Query 046605
Match_columns 487
No_of_seqs 138 out of 1266
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 03:48:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.3E-65 4.5E-70 510.2 36.5 433 6-483 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 7.3E-61 2.5E-65 484.4 40.9 446 5-484 4-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.1E-61 1.7E-65 487.3 35.4 458 1-486 1-481 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 3.2E-59 1.1E-63 470.7 38.4 439 5-483 7-462 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-59 7.5E-64 470.5 36.3 441 1-484 1-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.3E-45 1.1E-49 367.0 31.1 405 5-484 10-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 5.9E-45 2E-49 362.4 24.4 372 5-483 20-399 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.7E-41 9.4E-46 337.3 25.5 377 8-484 1-400 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.7E-40 5.7E-45 331.9 30.5 384 5-483 18-412 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 9.7E-40 3.3E-44 324.9 32.5 383 5-483 2-397 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 2.7E-40 9.4E-45 330.2 25.4 377 8-483 1-400 (416)
12 3h4t_A Glycosyltransferase GTF 100.0 3.4E-40 1.2E-44 327.8 24.3 366 8-482 1-380 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.6E-39 5.4E-44 327.2 24.9 389 5-484 18-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 8.6E-39 2.9E-43 321.0 28.6 389 1-482 1-397 (430)
15 2p6p_A Glycosyl transferase; X 100.0 1.3E-38 4.6E-43 314.8 27.3 366 8-487 1-382 (384)
16 4fzr_A SSFS6; structural genom 100.0 6.9E-37 2.4E-41 303.9 19.6 357 5-462 13-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.1E-35 3.9E-40 295.1 26.4 362 5-483 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.6E-35 9E-40 291.9 20.3 369 7-485 1-389 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.9E-32 1.7E-36 270.2 29.0 371 4-483 17-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 8.1E-29 2.8E-33 242.0 25.0 314 8-454 3-331 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.7E-27 5.8E-32 206.9 15.4 163 271-462 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 9.1E-19 3.1E-23 171.1 27.1 307 8-443 7-323 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 3.9E-15 1.3E-19 138.0 22.0 118 285-419 156-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.8E-15 6.2E-20 134.3 9.2 132 284-441 26-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.4 9.6E-12 3.3E-16 121.6 15.4 137 285-455 197-342 (376)
26 3okp_A GDP-mannose-dependent a 99.3 5.3E-10 1.8E-14 109.7 27.2 313 5-443 2-343 (394)
27 3c48_A Predicted glycosyltrans 99.3 2.2E-09 7.5E-14 107.0 29.5 79 348-443 305-390 (438)
28 3dzc_A UDP-N-acetylglucosamine 99.3 1.6E-11 5.4E-16 120.8 13.2 138 285-455 229-375 (396)
29 2gek_A Phosphatidylinositol ma 99.3 2E-09 6.7E-14 106.1 28.0 312 5-452 18-354 (406)
30 3ot5_A UDP-N-acetylglucosamine 99.3 1.4E-10 4.9E-15 114.1 17.8 138 285-455 223-369 (403)
31 1vgv_A UDP-N-acetylglucosamine 99.2 7.6E-11 2.6E-15 115.5 13.3 136 285-453 204-348 (384)
32 2r60_A Glycosyl transferase, g 99.2 3.9E-09 1.3E-13 107.2 26.1 79 348-443 334-423 (499)
33 3fro_A GLGA glycogen synthase; 99.2 1.8E-08 6.2E-13 100.2 28.5 145 288-458 252-411 (439)
34 2jjm_A Glycosyl transferase, g 99.1 1.4E-07 4.8E-12 92.5 31.9 314 7-443 15-349 (394)
35 2iw1_A Lipopolysaccharide core 99.1 9E-09 3.1E-13 100.1 22.7 139 286-454 195-344 (374)
36 3beo_A UDP-N-acetylglucosamine 99.1 3.3E-09 1.1E-13 103.4 19.1 136 285-453 204-348 (375)
37 2iuy_A Avigt4, glycosyltransfe 99.1 4.6E-09 1.6E-13 101.1 18.2 127 289-443 164-307 (342)
38 2x6q_A Trehalose-synthase TRET 99.0 3.8E-08 1.3E-12 97.4 23.0 82 348-451 292-383 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.8 7.7E-08 2.6E-12 93.7 14.7 127 286-443 203-341 (385)
40 3s28_A Sucrose synthase 1; gly 98.6 2E-06 6.9E-11 91.0 19.7 135 287-442 572-728 (816)
41 3oy2_A Glycosyltransferase B73 98.6 1.7E-05 5.9E-10 77.9 24.5 140 286-452 183-360 (413)
42 1rzu_A Glycogen synthase 1; gl 98.5 4.8E-06 1.6E-10 83.9 19.1 126 288-442 292-438 (485)
43 2qzs_A Glycogen synthase; glyc 98.4 2.3E-05 8E-10 78.8 21.8 126 288-442 293-439 (485)
44 2vsy_A XCC0866; transferase, g 98.4 0.00041 1.4E-08 71.2 30.2 88 349-453 434-528 (568)
45 2f9f_A First mannosyl transfer 98.4 1.6E-06 5.6E-11 74.6 9.9 140 288-458 24-174 (177)
46 2xci_A KDO-transferase, 3-deox 98.2 0.00038 1.3E-08 67.4 22.9 98 350-462 261-364 (374)
47 2hy7_A Glucuronosyltransferase 98.2 0.0005 1.7E-08 67.4 23.6 75 348-443 264-351 (406)
48 2x0d_A WSAF; GT4 family, trans 97.9 0.00036 1.2E-08 68.5 17.2 84 349-453 295-385 (413)
49 4gyw_A UDP-N-acetylglucosamine 97.7 0.0011 3.7E-08 69.9 17.3 135 285-443 521-667 (723)
50 3tov_A Glycosyl transferase fa 97.4 0.0074 2.5E-07 57.6 17.5 106 5-145 6-115 (349)
51 3qhp_A Type 1 capsular polysac 97.3 0.0027 9.4E-08 53.1 12.4 126 287-443 2-139 (166)
52 3q3e_A HMW1C-like glycosyltran 97.2 0.0029 9.9E-08 64.1 13.1 145 287-454 441-595 (631)
53 3rhz_A GTF3, nucleotide sugar 97.2 0.00098 3.3E-08 63.3 9.0 111 350-482 215-337 (339)
54 1psw_A ADP-heptose LPS heptosy 97.0 0.02 6.9E-07 54.4 16.5 103 8-145 1-106 (348)
55 2bfw_A GLGA glycogen synthase; 96.5 0.078 2.7E-06 45.5 15.1 76 350-443 96-179 (200)
56 2gt1_A Lipopolysaccharide hept 95.6 0.24 8.1E-06 46.4 14.3 46 8-53 1-48 (326)
57 2wqk_A 5'-nucleotidase SURE; S 94.3 0.25 8.6E-06 44.1 10.0 114 7-148 1-127 (251)
58 2phj_A 5'-nucleotidase SURE; S 92.9 0.6 2.1E-05 41.4 9.7 114 7-148 1-127 (251)
59 3vue_A GBSS-I, granule-bound s 92.7 0.95 3.3E-05 45.6 12.3 137 288-443 328-476 (536)
60 2ywr_A Phosphoribosylglycinami 89.1 3.5 0.00012 35.8 10.8 107 7-148 1-110 (216)
61 3auf_A Glycinamide ribonucleot 88.8 5.1 0.00017 35.1 11.7 110 5-149 20-132 (229)
62 3av3_A Phosphoribosylglycinami 87.6 5.3 0.00018 34.5 10.9 108 7-149 3-113 (212)
63 3vue_A GBSS-I, granule-bound s 86.5 0.7 2.4E-05 46.6 5.3 44 1-44 1-52 (536)
64 1g5t_A COB(I)alamin adenosyltr 86.1 7 0.00024 33.2 10.6 97 7-129 28-130 (196)
65 2bw0_A 10-FTHFDH, 10-formyltet 82.8 5.1 0.00017 37.3 9.0 34 5-43 20-53 (329)
66 3rfo_A Methionyl-tRNA formyltr 81.5 7 0.00024 36.1 9.4 36 5-45 2-37 (317)
67 2e6c_A 5'-nucleotidase SURE; S 81.4 10 0.00034 33.5 9.8 57 8-70 1-57 (244)
68 1l5x_A SurviVal protein E; str 81.3 8.6 0.00029 34.7 9.5 114 8-149 1-128 (280)
69 1j9j_A Stationary phase surviV 80.6 9.4 0.00032 33.8 9.4 114 8-148 1-128 (247)
70 1jkx_A GART;, phosphoribosylgl 79.4 21 0.00073 30.6 11.2 107 8-149 1-110 (212)
71 3t5t_A Putative glycosyltransf 78.9 31 0.0011 34.0 13.5 109 350-484 353-472 (496)
72 3q0i_A Methionyl-tRNA formyltr 78.8 12 0.00043 34.4 10.1 35 5-44 5-39 (318)
73 4dim_A Phosphoribosylglycinami 77.6 6.1 0.00021 37.8 8.1 36 4-44 4-39 (403)
74 3zqu_A Probable aromatic acid 77.5 1.4 4.9E-05 37.9 3.1 45 6-51 3-47 (209)
75 2v4n_A Multifunctional protein 76.9 14 0.00047 32.8 9.4 43 8-52 2-44 (254)
76 3lqk_A Dipicolinate synthase s 76.4 3.4 0.00012 35.4 5.1 45 5-50 5-50 (201)
77 1mvl_A PPC decarboxylase athal 76.3 2.8 9.6E-05 36.1 4.6 47 5-53 17-63 (209)
78 3iqw_A Tail-anchored protein t 76.2 12 0.0004 34.9 9.3 42 6-47 14-56 (334)
79 1ccw_A Protein (glutamate muta 74.2 4.8 0.00016 32.0 5.2 38 6-43 2-39 (137)
80 3ug7_A Arsenical pump-driving 73.5 9.6 0.00033 35.8 8.0 48 5-53 23-71 (349)
81 3qjg_A Epidermin biosynthesis 73.0 3.8 0.00013 34.2 4.5 45 8-53 6-50 (175)
82 1meo_A Phosophoribosylglycinam 73.0 33 0.0011 29.3 10.6 40 110-149 70-110 (209)
83 3pdi_B Nitrogenase MOFE cofact 72.2 19 0.00066 35.1 10.1 34 110-146 366-399 (458)
84 2iz6_A Molybdenum cofactor car 72.1 24 0.00083 29.3 9.2 135 273-443 34-173 (176)
85 3fgn_A Dethiobiotin synthetase 71.1 35 0.0012 30.2 10.6 37 6-42 25-62 (251)
86 3io3_A DEHA2D07832P; chaperone 70.5 16 0.00054 34.3 8.7 41 6-46 16-59 (348)
87 4b4k_A N5-carboxyaminoimidazol 69.3 47 0.0016 27.4 12.0 148 286-467 22-176 (181)
88 4ds3_A Phosphoribosylglycinami 68.8 26 0.0009 30.0 9.0 108 5-148 5-116 (209)
89 3mcu_A Dipicolinate synthase, 68.8 5 0.00017 34.4 4.4 42 5-47 3-45 (207)
90 3zq6_A Putative arsenical pump 68.7 26 0.00088 32.3 9.7 45 8-53 14-59 (324)
91 4a1f_A DNAB helicase, replicat 68.5 6.9 0.00024 36.5 5.7 42 9-50 48-89 (338)
92 3rg8_A Phosphoribosylaminoimid 68.2 46 0.0016 26.9 10.7 139 287-465 3-150 (159)
93 2ejb_A Probable aromatic acid 67.9 6.9 0.00024 33.0 5.1 44 8-52 2-45 (189)
94 1fmt_A Methionyl-tRNA FMet for 67.4 12 0.00041 34.5 7.0 40 110-149 72-112 (314)
95 3kcq_A Phosphoribosylglycinami 67.4 47 0.0016 28.5 10.3 105 4-149 5-113 (215)
96 3tqr_A Phosphoribosylglycinami 67.2 34 0.0012 29.4 9.4 108 6-149 4-114 (215)
97 3vot_A L-amino acid ligase, BL 66.8 30 0.001 33.2 10.2 34 110-143 66-101 (425)
98 1qzu_A Hypothetical protein MD 66.3 5.5 0.00019 34.2 4.1 48 5-53 17-65 (206)
99 1kjn_A MTH0777; hypotethical p 65.5 3.8 0.00013 32.6 2.7 45 7-51 6-52 (157)
100 3bgw_A DNAB-like replicative h 65.4 20 0.0007 34.8 8.6 45 7-51 197-241 (444)
101 3ors_A N5-carboxyaminoimidazol 65.1 43 0.0015 27.2 8.8 142 287-465 4-155 (163)
102 1p3y_1 MRSD protein; flavoprot 65.0 4.8 0.00016 34.2 3.5 47 5-52 6-52 (194)
103 3o1l_A Formyltetrahydrofolate 64.8 50 0.0017 30.0 10.5 104 5-148 103-211 (302)
104 3da8_A Probable 5'-phosphoribo 64.6 13 0.00043 32.1 6.2 108 5-148 10-119 (215)
105 4b4o_A Epimerase family protei 63.8 7.8 0.00027 35.2 5.0 35 8-46 1-35 (298)
106 3dm5_A SRP54, signal recogniti 63.7 38 0.0013 32.8 10.0 43 7-49 100-142 (443)
107 1sbz_A Probable aromatic acid 63.6 6.9 0.00024 33.3 4.2 43 8-51 1-44 (197)
108 1g63_A Epidermin modifying enz 63.3 5.6 0.00019 33.4 3.5 45 8-53 3-47 (181)
109 3igf_A ALL4481 protein; two-do 63.0 11 0.00036 35.8 5.8 37 7-43 1-38 (374)
110 1id1_A Putative potassium chan 62.9 5.1 0.00017 32.3 3.2 34 6-44 2-35 (153)
111 3tqq_A Methionyl-tRNA formyltr 62.8 27 0.00093 32.1 8.5 33 7-44 2-34 (314)
112 3trh_A Phosphoribosylaminoimid 62.3 63 0.0022 26.4 10.9 144 286-466 6-159 (169)
113 2lpm_A Two-component response 61.5 7.9 0.00027 30.1 3.9 38 110-147 44-86 (123)
114 2r8r_A Sensor protein; KDPD, P 61.4 13 0.00044 32.4 5.6 39 7-45 6-44 (228)
115 3l4e_A Uncharacterized peptida 61.2 25 0.00086 30.0 7.4 48 274-321 16-63 (206)
116 2q6t_A DNAB replication FORK h 60.2 23 0.00079 34.4 8.0 42 7-48 200-242 (444)
117 2yxb_A Coenzyme B12-dependent 60.1 8.6 0.00029 31.5 4.1 40 5-44 16-55 (161)
118 3mc3_A DSRE/DSRF-like family p 60.0 13 0.00046 29.2 5.1 42 7-48 15-59 (134)
119 4grd_A N5-CAIR mutase, phospho 59.8 71 0.0024 26.2 10.7 147 285-467 11-166 (173)
120 4gi5_A Quinone reductase; prot 59.0 14 0.00047 33.4 5.6 38 5-42 20-60 (280)
121 3ty2_A 5'-nucleotidase SURE; s 58.9 12 0.00042 33.2 5.1 46 5-52 9-54 (261)
122 2bln_A Protein YFBG; transfera 58.4 19 0.00066 32.9 6.6 40 110-149 66-106 (305)
123 2dzd_A Pyruvate carboxylase; b 58.4 36 0.0012 33.0 9.1 38 1-44 1-38 (461)
124 3gpi_A NAD-dependent epimerase 58.4 11 0.00037 33.9 5.0 34 6-44 2-35 (286)
125 3kkl_A Probable chaperone prot 58.4 15 0.00051 32.4 5.7 39 6-44 2-51 (244)
126 3gl9_A Response regulator; bet 58.3 20 0.00068 27.0 5.9 40 110-149 37-85 (122)
127 3obi_A Formyltetrahydrofolate 57.1 1.1E+02 0.0038 27.5 12.0 105 5-149 87-197 (288)
128 4egb_A DTDP-glucose 4,6-dehydr 56.9 57 0.0019 29.9 9.9 35 5-43 22-58 (346)
129 3to5_A CHEY homolog; alpha(5)b 56.7 16 0.00055 28.7 5.1 39 112-150 50-97 (134)
130 3lp6_A Phosphoribosylaminoimid 56.7 82 0.0028 25.9 11.5 142 286-466 7-158 (174)
131 3ih5_A Electron transfer flavo 56.7 23 0.00079 30.5 6.4 111 7-147 3-122 (217)
132 2hy5_B Intracellular sulfur ox 55.7 14 0.00049 29.2 4.6 44 1-46 1-47 (136)
133 1y80_A Predicted cobalamin bin 55.7 14 0.00048 31.6 5.0 40 6-45 87-126 (210)
134 3ouz_A Biotin carboxylase; str 55.0 32 0.0011 33.3 8.0 36 4-44 3-38 (446)
135 3kuu_A Phosphoribosylaminoimid 54.6 88 0.003 25.6 11.4 144 287-467 13-166 (174)
136 3p9x_A Phosphoribosylglycinami 54.4 1E+02 0.0035 26.3 11.8 107 7-148 2-111 (211)
137 2vo1_A CTP synthase 1; pyrimid 54.1 14 0.00047 32.9 4.5 45 5-49 20-67 (295)
138 3qvl_A Putative hydantoin race 53.9 73 0.0025 27.9 9.4 38 7-44 1-39 (245)
139 2i2x_B MTAC, methyltransferase 53.9 19 0.00064 32.1 5.6 40 5-44 121-160 (258)
140 2qs7_A Uncharacterized protein 53.9 14 0.00047 29.6 4.3 36 11-46 12-47 (144)
141 1uqt_A Alpha, alpha-trehalose- 53.5 43 0.0015 32.9 8.6 109 351-485 333-454 (482)
142 2xj4_A MIPZ; replication, cell 52.9 14 0.00049 33.3 4.8 44 6-49 2-47 (286)
143 2g1u_A Hypothetical protein TM 52.8 10 0.00036 30.5 3.5 36 4-44 16-51 (155)
144 3n7t_A Macrophage binding prot 52.3 25 0.00084 31.1 6.0 38 7-44 9-57 (247)
145 3nb0_A Glycogen [starch] synth 50.7 77 0.0027 32.6 9.9 36 360-395 513-550 (725)
146 2a5l_A Trp repressor binding p 50.3 18 0.00063 30.3 4.8 40 5-44 3-43 (200)
147 1jx7_A Hypothetical protein YC 49.8 17 0.00058 27.4 4.1 39 8-46 2-45 (117)
148 3t6k_A Response regulator rece 49.8 32 0.0011 26.4 5.9 40 111-150 40-88 (136)
149 3g0o_A 3-hydroxyisobutyrate de 49.7 9.3 0.00032 34.9 3.0 38 1-43 1-38 (303)
150 1qgu_B Protein (nitrogenase mo 49.5 78 0.0027 31.3 9.8 34 110-146 425-465 (519)
151 2i2c_A Probable inorganic poly 49.4 9.9 0.00034 34.2 3.0 26 370-395 38-69 (272)
152 1qkk_A DCTD, C4-dicarboxylate 49.3 60 0.002 25.4 7.7 63 386-462 74-136 (155)
153 3dfz_A SIRC, precorrin-2 dehyd 49.3 1.3E+02 0.0044 25.9 10.8 151 279-463 26-185 (223)
154 1e2b_A Enzyme IIB-cellobiose; 48.9 35 0.0012 25.5 5.6 39 5-43 1-39 (106)
155 3m6m_D Sensory/regulatory prot 48.3 25 0.00087 27.3 5.1 40 110-149 49-99 (143)
156 3llv_A Exopolyphosphatase-rela 47.1 9.9 0.00034 29.9 2.4 34 6-44 5-38 (141)
157 3f6p_A Transcriptional regulat 47.0 31 0.0011 25.7 5.3 41 110-150 37-83 (120)
158 3eag_A UDP-N-acetylmuramate:L- 46.4 16 0.00054 33.9 4.0 35 6-44 3-37 (326)
159 2ca5_A MXIH; transport protein 46.3 41 0.0014 23.7 5.0 54 430-487 26-83 (85)
160 1bg6_A N-(1-D-carboxylethyl)-L 46.2 11 0.00038 35.2 3.0 34 5-43 2-35 (359)
161 3kjh_A CO dehydrogenase/acetyl 45.7 13 0.00045 32.4 3.2 38 8-45 1-38 (254)
162 2zki_A 199AA long hypothetical 45.5 19 0.00065 30.3 4.1 38 6-44 3-41 (199)
163 3hn2_A 2-dehydropantoate 2-red 45.5 20 0.00069 32.8 4.6 33 8-45 3-35 (312)
164 3bh0_A DNAB-like replicative h 45.3 32 0.0011 31.5 5.9 42 8-49 69-110 (315)
165 2zts_A Putative uncharacterize 44.9 16 0.00055 31.8 3.7 43 8-50 31-74 (251)
166 1rw7_A YDR533CP; alpha-beta sa 44.9 36 0.0012 29.8 6.0 39 7-45 3-52 (243)
167 3dhn_A NAD-dependent epimerase 44.7 17 0.0006 31.1 3.9 34 7-44 4-37 (227)
168 3gi1_A LBP, laminin-binding pr 44.7 72 0.0025 28.7 8.1 40 109-148 218-259 (286)
169 3ezx_A MMCP 1, monomethylamine 44.6 25 0.00087 30.2 4.8 41 5-45 90-130 (215)
170 1o4v_A Phosphoribosylaminoimid 44.2 1.4E+02 0.0046 24.8 13.1 143 286-467 13-165 (183)
171 1q57_A DNA primase/helicase; d 44.2 46 0.0016 32.8 7.3 41 9-49 244-285 (503)
172 2ew2_A 2-dehydropantoate 2-red 44.1 12 0.00042 34.0 2.9 33 6-43 2-34 (316)
173 3lou_A Formyltetrahydrofolate 43.6 1.8E+02 0.0063 26.1 11.9 105 5-149 93-202 (292)
174 3l6d_A Putative oxidoreductase 42.8 12 0.00041 34.3 2.5 36 3-43 5-40 (306)
175 1lss_A TRK system potassium up 42.5 18 0.00062 28.0 3.3 34 6-44 3-36 (140)
176 2gk4_A Conserved hypothetical 42.1 40 0.0014 29.3 5.6 26 18-45 28-53 (232)
177 1evy_A Glycerol-3-phosphate de 42.1 12 0.0004 35.3 2.4 35 5-44 13-47 (366)
178 1u0t_A Inorganic polyphosphate 41.6 26 0.00089 32.0 4.6 32 362-395 72-107 (307)
179 3c3m_A Response regulator rece 41.5 48 0.0017 25.3 5.8 40 110-149 38-86 (138)
180 4huj_A Uncharacterized protein 41.5 11 0.00036 32.7 1.9 35 5-44 21-55 (220)
181 2lnd_A De novo designed protei 41.1 38 0.0013 23.4 4.1 50 385-443 49-100 (112)
182 3ghy_A Ketopantoate reductase 41.0 14 0.00047 34.4 2.7 34 6-44 2-35 (335)
183 3gt7_A Sensor protein; structu 40.8 47 0.0016 26.1 5.7 40 110-149 42-90 (154)
184 4inf_A Metal-dependent hydrola 40.6 1.3E+02 0.0043 28.3 9.3 52 274-325 163-214 (373)
185 2q5c_A NTRC family transcripti 40.3 1.6E+02 0.0056 24.6 9.5 37 111-150 134-170 (196)
186 3q9l_A Septum site-determining 40.2 29 0.00098 30.4 4.6 39 8-46 2-42 (260)
187 3f6r_A Flavodoxin; FMN binding 40.2 30 0.001 27.3 4.3 39 7-45 1-40 (148)
188 3vps_A TUNA, NAD-dependent epi 40.1 25 0.00084 31.9 4.3 41 1-45 1-41 (321)
189 1xmp_A PURE, phosphoribosylami 40.1 1.5E+02 0.0052 24.2 12.9 145 286-467 11-165 (170)
190 1o97_C Electron transferring f 39.8 39 0.0013 30.1 5.3 39 110-148 103-147 (264)
191 3nhm_A Response regulator; pro 39.7 61 0.0021 24.3 6.0 39 110-148 38-85 (133)
192 1gsa_A Glutathione synthetase; 39.6 23 0.00078 32.1 4.0 37 8-44 2-41 (316)
