BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046604
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 21/131 (16%)
Query: 14 FKVEEQGCSRLCSHSSTSDGTSEDMVVLQLP----------YIIKFCKAHGVSKEN---- 59
F+VEE +L +D VV ++P ++++CK H V +E+
Sbjct: 16 FEVEEAVARKL---KIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVVDEESDEFK 72
Query: 60 ----EFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNF 115
EF K + ++LL A+YL IK LD A+T+A+RIK+K+ E IR+ F IEN+F
Sbjct: 73 TWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDF 132
Query: 116 MPEEKEATRKE 126
PEE+ A RKE
Sbjct: 133 TPEEEAAVRKE 143
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 12 QLFKVEEQGC--SRLCSHSSTSDGTSEDMVVLQ-----LPYIIKFCKAHGVSKENEFGKG 64
Q F+VEE S+ +H D ++ + + L +I++CK H V + N +
Sbjct: 14 QSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANPISEE 73
Query: 65 KSND-----------ELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIEN 113
N+ + E++L A+YL IK LD +T+A+ IK K+ E IR F IEN
Sbjct: 74 DLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIEN 133
Query: 114 NFMPEEKEATRKE 126
+F PEE+EA RKE
Sbjct: 134 DFTPEEEEAVRKE 146
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 5 IFEDGGQQLFKVEEQG---CSRLCSHSSTSDGTSEDMVVLQ-----LPYIIKFCKAHGVS 56
I + F+VEE+ C + +H S D T + + + L +I++C H V
Sbjct: 7 ILKSSDGHSFEVEEEAACQCQTI-AHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVD 65
Query: 57 KENEFGKGKSNDELK---------------EMLLVADYLTIKDTLDYLAETLANRIKNKS 101
N S+++LK ++++ A+YL IK LD +T+A+ IK+ +
Sbjct: 66 AANPC----SDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNT 121
Query: 102 VEYIRKFFGIENNFMPEEKEATRKE 126
VE+ RKFF IEN++ EE+EA R+E
Sbjct: 122 VEHTRKFFNIENDYTHEEEEAVRRE 146
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 12 QLFKVEEQGC--SRLCSHSSTSDGTSEDMVVLQ-----LPYIIKFCKAHGVSKENEFGKG 64
Q F+VEE S+ +H D ++ + + L +I++CK + V + N +
Sbjct: 14 QSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDEANPISEE 73
Query: 65 KSN--DE---------LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIEN 113
N DE + E++L A+YL IK D +T+A+ IK K+ E IR F IEN
Sbjct: 74 DLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIEN 133
Query: 114 NFMPEEKEATRKE 126
+F PEE+EA RKE
Sbjct: 134 DFTPEEEEAVRKE 146
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 44 PYIIKFCKAHGVSKENEFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVE 103
PY FCK + L E++L A+YL IK LD +T+AN I+ K+ E
Sbjct: 83 PYDRDFCKVDQPT-------------LFELILAANYLDIKPLLDVTCKTVANMIRGKTPE 129
Query: 104 YIRKFFGIENNFMPEEKEATRKEYE 128
IRK F I+N+F PEE+E RKE E
Sbjct: 130 EIRKIFNIKNDFTPEEEEQIRKENE 154
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 44 PYIIKFCKAHGVSKENEFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVE 103
PY FCK + L E++L A+YL IK LD +T+AN I+ K+ E
Sbjct: 83 PYDRDFCKVDQPT-------------LFELILAANYLDIKPLLDVTCKTVANMIRGKTPE 129
Query: 104 YIRKFFGIENNFMPEEKEATRKEYE 128
IRK F I+N+F PEE+E RKE E
Sbjct: 130 EIRKIFNIKNDFTPEEEEQIRKENE 154
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 5 IFEDGGQQLFKVEEQG---CSRLCSHSSTSDGTSEDMVVLQ-----LPYIIKFCKAHGVS 56
I + F+VEE+ C + +H S +D T + + L +I++C H V
Sbjct: 7 ILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKHHVD 66
Query: 57 KENEFGKGKSNDELK---------------EMLLVADYLTIKDTLDYLAETLANRIKNKS 101
N S+D+LK +++ A+YL IK D +T+A IK +
Sbjct: 67 AANPC----SDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNT 122
Query: 102 VEYIRKFFGIENNFMPEEKEATRKE 126
E IR+FF IEN+ PEE+ A R+E
Sbjct: 123 PEQIREFFNIENDLTPEEEAAIRRE 147
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 104 EIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 161
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 102 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 161
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 99 LFEIILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 158
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 102 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 161
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 98 LFEIILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 157
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 98 LFEIILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 157
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 97 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 156
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 97 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 156
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 97 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 156
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 96 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 155
