL+GK
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 62
Query: 62 N--GWRVELSHNSRG 74
G RV L + RG
Sbjct: 63 ELCGERVILEFSRRG 77
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL S + E ++ED F +G I + + RPP Y F++F++ RDA+DAIR DG
Sbjct: 9 IYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVGNL V ERD+E F+ +G IR V + GY F++FDD RDA D + ++DGK
Sbjct: 5 SRVYVGNLPENVRERDVEKLFKEYGRIREVVIK---SGYGFVEFDDPRDADDVVNDMDGK 61
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA++A DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 62 NG----WRVELSHNSRGGGG 77
N RVE +H RG GG
Sbjct: 69 NFDGHRLRVEPAHGGRGNGG 88
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L+ V ERDLE F+ +G I V + GY F++FDDYRDA+DA+ +L+GK
Sbjct: 3 TRVFVGRLNYDVRERDLEKFFKGYGRIGEVLLKN---GYGFVEFDDYRDAEDAVHDLNGK 59
Query: 62 N--GWR--VELSHNS-RGGGGGRGGG 82
G R VEL+ RG G G GG
Sbjct: 60 KLMGERISVELARGIRRGPGTGYGGA 85
>gi|324536071|gb|ADY49444.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 92
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+G L R SERD+E FR +G IR + + G+ F++FDD RDA DA+ EL+GK
Sbjct: 3 ARVYIGRLSYRASERDIEHLFRGYGRIRDIVLKN---GFGFVEFDDPRDADDAVYELNGK 59
Query: 62 N--GWRVELSHNSRGGGG 77
+ G R+ L + RG G
Sbjct: 60 DLCGERIILEFSRRGPRG 77
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SR+YVGNL + V +D+ED F FG + V + +RPP +AF++F+D RDA+DA+R DG
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 61 KNGW 64
+ +
Sbjct: 65 YDFY 68
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIRELDG 60
RVYVGNL S +R++E+EF FG I+ V R G +AF++F+D RDA+DAI+E DG
Sbjct: 9 RVYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDG 68
Query: 61 KNG----WRVELSHNSRG 74
RVE+ + RG
Sbjct: 69 YEFKGSRLRVEVPFSDRG 86
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPP-----GYAFIDFDDYRDAQDAIREL 58
+YV NL RV+E +L D F FG + V P G+AF+ F+D RDA DA++EL
Sbjct: 31 LYVANLAHRVTETELNDLFAKFGRLEKCEVITDPISRESRGFAFVTFEDVRDANDAVQEL 90
Query: 59 DGKN--GWRVELSHNSRGGGGGRGGGR 83
+GK+ G R+ + H R G + GR
Sbjct: 91 NGKDIQGRRIRVEHARRKRGHTKTPGR 117
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M +V++GNL R RD+ED FR FG I+ + + G+ F++FDD RDA+DAI E++G
Sbjct: 1 MGKVFIGNLTDRAEGRDVEDAFRKFGRIKEISL---KNGFGFVEFDDVRDAEDAIHEMNG 57
Query: 61 K 61
+
Sbjct: 58 E 58
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 12/85 (14%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVYVG L + ERD+E FR FG IR + + G+ F++F+DYRDA DA+ EL+GK
Sbjct: 5 RVYVGRLSYQARERDVERFFRGFGRIREINLKN---GFGFVEFEDYRDADDAVYELNGKE 61
Query: 63 --GWRVELSHNSRGGGGGRGGGRGR 85
G RV + H RG RGR
Sbjct: 62 LVGERVIIEH-------ARGPARGR 79
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++A+ +LDG
Sbjct: 121 RIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKNEGIVEFATYSDMKNAVEKLDGTE 180
Query: 62 -NGWRVEL 68
NG R++L
Sbjct: 181 INGRRIKL 188
>gi|324507194|gb|ADY43052.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L R ERD+E FR +G I V + GYAF++F DYRDA DA+R+L+G+
Sbjct: 3 ARVYVGRLSFRAQERDVERFFRGYGHISEVLMKN---GYAFVEFTDYRDADDAVRDLNGR 59
Query: 62 NGW 64
+ +
Sbjct: 60 SLF 62
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AFI+F D RDA +A L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKH---DFAFIEFSDPRDADEARYYLNGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG------GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G G GG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGSG-RCFNCGNDGHWARDCK 120
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLED F +G +R V + +AFI+F D RDA +A L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKH---DFAFIEFSDPRDADEARYYLNGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG------GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G G GG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGSG-RCFNCGNDGHWARDCK 120
>gi|170085409|ref|XP_001873928.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651480|gb|EDR15720.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 477
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD-- 59
++VY+G L + DL+ F G+I ++ + GY F++FD A++++ +
Sbjct: 121 NKVYIGGLPEHTRQEDLQSCFGKIGIITNIELKV---GYGFVEFDTREAAEESVAKYHEG 177
Query: 60 --GKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
N RVELSH GGGR + G C++CG+ GH+AREC G +R
Sbjct: 178 FFMGNKIRVELSH-----GGGRTA---KYAGDPGACFKCGQMGHWARECPNHTGLAPQR 228
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
SRVYVG L+ V ERDLE F+ FG IR + + G+ F++FDD+RDA DA+ EL+G
Sbjct: 2 TSRVYVGRLNYEVRERDLERFFKGFGRIREISIKN---GFGFVEFDDHRDADDAVYELNG 58
Query: 61 K 61
K
Sbjct: 59 K 59
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2
[Acyrthosiphon pisum]
Length = 309
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+Y+G+L V ERD++ F+ FG I+ + + GY FI+FDDYRDA DA+ EL+G+
Sbjct: 5 SRIYIGHLPYGVRERDVKKFFKGFGRIKEILLKN---GYGFIEFDDYRDADDAVYELNGR 61
Query: 62 --NGWRVEL 68
NG RV +
Sbjct: 62 ELNGERVSV 70
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D + A+ +LD
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKNEGVVEFASYSDLKTALDKLDDTE 180
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 181 LNGRRIRL 188
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+YVG L V ERD+E FR +G I V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 4 RIYVGRLSYSVRERDIERFFRNYGRIVDVLLKN---GYGFVEFDDYRDADDAVYELNGKE 60
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 61 LCGERVVIEH 70
>gi|403353670|gb|EJY76377.1| hypothetical protein OXYTRI_02116 [Oxytricha trifallax]
Length = 301
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 39 GYAFIDFDDYRDAQDAIRELDGKN--GWRVELSHNSRGG----GGGRGGGRGRSGGSDLK 92
YAFI+FD+ RDA++A+ EL GK+ G ++ + + + G + R DLK
Sbjct: 102 NYAFIEFDNERDAEEAVDELQGKDMGGLKINIEWSKKSGRFNAKDSKRPQRSERSRDDLK 161
Query: 93 CYECGEPGHFARECR 107
CY C + GHFAR+CR
Sbjct: 162 CYNCNKTGHFARDCR 176
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIREL 58
MSR+Y+GNL + E+DLED F +G I + + RPP + F+ F+D RDA +A+R
Sbjct: 53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRAR 112
Query: 59 DGKNG----WRVELSHNSR 73
DG + RVE+S R
Sbjct: 113 DGYDFDGYRLRVEMSRGKR 131
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + + E ++ED F +G I V + RPP Y F++F++ RDA+DAIR DG
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA++A DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 62 NG----WRVELSHNSRGGGG 77
N RVE +H RG GG
Sbjct: 69 NFDGHRLRVEPAHGGRGNGG 88
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L ERDLE FR +G R V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 57 TRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKN---GYGFVEFDDYRDADDAVYELNGK 113
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 114 ELLGERITV---ERARGTPRGSDQWRYGDS 140
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 188 RLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTE 247
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 248 LNGRRIRL 255
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-ARRPPGYAFIDFDDYRDAQDAI-----R 56
++++GNL +RDLE+ F+ +G ++ + + A Y FI+F D+RDA+DA+
Sbjct: 24 KLFIGNLSKDADKRDLENIFKKYGTVKEIKIKATGSNHYGFIEFQDHRDAKDALDDCNNM 83
Query: 57 ELDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
E GK R+E H GG R R C+ CG H ++C
Sbjct: 84 EFKGK-QIRLEFGH---------GGKRRREN-----CFNCGYSNHATKDC 118
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDSSYGSGRSG 85
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVEL 68
NG ++ L
Sbjct: 165 VNGRKIRL 172
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAI--RELD 59
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI R+
Sbjct: 198 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRY 257
Query: 60 GKNGW--RVELSHNSRGGGGGRGGGRGRSGG 88
+G+ RVEL+H RG R S G
Sbjct: 258 NFDGYRLRVELAHGGRGQSYSYDRPRSYSSG 288
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVG+L + +D+E F +G IR V + Y F++F + RDA DA ELDG+
Sbjct: 39 TKLYVGHLSTHTRTKDVEYLFGRYGRIRCVELKH---DYGFVEFSNPRDADDARYELDGQ 95
Query: 62 --NGWRVELSH---NSRGGGGGRG-GGRGRSGGSDLKCYECGEPGHFAREC 106
+G R+ + RG GG R GRG GS +C+ CG GH+AR+C
Sbjct: 96 DVDGSRIIVEFARGTPRGPGGSREYLGRGPPPGSG-RCFNCGIDGHWARDC 145
>gi|448878405|gb|AGE46165.1| arginine/serine-rich splicing factor RS2Z37 transcript I
[Physcomitrella patens subsp. patens]
Length = 331
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+R+YVG L +R RDLED F +G +R V V +AF++F D RDA DA ++G
Sbjct: 42 ATRLYVGRLSTRTRSRDLEDLFAKYGRVRDVDVKH---DFAFVEFADARDADDARHYVNG 98
Query: 61 K--NGWRVELSHNSRGGGGGRGG-----GRGRSGGSDLKCYECGEPGHFARECR 107
K +G R+ + RG G GG GRG G+ +CY CG GH+AR+C+
Sbjct: 99 KDFDGNRLIVEFARRGPRGASGGAREYLGRGPPPGTG-RCYNCGNDGHWARDCK 151
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 1 MSR-VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRE 57
M+R +YVGNL V E ++ED F +G I V V RPPGY FI+F+D RDA+DAIR
Sbjct: 5 MTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRG 64
Query: 58 LDGKNG----WRVELSHNSR 73
DG N RVE +H R
Sbjct: 65 RDGYNFDGHRIRVEFAHGGR 84
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVG L +R +D+E F +G +R+V + Y F++F D RDA DA ELDG+
Sbjct: 39 TKLYVGRLSTRTRTQDVEYLFGRYGRVRNVELKH---DYGFVEFSDPRDADDARYELDGR 95
Query: 62 --NGWR--VELSHNSRGGGGGRGGGRGRS-GGSDLKCYECGEPGHFARECR 107
+G R VE + + G GG GRS +C+ CG GH+AR+C+
Sbjct: 96 DFDGSRIIVEFAKGTPRGPGGSFNYVGRSLPPGSGRCFNCGIEGHWARDCK 146
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
Length = 125
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S VYV NLD ++ DL F G + V V R+ G AFI F DA+ A++
Sbjct: 10 STVYVSNLDFSLTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKAVK 69
Query: 57 ELDG----KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+DG K +V ++ ++ G R R + +CYECGE GH + EC
Sbjct: 70 AMDGVVLNKRTLKVSIAQDN---GRAREFIRRKVYKDKSRCYECGEDGHLSYEC 120
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+RV++G+L +V ERD++ F+ +G + + + G+ F++F+D+RDA DAI++L+G
Sbjct: 2 TTRVFIGHLSYQVRERDVDRFFKGYGRVGDIHLKN---GFGFVEFEDHRDADDAIKDLNG 58
Query: 61 KNGW----RVELSHNSRGGGGGR 79
K VEL+H SR G GGR
Sbjct: 59 KELLGERVSVELAHGSRRGPGGR 81
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++ V NL S VS +DL+D R G + P ++F +Y D ++A+ +LD +
Sbjct: 114 QLIVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQGIVEFSNYADMRNALNKLDNTD 173
Query: 63 --GWRVEL 68
G R++L
Sbjct: 174 LSGRRIKL 181
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVGNL V ERD+E F+ +G IR V + GY F++FDD RDA D + ++DGK
Sbjct: 5 SRVYVGNLPENVRERDVEKFFKEYGRIREVVIKS---GYGFVEFDDPRDADDVVNDMDGK 61
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+RV++G+L +V ERD++ F+ +G + + + G+ F++F+D+RDA DAI++L+G
Sbjct: 2 TTRVFIGHLSYQVRERDVDRFFKGYGRVGDIHLKN---GFGFVEFEDHRDADDAIKDLNG 58
Query: 61 KNGW----RVELSHNSRGGGGGR 79
K VEL+H SR G GGR
Sbjct: 59 KELLGERVSVELAHGSRRGPGGR 81
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++ V NL S VS +DL+D R G + P ++F +Y D ++A+ +LD +
Sbjct: 116 QLVVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQGIVEFSNYADMRNALNKLDNTD 175
Query: 63 --GWRVEL 68
G R++L
Sbjct: 176 LSGRRIKL 183
>gi|302816982|ref|XP_002990168.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
gi|300142023|gb|EFJ08728.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
Length = 124
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S VYV NLD ++ DL F G + V V R+ G AFI F DA+ A++
Sbjct: 9 STVYVSNLDFALTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKAVK 68
Query: 57 ELDG----KNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+DG K +V ++ ++ G R R + +CYECGE GH + EC