193 1dbw_A Transcriptional regulat 38.9 53 0.0018 24.5 5.5 41 110-150 38-85 (126)
194 3i83_A 2-dehydropantoate 2-red 38.8 24 0.00081 32.5 3.9 33 8-45 3-35 (320)
195 3oow_A Phosphoribosylaminoimid 38.7 1.6E+02 0.0054 24.0 12.9 144 287-467 6-159 (166)
196 2vpq_A Acetyl-COA carboxylase; 38.5 80 0.0027 30.4 7.9 32 8-44 2-33 (451)
197 3obb_A Probable 3-hydroxyisobu 38.5 28 0.00095 31.7 4.3 31 7-42 3-33 (300)
198 1hdo_A Biliverdin IX beta redu 38.3 36 0.0012 28.3 4.8 33 8-44 4-36 (206)
199 3a10_A Response regulator; pho 38.3 74 0.0025 23.1 6.2 40 110-149 36-82 (116)
200 3dfu_A Uncharacterized protein 38.2 21 0.00073 31.1 3.2 34 6-44 5-38 (232)
201 3eod_A Protein HNR; response r 38.0 55 0.0019 24.5 5.5 40 111-150 43-89 (130)
202 1g3q_A MIND ATPase, cell divis 37.8 35 0.0012 29.4 4.7 37 10-46 5-42 (237)
203 1efv_B Electron transfer flavo 37.7 44 0.0015 29.6 5.3 39 110-148 107-151 (255)
204 3hr8_A Protein RECA; alpha and 37.7 2E+02 0.0069 26.7 10.1 40 9-48 63-102 (356)
205 3tov_A Glycosyl transferase fa 37.5 1.5E+02 0.0053 27.2 9.5 99 8-148 186-288 (349)
206 1pno_A NAD(P) transhydrogenase 37.5 35 0.0012 27.8 4.0 38 8-45 24-64 (180)
207 1p9o_A Phosphopantothenoylcyst 37.4 20 0.00067 33.0 3.0 24 23-46 67-90 (313)
208 1xp8_A RECA protein, recombina 37.4 1E+02 0.0035 28.8 8.1 40 9-48 76-115 (366)
209 2rjn_A Response regulator rece 37.2 54 0.0019 25.6 5.5 42 110-151 42-90 (154)
210 1d4o_A NADP(H) transhydrogenas 37.1 34 0.0011 28.0 3.9 38 8-45 23-63 (184)
211 2r6j_A Eugenol synthase 1; phe 36.7 37 0.0013 30.8 5.0 33 9-45 13-45 (318)
212 4dll_A 2-hydroxy-3-oxopropiona 36.7 33 0.0011 31.5 4.5 33 6-43 30-62 (320)
213 1cp2_A CP2, nitrogenase iron p 36.6 37 0.0013 30.0 4.8 38 8-45 2-39 (269)
214 1ehi_A LMDDL2, D-alanine:D-lac 36.6 33 0.0011 32.3 4.7 38 6-43 2-44 (377)
215 1hjr_A Holliday junction resol 36.6 60 0.0021 26.3 5.5 43 107-149 47-104 (158)
216 2h78_A Hibadh, 3-hydroxyisobut 36.5 24 0.00081 32.0 3.5 33 6-43 2-34 (302)
217 4e7p_A Response regulator; DNA 36.3 59 0.002 25.2 5.6 42 109-150 56-104 (150)
218 1rcu_A Conserved hypothetical 36.2 1.8E+02 0.0062 24.4 8.6 96 273-394 47-149 (195)
219 3pdi_A Nitrogenase MOFE cofact 36.2 25 0.00085 34.6 3.8 34 110-146 392-425 (483)
220 2yrx_A Phosphoribosylglycinami 36.1 1.5E+02 0.0053 28.4 9.5 34 5-43 19-53 (451)
221 3doj_A AT3G25530, dehydrogenas 36.1 22 0.00076 32.5 3.2 34 5-43 19-52 (310)
222 1tmy_A CHEY protein, TMY; chem 36.0 58 0.002 23.9 5.2 40 111-150 39-85 (120)
223 1zgz_A Torcad operon transcrip 35.8 60 0.002 23.9 5.3 40 110-149 37-82 (122)
224 2r6a_A DNAB helicase, replicat 35.7 56 0.0019 31.7 6.2 42 7-48 203-245 (454)
225 3ew7_A LMO0794 protein; Q8Y8U8 35.7 37 0.0013 28.6 4.5 33 8-44 1-33 (221)
226 1z7e_A Protein aRNA; rossmann 35.4 38 0.0013 34.8 5.2 40 110-149 66-106 (660)
227 1efp_B ETF, protein (electron 35.3 44 0.0015 29.5 4.9 39 110-148 104-148 (252)
228 1qv9_A F420-dependent methylen 35.1 78 0.0027 27.4 6.0 41 110-150 55-101 (283)
229 1tvm_A PTS system, galactitol- 34.8 89 0.003 23.5 6.0 39 4-42 18-57 (113)
230 1u11_A PURE (N5-carboxyaminoim 34.7 1.9E+02 0.0066 23.8 11.9 145 286-467 21-175 (182)
231 1mio_B Nitrogenase molybdenum 34.5 42 0.0014 32.7 5.0 34 110-146 376-409 (458)
232 3qxc_A Dethiobiotin synthetase 34.5 46 0.0016 29.2 4.9 38 5-42 18-57 (242)
233 3hv2_A Response regulator/HD d 34.4 58 0.002 25.4 5.3 41 110-150 49-96 (153)
234 4hb9_A Similarities with proba 34.3 22 0.00074 33.6 3.0 31 7-42 1-31 (412)
235 3qha_A Putative oxidoreductase 34.3 27 0.00093 31.7 3.5 33 7-44 15-47 (296)
236 3u7q_B Nitrogenase molybdenum- 34.1 44 0.0015 33.2 5.2 34 110-146 429-469 (523)
237 2fsv_C NAD(P) transhydrogenase 33.9 41 0.0014 28.0 4.0 38 8-45 47-87 (203)
238 3grc_A Sensor protein, kinase; 33.8 57 0.0019 24.9 5.0 42 110-151 41-91 (140)
239 4ep4_A Crossover junction endo 33.5 1E+02 0.0035 25.1 6.5 44 106-149 50-108 (166)
240 3kht_A Response regulator; PSI 33.4 84 0.0029 24.0 6.0 40 110-149 42-90 (144)
241 3k96_A Glycerol-3-phosphate de 33.4 23 0.0008 33.2 2.9 35 5-44 27-61 (356)
242 4eg0_A D-alanine--D-alanine li 33.3 66 0.0022 29.3 6.0 39 7-45 13-55 (317)
243 3u7q_A Nitrogenase molybdenum- 33.3 30 0.001 34.1 3.8 35 110-147 408-442 (492)
244 1djl_A Transhydrogenase DIII; 33.3 43 0.0015 28.0 4.0 38 8-45 46-86 (207)
245 3pid_A UDP-glucose 6-dehydroge 33.3 23 0.00078 34.3 2.8 35 3-43 32-66 (432)
246 3ius_A Uncharacterized conserv 33.2 36 0.0012 30.3 4.1 33 7-44 5-37 (286)
247 3eod_A Protein HNR; response r 33.2 81 0.0028 23.5 5.8 39 1-43 1-39 (130)
248 1f0y_A HCDH, L-3-hydroxyacyl-C 33.0 22 0.00075 32.3 2.6 35 5-44 13-47 (302)
249 2dpo_A L-gulonate 3-dehydrogen 33.0 23 0.0008 32.6 2.8 38 1-44 1-38 (319)
250 1ydg_A Trp repressor binding p 32.9 52 0.0018 27.8 4.9 40 5-44 4-44 (211)
251 3b2n_A Uncharacterized protein 32.9 62 0.0021 24.5 5.0 40 110-149 40-86 (133)
252 4e5s_A MCCFLIKE protein (BA_56 32.9 56 0.0019 30.2 5.4 72 300-395 63-136 (331)
253 2q62_A ARSH; alpha/beta, flavo 32.8 56 0.0019 28.7 5.1 40 4-43 31-73 (247)
254 1e4e_A Vancomycin/teicoplanin 32.8 31 0.001 32.0 3.7 38 6-43 2-43 (343)
255 4e5v_A Putative THUA-like prot 32.7 54 0.0019 29.5 5.1 39 5-44 2-43 (281)
256 3i42_A Response regulator rece 32.7 56 0.0019 24.4 4.7 39 110-148 38-85 (127)
257 2a9o_A Response regulator; ess 32.6 76 0.0026 23.1 5.4 39 112-150 38-82 (120)
258 1hyq_A MIND, cell division inh 32.5 40 0.0014 29.6 4.3 37 10-46 5-42 (263)
259 2r85_A PURP protein PF1517; AT 32.4 38 0.0013 31.0 4.3 32 7-44 2-33 (334)
260 1xhf_A DYE resistance, aerobic 32.3 85 0.0029 23.0 5.7 40 110-149 38-83 (123)
261 2o1e_A YCDH; alpha-beta protei 32.2 1.4E+02 0.0046 27.3 7.9 39 109-147 229-269 (312)
262 3rpe_A MDAB, modulator of drug 32.1 52 0.0018 28.3 4.7 40 4-43 22-68 (218)
263 3icc_A Putative 3-oxoacyl-(acy 32.0 2.1E+02 0.0072 24.5 9.1 34 9-45 8-41 (255)
264 4e12_A Diketoreductase; oxidor 31.9 31 0.0011 31.0 3.4 34 5-43 2-35 (283)
265 3cky_A 2-hydroxymethyl glutara 31.8 41 0.0014 30.3 4.3 33 6-43 3-35 (301)
266 3end_A Light-independent proto 31.8 53 0.0018 29.7 5.1 39 7-45 41-79 (307)
267 3of5_A Dethiobiotin synthetase 31.8 57 0.002 28.2 5.0 37 6-42 3-40 (228)
268 2pl1_A Transcriptional regulat 31.8 1E+02 0.0035 22.4 6.1 40 110-149 35-81 (121)
269 2qxy_A Response regulator; reg 31.7 64 0.0022 24.6 5.0 39 110-149 39-84 (142)
270 1qyd_A Pinoresinol-lariciresin 31.7 45 0.0015 30.1 4.6 35 7-45 4-38 (313)
271 3cg4_A Response regulator rece 31.5 73 0.0025 24.2 5.3 39 1-43 1-39 (142)
272 2afh_E Nitrogenase iron protei 31.4 51 0.0017 29.5 4.8 40 7-46 2-41 (289)
273 1srr_A SPO0F, sporulation resp 31.3 64 0.0022 23.9 4.8 37 113-149 41-84 (124)
274 3cu5_A Two component transcrip 31.2 73 0.0025 24.4 5.2 38 111-148 41-85 (141)
275 2w36_A Endonuclease V; hypoxan 31.2 79 0.0027 27.3 5.6 31 118-148 102-139 (225)
276 2h31_A Multifunctional protein 31.2 3.2E+02 0.011 26.1 10.3 140 285-466 264-414 (425)
277 3fwz_A Inner membrane protein 31.1 23 0.00079 27.8 2.1 33 7-44 7-39 (140)
278 3io5_A Recombination and repai 31.1 2E+02 0.0069 26.4 8.6 40 9-48 30-71 (333)
279 3ci9_A Heat shock factor-bindi 30.9 99 0.0034 19.3 4.8 32 430-466 3-34 (48)
280 2l2q_A PTS system, cellobiose- 30.8 71 0.0024 23.8 4.8 37 6-42 3-39 (109)
281 3cg0_A Response regulator rece 30.8 73 0.0025 24.1 5.2 40 111-150 46-92 (140)
282 2bru_C NAD(P) transhydrogenase 30.7 37 0.0013 27.7 3.2 39 8-46 31-72 (186)
283 1y1p_A ARII, aldehyde reductas 30.7 60 0.002 29.6 5.3 36 5-44 9-44 (342)
284 4dzz_A Plasmid partitioning pr 30.4 54 0.0019 27.2 4.6 38 9-46 3-41 (206)
285 3cz5_A Two-component response 30.4 1E+02 0.0035 23.9 6.1 40 111-150 43-89 (153)
286 3nrb_A Formyltetrahydrofolate 30.3 3E+02 0.01 24.6 12.7 104 5-148 86-195 (287)
287 3c1o_A Eugenol synthase; pheny 30.3 50 0.0017 29.9 4.7 35 7-45 4-38 (321)
288 1qkk_A DCTD, C4-dicarboxylate 30.3 69 0.0024 25.0 5.0 42 110-151 38-86 (155)
289 3aek_B Light-independent proto 30.2 38 0.0013 33.6 4.0 35 110-147 340-374 (525)
290 2wm1_A 2-amino-3-carboxymucona 30.2 1.1E+02 0.0036 28.0 7.0 72 238-324 103-177 (336)
291 3n0v_A Formyltetrahydrofolate 30.1 3E+02 0.01 24.6 12.4 105 5-149 88-197 (286)
292 3b6i_A Flavoprotein WRBA; flav 30.1 57 0.002 27.0 4.7 38 7-44 1-40 (198)
293 3hdg_A Uncharacterized protein 30.1 60 0.0021 24.6 4.5 40 109-148 41-87 (137)
294 1mb3_A Cell division response 30.1 67 0.0023 23.6 4.7 39 111-149 37-84 (124)
295 2vqe_B 30S ribosomal protein S 30.1 2E+02 0.0068 25.3 8.1 31 118-148 157-189 (256)
296 3eul_A Possible nitrate/nitrit 30.1 65 0.0022 25.0 4.8 41 109-149 51-98 (152)
297 2hy5_A Putative sulfurtransfer 30.0 77 0.0026 24.4 5.1 37 9-45 2-42 (130)
298 2ark_A Flavodoxin; FMN, struct 29.7 59 0.002 26.9 4.6 41 5-45 2-44 (188)
299 1iow_A DD-ligase, DDLB, D-ALA\ 29.6 67 0.0023 28.8 5.4 39 7-45 2-44 (306)
300 2ph1_A Nucleotide-binding prot 29.6 53 0.0018 28.9 4.5 41 7-47 17-59 (262)
301 1fy2_A Aspartyl dipeptidase; s 29.6 97 0.0033 26.7 6.1 47 273-321 21-67 (229)
302 2xdq_B Light-independent proto 29.5 37 0.0013 33.7 3.7 35 110-147 363-397 (511)
303 2vrn_A Protease I, DR1199; cys 29.4 99 0.0034 25.4 6.0 40 5-45 7-46 (190)
304 2nly_A BH1492 protein, diverge 29.4 2.9E+02 0.0098 24.1 9.1 36 109-146 118-156 (245)
305 3hwr_A 2-dehydropantoate 2-red 29.3 30 0.001 31.7 2.9 33 5-42 17-49 (318)
306 2raf_A Putative dinucleotide-b 29.3 37 0.0013 28.9 3.3 34 6-44 18-51 (209)
307 3ic5_A Putative saccharopine d 29.3 38 0.0013 25.0 3.1 34 6-44 4-38 (118)
308 1ks9_A KPA reductase;, 2-dehyd 29.0 34 0.0012 30.5 3.2 32 8-44 1-32 (291)
309 2jk1_A HUPR, hydrogenase trans 28.9 1.7E+02 0.006 21.9 7.2 48 386-443 71-118 (139)
310 2qx0_A 7,8-dihydro-6-hydroxyme 28.9 82 0.0028 25.5 5.0 28 288-315 3-30 (159)
311 2qzj_A Two-component response 28.9 69 0.0024 24.4 4.7 40 110-149 39-84 (136)
312 3cmw_A Protein RECA, recombina 28.8 2.4E+02 0.0082 32.5 10.4 43 8-50 384-426 (1706)
313 2an1_A Putative kinase; struct 28.8 25 0.00086 31.8 2.3 32 362-395 60-95 (292)
314 3pdu_A 3-hydroxyisobutyrate de 28.8 34 0.0011 30.8 3.1 32 7-43 1-32 (287)
315 4e21_A 6-phosphogluconate dehy 28.8 32 0.0011 32.3 3.0 34 5-43 20-53 (358)
316 1ydh_A AT5G11950; structural g 28.7 1.4E+02 0.0049 25.4 6.9 87 286-393 40-141 (216)
317 2qk4_A Trifunctional purine bi 28.7 2.1E+02 0.0073 27.3 9.1 32 7-43 24-56 (452)
318 1f9y_A HPPK, protein (6-hydrox 28.6 62 0.0021 26.2 4.3 32 288-319 2-34 (158)
319 2i87_A D-alanine-D-alanine lig 28.6 33 0.0011 32.2 3.1 38 6-43 2-43 (364)
320 3lte_A Response regulator; str 28.5 96 0.0033 23.1 5.5 39 110-148 41-87 (132)
321 1p6q_A CHEY2; chemotaxis, sign 28.4 82 0.0028 23.4 5.0 40 110-149 42-90 (129)
322 2pn1_A Carbamoylphosphate synt 28.4 61 0.0021 29.6 4.9 34 5-44 2-37 (331)
323 3ea0_A ATPase, para family; al 28.3 48 0.0017 28.6 4.0 40 7-46 3-45 (245)
324 4h1h_A LMO1638 protein; MCCF-l 28.3 71 0.0024 29.4 5.3 27 300-326 63-89 (327)
325 1yt5_A Inorganic polyphosphate 28.3 20 0.00067 31.9 1.4 28 365-394 41-71 (258)
326 3goc_A Endonuclease V; alpha-b 28.2 99 0.0034 26.8 5.7 30 118-147 106-142 (237)
327 2gas_A Isoflavone reductase; N 28.1 48 0.0016 29.8 4.1 35 7-45 2-36 (307)
328 3n53_A Response regulator rece 28.1 56 0.0019 24.9 4.0 40 110-149 37-85 (140)
329 3rht_A (gatase1)-like protein; 28.0 57 0.0019 29.0 4.3 39 6-48 3-43 (259)
330 1pzg_A LDH, lactate dehydrogen 27.9 27 0.00091 32.4 2.3 35 5-44 7-42 (331)
331 1jbe_A Chemotaxis protein CHEY 27.9 1.1E+02 0.0037 22.6 5.7 40 110-149 40-88 (128)
332 3l4b_C TRKA K+ channel protien 27.9 21 0.00071 30.6 1.5 32 8-44 1-32 (218)
333 3nbm_A PTS system, lactose-spe 27.8 87 0.003 23.4 4.7 38 5-42 4-41 (108)
334 3f67_A Putative dienelactone h 27.8 85 0.0029 26.4 5.5 36 8-43 32-67 (241)
335 3cx3_A Lipoprotein; zinc-bindi 27.8 1.2E+02 0.0041 27.1 6.6 38 110-147 217-256 (284)
336 3s40_A Diacylglycerol kinase; 27.7 68 0.0023 29.1 5.0 82 286-395 10-97 (304)
337 3h1g_A Chemotaxis protein CHEY 27.7 1.2E+02 0.0041 22.5 5.9 40 109-148 41-89 (129)
338 2qr3_A Two-component system re 27.7 85 0.0029 23.7 5.1 41 111-151 39-91 (140)
339 1wcv_1 SOJ, segregation protei 27.6 39 0.0013 29.7 3.3 40 7-46 5-46 (257)
340 3g79_A NDP-N-acetyl-D-galactos 27.6 55 0.0019 32.0 4.5 36 5-45 16-53 (478)
341 1u94_A RECA protein, recombina 27.6 1.6E+02 0.0055 27.4 7.6 40 9-48 65-104 (356)
342 3mjf_A Phosphoribosylamine--gl 27.5 35 0.0012 32.9 3.1 26 6-36 2-27 (431)
343 3lrx_A Putative hydrogenase; a 27.3 48 0.0016 26.7 3.5 36 7-45 23-58 (158)
344 2a33_A Hypothetical protein; s 27.2 1.4E+02 0.0047 25.6 6.5 103 274-395 35-147 (215)
345 2rdm_A Response regulator rece 27.2 1.2E+02 0.004 22.5 5.8 40 110-149 40-88 (132)
346 3k9g_A PF-32 protein; ssgcid, 27.2 59 0.002 28.6 4.4 40 6-46 25-66 (267)
347 3lyu_A Putative hydrogenase; t 27.2 62 0.0021 25.5 4.1 33 7-41 18-50 (142)
348 3jte_A Response regulator rece 27.2 1E+02 0.0035 23.4 5.5 42 109-150 37-87 (143)
349 3dff_A Teicoplanin pseudoaglyc 27.0 58 0.002 29.1 4.3 43 1-43 1-43 (273)
350 3cfy_A Putative LUXO repressor 27.0 85 0.0029 23.9 4.9 37 113-149 42-85 (137)
351 2b69_A UDP-glucuronate decarbo 27.0 59 0.002 29.8 4.6 36 5-44 25-60 (343)
352 3rqi_A Response regulator prot 27.0 62 0.0021 26.4 4.3 41 110-150 42-89 (184)
353 3hdv_A Response regulator; PSI 26.9 91 0.0031 23.4 5.1 39 1-43 1-39 (136)
354 2hmt_A YUAA protein; RCK, KTN, 26.8 31 0.0011 26.7 2.2 34 6-44 5-38 (144)
355 4dgk_A Phytoene dehydrogenase; 26.6 24 0.00083 34.6 1.8 32 7-43 1-32 (501)
356 1yb4_A Tartronic semialdehyde 26.3 41 0.0014 30.2 3.3 32 6-42 2-33 (295)
357 3qsg_A NAD-binding phosphogluc 26.3 29 0.00098 31.8 2.2 34 5-43 22-56 (312)
358 3c97_A Signal transduction his 26.2 1.3E+02 0.0045 22.7 5.9 28 111-138 46-75 (140)
359 2c5m_A CTP synthase; cytidine 26.2 47 0.0016 29.3 3.3 43 6-48 21-66 (294)
360 3ip0_A 2-amino-4-hydroxy-6-hyd 26.0 74 0.0025 25.8 4.3 28 288-315 2-29 (158)
361 2j48_A Two-component sensor ki 25.9 97 0.0033 22.2 5.0 40 110-149 36-84 (119)
362 3c24_A Putative oxidoreductase 25.9 45 0.0015 29.9 3.4 32 7-43 11-43 (286)
363 2qv0_A Protein MRKE; structura 25.8 1.2E+02 0.0041 23.0 5.7 30 110-139 46-77 (143)
364 1byi_A Dethiobiotin synthase; 25.8 77 0.0026 26.8 4.8 33 9-41 3-36 (224)
365 2b4a_A BH3024; flavodoxin-like 25.7 91 0.0031 23.5 4.9 39 109-147 49-95 (138)
366 3qbc_A 2-amino-4-hydroxy-6-hyd 25.7 78 0.0027 25.7 4.4 32 288-319 6-38 (161)
367 1z82_A Glycerol-3-phosphate de 25.6 38 0.0013 31.3 2.9 33 7-44 14-46 (335)
368 2pju_A Propionate catabolism o 25.5 1.1E+02 0.0038 26.4 5.6 72 360-441 56-150 (225)
369 3e5n_A D-alanine-D-alanine lig 25.5 49 0.0017 31.4 3.7 41 4-44 19-63 (386)
370 2etv_A Iron(III) ABC transport 25.4 53 0.0018 30.5 3.9 31 117-147 94-125 (346)
371 2qyt_A 2-dehydropantoate 2-red 25.4 28 0.00096 31.7 1.9 33 6-43 7-45 (317)
372 1cbk_A Protein (7,8-dihydro-6- 25.4 77 0.0026 25.7 4.3 28 288-315 3-30 (160)
373 4g65_A TRK system potassium up 25.3 19 0.00065 35.2 0.8 34 6-44 2-35 (461)
374 2gdz_A NAD+-dependent 15-hydro 25.1 1.1E+02 0.0039 26.6 6.0 39 1-43 1-39 (267)
375 1kgs_A DRRD, DNA binding respo 25.0 1.4E+02 0.0048 24.9 6.4 41 111-151 38-85 (225)
376 2z1m_A GDP-D-mannose dehydrata 24.8 64 0.0022 29.4 4.4 34 7-44 3-36 (345)
377 1pq4_A Periplasmic binding pro 24.8 2.9E+02 0.01 24.7 8.7 41 109-149 227-269 (291)
378 2x4g_A Nucleoside-diphosphate- 24.8 71 0.0024 29.1 4.7 35 6-44 12-46 (342)
379 3s2u_A UDP-N-acetylglucosamine 24.7 87 0.003 29.2 5.3 37 287-325 4-40 (365)
380 3f2v_A General stress protein 24.7 58 0.002 27.3 3.6 36 7-42 1-37 (192)
381 3dfi_A Pseudoaglycone deacetyl 24.6 72 0.0025 28.4 4.4 43 1-43 1-43 (270)
382 3bul_A Methionine synthase; tr 24.6 72 0.0024 32.0 4.8 41 6-46 97-137 (579)
383 1k68_A Phytochrome response re 24.4 1.3E+02 0.0046 22.4 5.7 33 118-150 54-95 (140)
384 3lzw_A Ferredoxin--NADP reduct 24.2 25 0.00085 32.0 1.3 36 5-45 5-40 (332)
385 1dhr_A Dihydropteridine reduct 24.1 1E+02 0.0034 26.5 5.3 40 1-44 1-40 (241)
386 2z04_A Phosphoribosylaminoimid 24.1 78 0.0027 29.4 4.9 34 7-45 1-34 (365)
387 3sr3_A Microcin immunity prote 24.1 92 0.0031 28.8 5.2 72 300-395 64-137 (336)
388 1xjc_A MOBB protein homolog; s 24.1 1.3E+02 0.0043 24.6 5.5 39 7-45 4-42 (169)
389 2c20_A UDP-glucose 4-epimerase 24.0 45 0.0015 30.4 3.1 34 7-44 1-34 (330)
390 1ulz_A Pyruvate carboxylase N- 23.9 1.6E+02 0.0056 28.1 7.3 32 8-44 3-34 (451)
391 1ihu_A Arsenical pump-driving 23.9 70 0.0024 32.2 4.7 48 5-53 5-53 (589)
392 2r25_B Osmosensing histidine p 23.7 1.6E+02 0.0056 22.0 6.0 32 118-149 51-90 (133)
393 3ruf_A WBGU; rossmann fold, UD 23.6 64 0.0022 29.6 4.1 36 6-45 24-59 (351)