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 96 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 155
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 96 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 155
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYE 128
L E++L A+YL IK LD +T+AN IK KS E IRK F I+N+F PEE++ R+E E
Sbjct: 98 LFEIILAANYLDIKPLLDIGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENE 156
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
E++L A+Y+ IK LD +T+AN IK KS E IRK F I N+F PEE+E R+E E
Sbjct: 110 EIILAANYMDIKPLLDVGCKTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEW 167
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 20/103 (19%)
Query: 46 IIKFCKAH------GVSKENEFGKGKSND--------------ELKEMLLVADYLTIKDT 85
++++C+ H G +E++ KS D L E++L ++YL IK
Sbjct: 54 VLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPL 113
Query: 86 LDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYE 128
LD +T+AN I+ KS E IRK F I N+F PEE+E RKE E
Sbjct: 114 LDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENE 156
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 43 LPYIIKFCKAHG---------VSKENEFGKGKSNDELKEMLLVADYLTIKDTLDYLAETL 93
L II++CK H V+ + EF K D L ++L ADYL + + +A+ +
Sbjct: 52 LAIIIEYCKKHVDDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAI 111
Query: 94 ANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYE 128
A+ +K+V IR+ F IEN++ PEE+E RK+ E
Sbjct: 112 ADYTADKTVNEIRELFNIENDYTPEEEEELRKKNE 146
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 11 QQLFKVEEQGCSRLCSHSSTSDGTS-EDMVVLQLPYIIKFCKAHGVSK------------ 57
++ V+ Q + + ++G ++ + L +I++CK H VS
Sbjct: 18 EEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEESKDELKK 77
Query: 58 -ENEFGKG-KSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNF 115
+ EF K + + L +++L A+YL IKD LD +T+A+ I K + IR GIEN+F
Sbjct: 78 WDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDF 137
Query: 116 MPEEKEATRKE 126
PEE+E RKE
Sbjct: 138 TPEEEEEIRKE 148
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 19/94 (20%)
Query: 43 LPYIIKFCKAH---GVSKENEF-GKGKSNDELK---------------EMLLVADYLTIK 83
L +I++CK H SK G S+D+LK E++L A+YL IK
Sbjct: 52 LAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIK 111
Query: 84 DTLDYLAETLANRIKNKSVEYIRKFFGIENNFMP 117
+ LD +T+A+ IK K+ E IR F I+N+F P
Sbjct: 112 NLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 102 ELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
L E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
L E++L A+YL IK LD +T+AN IK K+ E IRK F I+N+F EE+ RKE
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 156
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 60 EFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEE 119
EF K + + +++L +YL ++D L +T+A+ +K+ S E +R+ F IEN++ PEE
Sbjct: 95 EFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEE 154
Query: 120 KEATRKE 126
++A RKE
Sbjct: 155 EDAIRKE 161
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 72 EMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
+++L A+YL ++ D ++T+A+ IK+ + E +R+ F IEN+F PEE+EA R E
Sbjct: 130 DIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNE 184
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKEYEL 129
L E++L A+YL IK LD + +A I+ +S E IR+ F I N+F PEE+ A R+E E
Sbjct: 131 LYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEW 190
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 22/105 (20%)
Query: 43 LPYIIKFCKAHGVSKENEFGKGKS------NDELK---------------EMLLVADYLT 81
L +I++CK H V E G K NDELK +++L A+YL
Sbjct: 54 LAKVIEYCKKH-VEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLN 112
Query: 82 IKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
I LD + +A++++ K+ E +R F I+N++ PEE+ R E
Sbjct: 113 IGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNE 157
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 70 LKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMP 117
L +++L A+YL IK LD +T+A+ IK K+ E IRK F I+N+F P
Sbjct: 109 LFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 156
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 14 FKVEEQGCSRLC---SHSSTSDGTSEDMVVLQ-----LPYIIKFCKAHGVSKENEFGKG- 64
F++EE+ +R C +H ++ T ++VL+ L +I++C H V N
Sbjct: 16 FEIEEET-ARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDD 74
Query: 65 --KSNDELKE--------MLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENN 114
K + E E + A++L K L +T+A+ IK + + +R+FF IEN+
Sbjct: 75 LEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIEND 134
Query: 115 FMPEEKEATRKE 126
PEE+ A R+E
Sbjct: 135 LTPEEEAAIRRE 146
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 73 MLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