Sbjct: 69 AMDGVVLNKRTLKVSIAQDN---GRAREFIRRKVYKDKSRCYECGEDGHLSYEC 119
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA--RRPPGYAFIDFDDYRDAQDAIRELDG 60
R+Y+GNL S + ERDLED F +G I S+ + RR P +AF++F+D RDA+DAI DG
Sbjct: 8 RIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAI---DG 64
Query: 61 KNGW 64
++G+
Sbjct: 65 RDGY 68
>gi|402590530|gb|EJW84460.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD- 59
+ R+++ N D + + DL+D F FG I +VW+A PP +AF+ F DA DA++E++
Sbjct: 153 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNN 212
Query: 60 ---GKNGWRVELSHNSRGGG 76
G+N +V +H R G
Sbjct: 213 AYIGRNKIKVATAHPPRKPG 232
>gi|170584455|ref|XP_001897015.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595605|gb|EDP34147.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 304
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD- 59
+ R+++ N D + + DL+D F FG I +VW+A PP +AF+ F DA DA++E++
Sbjct: 149 LGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNN 208
Query: 60 ---GKNGWRVELSHNSRGGG 76
G+N +V +H R G
Sbjct: 209 AYIGRNKIKVATAHPPRKPG 228
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 21/105 (20%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L S + E DLE+ F+ +G IR + + GY F++FD+ RDA DA+ +L+GK
Sbjct: 4 TRVYVGQLTSDIRENDLENFFKGYGRIREITLKN---GYGFVEFDERRDADDAVHDLNGK 60
Query: 62 ----NGWRVELSHN-SRGG-------------GGGRGGGRGRSGG 88
RVE++H SR G RG R R GG
Sbjct: 61 PLLGEKIRVEMAHRFSRDRFASGRGGGFRGRYNGDRGYDRSRHGG 105
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + RPPGYAF++F+D DA+ AIR LDG
Sbjct: 8 LYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRGLDGY 67
Query: 62 NG----WRVELSHNSR 73
N RVEL+H R
Sbjct: 68 NFDACRLRVELAHGGR 83
>gi|23208529|gb|AAN15784.1| RNA binding-like protein [Galleria mellonella]
Length = 57
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Query: 18 LEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSH 70
+E F +G IR+VWVAR PPG+AF++F+D RDA+D++R LDG RVE+S+
Sbjct: 1 IEKVFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSN 57
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + RPPGYAF++F++ RDA+DAIR DG
Sbjct: 8 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 67
Query: 62 NG----WRVELSHNSR 73
N RVEL+H R
Sbjct: 68 NFDGCRLRVELAHGGR 83
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G + + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 62 N----GWRVELSHNSR 73
+ RVEL+H R
Sbjct: 69 DFDGHHLRVELAHGGR 84
>gi|409051294|gb|EKM60770.1| hypothetical protein PHACADRAFT_246886 [Phanerochaete carnosa
HHB-10118-sp]
Length = 447
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L + DLE F G I ++ + GY F++FD A++++ +
Sbjct: 67 NKVYIGGLPEHTRKEDLESCFGKIGKIVAIELKV---GYGFVEFDSREAAEESVAKYHEG 123
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRS 117
N RVELSH GGGR G+ C++CG+ GH+AREC RRS
Sbjct: 124 FFMGNKIRVELSH-----GGGRTAKYSNDPGA---CFKCGQVGHWARECPNSTTGDSRRS 175
Query: 118 RSP 120
+P
Sbjct: 176 SAP 178
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L ERDLE FR +G R V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 57 TRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKN---GYGFVEFDDYRDADDAVYELNGK 113
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 114 ELLGERITV---ERARGTPRGSDQWRYGDS 140
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 188 RLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTE 247
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 248 LNGRRIRL 255
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL + R++ED F G I+ + + RPP YAFIDF+D RDA+DAI DG
Sbjct: 4 RIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEARDG 63
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + + E +ED F +G I V + RPP Y F++F++ RDA+DAIR DG
Sbjct: 9 IYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGSRLRVELAHGGRG 85
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
SRVYVG L+ V ERDLE F+ FG IR + + G+ F++FDD RDA DA+ EL+G
Sbjct: 2 TSRVYVGRLNYDVRERDLERFFKGFGRIREISIKN---GFGFVEFDDPRDADDAVYELNG 58
Query: 61 KN 62
K+
Sbjct: 59 KD 60
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVEL 68
NG ++ L
Sbjct: 165 VNGRKIRL 172
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
SRVYVG L+ V ERDLE F+ FG IR + + G+ F++FDD RDA DA+ EL+G
Sbjct: 2 TSRVYVGRLNYDVRERDLERFFKGFGRIREISIKN---GFGFVEFDDPRDADDAVYELNG 58
Query: 61 KNGW----RVELSHNSRGGG 76
K+ VEL+ R G
Sbjct: 59 KDLMGDRVSVELARGIRRGA 78
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L + DLE F G I ++ + GY F++FD+ A++++ +
Sbjct: 97 NKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV---GYGFVEFDNREAAEESVAKYHEG 153
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRR 115
N RVE+SH GGGR + G C++CG+ GH+AREC +GRR
Sbjct: 154 YFMGNKIRVEISH-----GGGR---TAKYSGDPGACFKCGQMGHWARECPNHLAAGRR 203
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + R YAF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYNLDGR 67
Query: 62 --NGWR--VELSH---------NSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+G R VE + GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DVDGSRLIVEFAKGVPRGSREGGGGRDRDREYMGRGPPPGS-GRCFNCGIDGHWARDCK 125
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M+RVYVG L R ERD+E FR FG IR V + G+ F++FDD RDA+DAI EL+
Sbjct: 1 MTRVYVGRLSYRARERDVEHFFRGFGKIREVTLKN---GFGFVEFDDPRDAEDAIYELNN 57
Query: 61 KN 62
++
Sbjct: 58 RD 59
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP-PGYAFIDFDDYRDAQDAIRELDGK 61
R+ + NL SR + RD++D R G + ++ G +DF Y D +DA++ LDG
Sbjct: 105 RLVINNLSSRATWRDIKDYMRQAGDVTFADAHKQLGEGRGVVDFATYDDMKDALKRLDGT 164
Query: 62 N--GWRVELSHN 71
G +V L+ +
Sbjct: 165 ELCGRKVRLTED 176
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 15/99 (15%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L +ERDLE FR +G +R V + GY F++FDD+RDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKN---GYGFVEFDDHRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGR---SGGSDLKCYE 95
G RV + RG RGR S SD + +E
Sbjct: 61 KLLGERVTVER-------ARGTPRGRDQWSSRSDHRSHE 92
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 103 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSDLKNAIEKLDDTE 162
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 163 LNGRRIRL 170
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 23/113 (20%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVGN+ ++DL+D F FG + + + Y F+ D+ +DA DAI+ L
Sbjct: 21 TKLYVGNVPQPARKKDLQDLFEKFGKVNECDIIK---NYGFVHMDNEQDANDAIKALTNT 77
Query: 62 NGW-----RVELSHN---SRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
W VE+S + ++ G G RG +CY CG+ GH++R+C
Sbjct: 78 E-WMGTRITVEMSKSKVRTQPGQGSRG-----------ECYRCGKMGHWSRDC 118
>gi|115462263|ref|NP_001054731.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|46981336|gb|AAT07654.1| unknown protein [Oryza sativa Japonica Group]
gi|113578282|dbj|BAF16645.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|215693366|dbj|BAG88748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768462|dbj|BAH00691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630300|gb|EEE62432.1| hypothetical protein OsJ_17224 [Oryza sativa Japonica Group]
Length = 338
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+YVG++ R DLE+ F +G +R V + Y F++F D RDA DA +LDG+
Sbjct: 18 SRLYVGHISLRTRAEDLENLFSRYGRVRFVDLKNE---YGFVEFSDPRDANDARLDLDGR 74
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ V+ + G GG G + R C+ CG GH+ R C
Sbjct: 75 KYDGSDIIVQFARGVERGLGGSRGYKARPAHGSDHCFNCGMEGHWHRNC 123
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L ERDLE FR +G R V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 57 TRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKN---GYGFVEFDDYRDADDAVYELNGK 113
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 114 ELLGERITV---ERARGTPRGSDQWRYGDS 140
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 188 RLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTE 247
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 248 LNGRRIRL 255
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+RV++G+L +V E+DL+ F+ +G + + + G+ F++FDD+RDA DAI +L+G
Sbjct: 2 TTRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKN---GFGFVEFDDHRDADDAISDLNG 58
Query: 61 KNGW----RVELSHNSRGGGGGR 79
K VEL++ SR G GGR
Sbjct: 59 KELLGERVSVELAYGSRRGPGGR 81
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++ V NL S VS +DL+D R G + + P ++F +Y D ++AI +LD +
Sbjct: 114 QLIVENLSSHVSWQDLKDYMRQAGEVTYADAHKIRPNEGVVEFANYSDMKNAISKLDNTD 173
Query: 63 --GWRVEL 68
G R+ L
Sbjct: 174 LSGRRIRL 181
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|449465308|ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 26/129 (20%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIRE 57
R++VG L +SER LE+ F FG + + RP G+ FI F D R DAIRE
Sbjct: 8 RIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGMDDAIRE 67
Query: 58 LDGKNGWRVELSHNS--------------------RGGGGGRGGGRGRSGGSDLKCYECG 97
+ G+ +S N GG G G+ RS G D +C++CG
Sbjct: 68 MHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQD-ECFKCG 126
Query: 98 EPGHFAREC 106
PGH+AR+C
Sbjct: 127 RPGHWARDC 135
>gi|239790646|dbj|BAH71871.1| ACYPI003349 [Acyrthosiphon pisum]
Length = 160
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L RV ERDLE F+ G ++ + + GYAF++FDDYRDA DA+ EL+G+
Sbjct: 5 TRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKN---GYAFVEFDDYRDADDAVYELNGR 61
Query: 62 --NGWRVEL 68
NG RV +
Sbjct: 62 ELNGERVSV 70
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+G L V +RD+E F+ +G IR + + GY F++FDDYRDA DA+ EL+GK
Sbjct: 4 TRVYIGGLPYGVKDRDIERFFKGYGRIRDILIKN---GYGFVEFDDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGR 83
+ G RV + R G RG R
Sbjct: 61 DLLGERVSV---ERARGTPRGSDR 81
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIRELDGK 61
+Y+G L + + RDL++ F V+G I+ + ++ G +AFI+F + RDA DA++ L+G
Sbjct: 3 LYIGGLTAETNARDLDNLFSVYGTIQRNDI-KKTSGRCFAFIEFKERRDADDALKALNGA 61
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G ++ + +GGG+ D KC+ C + GH+A++C
Sbjct: 62 KLLGSKITVE-------WSKGGGK----APDNKCFTCQQSGHWAKDC 97
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVEL 68
NG ++ L
Sbjct: 165 VNGRKIRL 172
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 68
Query: 61 -KNGWRVELSHNSRGGGGGRGGGRGRSGGSD 90
+G+R+ + RGGG G G R G SD
Sbjct: 69 DYDGYRLRVEF-PRGGGPGSYRG-SRQGNSD 97
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYVGKLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K+ G RV + H
Sbjct: 58 KDLCGKRVIVEHT 70
>gi|72012937|ref|XP_780865.1| PREDICTED: uncharacterized protein LOC575368 [Strongylocentrotus
purpuratus]
Length = 200
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVI-RSVWVARRPPGYAFIDFDDYRDAQDAIRELD 59
+++++G L +RD+ED F +G + R YAF+D+ D RDA+DAI+ +
Sbjct: 2 TAQLFIGRLSKNTRQRDVEDMFDYYGKMSRCELKFGSGMAYAFVDYVDKRDAEDAIKHEN 61
Query: 60 GKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
GK EL+ S RG RG D +CY CG GHFAR+C
Sbjct: 62 GK-----ELNGQSIVVEWARGPKRG---FEDDECYRCGRRGHFARDC 100
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVEL 68
NG ++ L
Sbjct: 165 VNGRKIRL 172
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++FDD RDA+DA+ DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 102
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L ERDLE FR +G R V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 57 TRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKN---GYGFVEFDDYRDADDAVYELNGK 113