394 2qv7_A Diacylglycerol kinase D 23.5 76 0.0026 29.3 4.5 81 288-395 28-114 (337)
395 3gt7_A Sensor protein; structu 23.4 1.1E+02 0.0039 23.7 5.2 39 1-43 1-39 (154)
396 1zi8_A Carboxymethylenebutenol 23.3 1.1E+02 0.0036 25.6 5.3 36 8-43 28-63 (236)
397 3slg_A PBGP3 protein; structur 23.3 62 0.0021 30.0 4.0 36 5-44 22-58 (372)
398 3kcn_A Adenylate cyclase homol 23.3 2.1E+02 0.0073 21.8 6.8 48 385-443 74-122 (151)
399 3h5i_A Response regulator/sens 23.2 1.5E+02 0.0051 22.4 5.8 37 112-148 42-86 (140)
400 3hbl_A Pyruvate carboxylase; T 23.2 3.2E+02 0.011 30.1 9.9 34 7-45 4-37 (1150)
401 2xws_A Sirohydrochlorin cobalt 23.1 96 0.0033 23.8 4.5 39 286-324 4-44 (133)
402 3i12_A D-alanine-D-alanine lig 23.1 58 0.002 30.5 3.7 39 6-44 2-44 (364)
403 1ys7_A Transcriptional regulat 23.0 1.3E+02 0.0044 25.4 5.8 37 112-148 44-87 (233)
404 2q37_A OHCU decarboxylase; 2-O 22.9 3E+02 0.01 22.7 7.5 55 399-462 117-171 (181)
405 1e6u_A GDP-fucose synthetase; 22.9 61 0.0021 29.3 3.8 33 7-43 3-35 (321)
406 3ax6_A Phosphoribosylaminoimid 22.9 1E+02 0.0035 28.7 5.5 34 7-45 1-34 (380)
407 3q9s_A DNA-binding response re 22.8 1.2E+02 0.0041 26.2 5.6 42 109-150 71-118 (249)
408 1mio_A Nitrogenase molybdenum 22.8 47 0.0016 33.1 3.0 35 109-146 446-480 (533)
409 3h7a_A Short chain dehydrogena 22.8 2.4E+02 0.0082 24.3 7.6 33 9-44 8-40 (252)
410 3r6d_A NAD-dependent epimerase 22.7 88 0.003 26.4 4.6 35 7-44 4-39 (221)
411 4fbl_A LIPS lipolytic enzyme; 22.7 56 0.0019 28.9 3.4 33 11-43 54-86 (281)
412 3ioy_A Short-chain dehydrogena 22.7 1.1E+02 0.0036 27.9 5.4 33 9-44 9-41 (319)
413 3d1l_A Putative NADP oxidoredu 22.7 32 0.0011 30.4 1.7 37 1-42 4-41 (266)
414 3e1t_A Halogenase; flavoprotei 22.7 42 0.0014 33.2 2.7 40 1-45 1-40 (512)
415 3cnb_A DNA-binding response re 22.6 1E+02 0.0035 23.2 4.7 40 110-149 45-93 (143)
416 2qsj_A DNA-binding response re 22.6 89 0.0031 24.2 4.3 41 109-149 39-87 (154)
417 2q3e_A UDP-glucose 6-dehydroge 22.6 63 0.0021 31.5 3.9 34 5-43 3-38 (467)
418 2pk3_A GDP-6-deoxy-D-LYXO-4-he 22.6 80 0.0027 28.5 4.5 36 5-44 10-45 (321)
419 1wrd_A TOM1, target of MYB pro 22.5 82 0.0028 23.3 3.6 30 428-463 2-31 (103)
420 1zl0_A Hypothetical protein PA 22.5 1.4E+02 0.0048 27.2 6.0 74 299-396 64-139 (311)
421 1u0t_A Inorganic polyphosphate 22.3 75 0.0026 28.9 4.2 37 7-43 4-41 (307)
422 3psh_A Protein HI_1472; substr 22.3 84 0.0029 28.6 4.6 33 116-148 81-114 (326)
423 3fet_A Electron transfer flavo 22.2 1E+02 0.0036 25.0 4.6 38 109-148 61-101 (166)
424 2rjn_A Response regulator rece 22.2 45 0.0015 26.1 2.4 63 386-462 78-141 (154)
425 2bon_A Lipid kinase; DAG kinas 22.1 1.2E+02 0.0042 27.7 5.7 81 285-395 30-118 (332)
426 1i3c_A Response regulator RCP1 22.1 1.7E+02 0.0058 22.4 5.9 32 118-149 60-100 (149)
427 1k66_A Phytochrome response re 22.0 1.6E+02 0.0056 22.2 5.8 32 118-149 61-101 (149)
428 2pd6_A Estradiol 17-beta-dehyd 22.0 1.5E+02 0.0052 25.6 6.1 40 1-44 1-40 (264)
429 1sb8_A WBPP; epimerase, 4-epim 22.0 73 0.0025 29.3 4.2 36 5-44 25-60 (352)
430 4g6h_A Rotenone-insensitive NA 22.0 38 0.0013 33.4 2.2 36 5-45 40-75 (502)
431 2qvg_A Two component response 21.9 1.4E+02 0.0049 22.4 5.4 32 118-149 58-98 (143)
432 1uan_A Hypothetical protein TT 21.9 89 0.003 26.9 4.4 20 108-127 84-103 (227)
433 2fb6_A Conserved hypothetical 21.7 72 0.0025 24.2 3.3 37 8-44 8-48 (117)
434 3bfv_A CAPA1, CAPB2, membrane 21.5 1.3E+02 0.0045 26.6 5.6 45 6-50 80-126 (271)
435 4ezb_A Uncharacterized conserv 21.5 51 0.0017 30.2 2.8 33 7-44 24-57 (317)
436 4fu0_A D-alanine--D-alanine li 21.5 65 0.0022 30.0 3.7 38 5-42 1-42 (357)
437 2ixd_A LMBE-related protein; h 21.4 78 0.0027 27.7 3.9 36 7-42 3-38 (242)
438 3t8y_A CHEB, chemotaxis respon 21.3 1.3E+02 0.0044 23.8 5.1 39 110-148 62-106 (164)
439 3r0j_A Possible two component 21.2 1.2E+02 0.0041 26.1 5.2 42 109-150 57-105 (250)
440 3ksu_A 3-oxoacyl-acyl carrier 21.2 97 0.0033 27.2 4.6 32 9-43 12-43 (262)
441 3f5d_A Protein YDEA; unknow pr 21.2 87 0.003 26.5 4.1 39 6-45 2-41 (206)
442 2vns_A Metalloreductase steap3 21.1 51 0.0018 28.1 2.6 33 6-43 27-59 (215)
443 1t5b_A Acyl carrier protein ph 21.1 87 0.003 25.9 4.1 37 7-43 1-43 (201)
444 2oqr_A Sensory transduction pr 20.9 1.2E+02 0.0042 25.4 5.2 41 112-152 41-87 (230)
445 3s40_A Diacylglycerol kinase; 20.8 1.2E+02 0.0041 27.4 5.2 42 5-46 6-50 (304)
446 3dtt_A NADP oxidoreductase; st 20.8 61 0.0021 28.2 3.1 35 5-44 17-51 (245)
447 3pef_A 6-phosphogluconate dehy 20.8 56 0.0019 29.2 3.0 31 8-43 2-32 (287)
448 1cyd_A Carbonyl reductase; sho 20.7 1.5E+02 0.0053 25.2 5.8 40 1-44 1-40 (244)
449 3l77_A Short-chain alcohol deh 20.7 94 0.0032 26.5 4.4 34 8-44 2-35 (235)
450 1pjq_A CYSG, siroheme synthase 20.6 4.1E+02 0.014 25.5 9.3 146 285-463 12-167 (457)
451 3ga2_A Endonuclease V; alpha-b 20.6 1.3E+02 0.0043 26.4 4.9 30 118-147 108-144 (246)
452 2xxa_A Signal recognition part 20.5 1.6E+02 0.0053 28.4 6.2 42 8-49 101-143 (433)
453 1oi4_A Hypothetical protein YH 20.5 2E+02 0.0068 23.7 6.2 40 5-45 21-60 (193)
454 3to5_A CHEY homolog; alpha(5)b 20.4 1.2E+02 0.004 23.5 4.4 106 300-443 21-132 (134)
455 3lk7_A UDP-N-acetylmuramoylala 20.4 1E+02 0.0035 29.7 5.0 34 5-43 7-40 (451)
456 3ai3_A NADPH-sorbose reductase 20.4 1.7E+02 0.0058 25.4 6.1 40 1-44 1-40 (263)
457 1nff_A Putative oxidoreductase 20.4 1.6E+02 0.0055 25.6 5.9 40 1-44 1-40 (260)
458 2wtm_A EST1E; hydrolase; 1.60A 20.4 1.5E+02 0.005 25.3 5.6 36 8-43 27-64 (251)
459 1qyc_A Phenylcoumaran benzylic 20.3 79 0.0027 28.3 3.9 35 7-45 4-38 (308)
460 2pnf_A 3-oxoacyl-[acyl-carrier 20.3 1.4E+02 0.0048 25.5 5.5 40 1-44 1-40 (248)
461 1u7z_A Coenzyme A biosynthesis 20.2 76 0.0026 27.4 3.5 23 23-45 36-58 (226)
462 3hly_A Flavodoxin-like domain; 20.2 1.4E+02 0.0047 23.9 5.0 37 8-44 1-38 (161)
463 3ego_A Probable 2-dehydropanto 20.2 47 0.0016 30.2 2.3 32 8-45 3-34 (307)
464 4hn9_A Iron complex transport 20.2 70 0.0024 29.4 3.6 36 113-148 110-145 (335)
465 2c5a_A GDP-mannose-3', 5'-epim 20.1 1E+02 0.0036 28.7 4.9 35 6-44 28-62 (379)
466 3rot_A ABC sugar transporter, 20.1 4.3E+02 0.015 23.0 10.7 32 117-148 59-94 (297)
467 3sxp_A ADP-L-glycero-D-mannohe 20.1 1.5E+02 0.0052 27.2 6.0 37 4-44 7-45 (362)
468 1lld_A L-lactate dehydrogenase 20.1 45 0.0015 30.4 2.2 36 4-44 4-41 (319)
469 1jay_A Coenzyme F420H2:NADP+ o 20.0 63 0.0022 27.2 3.0 32 8-43 1-32 (212)
470 2d1p_A TUSD, hypothetical UPF0 20.0 1.9E+02 0.0065 22.7 5.6 38 7-44 12-53 (140)
471 3tsa_A SPNG, NDP-rhamnosyltran 20.0 1E+02 0.0036 28.6 4.8 29 365-395 114-143 (391)
472 1js1_X Transcarbamylase; alpha 20.0 1.2E+02 0.004 27.9 4.9 10 119-128 229-238 (324)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.3e-65 Score=510.15 Aligned_cols=433 Identities=29% Similarity=0.470 Sum_probs=340.7
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCc
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRG--VKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWE 83 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 83 (487)
+++||+++|+|++||++||+.||+.|+++| +.|||++++.+...+.+... ..+.+++|+.+| ++++++.+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCcc
Confidence 368999999999999999999999999999 99999999754433322210 012368999887 35666554
Q ss_pred ccccchhhhhHHHHHHHHHHH-HhhhHHHHHHHhh--CCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHHHh
Q 046605 84 NLDAITNEVNRELIVKFYMAT-TKLQKPLEQLLQE--HKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKCL 160 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 160 (487)
...+ .. ..+..+.... ..+.+.+.+++++ .++|+||+|.++.|+..+|+++|||++.+++++++.+..+.+.
T Consensus 84 ~~~~-~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~ 158 (454)
T 3hbf_A 84 SSGN-PR----EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYT 158 (454)
T ss_dssp CCSC-TT----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTH
T ss_pred ccCC-hH----HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhh
Confidence 4332 11 2233333333 3344555555554 5899999999999999999999999999999999998887775
Q ss_pred hhhcCC-C--CCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHH
Q 046605 161 ALYEPH-K--KVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADH 237 (487)
Q Consensus 161 ~~~~~~-~--~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~ 237 (487)
...... . .........++|+++. +..++++.+... .....+..+..+.......+..+++||+++||++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~ 234 (454)
T 3hbf_A 159 DLIREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENE 234 (454)
T ss_dssp HHHHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHH
T ss_pred HHHHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHH
Confidence 432211 0 0011122234888875 677888877332 22234566666677777888999999999999999888
Q ss_pred HHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCc
Q 046605 238 YRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQN 317 (487)
Q Consensus 238 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 317 (487)
+++.+ +++++|||++..... .....+.++.+||+.++++++|||||||+...+.+++.+++.+|++.+++
T Consensus 235 ~~~~~-~~v~~vGPl~~~~~~---------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~ 304 (454)
T 3hbf_A 235 LNSKF-KLLLNVGPFNLTTPQ---------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFP 304 (454)
T ss_dssp HHTTS-SCEEECCCHHHHSCC---------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCC
T ss_pred HHhcC-CCEEEECCccccccc---------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCe
Confidence 87655 799999999764321 11223578999999988899999999999998899999999999999999
Q ss_pred EEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEeccCccc
Q 046605 318 FIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYA 397 (487)
Q Consensus 318 ~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 397 (487)
|||+++.... . .+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.
T Consensus 305 flw~~~~~~~-------~-~lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~ 375 (454)
T 3hbf_A 305 FIWSFRGDPK-------E-KLPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFG 375 (454)
T ss_dssp EEEECCSCHH-------H-HSCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred EEEEeCCcch-------h-cCCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccc
Confidence 9999987532 1 1777776543 47899999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHH-hhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 046605 398 EQFYNEKIVNEV-LKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSSNLN 476 (487)
Q Consensus 398 DQ~~~a~rv~~~-~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~ 476 (487)
||+.||++++ + +|+|+.+... .+++++|.++|+++|+++..++||+||+++++++++|+++||||..+++
T Consensus 376 DQ~~Na~~v~-~~~g~Gv~l~~~--------~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 446 (454)
T 3hbf_A 376 DQGLNTILTE-SVLEIGVGVDNG--------VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFT 446 (454)
T ss_dssp THHHHHHHHH-TTSCSEEECGGG--------SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred cHHHHHHHHH-HhhCeeEEecCC--------CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 9999999995 7 6999999875 7999999999999998433458999999999999999999999999999
Q ss_pred HHHHHHh
Q 046605 477 SLIEDLS 483 (487)
Q Consensus 477 ~~~~~l~ 483 (487)
+||+.+.
T Consensus 447 ~~v~~i~ 453 (454)
T 3hbf_A 447 TLIQIVT 453 (454)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999885
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=7.3e-61 Score=484.38 Aligned_cols=446 Identities=27% Similarity=0.500 Sum_probs=324.4
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCC--CccchhhhhhhhhccCcceeEEEeeCCCccCCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITTPG--NAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEG 81 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~ 81 (487)
.+++||+++|+|++||++|++.||++|++| ||+|||++++. +...+++... ..+.+++|+.++... .++
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~- 75 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTD- 75 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTT-
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCC-
Confidence 456899999999999999999999999998 99999999987 4455543210 002378898887431 111
Q ss_pred CcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhh----CCC-CEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHH
Q 046605 82 WENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQE----HKP-DCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCA 156 (487)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~p-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 156 (487)
... .. .....+......+...+.+++++ .++ |+||+|.++.|+..+|+.+|||++.+++++++.+..
T Consensus 76 ~~~---~~-----~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 147 (480)
T 2vch_A 76 LSS---ST-----RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 147 (480)
T ss_dssp SCT---TC-----CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred CCC---ch-----hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHH
Confidence 100 00 11122233344555666666665 478 999999998899999999999999999998887766
Q ss_pred HHHhhhhcC--CCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHH
Q 046605 157 IKCLALYEP--HKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAY 234 (487)
Q Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~ 234 (487)
+.+++.... .........+..+|++++ +...+++... ............+....+.+..++++|++.+++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~ 222 (480)
T 2vch_A 148 FLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPA--QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNA 222 (480)
T ss_dssp HHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGG--SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHH
T ss_pred HHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhh--hcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHH
Confidence 655432110 000000012234566654 3334444331 111112233333334455667788899999999887
Q ss_pred HHHHHHHh--CCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHH
Q 046605 235 ADHYRKAL--GRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLE 312 (487)
Q Consensus 235 ~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~ 312 (487)
...+..+. .+++++|||++...... ..+..+.++.+||+.++++++|||||||+...+.+++.+++++|+
T Consensus 223 ~~~l~~~~~~~~~v~~vGpl~~~~~~~--------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~ 294 (480)
T 2vch_A 223 IKALQEPGLDKPPVYPVGPLVNIGKQE--------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294 (480)
T ss_dssp HHHHHSCCTTCCCEEECCCCCCCSCSC--------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCcEEEEeccccccccc--------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHH
Confidence 77665421 26899999997642110 001245789999999878899999999999888999999999999
Q ss_pred hcCCcEEEEecCCCCCC--------CcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHh
Q 046605 313 ASGQNFIWVVRKNKNNG--------GEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGV 384 (487)
Q Consensus 313 ~~~~~~i~~~~~~~~~~--------~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal 384 (487)
+++++|||+++.....+ +++.+...+|+++.++.+..++++.+|+||.+||+|+++++||||||+||++||+
T Consensus 295 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal 374 (480)
T 2vch_A 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESV 374 (480)
T ss_dssp HTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred hcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHH
Confidence 99999999998653100 0012222388888877776667777799999999999999999999999999999
Q ss_pred hcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 046605 385 TAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRA 464 (487)
Q Consensus 385 ~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a 464 (487)
++|||+|++|++.||+.||+++++++|+|+.+... +++.+++++|.++|+++|+++.+++||+||+++++++++|
T Consensus 375 ~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~-----~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a 449 (480)
T 2vch_A 375 VSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG-----DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRV 449 (480)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC-----TTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEeccccccchHHHHHHHHHhCeEEEeecc-----cCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999964599999999653 1236899999999999998666789999999999999999
Q ss_pred HhcCCCcHHHHHHHHHHHhh
Q 046605 465 VENGGSSSSNLNSLIEDLSL 484 (487)
Q Consensus 465 ~~~~g~~~~~~~~~~~~l~~ 484 (487)
+++||++..++++||+.++.
