Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>046601
MGIFDRSLTVSVGSTLGSLSCCRSLQKTRLNLIQFWLFISSSFLLQTDESGKFLVGSNPV
LSKDLLSHERNSLPSLNGRSDLLKLEHALIAENLWSFLEKLGACYSVIPCHIYRIWHDEV
SCFVPFLHVTKSKPLEVRSPLGIHVLMTNGILTAGVLKLCYQIKATMEHTLIPAVDALNR
KDVEGATNLLRRALQVLLARAVNIVILASNDILDLLPPDDPLFNKCIDPMDAL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046601
        (233 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037743 - symbol:AT1G15410 species:3702 "Arabi...   190  6.1e-17   2


>TAIR|locus:2037743 [details] [associations]
            symbol:AT1G15410 species:3702 "Arabidopsis thaliana"
            [GO:0006520 "cellular amino acid metabolic process" evidence=IEA]
            [GO:0008152 "metabolic process" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0016855 "racemase and epimerase
            activity, acting on amino acids and derivatives" evidence=IEA;ISS]
            InterPro:IPR015942 InterPro:IPR001920 Pfam:PF01177 EMBL:CP002684
            GO:GO:0009507 EMBL:AC007591 GO:GO:0006807 GO:GO:0036361
            Gene3D:3.40.50.1860 SUPFAM:SSF53681 UniGene:At.41934
            UniGene:At.71257 EMBL:BT002350 IPI:IPI00546030 RefSeq:NP_172993.1
            ProteinModelPortal:Q9XI28 SMR:Q9XI28 PRIDE:Q9XI28
            EnsemblPlants:AT1G15410.1 GeneID:838111 KEGG:ath:AT1G15410
            TAIR:At1g15410 InParanoid:Q9XI28 OMA:IIIPCNT PhylomeDB:Q9XI28
            ProtClustDB:CLSN2679471 ArrayExpress:Q9XI28 Genevestigator:Q9XI28
            Uniprot:Q9XI28
        Length = 330

 Score = 190 (71.9 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 47/118 (39%), Positives = 69/118 (58%)

Query:    53 FLVGSNPVLSKDLLSHERNSLPSLNGRSDLLKLEHALIAENLWS---FLEKLGACYSVIP 109
             F++ S+P L+K+LL +E NS PSL  R +   ++  LI ENL +   +LE+ GA   ++P
Sbjct:   113 FVLCSDPALNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMP 172

Query:   110 CHIYRIWHDEV--SCFVPFLHV----------TKSKPLEVRSPLGIHVLMTNGILTAG 155
             CHI  IW++EV     VP LH+           K KPLE  +PL + V+ T+  L+AG
Sbjct:   173 CHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAG 230

 Score = 185 (70.2 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
 Identities = 44/121 (36%), Positives = 62/121 (51%)

Query:   122 CFVPFLHVTKSKPLEVRSPLGIHVLMTNGILTAGVLKLCYQI---------KATMEHTLI 172
             C    L   K KPLE  +PL + V+ T+  L+AG  +   Q          KATMEHT+I
Sbjct:   197 CIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVI 256

Query:   173 PAVDALNRKDVEGATNXXXXXXXXXXXXXXNIVILASNDIXXXXXXXXXXFNKCIDPMDA 232
             P+++A+ RKD+EGA N              N+V+L S+++            KC+DPMDA
Sbjct:   257 PSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDA 316

Query:   233 L 233
             L
Sbjct:   317 L 317

 Score = 44 (20.5 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
 Identities = 22/64 (34%), Positives = 25/64 (39%)

Query:    21 CCRSLQKTRLNLIQFWLFISSSFLLQTDESGKFLVGSNPVLSKDLLSHERNSLPSLNGRS 80
             C  S    R+ L +      SS LL  DES        P     L    RNSL SL   S
Sbjct:    17 CYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDL---PKPKKGFCLSEDSRNSLNSLPADS 73

Query:    81 DLLK 84
              LL+
Sbjct:    74 -LLR 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      233       209   0.00079  112 3  11 22  0.45    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  172 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.67u 0.12s 17.79t   Elapsed:  00:00:01
  Total cpu time:  17.67u 0.12s 17.79t   Elapsed:  00:00:01
  Start:  Thu May  9 14:15:50 2013   End:  Thu May  9 14:15:51 2013

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