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 114 ELLGERITV---ERARGTPRGSDQWRYGDS 140
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 188 RLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTE 247
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 248 LNGRRIRL 255
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Monodelphis domestica]
Length = 491
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++FDD RDA+DA+ DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 102
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S VYV NLD ++ DL F FG I V + R G AFI + DA A++
Sbjct: 19 STVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAAVK 78
Query: 57 ELDGK--NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
++GK N +++S + G + R R +CYECGE GH + EC
Sbjct: 79 TMNGKILNKRTLKVS-IAEDNGRAKEFIRRREYKDKSRCYECGEGGHLSYEC 129
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + +AF++F D RDA DA L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKH---DFAFVEFSDPRDADDARYNLNGR 67
Query: 62 --NGWRVELSHNSRGGGGGRGG-----GRGRSGGSDLKCYECGEPGHFARECR 107
+G R+ + G GG GG GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSG-RCFNCGIDGHWARDCK 119
>gi|388291|gb|AAA28729.1| RNA binding protein, partial [Drosophila melanogaster]
Length = 43
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDF 45
RVYVGNL +V + DLE EF +G + SVW+A PPG+AF++F
Sbjct: 1 RVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEF 43
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGS-DLKCYECGEPG 100
RVE +H RG RSG S D G P
Sbjct: 69 KFDGCRLRVEFAHGGRGHSSS-VDRYSRSGSSRDFAVLVTGLPS 111
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG VI RR P +AF++FDD RDA+DA+ DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 102
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++FDD RDA+DA+ DG
Sbjct: 11 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 70
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 71 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 103
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + +AF++F D RDA DA L+G+
Sbjct: 11 TRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKH---DFAFVEFSDPRDADDARYNLNGR 67
Query: 62 --NGWR--VELSHNSRGGGGGRGG---GRGRSGGSDLKCYECGEPGHFARECR 107
+G R VE + GG G GRG GS +C+ CG GH+AR+C+
Sbjct: 68 DFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSG-RCFNCGIDGHWARDCK 119
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 16/93 (17%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + RPPGYAF++F+D RDA+DAI DG
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRGGGGGRGGGRGRSGGSD 90
RVE +H GGRG S D
Sbjct: 69 KFDGCRLRVEFAH----------GGRGHSSSVD 91
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG VI RR P +AF++FDD RDA+DA+ DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 102
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG VI RR P +AF++FDD RDA+DA+ DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 102
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG VI RR P +AF++FDD RDA+DA+ DG
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 61 -KNGWRVEL--------SHNSRGGGGGRGGGRG 84
+G+R+ + S+N RGG G GRG
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRG 102
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDGK 61
RVYVGNL V E+D+ED F +G IR V + RR P +AF++F+D RDA+D++ +G
Sbjct: 10 RVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPPFAFVEFEDRRDAEDSVHGRNGY 69
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRS 86
N G+++ + H RG G + G S
Sbjct: 70 NFDGYKLRVEH-PRGNGPSQRPAYGMS 95
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L +ERDLE FR +G +R V + GY F++FDD+RDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKN---GYGFVEFDDHRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRS 86
G RV + +RG GR RS
Sbjct: 61 KLLGERVTVER-ARGTPRGRDQWSSRS 86
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 103 RLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRNEGVVEFASYSDLKNAIEKLDDTE 162
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 163 LNGRRIRL 170
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER+++D F +G I + + RPPG+AF++F+D DA+DAI DG
Sbjct: 9 IYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFED-ADAEDAIYGRDGY 67
Query: 62 NG----WRVELSHNSRGG-------GGGRGGGRGRSGGSDLKCYECGEP 99
N RVEL+H RG G RG S SD + G P
Sbjct: 68 NFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLP 116
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
+RV++G+L +V E+DL+ F+ +G + + + G+ F++FDD+RDA DAI +L+G
Sbjct: 2 TTRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKN---GFGFVEFDDHRDADDAISDLNG 58
Query: 61 KNGW----RVELSHNSRGGGGGR 79
K VEL++ SR G GGR
Sbjct: 59 KELLGERVSVELAYGSRRGPGGR 81
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++ V NL S VS +DL+D R G + + P ++F +Y D ++AI +LD +
Sbjct: 114 QLIVENLSSHVSWQDLKDYMRQAGEVTYADAHKIRPNEGVVEFANYSDMKNAISKLDNTD 173
Query: 63 --GWRVEL 68
G R+ L
Sbjct: 174 LSGRRIRL 181
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1
[Nomascus leucogenys]
Length = 494
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 13/90 (14%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L +R ++RD+E FR +G + V + G+ F+DF D RDA DA+ +L+G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKN---GFGFVDFQDQRDADDAVHDLNG 57
Query: 61 KN--GWRVELS--------HNSRGGGGGRG 80
K+ G RV L + R GGG RG
Sbjct: 58 KDLCGERVILEFPRRKVGYNEERSGGGYRG 87
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDGK 61
R+ V NL +R S +D++D R G+ + A +R A + F + D +DA+ +L G+
Sbjct: 113 RLVVDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQALVCFSTHDDLRDAMNKLQGE 172
Query: 62 --NGWRVELSHNSR 73
NG +++ + +R
Sbjct: 173 ELNGRKLKCTDETR 186
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|336374485|gb|EGO02822.1| hypothetical protein SERLA73DRAFT_70307 [Serpula lacrymans var.
lacrymans S7.3]
Length = 520
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD-- 59
++VYVG L + DL F G I +V + GY F++FD A++++ + +
Sbjct: 143 NKVYVGGLPEHTRQEDLRSCFGKIGSIVNVELKV---GYGFVEFDTKDAAEESVAKYNEG 199
Query: 60 --GKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRS 117
N RVE+SH GGGR + G C++CG+ GH+AREC + +RR
Sbjct: 200 HFMGNKIRVEISH-----GGGR---TSKHSGDPGACFKCGQTGHWARECPNHTVAPQRRP 251
Query: 118 RSP 120
P
Sbjct: 252 AHP 254
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGR 83
G RV + +RG G GG R
Sbjct: 61 ELLGERV-VVEPARGTARGPGGRR 83
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + ER++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSH 70
+ RVEL+H
Sbjct: 69 DFDGYRLRVELAH 81
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L ERDLE FR +G R V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 57 TRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKN---GYGFVEFDDYRDADDAVYELNGK 113
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGS 89
G R+ + R G RG + R G S
Sbjct: 114 ELLGERITV---ERARGTPRGSDQWRYGDS 140
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F Y D ++AI +LD
Sbjct: 188 RLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTE 247
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 248 LNGRRIRL 255
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR S +DL+D R G + + I+F Y D + A+ +LDG
Sbjct: 105 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTE 164
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + G
Sbjct: 165 VNGRKIRLVEDKPG 178
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG+L SR ERD+E F+ +G IR + + G+ F++F+D+RDA DAI EL+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKN---GFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F Y D + A+ +LDG
Sbjct: 105 RIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTE 164
Query: 62 -NGWRVELSHN 71
NG R+ L+ +
Sbjct: 165 LNGRRIRLTED 175
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSH 70
K+ G RV + H
Sbjct: 58 KDLCGERVIVEH 69
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+Y+GN+ ERD+E F+ +G +R + + GY F++F+D+RDA DA+++LDGK
Sbjct: 7 RLYLGNVSDETRERDVEKFFKGYGKLREIALKN---GYGFVEFEDHRDADDAVQDLDGKD 63
Query: 62 -NGWRVELSHNSRGGGGGRGGGR 83
NG RV + +R RGG R
Sbjct: 64 MNGSRVRVEF-ARSPRDKRGGSR 85
>gi|225706140|gb|ACO08916.1| Splicing factor, arginine/serine-rich 4 [Osmerus mordax]
Length = 101
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHNS---RGGGGGRGG 81
K+ G RV + H R G G GG
Sbjct: 58 KDLCGERVIVEHTKGPRRDGSYGSGG 83
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + E ++ED F +G I + V RPP Y F++F+ RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NLDGCRLRVELAHGGRG 85
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+++G + DLED FR +G +IR + F++++D RDA++A+ K
Sbjct: 2 LFIGRVPEDARSSDLEDIFRKYGKIIRCDVKHGASVSFGFVEYEDKRDAEEAV-----KA 56
Query: 63 GWRVELSHNSR------GGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
G E N GGR GG RS G C++CGE GH+AREC GG G R
Sbjct: 57 GQETEFEFNGAKMYVEWAKAGGRRGGE-RSDG----CFKCGETGHWARECPNSGGGG--R 109
Query: 117 SRSPR 121
RSPR
Sbjct: 110 DRSPR 114
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSR+++G L V E D+E R +G IR + + R GY F++FDD+RDA+DA+ +L+G
Sbjct: 1 MSRIFLGRLPRDVRESDVEKFLRGYGKIRDISLKR---GYGFVEFDDHRDAEDAVHDLNG 57
Query: 61 KN--GWR--VELSHNSRGGGGGR 79
++ G R VE S R GGGR
Sbjct: 58 RDLIGERVVVEFSKGRRSEGGGR 80
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD 59
V V NL SR S +DL+D FR +G + ++ G ++F+ D AI +LD
Sbjct: 109 VIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLD 164
>gi|431913362|gb|ELK15038.1| Centrosomal protein of 192 kDa [Pteropus alecto]
Length = 2375
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
Query: 30 SVWVARRPPGYAFIDFDDYRDAQDAIRELDGK---NGW-RVELS 69
+VW+AR PPG+AF +F+D RD +DA+R LDGK W RVELS
Sbjct: 98 TVWIARNPPGFAFAEFEDPRDVEDAVRGLDGKVICGSWARVELS 141
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like
[Taeniopygia guttata]
Length = 277
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG+L SR ERD+E F+ +G IR + + G+ F++F+D+RDA DAI EL+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKN---GFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F Y D + A+ +LDG
Sbjct: 106 RIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTE 165
Query: 62 -NGWRVELS 69
NG R++L+
Sbjct: 166 LNGRRIKLT 174
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L ++ER LE+ F FG I V RP G+ FI F D R DAIR
Sbjct: 3 NRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDAIR 62
Query: 57 ELDGKN-GWRVELSHNSRGGGGGRGGGRGRSGGSDL----------------KCYECGEP 99
E+ G++ G RV + ++ GG G GG +C++CG
Sbjct: 63 EMHGRDFGDRVISVNKAQPKMGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQDECFKCGRS 122
Query: 100 GHFAREC 106
GH+AR+C
Sbjct: 123 GHWARDC 129
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + E ++ED F +G I + V RPP Y F++F+ RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NLDGCRLRVELAHGGRG 85
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 28/112 (25%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN-----------------------SRGGGGGRGGGRGRSG 87
K G RV + H S+ GG GR GGR R G
Sbjct: 58 KELCGERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGRWGGRDRYG 109
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2
[Takifugu rubripes]
Length = 374
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRARENDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHNS--RGGGGGRGGGRGRSGG 88
K G RV + H R GG G + R GG
Sbjct: 58 KELCGERVIVEHTKGPRRDGGYSGRSKPRPGG 89
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSG 87