T Consensus 450 ~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 450 LKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp TSTTSHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999864
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.1e-61 Score=487.28 Aligned_cols=458 Identities=27% Similarity=0.491 Sum_probs=317.4
Q ss_pred CCCC-CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccC-cceeEEEeeCCCccCCC
Q 046605 1 MASG-ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELG-IELDVKIIKFPSAEAGL 78 (487)
Q Consensus 1 m~~~-~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g-~~i~~~~i~~~~~~~~~ 78 (487)
|+.. ++++||+|+|+|++||++|++.||++|++|||+|||++++.+...+.+........| .+++|+.++. ++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-----~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-----GL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC-----CC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-----CC
Confidence 5543 556899999999999999999999999999999999999876544433211100011 2688888862 33
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhh-------CCCCEEEeCCCCcchHHHHHHhCCCeEEEechhH
Q 046605 79 PEGWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQE-------HKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSF 151 (487)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~ 151 (487)
+............ ..++..+ ...+...+++++++ .++|+||+|.++.|+..+|+.+|||+|.++++++
T Consensus 76 p~~~~~~~~~~~~--~~~~~~~---~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 150 (482)
T 2pq6_A 76 TPMEGDGDVSQDV--PTLCQSV---RKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSA 150 (482)
T ss_dssp C---------CCH--HHHHHHH---TTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCH
T ss_pred CCcccccCcchhH--HHHHHHH---HHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccH
Confidence 3310000000110 1222211 13334444555542 5899999999999999999999999999999988
Q ss_pred HHHHHHHHhhhhcCCCCCCCCC-----------CccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCcc
Q 046605 152 FSLCAIKCLALYEPHKKVSSDS-----------EPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSY 220 (487)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (487)
+....+.+++......+.+... ....+|+++. +...+++.+.........+..+............
T Consensus 151 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (482)
T 2pq6_A 151 CSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDT 227 (482)
T ss_dssp HHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCC
Confidence 7766554443221111111110 1112445442 3333444432111111223344444455566788
Q ss_pred EEEEcchhhhcHHHHHHHHHHhCCceEEeccccCC-CcCchhhhhhC--CCCCCChhhHhhhhcCCCCCcEEEEeccCcc
Q 046605 221 GVVVNSFYELEHAYADHYRKALGRRAWHIGPVSLC-NRNFEDKALRG--KQASVDEQECLKWLNSKQPNSVVYICFGSVA 297 (487)
Q Consensus 221 ~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~ 297 (487)
.+++|++++||+++++++++.+ +++++|||++.. ........... ...+..+.++.+||+.++++++|||||||+.
T Consensus 228 ~vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~ 306 (482)
T 2pq6_A 228 TILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTT 306 (482)
T ss_dssp CEEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSS
T ss_pred EEEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcc
Confidence 8999999999999888888776 789999999753 11100000000 0111234578999999878899999999998
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCc
Q 046605 298 NFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGW 377 (487)
Q Consensus 298 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~ 377 (487)
..+.+++.+++.+|++.+++|||+++..... .... .+|+++.++. ++|+++++|+||.++|+|+++++||||||+
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~---~~~~-~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~ 381 (482)
T 2pq6_A 307 VMTPEQLLEFAWGLANCKKSFLWIIRPDLVI---GGSV-IFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGW 381 (482)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECCGGGST---TTGG-GSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCH
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEEcCCccc---cccc-cCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCc
Confidence 8888889999999999999999999864211 0001 1677776544 578999999999999999999999999999
Q ss_pred hhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 046605 378 NSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAF 457 (487)
Q Consensus 378 gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 457 (487)
||++||+++|||+|++|++.||+.||+++++++|+|+.+. . .+++++|.++|+++|+++..++||+||+++
T Consensus 382 ~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~--------~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l 452 (482)
T 2pq6_A 382 NSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T--------NVKREELAKLINEVIAGDKGKKMKQKAMEL 452 (482)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S--------SCCHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred chHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C--------CCCHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999943799999997 5 699999999999999822122799999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHhhcc
Q 046605 458 GEMAKRAVENGGSSSSNLNSLIEDLSLRR 486 (487)
Q Consensus 458 ~~~~~~a~~~~g~~~~~~~~~~~~l~~~~ 486 (487)
++.+++|+++||||..++++||+.++.++
T Consensus 453 ~~~~~~a~~~gGss~~~l~~~v~~~~~~~ 481 (482)
T 2pq6_A 453 KKKAEENTRPGGCSYMNLNKVIKDVLLKQ 481 (482)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999987653
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.2e-59 Score=470.67 Aligned_cols=439 Identities=28% Similarity=0.444 Sum_probs=324.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCcc-chhhhhhhhhccCcceeEEEeeCCCccCCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAP-HLSRSIQKASELGIELDVKIIKFPSAEAGLPEG 81 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~-~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~ 81 (487)
++++||+++|+|++||++|++.||+.|++| ||+|||++++.+.+ .+.+........+.+++|+.+|... ++.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~- 81 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE----PPP- 81 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC----CCC-
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC----CCc-
Confidence 456899999999999999999999999999 99999999987642 2222211111123478999887421 221
Q ss_pred CcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhh---CCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHH
Q 046605 82 WENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQE---HKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIK 158 (487)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 158 (487)
.+. ... .... +..........+++++++ .+||+||+|.++.|+..+|+.+|||++.+++++++.+..+.
T Consensus 82 ~~~---~~~---~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 153 (463)
T 2acv_A 82 QEL---LKS---PEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLML 153 (463)
T ss_dssp GGG---GGS---HHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHH
T ss_pred ccc---cCC---ccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHH
Confidence 110 111 1222 344445566677777776 79999999999889999999999999999999988877766
Q ss_pred HhhhhcCCCCCCCCCC---ccccCCC-CCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHH
Q 046605 159 CLALYEPHKKVSSDSE---PFVMPNL-PGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAY 234 (487)
Q Consensus 159 ~~~~~~~~~~~~~~~~---~~~~P~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~ 234 (487)
+++.......+..... ...+|++ +. +...+++... ..... +.....+..........+++|++++|+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~ 227 (463)
T 2acv_A 154 SLKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDAC--FNKDG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSS 227 (463)
T ss_dssp HGGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHH--HCTTT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHH
T ss_pred HHHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhh--cCCch-HHHHHHHHHHhcccCCEEEECCHHHHhHHH
Confidence 6554321111111122 3456777 43 3333343221 11111 222333334445667788999999999988
Q ss_pred HHHHHHHh--CCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcc-cCCHHHHHHHHHHH
Q 046605 235 ADHYRKAL--GRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVA-NFTSAQLMEIAMGL 311 (487)
Q Consensus 235 ~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~ 311 (487)
.+.+.... .+++++|||+......... ...+.++.++.+|++..+++++|||||||+. ..+.+++.+++++|
T Consensus 228 ~~~l~~~~~p~~~v~~vGpl~~~~~~~~~-----~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l 302 (463)
T 2acv_A 228 IDALYDHDEKIPPIYAVGPLLDLKGQPNP-----KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGL 302 (463)
T ss_dssp HHHHHHHCTTSCCEEECCCCCCSSCCCBT-----TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHH
T ss_pred HHHHHhccccCCcEEEeCCCccccccccc-----ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHH
Confidence 87777655 6789999999764310000 0001235789999999888899999999999 77888899999999
Q ss_pred HhcCCcEEEEecCCCCCCCcccccccCchhHHHHhc-CCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcE
Q 046605 312 EASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRME-GKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPL 390 (487)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~ 390 (487)
++.+++|||+++.+.. .+|+++.++.. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+
T Consensus 303 ~~~~~~~l~~~~~~~~---------~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~ 373 (463)
T 2acv_A 303 KHSGVRFLWSNSAEKK---------VFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPI 373 (463)
T ss_dssp HHHTCEEEEECCCCGG---------GSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCE
T ss_pred HhCCCcEEEEECCCcc---------cCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCe
Confidence 9999999999987411 16666655431 4688999999999999999999999999999999999999999
Q ss_pred eccCccccchhhHHHHHHHhhceEee-cccccccccCC--ccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 391 VTWPVYAEQFYNEKIVNEVLKIGIGV-GIQKWCRIVGD--FVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 391 l~~P~~~DQ~~~a~rv~~~~G~G~~l-~~~~~~~~~~~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
|++|++.||+.||+++++++|+|+.+ ... +++ .+++++|.++|+++|+ + +++||+||+++++.+++|+++
T Consensus 374 i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~-----~~~~~~~~~~~l~~ai~~ll~-~-~~~~r~~a~~l~~~~~~a~~~ 446 (463)
T 2acv_A 374 LTWPIYAEQQLNAFRLVKEWGVGLGLRVDY-----RKGSDVVAAEEIEKGLKDLMD-K-DSIVHKKVQEMKEMSRNAVVD 446 (463)
T ss_dssp EECCCSTTHHHHHHHHHHTSCCEEESCSSC-----CTTCCCCCHHHHHHHHHHHTC-T-TCTHHHHHHHHHHHHHHHTST
T ss_pred eeccchhhhHHHHHHHHHHcCeEEEEeccc-----CCCCccccHHHHHHHHHHHHh-c-cHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999942599999999 311 012 5899999999999996 1 368999999999999999999
Q ss_pred CCCcHHHHHHHHHHHh
Q 046605 468 GGSSSSNLNSLIEDLS 483 (487)
Q Consensus 468 ~g~~~~~~~~~~~~l~ 483 (487)
||||..++++||+.++
T Consensus 447 gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 447 GGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhc
Confidence 9999999999999985
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-59 Score=470.54 Aligned_cols=441 Identities=27% Similarity=0.452 Sum_probs=315.5
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCe--EEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVK--ASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGL 78 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~ 78 (487)
|++.++++||+++|+|++||++|++.||+.|++|||. |||++++.....+.+.... ....+++|+.++. ++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~-----gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISD-----GV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCC-----CC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCC-----CC
Confidence 7777788999999999999999999999999999765 5788876432222221000 0023688888752 34
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHH-HhhhHHHHHHHhh--CCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHH
Q 046605 79 PEGWENLDAITNEVNRELIVKFYMAT-TKLQKPLEQLLQE--HKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLC 155 (487)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 155 (487)
+++.+... .. ...+..+.... ..+.+.+.+++++ .+||+||+|.++.|+..+|+.+|||+|.++++++..+.
T Consensus 74 p~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 148 (456)
T 2c1x_A 74 PEGYVFAG-RP----QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLS 148 (456)
T ss_dssp CTTCCCCC-CT----THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHH
T ss_pred CCcccccC-Ch----HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHH
Confidence 43322111 11 12233333332 2233334444433 69999999999999999999999999999999877665
Q ss_pred HHHHhhhh---cCCCC-CCC-CCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhh
Q 046605 156 AIKCLALY---EPHKK-VSS-DSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYEL 230 (487)
Q Consensus 156 ~~~~~~~~---~~~~~-~~~-~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 230 (487)
.+.+.... ..... ... .....++|+++. +..++++.....-.....+..+..+..........+++|++++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~l 225 (456)
T 2c1x_A 149 THVYIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEEL 225 (456)
T ss_dssp HHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGG
T ss_pred HHhhhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHH
Confidence 54332211 01000 011 112234677764 44455554321111112344555555455567788999999999
Q ss_pred cHHHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHH
Q 046605 231 EHAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMG 310 (487)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 310 (487)
|+++++.+++.+ +++++|||+....... ....+.++.+|++..+++++|||||||....+.+++.+++++
T Consensus 226 e~~~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 295 (456)
T 2c1x_A 226 DDSLTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEA 295 (456)
T ss_dssp CHHHHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHH
T ss_pred hHHHHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHH
Confidence 998888777765 6899999987542110 011235688999988788999999999998888999999999
Q ss_pred HHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcE
Q 046605 311 LEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPL 390 (487)
Q Consensus 311 ~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~ 390 (487)
|++.+++|||+++..... .+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+
T Consensus 296 l~~~~~~~lw~~~~~~~~--------~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~ 366 (456)
T 2c1x_A 296 LEASRVPFIWSLRDKARV--------HLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPL 366 (456)
T ss_dssp HHHHTCCEEEECCGGGGG--------GSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred HHhcCCeEEEEECCcchh--------hCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceE
Confidence 999999999999865321 1676665543 4789999999999999999999999999999999999999999
Q ss_pred eccCccccchhhHHHHHHHh-hceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCC
Q 046605 391 VTWPVYAEQFYNEKIVNEVL-KIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGG 469 (487)
Q Consensus 391 l~~P~~~DQ~~~a~rv~~~~-G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g 469 (487)
|++|++.||+.||++++ +. |+|+.+... .+++++|.++|+++|+++..++||+||+++++.+++|+.+||
T Consensus 367 i~~P~~~dQ~~Na~~l~-~~~g~g~~l~~~--------~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 437 (456)
T 2c1x_A 367 ICRPFFGDQRLNGRMVE-DVLEIGVRIEGG--------VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKG 437 (456)
T ss_dssp EECCCSTTHHHHHHHHH-HTSCCEEECGGG--------SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred EecCChhhHHHHHHHHH-HHhCeEEEecCC--------CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999999999995 77 999999765 799999999999999822224899999999999999999999
Q ss_pred CcHHHHHHHHHHHhh
Q 046605 470 SSSSNLNSLIEDLSL 484 (487)
Q Consensus 470 ~~~~~~~~~~~~l~~ 484 (487)
||..++++||+.+.+
T Consensus 438 sS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 438 SSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHh
Confidence 999999999999864
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.3e-45 Score=366.99 Aligned_cols=405 Identities=18% Similarity=0.226 Sum_probs=271.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcc
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 84 (487)
|+|+||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+++. +++|..++.. ++.....
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI-----LPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC-----SCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc-----ccccccc
Confidence 6789999999999999999999999999999999999998877666655 6778776532 1111110
Q ss_pred cccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHHHhhhhc
Q 046605 85 LDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKCLALYE 164 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 164 (487)
....... ....+..+......+...+.+++++.+||+||+|.++.|+..+|+.+|||+|.+++.+..............
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 154 (424)
T 2iya_A 76 EESWPED-QESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ 154 (424)
T ss_dssp TCCCCSS-HHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS
T ss_pred hhhcchh-HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccc
Confidence 0000000 012233344444556778888999999999999998889999999999999999876431100000000000
Q ss_pred CCCCCCCCCCccccC-CCCCCcccccCCCCCCcCCCCCCchHHHHHHHhh------hcccCccEEEEcchhhhcHHHHHH
Q 046605 165 PHKKVSSDSEPFVMP-NLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASD------DSDLRSYGVVVNSFYELEHAYADH 237 (487)
Q Consensus 165 ~~~~~~~~~~~~~~P-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~~~l~~~~~~~ 237 (487)
. ..... ......| +......+. ...+.+ ..+. ..+.....+.. .........+.++...++++
T Consensus 155 ~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~---- 224 (424)
T 2iya_A 155 D-PTADR-GEEAAAPAGTGDAEEGA-EAEDGL-VRFF--TRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK---- 224 (424)
T ss_dssp C-CCC-----------------------HHHH-HHHH--HHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT----
T ss_pred c-ccccc-ccccccccccccchhhh-ccchhH-HHHH--HHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC----
Confidence 0 00000 0000000 000000000 000000 0000 00111111110 01113455778888777753
Q ss_pred HHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCc
Q 046605 238 YRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQN 317 (487)
Q Consensus 238 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 317 (487)
...+++++++|||+.... .+..+|++..+++++|||+|||......+.+..+++++++.+++
T Consensus 225 -~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 225 -GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp -GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred -ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 145678999999975321 11235776555678999999999866678899999999999999
Q ss_pred EEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEeccCccc
Q 046605 318 FIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYA 397 (487)
Q Consensus 318 ~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 397 (487)
++|.++..... +.+.. + ++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...
T Consensus 287 ~~~~~g~~~~~---~~~~~-~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 351 (424)
T 2iya_A 287 VVLSVGRFVDP---ADLGE-V---------PPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIA 351 (424)
T ss_dssp EEEECCTTSCG---GGGCS-C---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSH
T ss_pred EEEEECCcCCh---HHhcc-C---------CCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCcc
Confidence 99998865421 11111 2 468999999999999999987 999999999999999999999999999
Q ss_pred cchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 046605 398 EQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSSNLNS 477 (487)
Q Consensus 398 DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~ 477 (487)
||+.||.++ ++.|+|+.+... .+++++|.++|+++|+ |++++++++++++.++ +.+|. ..+.+
T Consensus 352 dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~---~~~~~--~~~~~ 414 (424)
T 2iya_A 352 EQTMNAERI-VELGLGRHIPRD--------QVTAEKLREAVLAVAS---DPGVAERLAAVRQEIR---EAGGA--RAAAD 414 (424)
T ss_dssp HHHHHHHHH-HHTTSEEECCGG--------GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH---TSCHH--HHHHH
T ss_pred chHHHHHHH-HHCCCEEEcCcC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---hcCcH--HHHHH
Confidence 999999999 599999999876 7899999999999998 7899999999999988 34443 44566
Q ss_pred HHHHHhh
Q 046605 478 LIEDLSL 484 (487)
Q Consensus 478 ~~~~l~~ 484 (487)
.|+.+.+
T Consensus 415 ~i~~~~~ 421 (424)
T 2iya_A 415 ILEGILA 421 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666643
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=5.9e-45 Score=362.38 Aligned_cols=372 Identities=15% Similarity=0.148 Sum_probs=238.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccC--CCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEA--GLPEGW 82 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~--~~~~~~ 82 (487)
.+.|||||+++|+.||++|+++||++|++|||+|||++++.+....+ . ++.+..+....... ..+...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~---------g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A---------GLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T---------TCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c---------CCeeEecCCchhHhhhcccccc
Confidence 46699999999999999999999999999999999999987755332 2 45555553211000 000000
Q ss_pred cccccchh-hhh-HHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHHHh
Q 046605 83 ENLDAITN-EVN-RELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKCL 160 (487)
Q Consensus 83 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 160 (487)
........ ... ......+..........+.+.+++++||+||+|.+++++..+|+.+|+|++.+...+.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~----- 164 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEP----- 164 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCH-----
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeeccccccccc-----
Confidence 00000000 000 11122223333445667788888999999999999999999999999999987543211100
Q ss_pred hhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHHHH-
Q 046605 161 ALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADHYR- 239 (487)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~- 239 (487)
.+... ..+ .+.....+................. .......
T Consensus 165 -------------------~~~~~---~~~-------------~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 205 (400)
T 4amg_A 165 -------------------GLGAL---IRR-------------AMSKDYERHGVTGEPTGSVRLTTTP----PSVEALLP 205 (400)
T ss_dssp -------------------HHHHH---HHH-------------HTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTSC
T ss_pred -------------------chhhH---HHH-------------HHHHHHHHhCCCcccccchhhcccC----chhhccCc
Confidence 00000 000 0111111111111111111111110 0000000
Q ss_pred -HHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCC--HHHHHHHHHHHHhcCC
Q 046605 240 -KALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFT--SAQLMEIAMGLEASGQ 316 (487)
Q Consensus 240 -~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~~ 316 (487)
....+....+++.... ....+.+|++..+++++|||||||+.... .+.+..+++++++.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~ 269 (400)
T 4amg_A 206 EDRRSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDA 269 (400)
T ss_dssp GGGCCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSS
T ss_pred ccccCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCc
Confidence 0001222222222111 12344568888888999999999987643 4678889999999999
Q ss_pred cEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEeccCcc
Q 046605 317 NFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVY 396 (487)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 396 (487)
++||..++.... .... + ++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|++
T Consensus 270 ~~v~~~~~~~~~----~~~~-~---------~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~ 333 (400)
T 4amg_A 270 EFVLTLGGGDLA----LLGE-L---------PANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHG 333 (400)
T ss_dssp EEEEECCTTCCC----CCCC-C---------CTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC-
T ss_pred eEEEEecCcccc----cccc-C---------CCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCc
Confidence 999998876532 1111 3 478999999999999999887 99999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 046605 397 AEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSSNLN 476 (487)
Q Consensus 397 ~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~ 476 (487)
.||+.||.++ ++.|+|+.++.. +.+++ +|+++|+ |++||+||++++++++ +.+|. ..+.
T Consensus 334 ~dQ~~na~~v-~~~G~g~~l~~~--------~~~~~----al~~lL~---d~~~r~~a~~l~~~~~---~~~~~--~~~a 392 (400)
T 4amg_A 334 SYQDTNRDVL-TGLGIGFDAEAG--------SLGAE----QCRRLLD---DAGLREAALRVRQEMS---EMPPP--AETA 392 (400)
T ss_dssp --CHHHHHHH-HHHTSEEECCTT--------TCSHH----HHHHHHH---CHHHHHHHHHHHHHHH---TSCCH--HHHH
T ss_pred ccHHHHHHHH-HHCCCEEEcCCC--------CchHH----HHHHHHc---CHHHHHHHHHHHHHHH---cCCCH--HHHH
Confidence 9999999999 599999999876 67665 5667888 8899999999999998 45554 4467
Q ss_pred HHHHHHh
Q 046605 477 SLIEDLS 483 (487)
Q Consensus 477 ~~~~~l~ 483 (487)
+.+|+|-
T Consensus 393 ~~le~lA 399 (400)
T 4amg_A 393 AXLVALA 399 (400)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 7777763
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.7e-41 Score=337.29 Aligned_cols=377 Identities=16% Similarity=0.198 Sum_probs=248.5
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENLDA 87 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (487)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+... +++|..++....+ .+. ....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~-~~~----~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARA-PIQ----RAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHH-Hhh----cccc
Confidence 6899999999999999999999999999999999998765555543 6888888643211 111 0000
Q ss_pred chhhhhHHHHHHHHHHHHhhhHHHHHHHh-hCCCCEEEeCC-CCcc--hHHHHHHhCCCeEEEechhHHHHHHHHHhhhh
Q 046605 88 ITNEVNRELIVKFYMATTKLQKPLEQLLQ-EHKPDCLVADM-FFPW--ATDAAAKFGIPRLVFHGTSFFSLCAIKCLALY 163 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~pDlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (487)
. . ...+..+... .....+.++++ ..+||+||+|. +..+ +..+|+.+|||+|.+++.+.+..