++L A+YL + L + ++T+A+ IK+K+ E +R+ F IEN+F PEE+E RKE
Sbjct: 98 IILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKE 151
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 32 DGTSEDMVVLQ------LPYIIKFCKAHGVSKENEFGKGKSNDELK--------EMLLVA 77
DG + D++ L+ L +I +C+ H SKE E K D +K ++++ A
Sbjct: 34 DGCATDVIPLRNVTSKILKIVIDYCEKHVKSKEEEDLKEWDADFMKTIETTILFDVMMAA 93
Query: 78 DYLTIKDTLDYLAETL-----ANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
+YL I+ LD +T+ A+ + K+ + IR F IEN+ EE R+E
Sbjct: 94 NYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREE 147
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Query: 43 LPYIIKFCKAHGVSKENEFGKGKS------NDELK---------------EMLLVADYLT 81
L +I++CK H V E G K N ELK ++L A+YL
Sbjct: 54 LAKVIEYCKKH-VEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLN 112
Query: 82 IKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEATRKE 126
I LD + +A++++ K+ +R+ F I+N++ PEE+ R E
Sbjct: 113 ISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNE 157
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 60 EFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNF 115
EF K + + +++L A+YL ++ L +T+A+ IK+K+ E +R+ F IEN+F
Sbjct: 94 EFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDF 149
>sp|Q929X1|PANE_LISIN Putative 2-dehydropantoate 2-reductase OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=lin2152 PE=3 SV=1
Length = 301
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 6 FEDGGQQLFKVEEQGCSR--LCSHSSTSDGTSEDMVVLQLPYIIKFCKAHGVSKENEFGK 63
++G L ++ E G +R L S G +D V+ + HG +K + F +
Sbjct: 105 IQNGAGHLERLSELGTTRTILLGISEHGAGREDDTTVI--------WRGHGRTKYSIF-Q 155
Query: 64 GKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEKEAT 123
G+ ND+LKE+L + I+ +Y A N + + G++N + E +E
Sbjct: 156 GELNDDLKELLTSSPAFPIEKHANYQAIIQEKLFINAVINPLTAVLGVQNGKLLENQEWH 215
Query: 124 R 124
R
Sbjct: 216 R 216
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1
Length = 679
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 68 DELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFM-PEEKEATRK 125
DE++E + VA +T K TL +A T+ NK+ Y G+ N + P+E EATR+
Sbjct: 238 DEIREAIKVAKSVTDKPTLIKVATTIGFGSPNKANTY-----GVHGNALGPKEAEATRQ 291
>sp|O34701|YOAU_BACSU Uncharacterized HTH-type transcriptional regulator YoaU OS=Bacillus
subtilis (strain 168) GN=yoaU PE=4 SV=1
Length = 290
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 12/132 (9%)
Query: 1 NEENIFEDGGQQLFKVEEQGCSRLCSHSSTSDGTSEDMVVLQLPYIIKFCKAHGVSKENE 60
N +IF G++L + E S + S LQL +I+ K HG+
Sbjct: 6 NHLHIFVKVGEKL-NITEAAKELFISQPAVSKAIKNLESSLQLKLLIR-DKHHGLM---- 59
Query: 61 FGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMPEEK 120
D KE+LL+A + ++ Y N++ N V+ I F + N MP+
Sbjct: 60 -----LTDIGKEILLLARQMKGIESKIYQVANRENKLLNGKVK-IGSFPAVSTNIMPQAI 113
Query: 121 EATRKEYELLRL 132
A R Y L+R+
Sbjct: 114 AAFRSNYPLIRI 125
>sp|Q6C6M0|ATG2_YARLI Autophagy-related protein 2 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=ATG2 PE=3 SV=2
Length = 1525
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 4 NIFEDGGQQLFKVEEQGCSRLCSHSSTSDGTSEDMVVLQLPYIIKFCKAHGVSKENEFGK 63
N F+D FK + + C S +SD DMV +P + F +++ + +
Sbjct: 880 NTFQDVDDCFFKAKNKDA---CESSCSSDNDDIDMVSDDVPNNMSFVESYYGGDKPSQSR 936
Query: 64 GKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKNKSVEYIRKFFGIENNFMP 117
++ E AD+L D LD L + R++ + + + +F E MP
Sbjct: 937 KSGRQKMAESYTHADFLLDSD-LDSLVKR--ERVRFEEICFEEDYFDKEEEDMP 987
>sp|Q99LI8|HGS_MOUSE Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus
musculus GN=Hgs PE=1 SV=2
Length = 775
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 46 IIKFCKAHGVSKENEFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKN----KS 101
++K C G + +E ++ +ELKE+L + +++ + YL + A+ +N K
Sbjct: 71 VVKNC---GQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFRNEPKYKV 127
Query: 102 VEYIRKFFGIENNFMPEEKEA 122
V+ + +E + PE KE+
Sbjct: 128 VQDTYQIMKVEGHVFPEFKES 148
>sp|Q9JJ50|HGS_RAT Hepatocyte growth factor-regulated tyrosine kinase substrate
OS=Rattus norvegicus GN=Hgs PE=1 SV=1
Length = 776
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 46 IIKFCKAHGVSKENEFGKGKSNDELKEMLLVADYLTIKDTLDYLAETLANRIKN----KS 101
++K C G + +E ++ +ELKE+L + +++ + YL + A+ +N K
Sbjct: 71 VVKNC---GQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAFRNEPKYKV 127
Query: 102 VEYIRKFFGIENNFMPEEKEA 122
V+ + +E + PE KE+
Sbjct: 128 VQDTYQIMKVEGHVFPEFKES 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,708,475
Number of Sequences: 539616
Number of extensions: 1851848
Number of successful extensions: 4225
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 4157
Number of HSP's gapped (non-prelim): 95
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)