G RV + RG RG SG
Sbjct: 61 ELLGERVVVEP-------ARGTARGPSG 81
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG+L SR ERD+E F+ +G IR + + G+ F++F+D+RDA DAI EL+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHLKN---GFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F Y D + A+ +LDG
Sbjct: 105 RIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTE 164
Query: 62 -NGWRVEL 68
NG R++L
Sbjct: 165 LNGRRIKL 172
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + E ++ED F +G I + V RPP Y F++F+ RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NFDGCRLRVELAHGGRG 85
>gi|393247796|gb|EJD55303.1| hypothetical protein AURDEDRAFT_109681 [Auricularia delicata
TFB-10046 SS5]
Length = 523
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 21/117 (17%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+GNL + E DL+ F G I S+ + GY F++F+ A++++ +
Sbjct: 90 NKVYIGNLPEQTRESDLQSCFGKIGRIASIELKF---GYGFVEFETQEAAEESVAKY--H 144
Query: 62 NGW------RVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGS 112
GW +VE+S GR G+G G+ C++CG+ GH+AREC GG+
Sbjct: 145 EGWFMGNKIKVEISR-------GRNKGKGDQPGA---CFKCGQMGHWARECPHGGGT 191
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSG 87
G RV + RG RG SG
Sbjct: 61 ELLGERVVVE-------PARGTARGPSG 81
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + E ++ED F +G I + V RPP Y F++F+ RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NLDGCRLRVELAHGGRG 85
>gi|25012246|gb|AAN71237.1| LD22171p, partial [Drosophila melanogaster]
Length = 187
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 1 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 57
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVW--VARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + E ++ED F +G I + V RPP Y F++F+ RDA+DAI+ DG
Sbjct: 9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68
Query: 62 NG----WRVELSHNSRG 74
N RVEL+H RG
Sbjct: 69 NLDGCRLRVELAHGGRG 85
>gi|428176969|gb|EKX45851.1| hypothetical protein GUITHDRAFT_108300 [Guillardia theta CCMP2712]
Length = 126
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK-- 61
V+VGNL RDL+D FR +G I WVAR+PPG+ F+ FDD RDA+DA ++LDG
Sbjct: 2 VFVGNLPPDAEGRDLQDFFRKYGQINDAWVARKPPGFGFVWFDDDRDARDACQDLDGTDL 61
Query: 62 --NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRSRS 119
N RVE+S R G G G + G+P F R R G+G RR ++
Sbjct: 62 MGNRVRVEISTGRRRDDRGYGLLLLVETGLAIAIAPPGDP-LFVRSVR---GAGVRRMKA 117
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSG 87
G RV + RG RG SG
Sbjct: 61 ELLGERVVVEP-------ARGTARGPSG 81
>gi|392597031|gb|EIW86353.1| hypothetical protein CONPUDRAFT_133797 [Coniophora puteana
RWD-64-598 SS2]
Length = 453
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VYVG L DL++ F G I ++ + G+ F++FD A++++ + +
Sbjct: 84 NKVYVGGLPEHTQTEDLQNCFGKLGSIVAIELKT---GFGFVEFDSREAAEESVAKYNEG 140
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGR 114
N RVELSH+ RG C++CG+PGH+AREC GS R
Sbjct: 141 YFMGNKIRVELSHS-------RGRITKHVSSDPSACFKCGQPGHWARECPNGDGSFR 190
>gi|242208424|ref|XP_002470063.1| predicted protein [Postia placenta Mad-698-R]
gi|220730963|gb|EED84813.1| predicted protein [Postia placenta Mad-698-R]
Length = 636
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L DLE F G I ++ + GY F++F+ A++++ +
Sbjct: 232 NKVYIGGLPEHTRREDLESCFGKIGSIVNIELKV---GYGFVEFETREAAEESVAKYHEG 288
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRS 117
N RVELSH GGGR + G C++CG+ GH+AREC + RR S
Sbjct: 289 YFMGNKIRVELSH-----GGGR---TAKYSGDPGACFKCGQLGHWARECPNHLSTSRRSS 340
Query: 118 RSP 120
P
Sbjct: 341 HHP 343
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSG 87
G RV + RG RG SG
Sbjct: 61 ELLGERVVVE-------PARGTARGPSG 81
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 NGWRVELSHNSRGGGGGRGGGRGRSG 87
EL RG RG SG
Sbjct: 61 -----ELLGERVVVEPARGTARGPSG 81
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWV---ARRPPGYAFIDFDDYRDAQDAIRELD 59
++YVGNL RD+E+ F +G I ++ + RR P +AF++F+D DA DA+R D
Sbjct: 11 KIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRD 70
Query: 60 GKN----GWRVELSHN-------SRGGGGGRGGGRGRSGGSDLKCYECGEP 99
G N RVEL +RGGGG G R SD + G P
Sbjct: 71 GYNFDGYALRVELPRTGVPERRFNRGGGGASGPSR----RSDFRVIVTGLP 117
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Metaseiulus occidentalis]
Length = 303
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+YVG L R ERDLE F +G IR + + G+AF++F+D RDA+DA EL+GK+
Sbjct: 8 RLYVGRLSHRTRERDLERLFSPYGRIREILL---KSGFAFVEFEDTRDAEDACYELNGKD 64
Query: 63 --GWRVELSHNSRGGGGGRGG 81
G R+ + ++G GRGG
Sbjct: 65 LLGDRI-VVEMAKGTERGRGG 84
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP-PGYAFIDFDDYRDAQDAIRELDGK 61
RV VGNL +RVS +DL+D R G A + A I+F D + AI++ DG
Sbjct: 108 RVIVGNLSTRVSWQDLKDMMRKVGCEVCYADAHKHRKNEAVIEFATRSDMKRAIQKYDGH 167
Query: 62 --NGWRVELSHN 71
NG ++E+ +
Sbjct: 168 EVNGRKMEVHED 179
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+++YVG + +DLED FR +G +R+V + R + F++F D RDA DA +LDG+
Sbjct: 90 TKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE---FGFVEFTDPRDADDARHDLDGR 146
Query: 62 ----NGWRVELSHNS-RGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRL 108
+ VE + + RG GG G+G S +CY CG GH+A E L
Sbjct: 147 IFDGSHLIVEFARGAQRGPGGVPLDGKGPSFPG--RCYNCGMDGHWAWEELL 196
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIRELDGK 61
+Y+G L + +ER L D F +G I V +R G YAFI++ + +DA DA++ L+G
Sbjct: 3 LYIGRLSTDTTERHLNDHFSKYGTITRNDV-KRSNGRCYAFIEYKEKKDADDALKALNGT 61
Query: 62 NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
++S GG + KC+ CG+ GH+ + C
Sbjct: 62 TLLNSKISVEWAKGG---------KNADNNKCFACGQEGHWIKNC 97
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 13/90 (14%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L +R ++RD+E FR +G + V + G+ F+DF + RDA DA+ +L+G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLSDVIMKN---GFGFVDFQEQRDADDAVHDLNG 57
Query: 61 KN--GWRVELS--------HNSRGGGGGRG 80
K+ G RV L + R GGG RG
Sbjct: 58 KDLCGERVILEFPRRKVGYNEERSGGGFRG 87
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding
protein srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L +R S+RD+E FR +G + V + G+ F+DF D RDA DA+ +L+G
Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKN---GFGFVDFQDQRDADDAVHDLNG 57
Query: 61 KN--GWRVELS--------HNSRGGGGGRG 80
K G RV L + R G G RG
Sbjct: 58 KELCGERVILEFPRRKVGYNEERSGSGFRG 87
>gi|242015115|ref|XP_002428219.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
gi|212512780|gb|EEB15481.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
Length = 221
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S VYV NL ++ DL F +G + V V R+ G AF+ F DAQ+ +
Sbjct: 12 STVYVSNLSFSLTNNDLHKVFSEYGKVVKVTVMKDRKTRKSKGVAFVLFLKKEDAQNCCK 71
Query: 57 ELDGKNGWRVELSHNSRGGGGGRGGG--RGRSGGSDLKCYECGEPGHFAREC 106
L+GK + L S GR R R KCYECGE GH + +C
Sbjct: 72 MLNGKEMFGRTLKA-SIASDNGRSAQFIRRRDYPDKSKCYECGEDGHLSYKC 122
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 16/94 (17%)
Query: 16 RDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN--GWRVELSHNSR 73
RDLED F +G + V R GY F++++D RDAQDA+R+LDG + G R+ +
Sbjct: 35 RDLEDLFYKYGKLTRCDVKR---GYGFVEYEDRRDAQDALRDLDGVSVLGTRIAIEW--- 88
Query: 74 GGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
+G R + C+ CGE GH+AR+C+
Sbjct: 89 ----AKGARRTDTD----TCFRCGEEGHWARDCK 114
>gi|388501618|gb|AFK38875.1| unknown [Medicago truncatula]
Length = 277
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S +YV NLD ++ DL F FG I V V R G AFI F DAQ A+
Sbjct: 68 STIYVSNLDYSLTNSDLHTLFSTFGRIARVTVLKDRHTRLSRGVAFIQFVSRHDAQIAVT 127
Query: 57 ELDGK--NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC--RLRGGS 112
E++ K NG + S S G + C+ECG GH + EC G
Sbjct: 128 EMNKKILNGRTLSASIASDNGRAPEFIKKRVYNTETGLCFECGGSGHLSYECPKNQLGAK 187
Query: 113 GRRRSRSPR 121
R + + PR
Sbjct: 188 ARPQPKKPR 196
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSRGGGGGRGGGRGRS 86
+G+R+ + RGGG G G R+
Sbjct: 68 DYDGYRLRVEF-PRGGGPGSYRGNNRN 93
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP--PGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL + +D+ED F +G IR + + R P +AF++F+D RDA+DA+ DG
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 61 --KNGWRVEL 68
+G+R+ +
Sbjct: 77 YDYDGYRLRV 86
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 67/152 (44%), Gaps = 39/152 (25%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+YVG L SR RDLE F +G +R V + +AF++F D RDA DA LDG+
Sbjct: 11 TRLYVGRLSSRTRSRDLERVFSRYGRVRGVDMKN---DFAFVEFSDPRDADDARYNLDGR 67
Query: 62 N--GWRVELSHNSRGGGGGRGG------GRGRSGGS---------------------DLK 92
+ G R+ + GG RG GRG GS K
Sbjct: 68 DVEGSRIIVEF---AKGGPRGSRDREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNK 124
Query: 93 CYECGEPGHFARECRLRGGS----GRRRSRSP 120
CY CGE GH + C+ GR SRSP
Sbjct: 125 CYRCGERGHIEKNCKNSPKKLSQRGRSLSRSP 156
>gi|402583204|gb|EJW77148.1| hypothetical protein WUBG_11940 [Wuchereria bancrofti]
Length = 146
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
R++V N+D V RDLE+ F FG + VWVA PP +AF+ F + DA +A+ L+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNT 105
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSRGGGGGRGGGRGRS 86
+G+R+ + RGGG G G R+
Sbjct: 68 DYDGYRLRVEF-PRGGGPGSYRGNNRN 93
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+Y+GNL S+R+LE+EF FG I + + G +AFI+F D RDA+DAIR+
Sbjct: 6 LSRIYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDK 65
Query: 59 DGK----NGWRVEL 68
DG RVEL
Sbjct: 66 DGYEFHGKKLRVEL 79
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSRGGGGGRGGGRGRS 86
+G+R+ + RGGG G G R+
Sbjct: 68 DYDGYRLRVEF-PRGGGPGSYRGNNRN 93
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+ R+YVGNL ++R++E+EF FG I + R G +AF++F DYRDA+DAI+
Sbjct: 6 VVRLYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARDAIKNK 65
Query: 59 DGK--NG--WRVELSHNSR 73
DG NG RVE+ +S+
Sbjct: 66 DGAEFNGKRLRVEVPFSSK 84
>gi|116284263|gb|AAI24193.1| Zgc:55809 protein [Danio rerio]
Length = 284
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYVGKLSHRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRV 66
K+ G RV
Sbjct: 58 KDLCGKRV 65
>gi|28571695|ref|NP_788670.1| B52, isoform F [Drosophila melanogaster]
gi|281361723|ref|NP_001163604.1| B52, isoform K [Drosophila melanogaster]
gi|23171196|gb|AAN13578.1| B52, isoform F [Drosophila melanogaster]
gi|272476966|gb|ACZ94901.1| B52, isoform K [Drosophila melanogaster]
Length = 147
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|403413643|emb|CCM00343.1| predicted protein [Fibroporia radiculosa]
Length = 559
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L + DLE F G I ++ + GY F++F+ A++++ +
Sbjct: 161 NKVYIGGLPEHTRKEDLESCFGKIGTIVNIELKV---GYGFVEFESREAAEESVAKYHEG 217
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRS 117
N RVELSH GGGR + G C++CG+ GH+AREC +G R
Sbjct: 218 YFMGNKIRVELSH-----GGGR---TAKYSGDPGACFKCGQVGHWARECPNHMPNGNHRR 269
Query: 118 RSP 120
P
Sbjct: 270 PHP 272
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVI--RSVWVAR---RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L ++ER LE+ F FG I V + R RP G+ FI F D R DAIR
Sbjct: 7 NRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRAMDDAIR 66
Query: 57 ELDGKN-GWRVELSHNSRGGGGGRGGGRGRSGGSDL----------------KCYECGEP 99
E+ G++ G RV + ++ GG G GG +C++CG
Sbjct: 67 EMHGRDFGDRVISVNKAQPKIGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQDECFKCGRS 126
Query: 100 GHFAREC 106
GH+AR+C