T Consensus 67 ~-~---~~~~~~~~~~--~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~--------- 131 (415)
T 1iir_A 67 L-T---AEDVRRFTTE--AIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP--------- 131 (415)
T ss_dssp C-C---HHHHHHHHHH--HHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred c-c---hHHHHHHHHH--HHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC---------
Confidence 0 0 0111111111 11223334433 57999999998 5568 89999999999999987643210
Q ss_pred cCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCC--CCch----HHHHHHHhhhcc------------cCccEEEEc
Q 046605 164 EPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDM--GDND----FSRFMKASDDSD------------LRSYGVVVN 225 (487)
Q Consensus 164 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~--~~~~----~~~~~~~~~~~~------------~~~~~~~~~ 225 (487)
.. ++|.....+.+......+. ... .... +..........+ ... ..+.+
T Consensus 132 --~~---------~~p~~~~~~~~~~~~~~n~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~ 197 (415)
T 1iir_A 132 --SP---------YYPPPPLGEPSTQDTIDIP--AQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVA 197 (415)
T ss_dssp --CS---------SSCCCC---------CHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEEC
T ss_pred --Cc---------ccCCccCCccccchHHHHH--HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEe
Confidence 00 1111000000000000000 000 0000 000001111100 011 35667
Q ss_pred chhhhcH-HHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHH
Q 046605 226 SFYELEH-AYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQL 304 (487)
Q Consensus 226 s~~~l~~-~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~ 304 (487)
+++.+++ + +..+ ++++|||+..... +..+.++.+|++.. +++|||+|||.. ...+.+
T Consensus 198 ~~~~l~~~~-----~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~ 255 (415)
T 1iir_A 198 ADPVLAPLQ-----PTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAV 255 (415)
T ss_dssp SCTTTSCCC-----CCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHH
T ss_pred eChhhcCCC-----cccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHH
Confidence 7766664 2 1112 7899999865321 12467889999765 369999999997 567888
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHh
Q 046605 305 MEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGV 384 (487)
Q Consensus 305 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal 384 (487)
..+++++++++++++|+++..... ... + ++|+++.+|+||.++|+.+++ ||||||+||+.||+
T Consensus 256 ~~~~~al~~~~~~~v~~~g~~~~~-----~~~-~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~ 318 (415)
T 1iir_A 256 RVAIDAIRAHGRRVILSRGWADLV-----LPD-D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAA 318 (415)
T ss_dssp HHHHHHHHHTTCCEEECTTCTTCC-----CSS-C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEeCCCccc-----ccC-C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHH
Confidence 889999999999999998865421 011 2 357999999999999977776 99999999999999
Q ss_pred hcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 046605 385 TAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRA 464 (487)
Q Consensus 385 ~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a 464 (487)
++|+|+|++|...||..||.++ ++.|+|+.+... .++.++|.++|+++ + |++|++++++++++++
T Consensus 319 ~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~-- 383 (415)
T 1iir_A 319 RAGAPQILLPQMADQPYYAGRV-AELGVGVAHDGP--------IPTFDSLSAALATA-L---TPETHARATAVAGTIR-- 383 (415)
T ss_dssp HHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSSS--------SCCHHHHHHHHHHH-T---SHHHHHHHHHHHHHSC--
T ss_pred HcCCCEEECCCCCccHHHHHHH-HHCCCcccCCcC--------CCCHHHHHHHHHHH-c---CHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999 699999999866 78999999999999 8 7899999999999876
Q ss_pred HhcCCCcHHHHHHHHHHHhh
Q 046605 465 VENGGSSSSNLNSLIEDLSL 484 (487)
Q Consensus 465 ~~~~g~~~~~~~~~~~~l~~ 484 (487)
+.+| ...+.+.|+.+.+
T Consensus 384 -~~~~--~~~~~~~i~~~~~ 400 (415)
T 1iir_A 384 -TDGA--AVAARLLLDAVSR 400 (415)
T ss_dssp -SCHH--HHHHHHHHHHHHT
T ss_pred -hcCh--HHHHHHHHHHHHh
Confidence 3333 3456677776643
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.7e-40 Score=331.94 Aligned_cols=384 Identities=15% Similarity=0.158 Sum_probs=262.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcc
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 84 (487)
.+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++.. ++++..++.+. +.....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~-----~~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEI-----IDADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCST-----TTCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccc-----cccccc
Confidence 5789999999999999999999999999999999999998777766655 67888776321 110000
Q ss_pred --cccchhhhhHHHHHH-HHHHHHhhhHHHHHHHhhCCCCEEEeC-CCCcchHHHHHHhCCCeEEEechhHHHHHHHHHh
Q 046605 85 --LDAITNEVNRELIVK-FYMATTKLQKPLEQLLQEHKPDCLVAD-MFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKCL 160 (487)
Q Consensus 85 --~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~pDlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 160 (487)
...... ...+.. +..........+.+.+++++||+||+| +..+++..+|+.+|||++.+.+......
T Consensus 84 ~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------ 154 (415)
T 3rsc_A 84 EVFGSDDL---GVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------ 154 (415)
T ss_dssp HHHHSSSS---CHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS------
T ss_pred hhhccccH---HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC------
Confidence 000000 122222 344444556788889999999999999 6777889999999999999864321000
Q ss_pred hhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhh------cccCc-cEEEEcchhhhcHH
Q 046605 161 ALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDD------SDLRS-YGVVVNSFYELEHA 233 (487)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~s~~~l~~~ 233 (487)
... ..+...+... ...+.+. ......+..+...... ..... ...+......+.
T Consensus 155 -------~~~--~~~~~~~~~~-------~~~p~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-- 214 (415)
T 3rsc_A 155 -------HYS--FSQDMVTLAG-------TIDPLDL--PVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-- 214 (415)
T ss_dssp -------SCC--HHHHHHHHHT-------CCCGGGC--HHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS--
T ss_pred -------ccc--cccccccccc-------cCChhhH--HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC--
Confidence 000 0000000000 0000000 0000001111111100 00011 333333333333
Q ss_pred HHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHh
Q 046605 234 YADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEA 313 (487)
Q Consensus 234 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~ 313 (487)
.....++.++.++||+.... .+..+|....+++++|||++||......+.+..+++++++
T Consensus 215 ---~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 274 (415)
T 3rsc_A 215 ---IAGDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274 (415)
T ss_dssp ---TTGGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTT
T ss_pred ---CCcccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhc
Confidence 23455677899999975431 2234466555567899999999987777889999999999
Q ss_pred cCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEecc
Q 046605 314 SGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTW 393 (487)
Q Consensus 314 ~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~ 393 (487)
.+++++|.++..... +.+.. + ++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++
T Consensus 275 ~~~~~v~~~g~~~~~---~~l~~-~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 275 QPWHVVMTLGGQVDP---AALGD-L---------PPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp SSCEEEEECTTTSCG---GGGCC-C---------CTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEEC
T ss_pred CCcEEEEEeCCCCCh---HHhcC-C---------CCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEe
Confidence 999999998865421 22221 2 468999999999999999888 99999999999999999999999
Q ss_pred CccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 046605 394 PVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSS 473 (487)
Q Consensus 394 P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~ 473 (487)
|...||+.||.++ ++.|+|+.+... ++++++|.++|.++|+ |++++++++++++.+. +. ++. .
T Consensus 340 p~~~~q~~~a~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~---~~-~~~-~ 402 (415)
T 3rsc_A 340 PQSFDVQPMARRV-DQLGLGAVLPGE--------KADGDTLLAAVGAVAA---DPALLARVEAMRGHVR---RA-GGA-A 402 (415)
T ss_dssp CCSGGGHHHHHHH-HHHTCEEECCGG--------GCCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHH---HS-CHH-H
T ss_pred CCcchHHHHHHHH-HHcCCEEEcccC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---hc-CHH-H
Confidence 9999999999999 599999999876 7899999999999999 8899999999999988 33 333 3
Q ss_pred HHHHHHHHHh
Q 046605 474 NLNSLIEDLS 483 (487)
Q Consensus 474 ~~~~~~~~l~ 483 (487)
.+.+.|+.+.
T Consensus 403 ~~~~~i~~~~ 412 (415)
T 3rsc_A 403 RAADAVEAYL 412 (415)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4555555543
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=9.7e-40 Score=324.91 Aligned_cols=383 Identities=17% Similarity=0.194 Sum_probs=259.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcc
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 84 (487)
|+|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.++.. ++++..++.+........ ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~--~~ 70 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPE--VV 70 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSS--SS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccc--cc
Confidence 4578999999999999999999999999999999999997766666554 677887763221100000 01
Q ss_pred cccchhhhhHHHHHH-HHHHHHhhhHHHHHHHhhCCCCEEEeC-CCCcchHHHHHHhCCCeEEEechhHHHHHHHHHhhh
Q 046605 85 LDAITNEVNRELIVK-FYMATTKLQKPLEQLLQEHKPDCLVAD-MFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKCLAL 162 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~pDlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 162 (487)
.... . ...+.. +..........+.+.+++++||+||+| ++..++..+|+.+|||+|.+.+......
T Consensus 71 ~~~~-~---~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-------- 138 (402)
T 3ia7_A 71 KQED-A---ETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE-------- 138 (402)
T ss_dssp CCTT-H---HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT--------
T ss_pred cccc-h---HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCc--------
Confidence 1001 1 223333 444445556788889999999999999 6777889999999999998864321000
Q ss_pred hcCCCCCCCCCCccccC--CCCCCcccccCCCCCCcCCCCC-CchHHHHHHHhhh------cccCc-cEEEEcchhhhcH
Q 046605 163 YEPHKKVSSDSEPFVMP--NLPGEIKLTRNQLPDPAKQDMG-DNDFSRFMKASDD------SDLRS-YGVVVNSFYELEH 232 (487)
Q Consensus 163 ~~~~~~~~~~~~~~~~P--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~------~~~~~-~~~~~~s~~~l~~ 232 (487)
.+.+ .+.. ......+.. ... ...+......... ..... ...+......+.
T Consensus 139 -------------~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~- 198 (402)
T 3ia7_A 139 -------------HYSLFKELWK---SNGQRHPAD---VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ- 198 (402)
T ss_dssp -------------TBCHHHHHHH---HHTCCCGGG---SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-
T ss_pred -------------cccccccccc---cccccChhh---HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-
Confidence 0000 0000 000000000 000 0001111111100 00001 223333322222
Q ss_pred HHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHH
Q 046605 233 AYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLE 312 (487)
Q Consensus 233 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~ 312 (487)
.....++.++.++||+.... .+...|....+++++||+++||......+.+..++++++
T Consensus 199 ----~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 257 (402)
T 3ia7_A 199 ----PFAETFDERFAFVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFA 257 (402)
T ss_dssp ----TTGGGCCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHT
T ss_pred ----CccccCCCCeEEeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHh
Confidence 23345677899999975431 223346555556789999999998877788999999999
Q ss_pred hcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEec
Q 046605 313 ASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVT 392 (487)
Q Consensus 313 ~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~ 392 (487)
+.+.+++|.++..... +.+.. + ++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|+
T Consensus 258 ~~~~~~~~~~g~~~~~---~~~~~-~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~ 322 (402)
T 3ia7_A 258 DTPWHVVMAIGGFLDP---AVLGP-L---------PPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVL 322 (402)
T ss_dssp TSSCEEEEECCTTSCG---GGGCS-C---------CTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred cCCcEEEEEeCCcCCh---hhhCC-C---------CCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEE
Confidence 9999999998865421 12221 2 478999999999999999888 9999999999999999999999
Q ss_pred cCc-cccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCc
Q 046605 393 WPV-YAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSS 471 (487)
Q Consensus 393 ~P~-~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~ 471 (487)
+|. ..||..||.++ ++.|+|+.+... .++++.|.++|.++|+ |++++++++++++.+. + ++++
T Consensus 323 ~p~~~~~q~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~~~~~ll~---~~~~~~~~~~~~~~~~---~-~~~~ 386 (402)
T 3ia7_A 323 VPHFATEAAPSAERV-IELGLGSVLRPD--------QLEPASIREAVERLAA---DSAVRERVRRMQRDIL---S-SGGP 386 (402)
T ss_dssp CGGGCGGGHHHHHHH-HHTTSEEECCGG--------GCSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH---T-SCHH
T ss_pred eCCCcccHHHHHHHH-HHcCCEEEccCC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHh---h-CChH
Confidence 999 99999999999 599999999876 7899999999999999 8899999999999887 3 3333
Q ss_pred HHHHHHHHHHHh
Q 046605 472 SSNLNSLIEDLS 483 (487)
Q Consensus 472 ~~~~~~~~~~l~ 483 (487)
..+.+.++.+.
T Consensus 387 -~~~~~~i~~~~ 397 (402)
T 3ia7_A 387 -ARAADEVEAYL 397 (402)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHHH
Confidence 44555555553
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.7e-40 Score=330.24 Aligned_cols=377 Identities=16% Similarity=0.118 Sum_probs=251.1
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENLDA 87 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (487)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++|..++..... .+.. . ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--ccc
Confidence 6899999999999999999999999999999999998766555554 6888888643211 1111 0 000
Q ss_pred chhhhhHHHHHHHH-HHHHhhhHHHHHHHhhCCCCEEEeCCC-Ccc--hHHHHHHhCCCeEEEechhHHHHHHHHHhhhh
Q 046605 88 ITNEVNRELIVKFY-MATTKLQKPLEQLLQEHKPDCLVADMF-FPW--ATDAAAKFGIPRLVFHGTSFFSLCAIKCLALY 163 (487)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (487)
.. ...+..+. .....+.+.+.+. ..+||+||+|.+ .++ +..+|+.+|||+|.+.+.+.+..
T Consensus 68 -~~---~~~~~~~~~~~~~~~~~~l~~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------- 132 (416)
T 1rrv_A 68 -PP---PEEEQRLAAMTVEMQFDAVPGA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------- 132 (416)
T ss_dssp -CC---HHHHHHHHHHHHHHHHHHHHHH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred -ch---hHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC---------
Confidence 00 01111111 1112222222221 579999999973 456 88899999999999876642210
Q ss_pred cCCCCCCCCCCccccC-CCCCCcccccCCCCCCc--CCCC----C--CchHHHHHHHhh--------hcccCccEEEEcc
Q 046605 164 EPHKKVSSDSEPFVMP-NLPGEIKLTRNQLPDPA--KQDM----G--DNDFSRFMKASD--------DSDLRSYGVVVNS 226 (487)
Q Consensus 164 ~~~~~~~~~~~~~~~P-~~~~~~~~~~~~l~~~~--~~~~----~--~~~~~~~~~~~~--------~~~~~~~~~~~~s 226 (487)
.. ++| .++ +.+....+.+.. .... . ...+..+..... ...... .++.++
T Consensus 133 --~~---------~~p~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~ 198 (416)
T 1rrv_A 133 --SP---------HLPPAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAA 198 (416)
T ss_dssp --CS---------SSCCCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECS
T ss_pred --Cc---------ccCCCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEcc
Confidence 00 111 100 000000000000 0000 0 000001111110 000112 467777
Q ss_pred hhhhcHHHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCccc-CCHHHHH
Q 046605 227 FYELEHAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVAN-FTSAQLM 305 (487)
Q Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~ 305 (487)
.+.++++. .. .++++|||+..... +..+.++.+|++.. +++|||++||... ...+.+.
T Consensus 199 ~~~l~~~~-----~~--~~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~ 257 (416)
T 1rrv_A 199 DPVLAPLQ-----PD--VDAVQTGAWLLSDE------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAK 257 (416)
T ss_dssp CTTTSCCC-----SS--CCCEECCCCCCCCC------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHH
T ss_pred CccccCCC-----CC--CCeeeECCCccCcc------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHH
Confidence 77776421 11 27899999865421 12467889999765 3689999999875 4567788
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhh
Q 046605 306 EIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVT 385 (487)
Q Consensus 306 ~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~ 385 (487)
.+++++++++++++|+++..... ... + ++|+.+.+|+||.++|+.+++ ||||||+||++||++
T Consensus 258 ~~~~al~~~~~~~v~~~g~~~~~-----~~~-~---------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~ 320 (416)
T 1rrv_A 258 VAVEAIRAQGRRVILSRGWTELV-----LPD-D---------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATR 320 (416)
T ss_dssp HHHHHHHHTTCCEEEECTTTTCC-----CSC-C---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCcccc-----ccC-C---------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHH
Confidence 89999999999999998876421 011 2 468999999999999988777 999999999999999
Q ss_pred cCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 046605 386 AGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAV 465 (487)
Q Consensus 386 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~ 465 (487)
+|+|+|++|...||+.||.++ ++.|+|+.+... ..+.++|.++|+++ + |++|+++++++++++.
T Consensus 321 ~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~--- 384 (416)
T 1rrv_A 321 AGVPQLVIPRNTDQPYFAGRV-AALGIGVAHDGP--------TPTFESLSAALTTV-L---APETRARAEAVAGMVL--- 384 (416)
T ss_dssp HTCCEEECCCSBTHHHHHHHH-HHHTSEEECSSS--------CCCHHHHHHHHHHH-T---SHHHHHHHHHHTTTCC---
T ss_pred cCCCEEEccCCCCcHHHHHHH-HHCCCccCCCCC--------CCCHHHHHHHHHHh-h---CHHHHHHHHHHHHHHh---
Confidence 999999999999999999999 599999999765 78999999999999 8 7899999999998887
Q ss_pred hcCCCcHHHHHHHH-HHHh
Q 046605 466 ENGGSSSSNLNSLI-EDLS 483 (487)
Q Consensus 466 ~~~g~~~~~~~~~~-~~l~ 483 (487)
+.+|. .+.+.| +.+.
T Consensus 385 ~~~~~---~~~~~i~e~~~ 400 (416)
T 1rrv_A 385 TDGAA---AAADLVLAAVG 400 (416)
T ss_dssp CCHHH---HHHHHHHHHHH
T ss_pred hcCcH---HHHHHHHHHHh
Confidence 33333 345555 7663
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.4e-40 Score=327.84 Aligned_cols=366 Identities=15% Similarity=0.113 Sum_probs=247.5
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENLDA 87 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (487)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.++.. ++.|..++.+... . .... ...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~~-~~~ 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AREP-GEL 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSCT-TCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hccc-cCC
Confidence 6899999999999999999999999999999999998877777665 7888888643221 0 0000 000
Q ss_pred chhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcch---HHHHHHhCCCeEEEechhHHHHHHHHHhhhhc
Q 046605 88 ITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWA---TDAAAKFGIPRLVFHGTSFFSLCAIKCLALYE 164 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 164 (487)
. ......+..........+.++++ +||+||+|..+..+ ..+|+.+|||++.+...+.....
T Consensus 68 ~-----~~~~~~~~~~~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~--------- 131 (404)
T 3h4t_A 68 P-----PGAAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS--------- 131 (404)
T ss_dssp C-----TTCGGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG---------
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC---------
Confidence 0 01111122233333444555554 79999999765533 78899999999988776532100
Q ss_pred CCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhccc-----------CccEEEEcchhhhcHH
Q 046605 165 PHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDL-----------RSYGVVVNSFYELEHA 233 (487)
Q Consensus 165 ~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~l~~~ 233 (487)
+.+... .... ... .. ..+....++....+. .....+.+....+.+.
T Consensus 132 --------------~~~~~~--~~~~--~~~---~~--~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~ 188 (404)
T 3h4t_A 132 --------------EQSQAE--RDMY--NQG---AD--RLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL 188 (404)
T ss_dssp --------------GSCHHH--HHHH--HHH---HH--HHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC
T ss_pred --------------hhHHHH--HHHH--HHH---HH--HHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC
Confidence 000000 0000 000 00 000000000000000 0011122333333322
Q ss_pred HHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHh
Q 046605 234 YADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEA 313 (487)
Q Consensus 234 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~ 313 (487)
.++++++.++|++..+.. ..+++++.+|++.. +++|||+|||+.. ..+.+..+++++++
T Consensus 189 ------~~~~~~~~~~G~~~~~~~------------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~ 247 (404)
T 3h4t_A 189 ------RPTDLGTVQTGAWILPDQ------------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRA 247 (404)
T ss_dssp ------CTTCCSCCBCCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHH
T ss_pred ------CCCCCCeEEeCccccCCC------------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHh
Confidence 235678889998754321 22467889999753 5699999999987 77889999999999
Q ss_pred cCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEecc
Q 046605 314 SGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTW 393 (487)
Q Consensus 314 ~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~ 393 (487)
.++++||+++..... . + + .++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++
T Consensus 248 ~~~~vv~~~g~~~~~----~----~-~------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 248 QGRRVVLSSGWAGLG----R----I-D------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp TTCCEEEECTTTTCC----C----S-S------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEEEeCCcccc----c----c-c------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEc
Confidence 999999998875421 1 1 0 1578999999999999998777 99999999999999999999999
Q ss_pred CccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 046605 394 PVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSS 473 (487)
Q Consensus 394 P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~ 473 (487)
|...||+.||.++ ++.|+|+.+... ++++++|.++|+++|+ ++|+++++++++.+. + + +..
T Consensus 311 p~~~dQ~~na~~~-~~~G~g~~l~~~--------~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~---~-~--~~~ 371 (404)
T 3h4t_A 311 PQKADQPYYAGRV-ADLGVGVAHDGP--------TPTVESLSAALATALT----PGIRARAAAVAGTIR---T-D--GTT 371 (404)
T ss_dssp CCSTTHHHHHHHH-HHHTSEEECSSS--------SCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC---C-C--HHH
T ss_pred CCcccHHHHHHHH-HHCCCEeccCcC--------CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh---h-h--HHH
Confidence 9999999999999 599999999876 7899999999999995 579999999998877 3 2 224
Q ss_pred HHHHHHHHH
Q 046605 474 NLNSLIEDL 482 (487)
Q Consensus 474 ~~~~~~~~l 482 (487)
.+.+.|+.+
T Consensus 372 ~~~~~i~~~ 380 (404)
T 3h4t_A 372 VAAKLLLEA 380 (404)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555554
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.6e-39 Score=327.17 Aligned_cols=389 Identities=13% Similarity=0.118 Sum_probs=244.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCC-Cc
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEG-WE 83 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~-~~ 83 (487)
..+|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++.. +++|..++......++... ..
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhc
Confidence 5679999999999999999999999999999999999998776555544 6888887632100000000 00
Q ss_pred cc------ccc----hhhhhHHHHHH----HHHHHH-----h-hhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCe
Q 046605 84 NL------DAI----TNEVNRELIVK----FYMATT-----K-LQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPR 143 (487)
Q Consensus 84 ~~------~~~----~~~~~~~~~~~----~~~~~~-----~-~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~ 143 (487)
.. .+. .....+..+.. +...+. . ....+.+++++++||+||+|.++.++..+|+.+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCE
Confidence 00 000 00000111111 111111 1 4566777778899999999998788999999999999
Q ss_pred EEEechhHHHHHHHHHhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhh-ccc----C
Q 046605 144 LVFHGTSFFSLCAIKCLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDD-SDL----R 218 (487)
Q Consensus 144 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~----~ 218 (487)
|.+...+.........+... ..+.|... .... + ...+..+..++.. ... .
T Consensus 169 v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---------~~~~---~--~~~l~~~~~~~g~~~~~~~~~~ 223 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLGL-----------LPDQPEEH---------REDP---L--AEWLTWTLEKYGGPAFDEEVVV 223 (441)
T ss_dssp EEECSSCCHHHHHHHHHHHH-----------GGGSCTTT---------CCCH---H--HHHHHHHHHHTTCCCCCGGGTS
T ss_pred EEEecCCCcchhhhhhhhhh-----------cccccccc---------ccch---H--HHHHHHHHHHcCCCCCCccccC
Confidence 99865442211111000000 00011000 0000 0 0012222222211 100 0
Q ss_pred ccEEEEcchhhhcHHHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCccc
Q 046605 219 SYGVVVNSFYELEHAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVAN 298 (487)
Q Consensus 219 ~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~ 298 (487)
....+......++.+ ..++. ..+++... ..+.++.+|++..+++++|||++||...
T Consensus 224 ~~~~l~~~~~~~~~~------~~~~~--~~~~~~~~----------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~ 279 (441)
T 2yjn_A 224 GQWTIDPAPAAIRLD------TGLKT--VGMRYVDY----------------NGPSVVPEWLHDEPERRRVCLTLGISSR 279 (441)
T ss_dssp CSSEEECSCGGGSCC------CCCCE--EECCCCCC----------------CSSCCCCGGGSSCCSSCEEEEEC-----
T ss_pred CCeEEEecCccccCC------CCCCC--CceeeeCC----------------CCCcccchHhhcCCCCCEEEEECCCCcc
Confidence 111222222222210 01110 12222110 0123456798876677899999999986
Q ss_pred C---CHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCcccccccc
Q 046605 299 F---TSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHC 375 (487)
Q Consensus 299 ~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HG 375 (487)
. ..+.+..+++++.+.++++||++++... +.+.. + ++|+++.+|+||.++|+.+++ |||||
T Consensus 280 ~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~----~~l~~-~---------~~~v~~~~~~~~~~ll~~ad~--~V~~~ 343 (441)
T 2yjn_A 280 ENSIGQVSIEELLGAVGDVDAEIIATFDAQQL----EGVAN-I---------PDNVRTVGFVPMHALLPTCAA--TVHHG 343 (441)
T ss_dssp -----CCSTTTTHHHHHTSSSEEEECCCTTTT----SSCSS-C---------CSSEEECCSCCHHHHGGGCSE--EEECC
T ss_pred cccChHHHHHHHHHHHHcCCCEEEEEECCcch----hhhcc-C---------CCCEEEecCCCHHHHHhhCCE--EEECC
Confidence 3 3466778889999999999999886432 12111 2 468999999999999988887 99999
Q ss_pred CchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHH
Q 046605 376 GWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAK 455 (487)
Q Consensus 376 G~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~ 455 (487)
|.||+.||+++|+|+|++|...||+.||.++ ++.|+|+.+... +++.++|.++|.++|+ |++++++++
T Consensus 344 G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~ 411 (441)
T 2yjn_A 344 GPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP--------ELTPDQLRESVKRVLD---DPAHRAGAA 411 (441)
T ss_dssp CHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT--------TCCHHHHHHHHHHHHH---CHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc--------cCCHHHHHHHHHHHhc---CHHHHHHHH
Confidence 9999999999999999999999999999999 599999999876 7899999999999998 889999999
Q ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHhh
Q 046605 456 AFGEMAKRAVENGGSSSSNLNSLIEDLSL 484 (487)
Q Consensus 456 ~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 484 (487)
++++.+. +.+|. ..+.+.|+.+.+
T Consensus 412 ~~~~~~~---~~~~~--~~~~~~i~~~~~ 435 (441)
T 2yjn_A 412 RMRDDML---AEPSP--AEVVGICEELAA 435 (441)
T ss_dssp HHHHHHH---TSCCH--HHHHHHHHHHHH
T ss_pred HHHHHHH---cCCCH--HHHHHHHHHHHH
Confidence 9999988 34443 456666766643
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.6e-39 Score=321.02 Aligned_cols=389 Identities=17% Similarity=0.208 Sum_probs=252.5
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
|.+.|+||||+|++.++.||++|+++|+++|.++||+|++++++...+.+.+. +++++.++.. .+.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHST-----LPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCC-----SCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCc-----Ccc
Confidence 66667789999999999999999999999999999999999998765444433 6777766531 111
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHHHh
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKCL 160 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 160 (487)
........... ....+..+...+......+.+++++++||+||+|.+.+++..+|+.+|||+|.+.+............
T Consensus 67 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 145 (430)
T 2iyf_A 67 PDADPEAWGST-LLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEV 145 (430)
T ss_dssp TTSCGGGGCSS-HHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHT
T ss_pred ccccccccchh-hHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccc
Confidence 11110000000 01222233333445567788899999999999998777889999999999999875432000000000
Q ss_pred hhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhh------hcccCccEEEEcchhhhcHHH
Q 046605 161 ALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASD------DSDLRSYGVVVNSFYELEHAY 234 (487)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~~~l~~~~ 234 (487)
... .......++. .. + +. ..+.++..+.. ........++.++...++..
T Consensus 146 ~~~----------~~~~~~~~~~--------~~-~---~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~- 200 (430)
T 2iyf_A 146 AEP----------MWREPRQTER--------GR-A---YY--ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH- 200 (430)
T ss_dssp HHH----------HHHHHHHSHH--------HH-H---HH--HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-
T ss_pred ccc----------hhhhhccchH--------HH-H---HH--HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-
Confidence 000 0000000000 00 0 00 00111111100 00112455677777666642
Q ss_pred HHHHHHHhCCc-eEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHh
Q 046605 235 ADHYRKALGRR-AWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEA 313 (487)
Q Consensus 235 ~~~~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~ 313 (487)
...++++ +++|||..... .+..+|....+++++||+++||......+.+..+++++++
T Consensus 201 ----~~~~~~~~v~~vG~~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~ 259 (430)
T 2iyf_A 201 ----ADRVDEDVYTFVGACQGDR-----------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGN 259 (430)
T ss_dssp ----GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTT
T ss_pred ----cccCCCccEEEeCCcCCCC-----------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhc
Confidence 1345667 99999864321 0112455544467799999999985567888889999988
Q ss_pred c-CCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEec
Q 046605 314 S-GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVT 392 (487)
Q Consensus 314 ~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~ 392 (487)
. +++++|.++..... +.+.. + ++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|+
T Consensus 260 ~~~~~~~~~~G~~~~~---~~l~~-~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~ 324 (430)
T 2iyf_A 260 LPGWHLVLQIGRKVTP---AELGE-L---------PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIA 324 (430)
T ss_dssp CTTEEEEEECC---CG---GGGCS-C---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEEEeCCCCCh---HHhcc-C---------CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEE
Confidence 6 88999988865421 12211 2 468999999999999999988 9999999999999999999999
Q ss_pred cCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcH
Q 046605 393 WPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSS 472 (487)
Q Consensus 393 ~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~ 472 (487)
+|...||..||.++ ++.|+|+.+... .++.++|.++|.++++ |+++++++.++++.+.+ ++ +.
T Consensus 325 ~p~~~~q~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~---~~-~~- 387 (430)
T 2iyf_A 325 VPQAVDQFGNADML-QGLGVARKLATE--------EATADLLRETALALVD---DPEVARRLRRIQAEMAQ---EG-GT- 387 (430)
T ss_dssp CCCSHHHHHHHHHH-HHTTSEEECCCC---------CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHH---HC-HH-
T ss_pred CCCccchHHHHHHH-HHcCCEEEcCCC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHh---cC-cH-
Confidence 99999999999999 599999998765 7899999999999998 78999999999988873 33 33
Q ss_pred HHHHHHHHHH
Q 046605 473 SNLNSLIEDL 482 (487)
Q Consensus 473 ~~~~~~~~~l 482 (487)
..+.+.++.+
T Consensus 388 ~~~~~~i~~~ 397 (430)
T 2iyf_A 388 RRAADLIEAE 397 (430)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 3445555544
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.3e-38 Score=314.77 Aligned_cols=366 Identities=16% Similarity=0.137 Sum_probs=251.1
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCC-------CCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAG-------LPE 80 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~-------~~~ 80 (487)
|||++++.++.||++|+++|+++|.++||+|++++++.+.+.++.. ++++..++....... .+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 6899999999999999999999999999999999998654444433 677777753210000 000
Q ss_pred CCcccccchhhhhHHHH-HH-HHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHH
Q 046605 81 GWENLDAITNEVNRELI-VK-FYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIK 158 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 158 (487)
... ..... ...+ .. +..........+.+++++++||+||+|.+..++..+|+.+|+|+|.+...+.
T Consensus 72 ~~~--~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~------- 139 (384)
T 2p6p_A 72 AIP--SDPVA---QARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV------- 139 (384)
T ss_dssp CCC--CSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-------
T ss_pred ccC--cchHH---HHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCc-------
Confidence 000 00000 1111 11 1222334466777888889999999998877888899999999998753210
Q ss_pred HhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhh-cccCccEEEEcchhhhcHHHHHH
Q 046605 159 CLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDD-SDLRSYGVVVNSFYELEHAYADH 237 (487)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~l~~~~~~~ 237 (487)
.. ..+.. . + ...+.++..+... .......++.++...++.+
T Consensus 140 ---------------~~---~~~~~-----------~---~--~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~---- 181 (384)
T 2p6p_A 140 ---------------DA---DGIHP-----------G---A--DAELRPELSELGLERLPAPDLFIDICPPSLRPA---- 181 (384)
T ss_dssp ---------------CC---TTTHH-----------H---H--HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT----
T ss_pred ---------------cc---chhhH-----------H---H--HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC----
Confidence 00 00000 0 0 0001112221110 0111345666666555532
Q ss_pred HHHHhC-CceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccC-----CHHHHHHHHHHH
Q 046605 238 YRKALG-RRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANF-----TSAQLMEIAMGL 311 (487)
Q Consensus 238 ~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~ 311 (487)
..++ .++.++++ . .+.++.+|++..+++++|||++||.... +.+.+..+++++
T Consensus 182 --~~~~~~~~~~~~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al 240 (384)
T 2p6p_A 182 --NAAPARMMRHVAT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDL 240 (384)
T ss_dssp --TSCCCEECCCCCC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHH
T ss_pred --CCCCCCceEecCC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHH
Confidence 1121 22333321 0 1134556887655677999999999864 457788999999
Q ss_pred HhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEe
Q 046605 312 EASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLV 391 (487)
Q Consensus 312 ~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l 391 (487)
++.+++++|++++.. . +.+.. .++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|
T Consensus 241 ~~~~~~~~~~~g~~~-----------~-~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v 303 (384)
T 2p6p_A 241 VRWDVELIVAAPDTV-----------A-EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQL 303 (384)
T ss_dssp HTTTCEEEEECCHHH-----------H-HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEE
T ss_pred hcCCcEEEEEeCCCC-----------H-HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEE
Confidence 999999999987531 1 11211 2578999 99999999988877 999999999999999999999
Q ss_pred ccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCc
Q 046605 392 TWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSS 471 (487)
Q Consensus 392 ~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~ 471 (487)
++|...||..||.++ ++.|+|+.+... ..+.++|.++|.++|+ |++++++++++++.++ +.+|.
T Consensus 304 ~~p~~~dq~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~---~~~~~- 367 (384)
T 2p6p_A 304 LIPKGSVLEAPARRV-ADYGAAIALLPG--------EDSTEAIADSCQELQA---KDTYARRAQDLSREIS---GMPLP- 367 (384)
T ss_dssp ECCCSHHHHHHHHHH-HHHTSEEECCTT--------CCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH---TSCCH-
T ss_pred EccCcccchHHHHHH-HHCCCeEecCcC--------CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---hCCCH-
Confidence 999999999999999 599999998765 7899999999999998 7899999999999998 44433
Q ss_pred HHHHHHHHHHHhhccC
Q 046605 472 SSNLNSLIEDLSLRRH 487 (487)
Q Consensus 472 ~~~~~~~~~~l~~~~~ 487 (487)
..+.+.|+.|.-|+|
T Consensus 368 -~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 368 -ATVVTALEQLAHHHH 382 (384)
T ss_dssp -HHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHhhhcc
Confidence 556777788776665
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=6.9e-37 Score=303.95 Aligned_cols=357 Identities=15% Similarity=0.156 Sum_probs=223.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCC----CC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGL----PE 80 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~----~~ 80 (487)
..+|||+|++.++.||++|+++|+++|.++||+|++++++.+.+.+... ++.+..++.+.....+ ..
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhcc
Confidence 5679999999999999999999999999999999999997766665554 6777777631100000 00
Q ss_pred CCc-ccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHHHHHHHH
Q 046605 81 GWE-NLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFSLCAIKC 159 (487)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 159 (487)
... ................+......+...+.+++++++||+||+|...+++..+|+.+|+|+|.+............
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~- 162 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKS- 162 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHH-
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhH-
Confidence 000 000000000011122223333455667888899999999999988788899999999999987543110000000
Q ss_pred hhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhc-ccCccEEEEcchhhhcHHHHHHH
Q 046605 160 LALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDS-DLRSYGVVVNSFYELEHAYADHY 238 (487)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l~~~~~~~~ 238 (487)
.+. . .+.....++... .......+......+...
T Consensus 163 --------------------~~~-----------~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 197 (398)
T 4fzr_A 163 --------------------AGV-----------G---------ELAPELAELGLTDFPDPLLSIDVCPPSMEAQ----- 197 (398)
T ss_dssp --------------------HHH-----------H---------HTHHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred --------------------HHH-----------H---------HHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----
Confidence 000 0 000111111000 001112222222222211
Q ss_pred HHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccC--------CHHHHHHHHHH
Q 046605 239 RKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANF--------TSAQLMEIAMG 310 (487)
Q Consensus 239 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~a 310 (487)
.......+.++++.. .+.++..|+...+++++|||++||.... ..+.+..++++
T Consensus 198 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~a 259 (398)
T 4fzr_A 198 PKPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQE 259 (398)
T ss_dssp --CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHH
T ss_pred CCCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHH
Confidence 000011112222100 1234456766555678999999999753 34568889999
Q ss_pred HHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcE
Q 046605 311 LEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPL 390 (487)
Q Consensus 311 ~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~ 390 (487)
+.+.+++++|+.++... +.+.. + ++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+
T Consensus 260 l~~~~~~~v~~~~~~~~----~~l~~-~---------~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 260 LPKLGFEVVVAVSDKLA----QTLQP-L---------PEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp GGGGTCEEEECCCC-------------C---------CTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred HHhCCCEEEEEeCCcch----hhhcc-C---------CCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCE
Confidence 99999999999887542 11111 2 578999999999999999888 99999999999999999999
Q ss_pred eccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 046605 391 VTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAK 462 (487)
Q Consensus 391 l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 462 (487)
|++|...||+.||.++ ++.|+|+.+... .++++.|.++|.++|+ |+++++++++.++.+.
T Consensus 324 v~~p~~~~q~~~a~~~-~~~g~g~~~~~~--------~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 324 VSVPVIAEVWDSARLL-HAAGAGVEVPWE--------QAGVESVLAACARIRD---DSSYVGNARRLAAEMA 383 (398)
T ss_dssp EECCCSGGGHHHHHHH-HHTTSEEECC---------------CHHHHHHHHHH---CTHHHHHHHHHHHHHT
T ss_pred EecCCchhHHHHHHHH-HHcCCEEecCcc--------cCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHH
Confidence 9999999999999999 699999999876 7899999999999998 7899999999999887
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.1e-35 Score=295.14 Aligned_cols=362 Identities=16% Similarity=0.156 Sum_probs=242.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC-C--
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE-G-- 81 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~-~-- 81 (487)
.++|||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.+... ++.+..++.+.....+.. .
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhccc
Confidence 567899999999999999999999999999999999999 666655544 677877752210000000 0
Q ss_pred -C---------cccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhH
Q 046605 82 -W---------ENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSF 151 (487)
Q Consensus 82 -~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~ 151 (487)
. ...... ......+......+...+.+++++++||+||+|..++++..+|+.+|+|+|.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 88 DNPRFAETVATRPAIDL-----EEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp HCHHHHHTGGGSCCCSG-----GGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred CCccccccccCChhhhH-----HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 0 000000 0112222334455677889999999999999998888889999999999997753210
Q ss_pred HHHHHHHHhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhc
Q 046605 152 FSLCAIKCLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELE 231 (487)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 231 (487)
.. ..+.. .+..+ +.....++..........+......+.
T Consensus 163 ~~-------------------------~~~~~-------~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 163 RT-------------------------RGMHR-------SIASF---------LTDLMDKHQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp CC-------------------------TTHHH-------HHHTT---------CHHHHHHTTCCCCCCSEEECSSCGGGG
T ss_pred Cc-------------------------cchhh-------HHHHH---------HHHHHHHcCCCCCCCCeEEEeCCHHHC
Confidence 00 00000 00000 122222221111111222221111111
Q ss_pred HHHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccC--CHHHHHHHHH
Q 046605 232 HAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANF--TSAQLMEIAM 309 (487)
Q Consensus 232 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~ 309 (487)
. ........+.++ |. ..+..+.+|+...+++++||+++||.... ..+.+..+++
T Consensus 202 ~-----~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 257 (398)
T 3oti_A 202 L-----EAEPEGWFMRWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIA 257 (398)
T ss_dssp T-----TSCCCSBCCCCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHH
T ss_pred C-----CCCCCCCCcccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHH
Confidence 0 000000011111 00 01234456776666788999999999763 5677899999
Q ss_pred HHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCCc
Q 046605 310 GLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVP 389 (487)
Q Consensus 310 a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP 389 (487)
++++.+++++|+.++... +.+.. + ++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|
T Consensus 258 ~l~~~~~~~v~~~g~~~~----~~l~~-~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 258 AAGEVDADFVLALGDLDI----SPLGT-L---------PRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp HHHTSSSEEEEECTTSCC----GGGCS-C---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCC
T ss_pred HHHcCCCEEEEEECCcCh----hhhcc-C---------CCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 999999999999887542 22221 2 478999999999999999887 9999999999999999999
Q ss_pred EeccCccccchhhH--HHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 390 LVTWPVYAEQFYNE--KIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 390 ~l~~P~~~DQ~~~a--~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
+|++|...||..|| .++ ++.|+|+.+... +.+.+.|. ++|+ |++++++++++++.+. +.
T Consensus 322 ~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~~--------~~~~~~l~----~ll~---~~~~~~~~~~~~~~~~---~~ 382 (398)
T 3oti_A 322 QLLAPDPRDQFQHTAREAV-SRRGIGLVSTSD--------KVDADLLR----RLIG---DESLRTAAREVREEMV---AL 382 (398)
T ss_dssp EEECCCTTCCSSCTTHHHH-HHHTSEEECCGG--------GCCHHHHH----HHHH---CHHHHHHHHHHHHHHH---TS
T ss_pred EEEcCCCchhHHHHHHHHH-HHCCCEEeeCCC--------CCCHHHHH----HHHc---CHHHHHHHHHHHHHHH---hC
Confidence 99999999999999 999 699999999876 78888887 7887 8899999999999988 34
Q ss_pred CCCcHHHHHHHHHHHh
Q 046605 468 GGSSSSNLNSLIEDLS 483 (487)
Q Consensus 468 ~g~~~~~~~~~~~~l~ 483 (487)
.+. ..+.+.++.+.
T Consensus 383 ~~~--~~~~~~l~~l~ 396 (398)
T 3oti_A 383 PTP--AETVRRIVERI 396 (398)
T ss_dssp CCH--HHHHHHHHHHH
T ss_pred CCH--HHHHHHHHHHh
Confidence 433 44666666654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.6e-35 Score=291.87 Aligned_cols=369 Identities=12% Similarity=0.138 Sum_probs=237.2
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEe-eCCCccC-CCCCC---
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKII-KFPSAEA-GLPEG--- 81 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i-~~~~~~~-~~~~~--- 81 (487)
+|||+|++.++.||++|++.|+++|.++||+|++++++.+.+.+... ++.+..+ +.+.... .+...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999987655444443 5667666 2211000 00000
Q ss_pred Ccc-cccchhhhhHHHHHHHHHHHHhh-------hHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechhHHH
Q 046605 82 WEN-LDAITNEVNRELIVKFYMATTKL-------QKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTSFFS 153 (487)
Q Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 153 (487)
... ...... ......+......+ ...+.+++++++||+||+|...+++..+|+.+|+|++.+.......
T Consensus 72 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDT---EAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccc---hhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 000 000000 01111111222233 6778889999999999999877788889999999999875321000
Q ss_pred HHHHHHhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcc-cCccEEEEcchhhhcH
Q 046605 154 LCAIKCLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSD-LRSYGVVVNSFYELEH 232 (487)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~l~~ 232 (487)
. .. +.. .+.. .+.....++.... ......+......+..