Sbjct: 127 GHWARDC 133
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+Y+GN+ ERD+E F+ +G +R V + GY F++F+D+RDA DA+++LDGK
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKN---GYGFVEFEDHRDADDAVQDLDGKD 63
Query: 62 -NGWRV 66
NG RV
Sbjct: 64 MNGSRV 69
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R++VG L+ E+D+E F+ +G IR + + R G+ F++FDD RDA+DA+ ELDGK
Sbjct: 5 RIFVGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+ V NL SRVS +DL+D R G + R ++F Y D ++A+ +L GK
Sbjct: 120 NRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGK 179
Query: 62 --NGWRVEL 68
NG +++L
Sbjct: 180 EINGRKIKL 188
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1
[Oryzias latipes]
Length = 372
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + R++ED F +G I + + RPPGYAF++F+D RDA DAI DG
Sbjct: 9 IYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 62 NG----WRVELSHNSRGG 75
+ RVE++H R G
Sbjct: 69 DFDGCRLRVEIAHGGRRG 86
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRV++G L + ERD+E F+ +G IR + + G+ F++FDD+RDA DA+ EL+GK
Sbjct: 21 SRVFIGRLSPQARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGK 77
Query: 62 N--GWRVELSH 70
RV + H
Sbjct: 78 ELLSERVTIEH 88
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F D ++AI +LDG
Sbjct: 128 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTE 187
Query: 62 -NGWRVEL 68
NG ++++
Sbjct: 188 LNGRKLKI 195
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SR+YVGNL + V +D+ED F +G + V + RR P +AF++F+D RDA+DA+R DG
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGKVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDYEGYRLRV 74
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans
morsitans]
Length = 236
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SR+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 7 SRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 61 --KNGWRVELSHNSRGGG 76
+G+R+ + RGGG
Sbjct: 67 YDYDGYRLRVEF-PRGGG 83
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSV--WVARRPPGYAFIDFDDYRDAQDAIRELD 59
S +YVGNL + E ++ED F +G I + + RPPGY FI+FD+ RDA+DAIR
Sbjct: 6 STIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIR--- 62
Query: 60 GKNGWRVE 67
G++G++ +
Sbjct: 63 GRDGYKFD 70
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 23/127 (18%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVI--RSVWVAR---RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L V+ER LE+ F FG I + + R RP G+ FI + D R +DAIR
Sbjct: 7 NRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITYADRRGMEDAIR 66
Query: 57 ELDGKN-GWRVELSHNSRGGGG----------------GRGGGRGRSGGSDLKCYECGEP 99
E+ G++ G R+ + ++ G G GG RS G D C++CG P
Sbjct: 67 EMHGRDFGDRIISVNKAQPKMGEDPDHGYNGGYSSGGRGSYGGGDRSAGQD-DCFKCGRP 125
Query: 100 GHFAREC 106
GH+AR+C
Sbjct: 126 GHWARDC 132
>gi|325192592|emb|CCA27020.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 347
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MS++YVGNL S ERDLE F FG I S V R GY F++F D A +A+RE+D
Sbjct: 1 MSKIYVGNLTSDFDERDLEAGFEKFGRIESCAVKR---GYGFVNFRDDHSAAEALREMDD 57
Query: 61 K--NGWRVELSHNSRGG 75
G R+ +++ + G
Sbjct: 58 TELKGRRIRVAYANSGS 74
>gi|323456543|gb|EGB12410.1| hypothetical protein AURANDRAFT_19981, partial [Aureococcus
anophagefferens]
Length = 94
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+VY+G S +E L F+ +G I +WVA+ PPG+AF+ F D RDA DA+ LDG
Sbjct: 8 KVYIGGCTS-ATEEALSATFQHYGTIDRLWVAKSPPGFAFVWFGDERDAADAVAGLDGTE 66
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRV++G L + ERD+E F+ +G IR + + G+ F++FDD+RDA DA+ EL+GK
Sbjct: 4 SRVFIGRLSPQARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGK 60
Query: 62 N--GWRVELSH 70
RV + H
Sbjct: 61 ELLSERVTIEH 71
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F D ++AI +LDG
Sbjct: 111 RLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRSDLKNAISKLDGTE 170
Query: 62 -NGWRVEL 68
NG ++++
Sbjct: 171 LNGRKLKI 178
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G L ERD+E F+ +G IR + + G+ F++FDDYRDA DA+ EL+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDYRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F + D ++AI +LDG
Sbjct: 114 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTD 173
Query: 62 -NGWRVEL 68
NG +++L
Sbjct: 174 LNGRKLKL 181
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV+VG+L SR ERD+E F+ +G IR + + G+ F++F+D+RDA DAI EL+GK
Sbjct: 5 RVFVGHLSSRARERDVEKFFKGYGRIREIHL---KNGFGFVEFEDHRDADDAIYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCDERVTIEH 71
>gi|393909592|gb|EFO27939.2| hypothetical protein LOAG_00532 [Loa loa]
Length = 173
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
R++V N+D V RDLE+ F FG + VWVA PP +AF+ F + DA +A+ L+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNT 105
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVY+G L + ERD+E FR FG +R V + G+ F++FDD RDA DA+ EL+GK
Sbjct: 3 TRVYIGRLSYQTRERDVERFFRGFGHLREVNLKN---GFGFVEFDDPRDADDAVYELNGK 59
Query: 62 N--GWRVELSH 70
+ G RV + H
Sbjct: 60 DLCGERVIIEH 70
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+ V NL SR S +DL+D R G + + ++F Y D ++A+ +LDG
Sbjct: 122 NRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHKNEGVVEFATYSDMKNAMSKLDGT 181
Query: 62 --NGWRVELSHN 71
NG +V L +
Sbjct: 182 EINGRKVRLVED 193
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+Y+GN+ ERD+E F+ +G +R V + GY F++F+D+RDA DA+++LDGK
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKN---GYGFVEFEDHRDADDAVQDLDGKD 63
Query: 62 -NGWRVELS 69
NG RV +
Sbjct: 64 MNGSRVRVE 72
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGR 85
G RV + G RG R R
Sbjct: 61 ELLGERVVVEP---ARGTARGSNRDR 83
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Amphimedon queenslandica]
Length = 309
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SR+Y+G L + E+D+E FR FG IR + + G+ F++FDDYRDA+DA+ EL G+
Sbjct: 5 SRIYIGRLPYQAREKDVERFFRGFGRIRDINLKN---GFGFVEFDDYRDAEDAVYELHGR 61
Query: 62 N--GWRVELSH 70
G RV + H
Sbjct: 62 ELLGERVIVEH 72
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V N+ SRVS +DL+D R G I ++ G +++ Y D ++AIR+L+G
Sbjct: 116 RILVENVSSRVSWQDLKDFMRTAGEITYADAHKQKTGEGIVEYATYEDMKNAIRKLNGTD 175
Query: 62 -NGWRVELSHNSRG 74
NG ++ L + RG
Sbjct: 176 LNGRKIRLIEDYRG 189
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFG-VIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
+++G LD RDLED F+ +G ++R + F++F+D RDA+DA+ +G+N
Sbjct: 3 LFIGRLDRDTRVRDLEDIFQPYGRLVRCDIKGGAVYSFGFVEFEDRRDAEDALNRENGRN 62
Query: 63 --GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
G R+ + G+ RS SD C+ C +PGH+A++C
Sbjct: 63 VRGVRIAVEW---------AKGQNRSADSD-SCFRCNKPGHWAKDC 98
>gi|312066123|ref|XP_003136120.1| hypothetical protein LOAG_00532 [Loa loa]
Length = 201
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
R++V N+D V RDLE+ F FG + VWVA PP +AF+ F + DA +A+ L+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNT 105
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|28571693|ref|NP_788669.1| B52, isoform D [Drosophila melanogaster]
gi|281361721|ref|NP_001163603.1| B52, isoform I [Drosophila melanogaster]
gi|195329208|ref|XP_002031303.1| GM24118 [Drosophila sechellia]
gi|195571105|ref|XP_002103544.1| GD18917 [Drosophila simulans]
gi|23171195|gb|AAN13577.1| B52, isoform D [Drosophila melanogaster]
gi|194120246|gb|EDW42289.1| GM24118 [Drosophila sechellia]
gi|194199471|gb|EDX13047.1| GD18917 [Drosophila simulans]
gi|272476965|gb|ACZ94900.1| B52, isoform I [Drosophila melanogaster]
Length = 135
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L +R ++RD+E FR +G + V + G+ F+DF D RDA DA+ +L+G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKN---GFGFVDFQDQRDADDAVHDLNG 57
Query: 61 KN--GWRVELS--------HNSRGGGGGRG 80
K+ G RV L + R G G RG
Sbjct: 58 KDLCGERVILEFPRRKVGYNEERSGSGYRG 87
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSRGGGGG 78
+G+R+ + RGGG G
Sbjct: 68 DYDGYRLRVEF-PRGGGPG 85
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARR--PPGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL + +D+ED F +G IR + + R P +AF++F+D RDA+DA+ DG
Sbjct: 24 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 83
Query: 61 KNG----WRVELSHNSRGGGGGRGGG 82
+ RVE + RG G G G
Sbjct: 84 YDYDGYRLRVEFPRSGRGTGSGPSSG 109
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDNRDADDAVKARDGY 68
Query: 61 -KNGWRVELSHNSRGGGGG 78
+G+R+ + RGGG G
Sbjct: 69 DYDGYRLRVEF-PRGGGPG 86
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+GK+
Sbjct: 1 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNGKD 57
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 58 LCGERVIVEH 67
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGTRERDLEKFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SRVS +DL+D R G + ++ ++F +D + AI +LD
Sbjct: 117 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQNRNEGVVEFATLKDMKTAIEKLDDTE 176
Query: 62 -NGWRVEL 68
NG R+ L
Sbjct: 177 LNGRRIRL 184
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RVYVG L ERDLE FR +G R V + GY F++FDDYRDA DA+ EL+GK
Sbjct: 57 TRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKN---GYGFVEFDDYRDADDAVYELNGK 113
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRARENDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 40 YAFIDFDDYRDAQDAIRELDGKN--GWRVELSHN 71
Y F++FDD RDA DA+ +L+GK G RV + H
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT 1242
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M RVY+G L + ERD+E F+ +G I V + GY F++FDD RDA DA+ EL+G
Sbjct: 1 MLRVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNG 57
Query: 61 KN--GWRVELSHNSRGGGGGRGGGRGRSG 87
K+ G RV + H +RG G GRSG
Sbjct: 58 KDLCGERVIVEH-ARGPRRDGSYGSGRSG 85
>gi|393911086|gb|EJD76160.1| hypothetical protein LOAG_16828 [Loa loa]
Length = 407
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L R ERD+E FR +G I + + GYAF++F D RDA+DA+ +L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR--RPPGYAFIDFDDYRDAQDAIRELDGK 61
VYVGNL + ER++ED F +G + S+ + RPP +AF++F D RDA+DA+R DG
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 62 ----NGWRVELSH 70
N RVEL+
Sbjct: 72 DFYGNRLRVELAK 84
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|194901400|ref|XP_001980240.1| GG19772 [Drosophila erecta]
gi|195500858|ref|XP_002097554.1| GE26284 [Drosophila yakuba]
gi|190651943|gb|EDV49198.1| GG19772 [Drosophila erecta]
gi|194183655|gb|EDW97266.1| GE26284 [Drosophila yakuba]
Length = 135
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|170578222|ref|XP_001894321.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158599142|gb|EDP36833.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 200
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
R++V N+D V RDLE+ F FG + VWVA PP +AF+ F + DA +A+ L+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNT 105
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1
[Oreochromis niloticus]
Length = 390
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++F+D RDA DA++ DG
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 61 -KNGWRVELSHNSRGGGGG 78
+G+R+ + RGGG G
Sbjct: 68 DYDGYRLRVEF-PRGGGPG 85
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3
[Oryzias latipes]
Length = 388
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|384489855|gb|EIE81077.1| hypothetical protein RO3G_05782 [Rhizopus delemar RA 99-880]
Length = 211
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKNG 63
++V + ++ RDLED F +G I V R G+ F++FDD RDA+DA++ G +