T Consensus 149 ~-------------------~~-----~~~-------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (391)
T 3tsa_A 149 A-------------------GP-----FSD-------RAHE---------LLDPVCRHHGLTGLPTPELILDPCPPSLQA 188 (391)
T ss_dssp T-------------------TH-----HHH-------HHHH---------HHHHHHHHTTSSSSCCCSEEEECSCGGGSC
T ss_pred c-------------------cc-----ccc-------hHHH---------HHHHHHHHcCCCCCCCCceEEEecChhhcC
Confidence 0 00 000 0000 0111111111110 0112222222222211
Q ss_pred HHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCccc--CC-HHHHHHHHH
Q 046605 233 AYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVAN--FT-SAQLMEIAM 309 (487)
Q Consensus 233 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~ 309 (487)
........+.++ |.. .+..+..|+...+++++|++++||... .. .+.+..+++
T Consensus 189 -----~~~~~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~ 244 (391)
T 3tsa_A 189 -----SDAPQGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAA 244 (391)
T ss_dssp -----TTSCCCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHH
T ss_pred -----CCCCccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHH
Confidence 000001111222 110 123344677665678899999999854 23 777888888
Q ss_pred HHHhc-CCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHHhhcCC
Q 046605 310 GLEAS-GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGV 388 (487)
Q Consensus 310 a~~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~Gv 388 (487)
+ ++. +++++|..++... +.+.. + ++|+.+.+|+|+.++|+.+++ ||||||.||+.||+++|+
T Consensus 245 ~-~~~p~~~~v~~~~~~~~----~~l~~-~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~ 307 (391)
T 3tsa_A 245 A-TELPGVEAVIAVPPEHR----ALLTD-L---------PDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGI 307 (391)
T ss_dssp H-HTSTTEEEEEECCGGGG----GGCTT-C---------CTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTC
T ss_pred h-ccCCCeEEEEEECCcch----hhccc-C---------CCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCC
Confidence 8 888 8899999876532 12111 2 478999999999999988887 999999999999999999
Q ss_pred cEeccCccccchhhHHHHHHHhhceEeecc--cccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHh
Q 046605 389 PLVTWPVYAEQFYNEKIVNEVLKIGIGVGI--QKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVE 466 (487)
Q Consensus 389 P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~--~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~ 466 (487)
|+|++|...||..|+.++ ++.|+|+.+.. . ..+++.|.++|.++|+ |++++++++++++.+. +
T Consensus 308 P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~--------~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~---~ 372 (391)
T 3tsa_A 308 PQLVLPQYFDQFDYARNL-AAAGAGICLPDEQA--------QSDHEQFTDSIATVLG---DTGFAAAAIKLSDEIT---A 372 (391)
T ss_dssp CEEECCCSTTHHHHHHHH-HHTTSEEECCSHHH--------HTCHHHHHHHHHHHHT---CTHHHHHHHHHHHHHH---T
T ss_pred CEEecCCcccHHHHHHHH-HHcCCEEecCcccc--------cCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHH---c
Confidence 999999999999999999 59999999987 6 6899999999999999 7899999999999887 3
Q ss_pred cCCCcHHHHHHHHHHHhhc
Q 046605 467 NGGSSSSNLNSLIEDLSLR 485 (487)
Q Consensus 467 ~~g~~~~~~~~~~~~l~~~ 485 (487)
.++. ..+.+.++.+...
T Consensus 373 ~~~~--~~~~~~i~~~~~~ 389 (391)
T 3tsa_A 373 MPHP--AALVRTLENTAAI 389 (391)
T ss_dssp SCCH--HHHHHHHHHC---
T ss_pred CCCH--HHHHHHHHHHHhc
Confidence 4433 5567777776544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.9e-32 Score=270.23 Aligned_cols=371 Identities=17% Similarity=0.223 Sum_probs=243.5
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCcc--------
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAE-------- 75 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~-------- 75 (487)
+..+|||+|++.++.||++|+++|+++|.++||+|++++++.+.+.+... ++++..++.....
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhh
Confidence 36679999999999999999999999999999999999997654444433 6777777520000
Q ss_pred ----CCCCCCCcccccchhhhhHHHHHHHHHH-HHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechh
Q 046605 76 ----AGLPEGWENLDAITNEVNRELIVKFYMA-TTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTS 150 (487)
Q Consensus 76 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~ 150 (487)
...+. ....... ......+... ...+...+.+++++++||+||+|....++..+|+.+|+|+|......
T Consensus 88 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 88 RFDTDSPEG-LTPEQLS-----ELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHSCSCCTT-CCHHHHT-----TSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred hhcccCCcc-CChhHhh-----HHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 00000 0000000 0111121222 23345678888899999999999877778889999999999864321
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhc------ccCccEEEE
Q 046605 151 FFSLCAIKCLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDS------DLRSYGVVV 224 (487)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 224 (487)
... ++.... +.. .+..+..+.... .......+.
T Consensus 162 ~~~-------------------------~~~~~~-------~~~---------~~~~~~~~~g~~~~~~~~~~~~d~~i~ 200 (412)
T 3otg_A 162 DTP-------------------------DDLTRS-------IEE---------EVRGLAQRLGLDLPPGRIDGFGNPFID 200 (412)
T ss_dssp CCC-------------------------SHHHHH-------HHH---------HHHHHHHHTTCCCCSSCCGGGGCCEEE
T ss_pred cCc-------------------------hhhhHH-------HHH---------HHHHHHHHcCCCCCcccccCCCCeEEe
Confidence 100 000000 000 011111111000 011222333
Q ss_pred cchhhhcHHHHHHHHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhh-hcCCCCCcEEEEeccCcccCCHHH
Q 046605 225 NSFYELEHAYADHYRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKW-LNSKQPNSVVYICFGSVANFTSAQ 303 (487)
Q Consensus 225 ~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~ 303 (487)
.+...+.. +...+......+.+.... ......+| ....+++++|++++||......+.
T Consensus 201 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~ 259 (412)
T 3otg_A 201 IFPPSLQE-----PEFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEV 259 (412)
T ss_dssp CSCGGGSC-----HHHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHH
T ss_pred eCCHHhcC-----CcccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHH
Confidence 33222221 111121111112111110 11223445 232345779999999997666788
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchhHHHH
Q 046605 304 LMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEG 383 (487)
Q Consensus 304 ~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~ea 383 (487)
+..+++++.+.+.+++|..++.... +.+.. + ++|+.+.+|+|+.++|+++++ ||+|||.+|+.||
T Consensus 260 ~~~~~~~l~~~~~~~~~~~g~~~~~---~~l~~-~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea 324 (412)
T 3otg_A 260 LRAAIDGLAGLDADVLVASGPSLDV---SGLGE-V---------PANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGA 324 (412)
T ss_dssp HHHHHHHHHTSSSEEEEECCSSCCC---TTCCC-C---------CTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCCCh---hhhcc-C---------CCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHH
Confidence 9999999999999999999876522 22221 2 468999999999999999998 9999999999999
Q ss_pred hhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 046605 384 VTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKR 463 (487)
Q Consensus 384 l~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 463 (487)
+++|+|+|++|...||..|+.++ ++.|+|+.+... ..++++|.++|.++|+ |+++++++.+.++++.
T Consensus 325 ~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~--------~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~- 391 (412)
T 3otg_A 325 LGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLPD--------NISPDSVSGAAKRLLA---EESYRAGARAVAAEIA- 391 (412)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCGG--------GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHH-
T ss_pred HHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCcc--------cCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999 599999999876 7899999999999998 8899999999988887
Q ss_pred HHhcCCCcHHHHHHHHHHHh
Q 046605 464 AVENGGSSSSNLNSLIEDLS 483 (487)
Q Consensus 464 a~~~~g~~~~~~~~~~~~l~ 483 (487)
+++ +. ..+.+.++.+.
T Consensus 392 --~~~-~~-~~~~~~~~~l~ 407 (412)
T 3otg_A 392 --AMP-GP-DEVVRLLPGFA 407 (412)
T ss_dssp --HSC-CH-HHHHTTHHHHH
T ss_pred --cCC-CH-HHHHHHHHHHh
Confidence 343 33 44566666554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=8.1e-29 Score=241.97 Aligned_cols=314 Identities=13% Similarity=0.115 Sum_probs=195.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc--chhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAP--HLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENL 85 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 85 (487)
.||+|...|+-||++|.++||++|.+|||+|+|++++...+ .+++. +++++.++.. ++... ...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~----~~~~~-~~~ 68 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVS----GLRGK-GLK 68 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC---------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECC----CcCCC-CHH
Confidence 48999888888999999999999999999999999865321 22332 6777777532 11110 000
Q ss_pred ccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEechhHHHHHHHHHhhhh
Q 046605 86 DAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFHGTSFFSLCAIKCLALY 163 (487)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (487)
..+......... .....+++++++||+||++..+. .+..+|+.+|+|++..-.
T Consensus 69 ---------~~~~~~~~~~~~-~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~--------------- 123 (365)
T 3s2u_A 69 ---------SLVKAPLELLKS-LFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ--------------- 123 (365)
T ss_dssp -------------CHHHHHHH-HHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC---------------
T ss_pred ---------HHHHHHHHHHHH-HHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec---------------
Confidence 111111111111 22456788889999999997655 356679999999986411
Q ss_pred cCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHHHHHHhC
Q 046605 164 EPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADHYRKALG 243 (487)
Q Consensus 164 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 243 (487)
..+|++.+ ++..+. +.. +..++++..+ ..
T Consensus 124 ------------n~~~G~~n-----------------------r~l~~~------a~~-v~~~~~~~~~---------~~ 152 (365)
T 3s2u_A 124 ------------NAVAGTAN-----------------------RSLAPI------ARR-VCEAFPDTFP---------AS 152 (365)
T ss_dssp ------------SSSCCHHH-----------------------HHHGGG------CSE-EEESSTTSSC---------C-
T ss_pred ------------chhhhhHH-----------------------Hhhccc------cce-eeeccccccc---------Cc
Confidence 11222211 111111 111 2222222111 12
Q ss_pred CceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhc----CCcEE
Q 046605 244 RRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEAS----GQNFI 319 (487)
Q Consensus 244 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i 319 (487)
.+..++|+........ +. .......+++++|++..||.... .....+.++++.+ +..++
T Consensus 153 ~k~~~~g~pvr~~~~~-------------~~--~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi 215 (365)
T 3s2u_A 153 DKRLTTGNPVRGELFL-------------DA--HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIR 215 (365)
T ss_dssp --CEECCCCCCGGGCC-------------CT--TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEE
T ss_pred CcEEEECCCCchhhcc-------------ch--hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEE
Confidence 4566777543321100 00 11112223466899999998753 3334455666654 45677
Q ss_pred EEecCCCCCCCcccccccCchhHHHHh--cCCCcEeecccch-HhhhcccCccccccccCchhHHHHhhcCCcEeccCcc
Q 046605 320 WVVRKNKNNGGEEEKEDWLPEGFEKRM--EGKGLIIRGWAPQ-VLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVY 396 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~~~~~vp~-~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 396 (487)
|.++.... +.+.+.. .+.++.+.+|+++ .++|+.+++ +|||+|.+|+.|++++|+|+|.+|..
T Consensus 216 ~~~G~~~~------------~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p 281 (365)
T 3s2u_A 216 HQAGRQHA------------EITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLP 281 (365)
T ss_dssp EECCTTTH------------HHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC--
T ss_pred EecCcccc------------ccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccC
Confidence 77765431 1222211 2568899999997 469999998 99999999999999999999999974
Q ss_pred ----ccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHH
Q 046605 397 ----AEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRA 454 (487)
Q Consensus 397 ----~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a 454 (487)
.+|..||+.+ ++.|+|+.+..+ .+|++.|.++|.++|+ |++.++++
T Consensus 282 ~~~~~~Q~~NA~~l-~~~G~a~~l~~~--------~~~~~~L~~~i~~ll~---d~~~~~~m 331 (365)
T 3s2u_A 282 HAIDDHQTRNAEFL-VRSGAGRLLPQK--------STGAAELAAQLSEVLM---HPETLRSM 331 (365)
T ss_dssp ---CCHHHHHHHHH-HTTTSEEECCTT--------TCCHHHHHHHHHHHHH---CTHHHHHH
T ss_pred CCCCcHHHHHHHHH-HHCCCEEEeecC--------CCCHHHHHHHHHHHHC---CHHHHHHH
Confidence 5899999999 599999999876 8999999999999998 55544433
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=206.92 Aligned_cols=163 Identities=23% Similarity=0.382 Sum_probs=140.1
Q ss_pred CChhhHhhhhcCCCCCcEEEEeccCccc-CCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCC
Q 046605 271 VDEQECLKWLNSKQPNSVVYICFGSVAN-FTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGK 349 (487)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 349 (487)
.++.++.+|++..+++++|||++||... ...+.+..+++++++.+++++|++++.... . + ++
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----~----~---------~~ 68 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----T----L---------GL 68 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----T----C---------CT
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----c----C---------CC
Confidence 3678999999877677899999999974 567888999999999999999999865321 0 2 36
Q ss_pred CcEeecccchHhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCcc
Q 046605 350 GLIIRGWAPQVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFV 429 (487)
Q Consensus 350 nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~ 429 (487)
|+.+.+|+||.+++.++.+.+||||||.+|+.||+++|+|+|++|...||..||.++ ++.|+|+.+... .+
T Consensus 69 ~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~--------~~ 139 (170)
T 2o6l_A 69 NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN--------TM 139 (170)
T ss_dssp TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT--------TC
T ss_pred cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc--------cC
Confidence 899999999999996666666999999999999999999999999999999999999 599999999876 78
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 046605 430 KREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAK 462 (487)
Q Consensus 430 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 462 (487)
+.++|.++|.++++ |++|+++|+++++.++
T Consensus 140 ~~~~l~~~i~~ll~---~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 140 SSTDLLNALKRVIN---DPSYKENVMKLSRIQH 169 (170)
T ss_dssp CHHHHHHHHHHHHH---CHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHc---CHHHHHHHHHHHHHhh
Confidence 99999999999998 7899999999999876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.84 E-value=9.1e-19 Score=171.08 Aligned_cols=307 Identities=12% Similarity=0.098 Sum_probs=188.8
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc--chhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAP--HLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENL 85 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 85 (487)
|||++++.+..||..+++.|+++|.++||+|++++...... .+.. .++++..++.+. +... .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~----~~~~--~- 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISG----LRGK--G- 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCC----CTTC--C-
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCc----cCcC--c-
Confidence 89999998777999999999999999999999999865321 1111 256676665321 1110 0
Q ss_pred ccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEechhHHHHHHHHHhhhh
Q 046605 86 DAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFHGTSFFSLCAIKCLALY 163 (487)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 163 (487)
. ...+...... ......+.+++++.+||+|+++.... .+..++..+|+|+|......
T Consensus 71 ----~---~~~~~~~~~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------- 129 (364)
T 1f0k_A 71 ----I---KALIAAPLRI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------- 129 (364)
T ss_dssp ----H---HHHHTCHHHH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-------------
T ss_pred ----c---HHHHHHHHHH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-------------
Confidence 0 0111111111 11234567778888999999986542 45667888999998542110
Q ss_pred cCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHHHHHHhC
Q 046605 164 EPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADHYRKALG 243 (487)
Q Consensus 164 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 243 (487)
.|+ + ..+.. ....+.++..+-. . +
T Consensus 130 --------------~~~--------------~---------~~~~~------~~~~d~v~~~~~~-~-----------~- 153 (364)
T 1f0k_A 130 --------------IAG--------------L---------TNKWL------AKIATKVMQAFPG-A-----------F- 153 (364)
T ss_dssp --------------SCC--------------H---------HHHHH------TTTCSEEEESSTT-S-----------S-
T ss_pred --------------CCc--------------H---------HHHHH------HHhCCEEEecChh-h-----------c-
Confidence 000 0 01100 1122333332211 1 2
Q ss_pred CceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhc--CCcEEEE
Q 046605 244 RRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEAS--GQNFIWV 321 (487)
Q Consensus 244 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~ 321 (487)
+++..+|...... .. .. + .....+...+++++|++..|+... ......++++++.+ +.++++.
T Consensus 154 ~~~~~i~n~v~~~--~~-------~~---~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i 218 (364)
T 1f0k_A 154 PNAEVVGNPVRTD--VL-------AL---P-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQ 218 (364)
T ss_dssp SSCEECCCCCCHH--HH-------TS---C-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEE
T ss_pred CCceEeCCccchh--hc-------cc---c-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEE
Confidence 2455666432110 00 00 0 011122222345578888888753 44455566776655 4666676
Q ss_pred ecCCCCCCCcccccccCchhHHHHhcCCCcEeecccc-hHhhhcccCccccccccCchhHHHHhhcCCcEeccCcc---c
Q 046605 322 VRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAP-QVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVY---A 397 (487)
Q Consensus 322 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp-~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~---~ 397 (487)
+|.... +. +. ....+..-+|+.+.+|++ ..+++..+++ +|+++|.+++.||+++|+|+|+.|.. .
T Consensus 219 ~G~~~~----~~----l~-~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 219 SGKGSQ----QS----VE-QAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp CCTTCH----HH----HH-HHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTC
T ss_pred cCCchH----HH----HH-HHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCch
Confidence 665431 11 11 111111225899999995 4779999998 99999989999999999999999987 7
Q ss_pred cchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 398 EQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 398 DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
||..|+..++ ..|.|..+... +.+.++|.++|.++ +
T Consensus 288 ~q~~~~~~~~-~~g~g~~~~~~--------d~~~~~la~~i~~l-~ 323 (364)
T 1f0k_A 288 QQYWNALPLE-KAGAAKIIEQP--------QLSVDAVANTLAGW-S 323 (364)
T ss_dssp HHHHHHHHHH-HTTSEEECCGG--------GCCHHHHHHHHHTC-C
T ss_pred hHHHHHHHHH-hCCcEEEeccc--------cCCHHHHHHHHHhc-C
Confidence 9999999994 99999988765 67899999999988 5
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.68 E-value=3.9e-15 Score=137.96 Aligned_cols=118 Identities=8% Similarity=0.019 Sum_probs=91.0
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHh-cCCCcEeecccchH-hh
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM-EGKGLIIRGWAPQV-LI 362 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~vp~~-~l 362 (487)
+.+.|+|++|.... ......+++++.... ++.++++.... ..+.+.... +.+|+.+..|+++. ++
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~----------~~~~l~~~~~~~~~v~v~~~~~~m~~~ 222 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNP----------NLKKLQKFAKLHNNIRLFIDHENIAKL 222 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCT----------THHHHHHHHHTCSSEEEEESCSCHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCch----------HHHHHHHHHhhCCCEEEEeCHHHHHHH
Confidence 35689999997542 335666777776654 57777766542 223333322 24589999999975 69
Q ss_pred hcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeeccc
Q 046605 363 LDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQ 419 (487)
Q Consensus 363 l~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~ 419 (487)
+..+++ +||+|| +|++|+++.|+|+|++|...+|..||..+ ++.|+++.+..-
T Consensus 223 m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 223 MNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp HHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred HHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 999888 999999 89999999999999999999999999999 599999988653
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=1.8e-15 Score=134.33 Aligned_cols=132 Identities=13% Similarity=0.080 Sum_probs=95.5
Q ss_pred CCCcEEEEeccCcccCCHHHHHHH-----HHHHHhcC-CcEEEEecCCCCCCCcccccccCchhHHHHh-----------
Q 046605 284 QPNSVVYICFGSVANFTSAQLMEI-----AMGLEASG-QNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM----------- 346 (487)
Q Consensus 284 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~----------- 346 (487)
+++++|||+.||... -.+.+..+ +++|.+.+ .++++++|..... ..+.+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~---------~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS---------EFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC---------CCCSHHHHHTCEECSCCCSS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh---------hHHHHHHhhhcccccccccc
Confidence 356799999999842 23433333 48888887 7999999976531 111111111
Q ss_pred --------------c--CCCcEeecccchH-hhhc-ccCccccccccCchhHHHHhhcCCcEeccCcc----ccchhhHH
Q 046605 347 --------------E--GKGLIIRGWAPQV-LILD-HEAVGGFVTHCGWNSILEGVTAGVPLVTWPVY----AEQFYNEK 404 (487)
Q Consensus 347 --------------~--~~nv~~~~~vp~~-~ll~-~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~~a~ 404 (487)
. .-++.+.+|+++. ++|+ .+++ +|||||.||+.|++++|+|+|++|.. .||..||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~ 173 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIAD 173 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHH
Confidence 0 1245577888875 7999 9888 99999999999999999999999974 36999999
Q ss_pred HHHHHhhceEeecccccccccCCccCHHHHHHHHHHH
Q 046605 405 IVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEI 441 (487)
Q Consensus 405 rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~l 441 (487)
++ ++.|+|+.+ +.+.|.++|.++
T Consensus 174 ~l-~~~G~~~~~-------------~~~~L~~~i~~l 196 (224)
T 2jzc_A 174 KF-VELGYVWSC-------------APTETGLIAGLR 196 (224)
T ss_dssp HH-HHHSCCCEE-------------CSCTTTHHHHHH
T ss_pred HH-HHCCCEEEc-------------CHHHHHHHHHHH
Confidence 99 599998654 345666777666
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.35 E-value=9.6e-12 Score=121.65 Aligned_cols=137 Identities=19% Similarity=0.205 Sum_probs=87.9
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCCCCcccccccCchhHHHHh-cCCCcEeecccc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM-EGKGLIIRGWAP 358 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~vp 358 (487)
+++.|+++.|...... .+..+++|++.+ +.++++..+.+.. +-+.++... ..+++.+.++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~----------~~~~l~~~~~~~~~v~~~g~~g 264 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV----------VREAVFPVLKGVRNFVLLDPLE 264 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH----------HHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH----------HHHHHHHHhccCCCEEEECCCC
Confidence 3457778877553321 355566666543 4555555453320 111222221 135898886555
Q ss_pred h---HhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHH
Q 046605 359 Q---VLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 359 ~---~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
+ .++++.+++ ||+.+| |.+.||+++|+|+|+.+...++.. ++ ..|.|+.+. .+.++|.
T Consensus 265 ~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~-----------~d~~~la 325 (376)
T 1v4v_A 265 YGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG-----------TDPEGVY 325 (376)
T ss_dssp HHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC-----------SCHHHHH
T ss_pred HHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC-----------CCHHHHH
Confidence 4 578988888 888873 456699999999999887677665 33 567886652 3789999
Q ss_pred HHHHHHhcCchHHHHHHHHH
Q 046605 436 KAVNEIMMGDRAEEMRSRAK 455 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~ 455 (487)
++|.++++ |++.+++..
T Consensus 326 ~~i~~ll~---d~~~~~~~~ 342 (376)
T 1v4v_A 326 RVVKGLLE---NPEELSRMR 342 (376)
T ss_dssp HHHHHHHT---CHHHHHHHH
T ss_pred HHHHHHHh---ChHhhhhhc
Confidence 99999998 665544433
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.34 E-value=5.3e-10 Score=109.72 Aligned_cols=313 Identities=12% Similarity=0.059 Sum_probs=170.7
Q ss_pred CCceEEEEEcC--C--CCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 5 ICQLHIFFFPF--L--AHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 5 ~~~~~Il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
++||||++++. + ..|.-.-+..|++.| +||+|++++........... ....++.+..++...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------- 67 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-----DKTLDYEVIRWPRSV------- 67 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-----HTTCSSEEEEESSSS-------
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-----ccccceEEEEccccc-------
Confidence 56889999974 3 457777888999999 79999999987543311111 012356666664210
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEechhHHHHHHHH
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFHGTSFFSLCAIK 158 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~ 158 (487)
. ... . .....+.++++..+||+|++..... ....++..+++|.+++.........