Sbjct: 3 LFVARIPRDMNNRDLEDAFSKYGKITRFEVKRE--GFGFVEFDDKRDAEDAMK---GIHE 57
Query: 64 WRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGE------PGHFARECRLRGGSGRRRS 117
EL GG R S+ +CY CG GH+AR+CR G RR
Sbjct: 58 TVAELVVEWAKNGGKR--------PSENECYHCGRSETYLLAGHYARDCR----EGGRRD 105
Query: 118 RSPR----YRRSPS 127
R R Y RSP
Sbjct: 106 RDQRSRGGYDRSPK 119
>gi|66809897|ref|XP_638672.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467278|gb|EAL65311.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 365
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MS++Y+G L+ E DL F FG I + + + G+ FI++ D A DAI
Sbjct: 1 MSKIYIGRLNHDAREDDLYGRFSKFGKIDRLELRK---GFCFIEYFDKASADDAINSEHK 57
Query: 61 KN----GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+N VELS++S+G R S KC+ C E GH+AR C
Sbjct: 58 QNFLGRNIIVELSNSSKGIK--------RPDSSSGKCFMCNEEGHWARSC 99
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARR-PPGYAFIDFDDYRDAQDAIRELDGK 61
RVYVGNL V RD+ED F +G I+++ + R P +AF++F+D RDA DA+ DG+
Sbjct: 13 RVYVGNLPQFVKNRDIEDLFDKYGPIKAIDIHNRFDPAFAFLEFEDPRDASDAVYGKDGE 72
Query: 62 ----NGWRVELSHNSRGG 75
RV+ NS G
Sbjct: 73 RFEGQRIRVQFPRNSAAG 90
>gi|449550622|gb|EMD41586.1| hypothetical protein CERSUDRAFT_61576 [Ceriporiopsis subvermispora
B]
Length = 508
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L + DLE F G I ++ + GY F++FD+ A++++ + +
Sbjct: 89 NKVYIGGLPEHTRKEDLESCFGKIGNIVNIELKV---GYGFVEFDNPEAAEESVAKYNEG 145
Query: 62 ----NGWRVELSHNSRGGGGGRGGGR-GRSGGSDLKCYECGEPGHFARECRLRGGSGRRR 116
N RVE S RGGGR + G C++CG+ GH+AREC +G
Sbjct: 146 YFMGNKIRVEPS---------RGGGRTAKYNGDPGACFKCGQMGHWARECPNHTTNGSVP 196
Query: 117 SRSPRYRRS 125
+R P + +
Sbjct: 197 NRRPSHHPT 205
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV--ARRPPGYAFIDFDDYRDAQDAIREL 58
M+RV+VGNL V ER+L D+F +G I SV + RPP +AF+ +++ +DA DA+R +
Sbjct: 1 MARVFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSM 60
Query: 59 D----GKNGWRVELS 69
+ G + RVE+S
Sbjct: 61 NNTTFGGSRIRVEMS 75
>gi|402581590|gb|EJW75538.1| splicing factor, partial [Wuchereria bancrofti]
Length = 212
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L R ERD+E FR +G I + + GYAF++F D RDA+DA+ +L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
Query: 62 N 62
+
Sbjct: 60 S 60
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Oreochromis niloticus]
Length = 293
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+++G L E+D+E F+ +G IR + + R G+ F++FDD RDA+DA+ ELDGK
Sbjct: 5 RIFIGRLSPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+ V NL SRVS +DL+D R G + R ++F + D ++A+ +L GK
Sbjct: 114 NRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALDKLSGK 173
Query: 62 --NGWRVEL 68
NG +++L
Sbjct: 174 EINGRKIKL 182
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L V ERDLE F+ +G R + + GY F++F+DYRDA DA+ EL+GK
Sbjct: 4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 60
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGR 85
G RV + G RG R R
Sbjct: 61 ELLGERVVVEP---ARGTARGSNRDR 83
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIREL 58
+SR+Y+GNL S+R+LE+EF FG I + + G +AFI+F D RDA+DAIR+
Sbjct: 6 ISRIYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDK 65
Query: 59 DGK----NGWRVEL 68
DG RVEL
Sbjct: 66 DGYEFHGKKLRVEL 79
>gi|357115606|ref|XP_003559579.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Brachypodium
distachyon]
Length = 160
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 59/123 (47%), Gaps = 23/123 (18%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAI- 55
S+++VG L +ER +E FR FG I V V R G+ F+ F D R A DAI
Sbjct: 7 SQIFVGGLSWCTTERTVEGAFRRFGKIVHVQVITERHTGRSRGFGFVIFSDPRAAIDAIM 66
Query: 56 ----RELDGKN---GWRVELSHNSRGG-----GGGRGGGRGRSGGSDLKCYECGEPGHFA 103
+ELDG W N+ GG G GR G G GG C+ CG PGH+A
Sbjct: 67 WMHNQELDGHTITVFWANPKVDNADGGRDGYCGSGRAAGFG--GGC---CFACGRPGHWA 121
Query: 104 REC 106
+C
Sbjct: 122 PDC 124
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2
[Oreochromis niloticus]
Length = 386
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G+L ERD+E F+ +G IR + + G+ F++FDD+RDA DA+ EL+GK
Sbjct: 5 RVFIGHLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F D + AI + DG
Sbjct: 114 RLIVENLSSRISWQDLKDMMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKSAISKFDGTE 173
Query: 62 -NGWRVELSHNSR 73
NG ++++ +SR
Sbjct: 174 LNGRKLKVFEDSR 186
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP-PGYAFIDFDDYRDAQDAIR---- 56
+R+YVGNL + RD+E F FG + +V + R P +AF++F+D RDA+DA+R
Sbjct: 10 ARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPPFAFVEFEDARDAEDAVRYKDG 69
Query: 57 -ELDGKNGWRVELS--------HNSRG-GGGGRGGGRGRSG-GSDLKCYECGEPG 100
ELDG RVE +N R GR G R + + +CY G P
Sbjct: 70 YELDGYK-LRVEFPRGSGVHPGYNQRNRMLAGRNGCRTNASRHTGFRCYISGLPA 123
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RVY+G L +V ERD+E F+ +G + + + GY F++F+DYRDA DA+ EL+GK+
Sbjct: 4 RVYIGRLSYQVRERDVERFFKGYGRVTDILLKN---GYGFVEFEDYRDADDAVYELNGKD 60
Query: 63 --GWRVELSH 70
G RV + H
Sbjct: 61 LMGDRVLVEH 70
>gi|358331940|dbj|GAA50688.1| serine/arginine-rich splicing factor 4 [Clonorchis sinensis]
Length = 207
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G+L +R SERD+E F+ +G +R V + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYIGHLPARCSERDIERFFKGYGRLRDVVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
+ G R+ + H
Sbjct: 58 RELRGERIIVEH 69
>gi|312077156|ref|XP_003141179.1| hypothetical protein LOAG_05594 [Loa loa]
Length = 214
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L R ERD+E FR +G I + + GYAF++F D RDA+DA+ +L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
Query: 62 N 62
+
Sbjct: 60 S 60
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Metaseiulus occidentalis]
Length = 217
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SRVYVGNL + +D+ED F +G I + + RR P +AF++F+D RDA+DA+ DG
Sbjct: 7 SRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPPFAFVEFEDPRDAEDAVSARDG 66
Query: 61 KN----GWRVELSH-NSRGGGGGRGGGRG 84
+ RVE NS GG GRG
Sbjct: 67 YDYDGYKLRVEFPRGNSARPRGGPSRGRG 95
>gi|225448910|ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Vitis vinifera]
gi|147789032|emb|CAN75783.1| hypothetical protein VITISV_022491 [Vitis vinifera]
Length = 250
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S VYV NLD ++ DL F FG + V + R G AF+ F +A A R
Sbjct: 51 STVYVSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAR 110
Query: 57 ELDGKNGWRVELSHNSRGGGGGRGGG--RGRSGGSDLKCYECGEPGHFARECRLRGGSGR 114
E++GK + L+ S GR R R +CYECGE GH + EC
Sbjct: 111 EMNGKVLNKRTLTA-SIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYEC-------P 162
Query: 115 RRSRSPRYRRSPSYGRR 131
R PR R P RR
Sbjct: 163 RNQLGPRERPVPKRSRR 179
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG- 60
R+YVGNL + +D++D F FG + V + RR P +AF++FDD RDA+DA+ DG
Sbjct: 21 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 80
Query: 61 -KNGWRVELSHNSRGGG 76
+G+R+ + RGGG
Sbjct: 81 DYDGYRLRVEF-PRGGG 96
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIREL 58
+YV NL RV++ +L F FG + + +R G+AF+ F+D RDA DA++EL
Sbjct: 76 LYVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDAVQEL 135
Query: 59 DGKN--GWRVELSHNSRGGGGGRGGGR 83
+GK+ G R+ + H R G + G+
Sbjct: 136 NGKDIQGRRMRVEHAKRKCGHPKTPGQ 162
>gi|197725795|gb|ACH73087.1| arginine/serine-rich 7 splicing factor [Epinephelus coioides]
Length = 200
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Query: 35 RRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHN-SRGGGGGRGGGRGRSGGS 89
R PPG+AF++++D RDA+DA++ +DGK + RVELS SR GR R
Sbjct: 1 RNPPGFAFVEYEDSRDAEDAVKGMDGKVLCGSRIRVELSTGLSRKTRYGRPS--RRHFDP 58
Query: 90 DLKCYECGEPGHFAREC 106
+ +CY+CG+ GH+A +C
Sbjct: 59 NDRCYQCGDKGHYAYDC 75
>gi|349806005|gb|AEQ18475.1| putative zinc finger cchc-type and rna binding motif 1
[Hymenochirus curtipes]
Length = 125
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-----RRPPGYAFIDFDDYRDAQDAIR 56
S VYV NL ++ DL F +G + V + R+ G AF+ F D AQ+ +R
Sbjct: 10 STVYVSNLSFSLTNNDLHRIFSKYGKVVKVTIVKDKDFRKSKGVAFVLFLDKESAQNCVR 69
Query: 57 ELDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
L+ K + + + G R R+ +CYECG+ GH + C
Sbjct: 70 ALNNKQKASIAIDN-----GRATEFIRRRNYTDKSRCYECGDTGHLSYAC 114
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVY+G L R ERD+ED F+ +G IR + + G+ F++FDD RDA DA+ L+G+
Sbjct: 90 SRVYIGRLPYRARERDVEDFFKGYGRIREILLKN---GFGFVEFDDPRDADDAVYHLNGR 146
Query: 62 N--GWRVELSHNSRGGGG 77
G R+ + R G
Sbjct: 147 ELCGERIIVEMTKRPPKG 164
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVY+GNL V ERD+E + G IR V + GY F++FDD RDA D + ++DGK
Sbjct: 5 SRVYIGNLPENVRERDVEKFLKDHGRIREVVIKS---GYGFVEFDDPRDADDVVNDMDGK 61
Query: 62 N 62
+
Sbjct: 62 D 62
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPP-----GYAFIDFDDYRDAQDAIREL 58
+YV NL +RV ++DL+D F FG + V P G+ F+ F+D RDA+DA++EL
Sbjct: 67 LYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVKEL 126
Query: 59 DGK--NGWRVELSHNSRGGGGGRGGGR 83
+ + G ++ + H R G + G+
Sbjct: 127 NNQEVQGRKMRVEHAKRKRGHEKTPGQ 153
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIRE 57
R ++G L S+R L D F +G + V + R G+ FI FD+ + +AI
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 58 LDGKN----GWRVELSHNSRGGGG-GRGGGRGRSGGSD------------LKCYECGEPG 100
++G + V+ + +GG G G RGR G D C++CG+PG
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGDCFKCGKPG 127
Query: 101 HFAREC---RLRGGSGRRRSRSPRY 122
HFAREC R G GR S+ RY
Sbjct: 128 HFARECPSESSRDGGGRFSSKDDRY 152
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SR+YVGNL + V +D+ED F +G + V + RR P +AF++F+D RDA+DA+R DG
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDYEGYRLRV 74
>gi|125977312|ref|XP_001352689.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
gi|54641438|gb|EAL30188.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
Length = 352
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++++VGNL + ++ + F+ +G + + R Y F+ D D QDAI+EL+G+
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVR---NYGFVHLDCVGDVQDAIKELNGR 142
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-RLRGGSG 113
+V++S + G G +CY CG GH+++EC RL G +G
Sbjct: 143 VVDGQPLKVQVSTSRVRPKPGMGDPE--------QCYRCGRSGHWSKECPRLYGSTG 191
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
SR+YVGNL + V +D+ED F +G + V + RR P +AF++F+D RDA+DA+R DG
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 61 KN--GWRVEL 68
+ G+R+ +
Sbjct: 65 YDYEGYRLRV 74
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-RPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL V E+++ED F +G I+ V + R P +AF++F+D+RDA+DA+R DG
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L+ V ERDLE FR +G I + + G+ F+D DYRDA+DA+R+L+GK
Sbjct: 3 TRVFVGRLNYDVRERDLERFFRGYGRIEDIVLKN---GFGFVDISDYRDAEDAVRDLNGK 59
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+++G L+ E+D+E F+ +G IR + + R G+ F++FDD RDA+DA+ ELDGK
Sbjct: 5 RIFIGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+ V NL SRVS +DL+D R G + R ++F + D ++A+ +L GK
Sbjct: 110 NRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPNLNEGVVEFASHSDLKNALEKLSGK 169
Query: 62 --NGWRVEL 68
NG +++L
Sbjct: 170 EINGRKIKL 178
>gi|328876774|gb|EGG25137.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 297
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP-PGYAFIDFDDYRDAQDAIRELDGKN 62
+Y+G L + + +DL D F +G I V + +AFI+F + RDA DA++ L N
Sbjct: 3 LYIGKLSNETNRKDLNDLFSKYGTITRNDVKQVGGKCFAFIEFKERRDADDAMKAL---N 59
Query: 63 GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRSRSP 120
W +G + KC+ C + GH+++EC +G R RSR+P
Sbjct: 60 EW-----------------AKGGKAVVNNKCFTCNQEGHWSKECPNKG--KRSRSRTP 98
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 18/110 (16%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP--PGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL + V E+DLED F +G IR + + R +AF+ F+D RDA+DAI G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71
Query: 61 KNGW-------RVEL--SHNSRGGG--GGRGGGRGRSGGSDLKCYECGEP 99
+NG+ RVE ++ SRGG GGR G R SD + G P
Sbjct: 72 RNGYDYGQCRLRVEFPRTYGSRGGWPRGGRNGPPTRR--SDFRVLVSGLP 119
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G+L ERD+E F+ +G IR + + G+ F++FDD+RDA DA+ EL+GK
Sbjct: 5 RVFIGHLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|17647581|ref|NP_523957.1| lark, isoform A [Drosophila melanogaster]
gi|24659966|ref|NP_729237.1| lark, isoform B [Drosophila melanogaster]
gi|24659971|ref|NP_729238.1| lark, isoform C [Drosophila melanogaster]
gi|24659976|ref|NP_729239.1| lark, isoform D [Drosophila melanogaster]
gi|24659981|ref|NP_729240.1| lark, isoform E [Drosophila melanogaster]
gi|62510825|sp|Q94901.1|LARK_DROME RecName: Full=RNA-binding protein lark
gi|1518654|gb|AAB07067.1| RNA-binding protein lark [Drosophila melanogaster]
gi|7295256|gb|AAF50578.1| lark, isoform A [Drosophila melanogaster]
gi|16769574|gb|AAL29006.1| LD40792p [Drosophila melanogaster]
gi|23094008|gb|AAN12053.1| lark, isoform B [Drosophila melanogaster]
gi|23094009|gb|AAN12054.1| lark, isoform C [Drosophila melanogaster]
gi|23094010|gb|AAN12055.1| lark, isoform D [Drosophila melanogaster]
gi|23094011|gb|AAN12056.1| lark, isoform E [Drosophila melanogaster]
gi|220946850|gb|ACL85968.1| lark-PA [synthetic construct]
gi|220956448|gb|ACL90767.1| lark-PA [synthetic construct]
Length = 352
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++++VGNL + ++ + F+ +G + + R Y F+ D D QDAI+EL+G+
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVR---NYGFVHLDCVGDVQDAIKELNGR 142
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-RLRGGSG 113
+V++S + G G +CY CG GH+++EC RL G +G
Sbjct: 143 VVDGQPLKVQVSTSRVRPKPGMGDPE--------QCYRCGRSGHWSKECPRLYGSAG 191
>gi|403362231|gb|EJY80837.1| hypothetical protein OXYTRI_21772 [Oxytricha trifallax]
Length = 236
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 25/125 (20%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN- 62
++VGN+ V + DL +EF G + +AFI++ + RD ++AI EL+ K+
Sbjct: 3 LFVGNIARNVRQEDLHEEFDKIGPCTINFKG----SFAFIEYKEERDGEEAINELNNKDF 58
Query: 63 -GWRVELSHNSRGGG-GGRGGGRGRS------------------GGSDLKCYECGEPGHF 102
G ++ + + R G + GG R G + CY CG+PGHF
Sbjct: 59 GGQKIGIEWSKRSGKFDSKSGGNSRGRSRRDDSRDRGRDGDRRVGTGNKDCYNCGKPGHF 118
Query: 103 ARECR 107
AR+CR
Sbjct: 119 ARDCR 123
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 18/110 (16%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP--PGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL + V E+DLED F +G IR + + R +AF+ F+D RDA+DAI G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 71
Query: 61 KNGW-------RVEL--SHNSRGGG--GGRGGGRGRSGGSDLKCYECGEP 99
+NG+ RVE ++ SRGG GGR G R SD + G P
Sbjct: 72 RNGYDYGQCRLRVEFPRTYGSRGGWPRGGRNGPPTRR--SDFRVLVSGLP 119
>gi|256087165|ref|XP_002579746.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360042833|emb|CCD78243.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 279
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
++Y+G L + + DL E G + VWVAR PPG+AF ++ DA+ A+R L+G N
Sbjct: 11 KLYIGGLVENILKDDLVRELSKCGELVDVWVARNPPGFAFAEYVRSSDAEKAVRSLNGVN 70
Query: 63 G----WRVELSHNSR 73
RVE +H R
Sbjct: 71 VCGSRIRVEFAHGGR 85
>gi|302695537|ref|XP_003037447.1| hypothetical protein SCHCODRAFT_104251 [Schizophyllum commune H4-8]
gi|300111144|gb|EFJ02545.1| hypothetical protein SCHCODRAFT_104251, partial [Schizophyllum
commune H4-8]
Length = 490
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD-- 59
++VY+G L DL++ F G I ++ + GY F++FD+ A +++ +
Sbjct: 77 NKVYIGGLPESTRTEDLKNCFGKLGAIVNIELKI---GYGFVEFDNPEAAIESVNKYHEG 133
Query: 60 --GKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGG--SGRR 115
N RVE+S +GG + R C+ CG PGH+AREC G GRR
Sbjct: 134 YFMGNKIRVEIS---------KGGSKSRHAMDPGSCFRCGVPGHWARECPTYPGPPPGRR 184
>gi|356536336|ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
Length = 279
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L V+ER LE F +G I + RP G+ FI F D R +DAI+
Sbjct: 7 NRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRGMEDAIK 66
Query: 57 ELDGKN-GWRVELSHNSRGGGGGRGGGR----------------GRSGGSDLKCYECGEP 99
E+ G+ G R+ + ++ GG + G G D C++CG P
Sbjct: 67 EMHGREIGDRIISVNKAQPKMGGDDADQGYRGGYSSGGRGSYGAGDRVGQD-DCFKCGRP 125
Query: 100 GHFARECRL 108
GH+AR+C L
Sbjct: 126 GHWARDCPL 134
>gi|38649360|gb|AAH63235.1| Sfrs5a protein [Danio rerio]
Length = 182
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G L ERD+E F+ +G IR + + G+ F++FDDYRDA DA+ EL+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDYRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDGK 61
R+YVGNL + +D+ED F +G IR + + +R P +AF++FDD RDA+DA+R DG
Sbjct: 9 RIYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPPFAFVEFDDKRDAEDAVRGRDGY 68
Query: 62 N--GWRV 66
N G+R+
Sbjct: 69 NYDGYRL 75
>gi|339245697|ref|XP_003374482.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972269|gb|EFV55952.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 214
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
V++G++D +++ DLED F FG I +W+A P YAFI + DA++A+ L+G
Sbjct: 76 VHIGDIDDTITKADLEDAFSKFGKISEIWLATYAPFYAFIVYKTREDAEEAVHRLNG 132
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPG--YAFIDFDDYRDAQDAIRELDGK 61
+Y+G L ++++L D F +G I V ++ G YAF+++ + RDA DA++ L+G
Sbjct: 3 LYIGRLSVETTQKNLNDHFSKYGTITRNDV-KKTNGRCYAFVEYKERRDADDALKALNGT 61
Query: 62 NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
++S GG + KC+ CG+ GH+ + C
Sbjct: 62 TLLNSKISVEWAKGG---------KNADNNKCFACGQEGHWIKSC 97
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S +YV NLD ++ D+ F FG + V V R+ G AF+ + DA A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 57 ELDGK--NGWRVELSHNSRGGGGGRGGG--RGRSGGSDLKCYECGEPGHFAREC 106
+D K NG ++ +S GR + R +CYECG+ GH + EC
Sbjct: 117 SMDAKILNGRKLTVS---IAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYEC 167
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-ARRPPGYAFIDFDDYRDAQDAIRELDGK 61
RVYVGNL + RD+ED F FG I V + RR P + F++F+D RDA DA+ E DG
Sbjct: 8 RVYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPPFCFVEFEDPRDASDAVHERDGY 67
Query: 62 N 62
N
Sbjct: 68 N 68
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+RV+VG L+ V ERDLE FR +G I + + G+ F+D DYRDA+DA+R+L+GK
Sbjct: 3 TRVFVGRLNYDVRERDLERFFRGYGRIEDIVLKN---GFGFVDISDYRDAEDAVRDLNGK 59
>gi|255645278|gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 39/137 (28%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L V+ER LE F +G I + RP G+ FI F D R +DAI+
Sbjct: 7 NRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRGMEDAIK 66
Query: 57 ELDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLK------------------------ 92
E+ G+ +S N + + GG D+
Sbjct: 67 EMHGREIGDRIISVNK---------AQPKMGGDDVDQGYRGGYSSGGRGSYGAGDRVGQD 117
Query: 93 -CYECGEPGHFARECRL 108
C++CG PGH+AR+C L
Sbjct: 118 DCFKCGRPGHWARDCPL 134
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-RPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL V E+++ED F +G I+ V + R P +AF++F+D+RDA+DA+R DG
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>gi|356575516|ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
Length = 279
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 39/137 (28%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIR 56
+R++VG L V+ER LE F +G I + RP G+ FI F D R +DAI+
Sbjct: 7 NRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRGMEDAIK 66
Query: 57 ELDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLK------------------------ 92
E+ G+ +S N + + GG D+
Sbjct: 67 EMHGREIGDRIISVNK---------AQPKMGGDDVDQGYRGGYSSGGRGSYGAGDRVGQD 117
Query: 93 -CYECGEPGHFARECRL 108
C++CG PGH+AR+C L
Sbjct: 118 DCFKCGRPGHWARDCPL 134
>gi|170596998|ref|XP_001902973.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
gi|158589007|gb|EDP28178.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
Length = 128
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVYVG L R ERD+E FR +G I + + GYAF++F D RDA+DA+ +L+G+
Sbjct: 3 SRVYVGRLSYRAHERDIERFFRGYGRITEILL---KNGYAFVEFSDRRDAEDAVHDLNGR 59
Query: 62 N 62
+
Sbjct: 60 S 60
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1
[Takifugu rubripes]
Length = 374
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRARENDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KN--GWRVELSHN 71
K G RV + H
Sbjct: 58 KELCGERVIVEHT 70
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4
[Oryzias latipes]
Length = 344
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 14/87 (16%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVY+G L R E+D+E F+ +G I V + GY F++FDD RDA DA+ +L+G
Sbjct: 1 MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKN---GYGFVEFDDPRDADDAVYDLNG 57
Query: 61 KNGWRVELSHNSRGGGGGRGGGRGRSG 87
K EL G GR GGR R G
Sbjct: 58 K-----ELC------GYGRWGGRDRYG 73
>gi|145539490|ref|XP_001455435.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423243|emb|CAK88038.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 1 MSR-VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD 59
MSR +YVG L + S DL+ EF+ +G I+ + + +AFI+F+ DA+ AI ++D
Sbjct: 1 MSRQIYVGRLGQKTSREDLQKEFQRYGKIKDIDLR---STHAFIEFEGRDDAKKAISQMD 57
Query: 60 GKN--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
GK G R+ + G G D+ C+ CG GH+A +C+
Sbjct: 58 GKRIGGDRITVKSRDNRHLGANG-----PTARDV-CFNCGRKGHWANDCK 101
>gi|145512962|ref|XP_001442392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409745|emb|CAK74995.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 1 MSR-VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELD 59
MSR +YVG L S++ DL+ EF +G I+ + + +AFI+F+ +A+ AI ++D
Sbjct: 1 MSRQIYVGRLGSKIRREDLQQEFEKYGKIKDIDLR---STHAFIEFEASDEAKQAISQVD 57
Query: 60 GKN--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECR 107
G+ G RV + G RG D+ C+ CG GH+A EC+
Sbjct: 58 GRRIGGDRVTVKQRDDRPSGVRG-----PTTRDV-CFNCGRKGHWANECK 101
>gi|156406725|ref|XP_001641195.1| predicted protein [Nematostella vectensis]
gi|156228333|gb|EDO49132.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++++VG L RDLE+ F ++G + + Y FI+++D RDA++A+R + +
Sbjct: 6 TQLFVGRLSKETKLRDLENVFYLYGKLLRCDLK---TAYGFIEYEDPRDAEEAMRRENNR 62
Query: 62 N--GWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRG 110
G R+ + + G G GG+ R +C+ CG+ GH+A C RG
Sbjct: 63 KLFGSRIVVEYVRSGERGKPVGGQTRPTVVGDECFVCGKLGHWASSCPSRG 113
>gi|225708540|gb|ACO10116.1| Splicing factor, arginine/serine-rich 5 [Osmerus mordax]
Length = 135
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+++G L+ E+D+E F+ FG IR + + R G+ F++FDD RDA+DA+ ELDGK
Sbjct: 5 RIFIGRLNPSAREKDVERFFKGFGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG- 60
SRV++GNL V ERD+E F +G + ++++ + Y F +FDDYRDA DA+ +L+G
Sbjct: 7 SRVFLGNLPYSVRERDIERFFERYGRVYNIFI--KSGKYGFCEFDDYRDADDAVYKLNGG 64
Query: 61 -KNGWRVELSH 70
NG R+ + H
Sbjct: 65 ELNGERITVEH 75
>gi|426198327|gb|EKV48253.1| hypothetical protein AGABI2DRAFT_191883 [Agaricus bisporus var.
bisporus H97]
Length = 426
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L E DL + F G I ++ + GY F++FD A++++ + +
Sbjct: 73 NKVYIGGLPEHTREADLHNCFGKIGGIANIELKV---GYGFVEFDTREAAEESVAKYNEG 129
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRS 117
N +VE+SH GGGR + G C+ CG+ GH+AREC G +R
Sbjct: 130 HFMGNKIKVEISH-----GGGR---TAKFAGDPGACFRCGQMGHWARECPSNNGLPYQR- 180
Query: 118 RSPRY 122
R P++
Sbjct: 181 RPPQH 185
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAIR 56
S +YV NLD ++ D+ F FG + V V R+ G AF+ + DA A R
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAAR 116
Query: 57 ELDGK--NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+D K NG ++ +S + G + R +CYECG+ GH + EC
Sbjct: 117 SMDAKILNGRKLTVSIAADNGLASEFIKK-RVYKDKSRCYECGDEGHLSYEC 167
>gi|170046272|ref|XP_001850696.1| RNA binding motif protein 4,lark [Culex quinquefasciatus]
gi|167869088|gb|EDS32471.1| RNA binding motif protein 4,lark [Culex quinquefasciatus]
Length = 332
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++++VGNL + + F+ +G + + R Y F+ D D +AIREL+G
Sbjct: 86 TKIFVGNLTDVTRAPQVRELFQKYGTVVECDIVR---NYGFVHLDPQGDVNEAIRELNGM 142
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC-RLRGGSGRRR 116
+V++S + G G +CY CG GH+++EC RL R R
Sbjct: 143 MVDGQPMKVQVSTSRVRPKPGMGDPE--------QCYRCGRSGHWSKECPRLLFSESRFR 194
Query: 117 SRSPRYRR 124
R P Y R
Sbjct: 195 DRPPMYAR 202
>gi|268531628|ref|XP_002630941.1| C. briggsae CBR-RSP-5 protein [Caenorhabditis briggsae]
Length = 213
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
M R+Y+G + ERD+E + +G I ++ + G+AF+DF+DYRDA+DA +LDG
Sbjct: 1 MPRIYLGKIPYHARERDIERFLKGYGRITNISMKY---GFAFVDFEDYRDAEDACHDLDG 57
Query: 61 KNG------WRVELSHNSRGGGGGRGG 81
K VE++ G RGG
Sbjct: 58 KTMDGSSMRVVVEMAKGKPRGSDARGG 84
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G L ERD+E F+ +G IR V + G+ F++FDD RDA DA+ EL+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREVNLKN---GFGFVEFDDPRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F + D ++A+ +LDG
Sbjct: 125 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNALDKLDGTD 184
Query: 62 -NGWRVELSHN 71
NG +++LS +
Sbjct: 185 LNGRKLKLSED 195
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVY+G L R E D+E FR +G I + + G+ F+ FDD RDA DAI +L+GK
Sbjct: 5 SRVYIGRLSHRARENDVEHFFRGYGKINDLMLKN---GFGFVIFDDERDADDAIHDLNGK 61
Query: 62 N--GWRVEL 68
+ G RV L
Sbjct: 62 SLCGERVML 70
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 4 VYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP--PGYAFIDFDDYRDAQDAIRELDGK 61
+YVGNL + V E+DLED F +G IR + + R +AF+ F+D RDA+DAI G+
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---GR 191
Query: 62 NGW-------RVEL--SHNSRGGG--GGRGGGRGRSGGSDLKCYECGEP 99
NG+ RVE ++ SRGG GGR G R SD + G P
Sbjct: 192 NGYDYGQCRLRVEFPRTYGSRGGWPRGGRNGPPTRR--SDFRVLVSGLP 238
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-RPPGYAFIDFDDYRDAQDAIRELDG 60
+VYVGNL V E+++ED F +G I+ + + R P +AF++F+D+RDA+DA+R DG
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDG 68
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+++G L E+D+E F+ +G IR + + + G+ F++FDD RDA+DA+ ELDGK
Sbjct: 5 RIFIGRLSPTAREKDVERFFKGYGRIRDIDLKK---GFGFVEFDDPRDAEDAVYELDGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCNERVTIEH 71
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
+R+ V NL SRVS +DL+D R G + R ++F Y D ++A+ +L GK
Sbjct: 112 NRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGK 171
Query: 62 --NGWRVEL 68
NG +++L
Sbjct: 172 EMNGRKIKL 180
>gi|402220870|gb|EJU00940.1| hypothetical protein DACRYDRAFT_108285 [Dacryopinax sp. DJM-731
SS1]
Length = 491
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L + DL++ F G + ++ + GY F++FD+ + A++A+ + +
Sbjct: 68 NKVYIGGLPETTRDEDLQNCFGKLGNVVNIELKL---GYGFVEFDNVKAAEEAVAKYNEG 124
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+ +VE SH GGGR G+ C++CG+ GH+AREC
Sbjct: 125 YFMGSKIKVEQSH-----GGGRTSKYSNDPGA---CFKCGQHGHWAREC 165
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRVY+G L R E D+E FR +G I + + G+ F+ FDD RDA DAI +L+GK
Sbjct: 5 SRVYIGRLSHRARENDVEHFFRGYGKINDLMLKN---GFGFVIFDDERDADDAIHDLNGK 61
Query: 62 N--GWRVEL 68
+ G RV L
Sbjct: 62 SLCGERVML 70
>gi|409079907|gb|EKM80268.1| hypothetical protein AGABI1DRAFT_113469 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++VY+G L E DL + F G I ++ + GY F++FD A++++ + +
Sbjct: 70 NKVYIGGLPEHTREADLHNCFGKIGGIANIELKV---GYGFVEFDTREAAEESVAKYNEG 126
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGGSGRRRS 117
N +VE+SH GGGR + G C+ CG+ GH+AREC G +R
Sbjct: 127 HFMGNKIKVEISH-----GGGR---TAKFAGDPGACFRCGQMGHWARECPSNNGLPYQR- 177
Query: 118 RSPRY 122
R P++
Sbjct: 178 RPPQH 182
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
RV++G L ERD+E F+ +G IR V + G+ F++FDD+RDA DA+ EL+GK
Sbjct: 5 RVFIGRLSPHARERDVEKFFKGYGRIREVNLKN---GFGFVEFDDHRDADDAVYELNGKE 61
Query: 63 --GWRVELSH 70
RV + H
Sbjct: 62 LCSERVTIEH 71
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK- 61
R+ V NL SR+S +DL+D R G + V R ++F + D ++AI +LDG
Sbjct: 129 RIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNAIDKLDGTD 188
Query: 62 -NGWRVELSHN 71
NG +++LS +
Sbjct: 189 LNGRKLKLSED 199
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV-----ARRPPGYAFIDFDDYRDAQDAI- 55
SR++VG L ER LE+ FR FG + + R G+ F+ F D R + AI
Sbjct: 7 SRIFVGGLSFHTDERKLEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDPRAVESAIS 66
Query: 56 ----RELDGKNGW--RVELSHNSR----GGGGGRGGGRG------RSGGSDLKCYECGEP 99
+ELDG+ R E N+ GG RG RG G CY+CG
Sbjct: 67 EMHTKELDGRTISVNRAEPKMNTDDTRYSSGGDRGADRGDYRGGKGDGPPPGNCYQCGRA 126
Query: 100 GHFAREC 106
GH+AR+C
Sbjct: 127 GHWARDC 133
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 371
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS +DL+D R G + + ++F Y D ++AI + DG
Sbjct: 109 RVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 166
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 370
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS +DL+D R G + + ++F Y D ++AI + DG
Sbjct: 108 RVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 165
>gi|291231293|ref|XP_002735599.1| PREDICTED: RNA binding motif protein 4B-like isoform 2
[Saccoglossus kowalevskii]
Length = 237
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
++V+VGNL V RDL D F +G + V + Y F+ D +A++A+ L+ K
Sbjct: 9 TKVFVGNLSKSVQSRDLRDLFEKYGKVLECDVIK---NYGFVHMDKEDEAKEALDALNSK 65
Query: 62 ----NGWRVELSHNSRGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 106
+VELS + G GS +C++CG GH++R+C
Sbjct: 66 EFMGTNIKVELSTSRVHKTPG--------MGSKGECFKCGRQGHWSRDC 106
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS +DL+D R G + + ++F Y D ++AI + DG
Sbjct: 112 RVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 169
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS +DL+D R G + + ++F Y D ++AI + DG
Sbjct: 111 RVIVENLSSRVSWQDLKDLTRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 168
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVA-RRPPGYAFIDFDDYRDAQDAIRELDG 60
+R+YVGNL + +D+ED F FG I + + RR P +AF++F+D RDA+DA+ DG
Sbjct: 9 ARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPPFAFVEFEDPRDAEDAVHARDG 68
Query: 61 --KNGWRVEL 68
+G+R+ +
Sbjct: 69 YDYDGYRLRV 78
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS +DL+D R G + + ++F Y D ++AI + DG
Sbjct: 112 RVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 169
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS ++L+D R G + + ++F Y D ++AI + DG
Sbjct: 112 RVIVENLSSRVSWQELKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 169
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 1 MSRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
MSRVYVG + R +ERD+E F+ +G +R + + GY F++FD+ +DA DA+ +L G
Sbjct: 1 MSRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKN---GYGFVEFDNEKDADDAVYDLHG 57
Query: 61 KN--GWRVELSH 70
++ G R+ + H
Sbjct: 58 RDLRGERLIVEH 69
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 60
RV V NL SRVS +DL+D R G + + ++F Y D ++AI + DG
Sbjct: 112 RVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDG 169
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 36/137 (26%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIRE 57
R +VGNL ++ L+D F +G + V R G+AF+ FD+ + ++AI +
Sbjct: 8 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 67
Query: 58 LDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLK------------------------- 92
+ NG +E + +G GR R+G D
Sbjct: 68 M---NGLDLEGRAITVDKAQPQGVGRDRNGDRDFDRDRGSRGDRGRDYGGGRAPRGGSGG 124
Query: 93 ---CYECGEPGHFAREC 106
C++CG+PGHFAREC
Sbjct: 125 GGDCFKCGKPGHFAREC 141
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 36/137 (26%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVAR-----RPPGYAFIDFDDYRDAQDAIRE 57
R +VGNL ++ L+D F +G + V R G+AF+ FD+ + ++AI +
Sbjct: 44 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 103
Query: 58 LDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDLK------------------------- 92
+ NG +E + +G GR R+G D
Sbjct: 104 M---NGLDLEGRAITVDKAQPQGVGRDRNGDRDFDRDRGSRGDRGRDYGGGRAPRGGSGG 160
Query: 93 ---CYECGEPGHFAREC 106
C++CG+PGHFAREC
Sbjct: 161 GGDCFKCGKPGHFAREC 177
>gi|405974855|gb|EKC39468.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Crassostrea gigas]
Length = 219
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWV----ARRPPGYAFIDFDDYRDAQDAIRE 57
S VYVGNL ++ D+ F +G + V V ARR G AFI F + A A+R
Sbjct: 10 STVYVGNLPFSLTNNDIHKIFEKYGRVAKVTVLKDDARRSKGVAFIMFIEKESAIKAVRA 69
Query: 58 LDGKNGWRVELSHNSRGGGGGRGGGRGRSGGSDL-KCYECGEPGHFAREC 106
L+ + + N G R D KCYECG+ GH + +C
Sbjct: 70 LNKTEMFGRTIKCNIAKDNGRTTEFIKRKNYPDKSKCYECGDEGHLSYKC 119
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK 61
SRV++G L ERD+E F+ +G IR + + G+ F++FDD+RDA DA+ EL+GK
Sbjct: 4 SRVFIGRLSPHARERDVEKFFKGYGRIREINLKN---GFGFVEFDDHRDADDAVYELNGK 60
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN 62
R+ V NL SRVS +DL+D R G + V R ++F Y D + A+ +LDG
Sbjct: 115 RIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYSDMKSALDKLDG-- 172
Query: 63 GWRVELS 69
VELS
Sbjct: 173 ---VELS 176
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP--PGYAFIDFDDYRDAQDAIRELDG 60
R+YVGNL S V ERDLED F +G IR + + R +AF+ F+D RDA+DAI G
Sbjct: 16 RIYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIY---G 72
Query: 61 KNGW-------RVELSHNSRGGGGGRGGGR 83
+NG+ RVE G GG G R
Sbjct: 73 RNGYDYGQCRLRVEFPRTYGGRGGWPRGAR 102
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRP---PGYAFIDFDDYRDAQDAIRELD 59
RVYVGNL V E+DL D F +G I V + R P +AF++F+D RDA+DA++ D
Sbjct: 10 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 69
Query: 60 GK--NGWRVELSHNSRGGGG 77
G +G+R+ + RGG G
Sbjct: 70 GHEFDGYRIRVEF-PRGGSG 88
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.143 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,562,673,869
Number of Sequences: 23463169
Number of extensions: 127533952
Number of successful extensions: 1350797
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3265
Number of HSP's successfully gapped in prelim test: 13288
Number of HSP's that attempted gapping in prelim test: 1273516
Number of HSP's gapped (non-prelim): 58945
length of query: 131
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 34
effective length of database: 10,083,267,974
effective search space: 342831111116
effective search space used: 342831111116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)