T Consensus 68 ~------~~~---~-----------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--- 124 (394)
T 3okp_A 68 M------LPT---P-----------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW--- 124 (394)
T ss_dssp C------CSC---H-----------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---
T ss_pred c------ccc---h-----------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---
Confidence 0 001 1 1123567778888999999876544 4555688899995554332111100
Q ss_pred HhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHHH
Q 046605 159 CLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADHY 238 (487)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 238 (487)
............ ....++.++..+-... +.+
T Consensus 125 -----------------------------------------~~~~~~~~~~~~---~~~~~d~ii~~s~~~~-----~~~ 155 (394)
T 3okp_A 125 -----------------------------------------SMLPGSRQSLRK---IGTEVDVLTYISQYTL-----RRF 155 (394)
T ss_dssp -----------------------------------------TTSHHHHHHHHH---HHHHCSEEEESCHHHH-----HHH
T ss_pred -----------------------------------------hhcchhhHHHHH---HHHhCCEEEEcCHHHH-----HHH
Confidence 000001112221 2234556666553222 223
Q ss_pred HHHh--CCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhc--
Q 046605 239 RKAL--GRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEAS-- 314 (487)
Q Consensus 239 ~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-- 314 (487)
...+ ..++..|..-..... ... ........+.+-+.-. ++..+++..|+... .+.+..++++++.+
T Consensus 156 ~~~~~~~~~~~vi~ngv~~~~-~~~------~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~ 225 (394)
T 3okp_A 156 KSAFGSHPTFEHLPSGVDVKR-FTP------ATPEDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIA 225 (394)
T ss_dssp HHHHCSSSEEEECCCCBCTTT-SCC------CCHHHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEecCCcCHHH-cCC------CCchhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHh
Confidence 3323 246666664322110 000 0000123333333322 23366777788653 23344444554433
Q ss_pred ---CCcEEEEecCCCCCCCcccccccCchhHHHHh--cCCCcEeecccchHh---hhcccCcccccc-----------cc
Q 046605 315 ---GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM--EGKGLIIRGWAPQVL---ILDHEAVGGFVT-----------HC 375 (487)
Q Consensus 315 ---~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~~~~~vp~~~---ll~~~~~~~~I~-----------HG 375 (487)
+.+++++ |... ..+.+.... ..+++.+.+++|+.+ ++..+++ +|. -|
T Consensus 226 ~~~~~~l~i~-G~g~-----------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~ 291 (394)
T 3okp_A 226 ARPDAQLLIV-GSGR-----------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEG 291 (394)
T ss_dssp HSTTCEEEEE-CCCT-----------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCS
T ss_pred hCCCeEEEEE-cCch-----------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccc
Confidence 4555554 3322 111222211 137899999997544 7778888 665 56
Q ss_pred CchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 376 GWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 376 G~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
...++.||+++|+|+|+-+.. .....+ ..|.|..+.. -+.+++.++|.++++
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~~----~~~e~i--~~~~g~~~~~----------~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTSG----GAPETV--TPATGLVVEG----------SDVDKLSELLIELLD 343 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSST----TGGGGC--CTTTEEECCT----------TCHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHcCCCEEEeCCC----ChHHHH--hcCCceEeCC----------CCHHHHHHHHHHHHh
Confidence 667999999999999997643 333334 2347777754 479999999999998
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.30 E-value=2.2e-09 Score=107.03 Aligned_cols=79 Identities=15% Similarity=0.052 Sum_probs=60.3
Q ss_pred CCCcEeecccch---HhhhcccCccccccc----cCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccc
Q 046605 348 GKGLIIRGWAPQ---VLILDHEAVGGFVTH----CGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQK 420 (487)
Q Consensus 348 ~~nv~~~~~vp~---~~ll~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~ 420 (487)
.++|.+.+++|+ ..++..+++ +|.- |...++.||+++|+|+|+.+. ......+ +.-+.|+.+..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCC--
Confidence 468999999986 457888888 5543 335689999999999998653 4455555 45567877754
Q ss_pred cccccCCccCHHHHHHHHHHHhc
Q 046605 421 WCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 421 ~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
-+.+++.++|.++++
T Consensus 376 --------~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 376 --------HSPHAWADALATLLD 390 (438)
T ss_dssp --------CCHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHc
Confidence 489999999999997
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.30 E-value=1.6e-11 Score=120.76 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=86.6
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCCCCcccccccCchhHHHHh-cCCCcEeecccc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM-EGKGLIIRGWAP 358 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~vp 358 (487)
+++.|+++.+-...... .+..+++|+..+ +.++|+..+.+. . +-+.+.+.. ..+++.+.++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~------~----~~~~l~~~~~~~~~v~~~~~lg 297 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP------N----VREPVNKLLKGVSNIVLIEPQQ 297 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------H----HHHHHHHHTTTCTTEEEECCCC
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh------H----HHHHHHHHHcCCCCEEEeCCCC
Confidence 45677777532222222 255667776653 456666544322 0 111222211 246898877775
Q ss_pred ---hHhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHH
Q 046605 359 ---QVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 359 ---~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
...+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++ .++ ..|.++.+. .++++|.
T Consensus 298 ~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v-~~G~~~lv~-----------~d~~~l~ 358 (396)
T 3dzc_A 298 YLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAV-AAGTVKLVG-----------TNQQQIC 358 (396)
T ss_dssp HHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHH-HHTSEEECT-----------TCHHHHH
T ss_pred HHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHH-HcCceEEcC-----------CCHHHHH
Confidence 4568888888 898887 66689999999999986555553 243 668774432 3689999
Q ss_pred HHHHHHhcCchHHHHHHHHH
Q 046605 436 KAVNEIMMGDRAEEMRSRAK 455 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~ 455 (487)
+++.++++ |+..++++.
T Consensus 359 ~ai~~ll~---d~~~~~~m~ 375 (396)
T 3dzc_A 359 DALSLLLT---DPQAYQAMS 375 (396)
T ss_dssp HHHHHHHH---CHHHHHHHH
T ss_pred HHHHHHHc---CHHHHHHHh
Confidence 99999998 666554443
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.29 E-value=2e-09 Score=106.14 Aligned_cols=312 Identities=13% Similarity=0.094 Sum_probs=163.7
Q ss_pred CCceEEEEEcCC---C-CCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 5 ICQLHIFFFPFL---A-HGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 5 ~~~~~Il~~~~~---~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
.+||||+++... . .|.-.-+..++++|.++||+|++++............. .+ + ++..++.. .
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~----~~-~-~~~~~~~~-------~ 84 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV----SG-G-KAVPIPYN-------G 84 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE----EC-C-CCC-------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc----cC-C-cEEecccc-------C
Confidence 567999999732 2 45567889999999999999999998754331111100 00 0 11111100 0
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEechhHHHHHHHH
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFHGTSFFSLCAIK 158 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~ 158 (487)
....... . ......+.+++++.+||+|++..... .+..++...++|+|......
T Consensus 85 ---~~~~~~~----~---------~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~-------- 140 (406)
T 2gek_A 85 ---SVARLRF----G---------PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTS-------- 140 (406)
T ss_dssp ---------C----C---------HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCC--------
T ss_pred ---Ccccccc----c---------HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCc--------
Confidence 0000000 0 01123566777778999999876544 34556777799988763210
Q ss_pred HhhhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHHH
Q 046605 159 CLALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADHY 238 (487)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 238 (487)
++.. .....+...+...+...+.++..+-.. .+.+
T Consensus 141 ----------------------~~~~------------------~~~~~~~~~~~~~~~~~d~ii~~s~~~-----~~~~ 175 (406)
T 2gek_A 141 ----------------------TTKS------------------LTLSVFQGILRPYHEKIIGRIAVSDLA-----RRWQ 175 (406)
T ss_dssp ----------------------CCSH------------------HHHHHHHSTTHHHHTTCSEEEESSHHH-----HHHH
T ss_pred ----------------------chhh------------------hhHHHHHHHHHHHHhhCCEEEECCHHH-----HHHH
Confidence 0000 000001111112234456666655322 1223
Q ss_pred HHHhC-CceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhh--cCCCCCcEEEEeccCc-ccCCHHHHHHHHHHHHhc
Q 046605 239 RKALG-RRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWL--NSKQPNSVVYICFGSV-ANFTSAQLMEIAMGLEAS 314 (487)
Q Consensus 239 ~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~a~~~~ 314 (487)
...++ .++ .|..-... +....-. ...+++..+++..|+. .. .+....+++++..+
T Consensus 176 ~~~~~~~~~-vi~~~v~~------------------~~~~~~~~~~~~~~~~~~i~~~G~~~~~--~Kg~~~li~a~~~l 234 (406)
T 2gek_A 176 MEALGSDAV-EIPNGVDV------------------ASFADAPLLDGYPREGRTVLFLGRYDEP--RKGMAVLLAALPKL 234 (406)
T ss_dssp HHHHSSCEE-ECCCCBCH------------------HHHHTCCCCTTCSCSSCEEEEESCTTSG--GGCHHHHHHHHHHH
T ss_pred HHhcCCCcE-EecCCCCh------------------hhcCCCchhhhccCCCeEEEEEeeeCcc--ccCHHHHHHHHHHH
Confidence 23333 334 44432110 0000000 0000122566777877 43 23344445555443
Q ss_pred -----CCcEEEEecCCCCCCCcccccccCchhHHHHhc--CCCcEeecccchH---hhhcccCcccccc----ccCc-hh
Q 046605 315 -----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRME--GKGLIIRGWAPQV---LILDHEAVGGFVT----HCGW-NS 379 (487)
Q Consensus 315 -----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~~~~~vp~~---~ll~~~~~~~~I~----HGG~-gs 379 (487)
+.+++++ |... . +.+....+ .+++.+.+++++. +++..+++ +|. +.|. .+
T Consensus 235 ~~~~~~~~l~i~-G~~~-----------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~ 299 (406)
T 2gek_A 235 VARFPDVEILIV-GRGD-----------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIV 299 (406)
T ss_dssp HTTSTTCEEEEE-SCSC-----------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHH
T ss_pred HHHCCCeEEEEE-cCCc-----------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchH
Confidence 4444443 3322 1 12222211 4789999999964 68888888 552 3444 48
Q ss_pred HHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHH
Q 046605 380 ILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRS 452 (487)
Q Consensus 380 ~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 452 (487)
+.||+++|+|+|+.+. ......+ +..+.|..+.. -+.+++.++|.++++ ++..++
T Consensus 300 ~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~----------~d~~~l~~~i~~l~~---~~~~~~ 354 (406)
T 2gek_A 300 LVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVPV----------DDADGMAAALIGILE---DDQLRA 354 (406)
T ss_dssp HHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECCT----------TCHHHHHHHHHHHHH---CHHHHH
T ss_pred HHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeCC----------CCHHHHHHHHHHHHc---CHHHHH
Confidence 9999999999999765 4555556 45567877754 478999999999997 555433
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.26 E-value=1.4e-10 Score=114.08 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=86.9
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCCCCcccccccCchhHHHHh-cCCCcEeecccc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM-EGKGLIIRGWAP 358 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~vp 358 (487)
+++.++++.|...... +.+..+++++..+ +.++|+..+.+. . +-+.+++.. ..+++.+.++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~------~----~~~~l~~~~~~~~~v~l~~~l~ 291 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP------A----VREKAMAILGGHERIHLIEPLD 291 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH------H----HHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH------H----HHHHHHHHhCCCCCEEEeCCCC
Confidence 4567878766432211 1245566655542 446666544321 1 111222211 246899999886
Q ss_pred ---hHhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHH
Q 046605 359 ---QVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 359 ---~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
...++..+++ +|+-.|. .+.||.++|+|+|++|-..+++. ++ +.|.|+.+. .++++|.
T Consensus 292 ~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v-~~g~~~lv~-----------~d~~~l~ 352 (403)
T 3ot5_A 292 AIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GI-EAGTLKLIG-----------TNKENLI 352 (403)
T ss_dssp HHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HH-HHTSEEECC-----------SCHHHHH
T ss_pred HHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----he-eCCcEEEcC-----------CCHHHHH
Confidence 3568888887 8887642 23699999999999976666654 33 668776552 3789999
Q ss_pred HHHHHHhcCchHHHHHHHHH
Q 046605 436 KAVNEIMMGDRAEEMRSRAK 455 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~ 455 (487)
+++.++++ |+..++++.
T Consensus 353 ~ai~~ll~---~~~~~~~m~ 369 (403)
T 3ot5_A 353 KEALDLLD---NKESHDKMA 369 (403)
T ss_dssp HHHHHHHH---CHHHHHHHH
T ss_pred HHHHHHHc---CHHHHHHHH
Confidence 99999998 666655443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.22 E-value=7.6e-11 Score=115.53 Aligned_cols=136 Identities=17% Similarity=0.188 Sum_probs=86.9
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCCCCcccccccCchhHHHHhc-CCCcEeecccc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRME-GKGLIIRGWAP 358 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~vp 358 (487)
+++.++++.|...... +.+..+++++..+ +.++++..+.+. . +-+.+.+... .+++.+.++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~------~----~~~~l~~~~~~~~~v~~~g~~~ 272 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP------N----VREPVNRILGHVKNVILIDPQE 272 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH------H----HHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH------H----HHHHHHHHhhcCCCEEEeCCCC
Confidence 3557888888765321 3455556665543 455555434221 0 1112222211 36899876666
Q ss_pred h---HhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHH
Q 046605 359 Q---VLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 359 ~---~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
+ .+++..+++ ||+.+| |++.||+++|+|+|+.+..++.. .++ ..|.|+.+. . +.++|.
T Consensus 273 ~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v-~~g~g~lv~----------~-d~~~la 333 (384)
T 1vgv_A 273 YLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAV-TAGTVRLVG----------T-DKQRIV 333 (384)
T ss_dssp HHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHH-HHTSEEEEC----------S-SHHHHH
T ss_pred HHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhh-hCCceEEeC----------C-CHHHHH
Confidence 4 568888998 888875 45889999999999998754433 343 567887763 3 789999
Q ss_pred HHHHHHhcCchHHHHHHH
Q 046605 436 KAVNEIMMGDRAEEMRSR 453 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~ 453 (487)
++|.++++ |++.+++
T Consensus 334 ~~i~~ll~---d~~~~~~ 348 (384)
T 1vgv_A 334 EEVTRLLK---DENEYQA 348 (384)
T ss_dssp HHHHHHHH---CHHHHHH
T ss_pred HHHHHHHh---ChHHHhh
Confidence 99999998 5554433
No 32
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.21 E-value=3.9e-09 Score=107.21 Aligned_cols=79 Identities=16% Similarity=0.031 Sum_probs=59.0
Q ss_pred CCCcEeecccchH---hhhccc----Ccccccc----ccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEee
Q 046605 348 GKGLIIRGWAPQV---LILDHE----AVGGFVT----HCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGV 416 (487)
Q Consensus 348 ~~nv~~~~~vp~~---~ll~~~----~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l 416 (487)
.++|.+.+++|+. .++..+ ++ +|. -|-..++.||+++|+|+|+-.. ......+ +.-..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 4689999999754 477778 77 552 2334689999999999998753 3445555 354578877
Q ss_pred cccccccccCCccCHHHHHHHHHHHhc
Q 046605 417 GIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
+. -+.+++.++|.++++
T Consensus 407 ~~----------~d~~~la~~i~~ll~ 423 (499)
T 2r60_A 407 DP----------EDPEDIARGLLKAFE 423 (499)
T ss_dssp CT----------TCHHHHHHHHHHHHS
T ss_pred CC----------CCHHHHHHHHHHHHh
Confidence 54 488999999999998
No 33
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.18 E-value=1.8e-08 Score=100.19 Aligned_cols=145 Identities=16% Similarity=0.168 Sum_probs=83.8
Q ss_pred EEEEeccCcc-c-CCHHHHHHHHHHHHh----cCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHh
Q 046605 288 VVYICFGSVA-N-FTSAQLMEIAMGLEA----SGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVL 361 (487)
Q Consensus 288 ~v~vs~Gs~~-~-~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ 361 (487)
.+++..|+.. . -..+.+...+..+.. .+.+++++ |... +.+...+ ..+..+. +.++.+.+|+++.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~-----~~~~~~l-~~~~~~~-~~~~~~~g~~~~~~ 323 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-----PELEGWA-RSLEEKH-GNVKVITEMLSREF 323 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCC-----HHHHHHH-HHHHHHC-TTEEEECSCCCHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCC-----hhHHHHH-HHHHhhc-CCEEEEcCCCCHHH
Confidence 7778888877 3 334444444444433 23444433 3222 1110101 1111222 24566778899754
Q ss_pred ---hhcccCcccccc----ccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHH
Q 046605 362 ---ILDHEAVGGFVT----HCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAI 434 (487)
Q Consensus 362 ---ll~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l 434 (487)
++..+++ +|. -|-..++.||+++|+|+|+-. .......+ ..|.|..+.. -+.+++
T Consensus 324 ~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~--~~~~g~~~~~----------~d~~~l 385 (439)
T 3fro_A 324 VRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII--TNETGILVKA----------GDPGEL 385 (439)
T ss_dssp HHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHC--CTTTCEEECT----------TCHHHH
T ss_pred HHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeE--EcCceEEeCC----------CCHHHH
Confidence 6777887 552 344579999999999999864 34445444 3468888764 489999
Q ss_pred HHHHHHHhc-C-chHHHHHHHHHHHH
Q 046605 435 VKAVNEIMM-G-DRAEEMRSRAKAFG 458 (487)
Q Consensus 435 ~~~i~~ll~-~-~~~~~~~~~a~~l~ 458 (487)
.++|.++++ . +....+.+++++..
T Consensus 386 a~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 386 ANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp HHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 999999986 1 11234444444443
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.13 E-value=1.4e-07 Score=92.48 Aligned_cols=314 Identities=10% Similarity=0.065 Sum_probs=161.7
Q ss_pred ceEEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccc
Q 046605 7 QLHIFFFPFLAH-GHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENL 85 (487)
Q Consensus 7 ~~~Il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 85 (487)
++++....+|.. |.-.-...|+++|.++||+|++++....... .. ...++.+..++.+.. . ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~-------~~~~i~~~~~~~~~~----~----~~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NK-------VYPNIYFHEVTVNQY----S----VF 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-cc-------cCCceEEEecccccc----c----cc
Confidence 466777777754 5556778999999999999999998532111 10 112555655542211 0 00
Q ss_pred ccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcc--hHHHHH-Hh--CCCeEEEechhHHHHHHHHHh
Q 046605 86 DAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPW--ATDAAA-KF--GIPRLVFHGTSFFSLCAIKCL 160 (487)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~--~~~~A~-~~--giP~v~~~~~~~~~~~~~~~~ 160 (487)
... . .. + .....+.+++++.+||+|++...... ...++. .+ ++|+|..........
T Consensus 79 ~~~-~---~~-~--------~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------ 139 (394)
T 2jjm_A 79 QYP-P---YD-L--------ALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------ 139 (394)
T ss_dssp CSC-C---HH-H--------HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT------
T ss_pred ccc-c---cc-H--------HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc------
Confidence 000 1 01 1 01234566777789999998754432 223344 33 489876543211100
Q ss_pred hhhcCCCCCCCCCCccccCCCCCCcccccCCCCCCcCCCCCCchHHHHHHHhhhcccCccEEEEcchhhhcHHHHHHHHH
Q 046605 161 ALYEPHKKVSSDSEPFVMPNLPGEIKLTRNQLPDPAKQDMGDNDFSRFMKASDDSDLRSYGVVVNSFYELEHAYADHYRK 240 (487)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~ 240 (487)
.+. ..+ +..+... .+..++.++..+-.. .+.+..
T Consensus 140 ------------------~~~-----------~~~---------~~~~~~~---~~~~ad~ii~~s~~~-----~~~~~~ 173 (394)
T 2jjm_A 140 ------------------LGS-----------DPS---------LNNLIRF---GIEQSDVVTAVSHSL-----INETHE 173 (394)
T ss_dssp ------------------TTT-----------CTT---------THHHHHH---HHHHSSEEEESCHHH-----HHHHHH
T ss_pred ------------------cCC-----------CHH---------HHHHHHH---HHhhCCEEEECCHHH-----HHHHHH
Confidence 000 000 1111111 123355556555322 222333
Q ss_pred HhC--CceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhc----
Q 046605 241 ALG--RRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEAS---- 314 (487)
Q Consensus 241 ~~~--~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---- 314 (487)
.++ .++..|..-..... . .......+.+-+... ++..+++..|.... .+.+..++++++.+
T Consensus 174 ~~~~~~~~~vi~ngv~~~~-~---------~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~ 240 (394)
T 2jjm_A 174 LVKPNKDIQTVYNFIDERV-Y---------FKRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEV 240 (394)
T ss_dssp HTCCSSCEEECCCCCCTTT-C---------CCCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSS
T ss_pred hhCCcccEEEecCCccHHh-c---------CCcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhC
Confidence 332 46666664322110 0 000122333333221 22356666787653 23344445555432
Q ss_pred CCcEEEEecCCCCCCCcccccccCchhHHHHhc----CCCcEeecccch-HhhhcccCccccc----cccCchhHHHHhh
Q 046605 315 GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRME----GKGLIIRGWAPQ-VLILDHEAVGGFV----THCGWNSILEGVT 385 (487)
Q Consensus 315 ~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~----~~nv~~~~~vp~-~~ll~~~~~~~~I----~HGG~gs~~eal~ 385 (487)
+.++++ +|.... .+.+....+ .++|.+.++..+ .+++..+++ +| .-|...++.||++
T Consensus 241 ~~~l~i-~G~g~~-----------~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma 306 (394)
T 2jjm_A 241 DAKLLL-VGDGPE-----------FCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMA 306 (394)
T ss_dssp CCEEEE-ECCCTT-----------HHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHH
T ss_pred CCEEEE-ECCchH-----------HHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHh
Confidence 444444 343321 112222211 357888887654 568888888 66 5566779999999
Q ss_pred cCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 386 AGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 386 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
+|+|+|+.+.. .....+ +..+.|+.+.. -+.+++.++|.++++
T Consensus 307 ~G~PvI~~~~~----~~~e~v-~~~~~g~~~~~----------~d~~~la~~i~~l~~ 349 (394)
T 2jjm_A 307 CGVPCIGTRVG----GIPEVI-QHGDTGYLCEV----------GDTTGVADQAIQLLK 349 (394)
T ss_dssp TTCCEEEECCT----TSTTTC-CBTTTEEEECT----------TCHHHHHHHHHHHHH
T ss_pred cCCCEEEecCC----ChHHHh-hcCCceEEeCC----------CCHHHHHHHHHHHHc
Confidence 99999987642 333344 34457877754 478999999999997
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.12 E-value=9e-09 Score=100.14 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=90.6
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCC----c-EEEEecCCCCCCCcccccccCchhHHHHhc-CCCcEeecccch
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQ----N-FIWVVRKNKNNGGEEEKEDWLPEGFEKRME-GKGLIIRGWAPQ 359 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~vp~ 359 (487)
+..+++..|+... .+....+++++..+.. + -++.+|.... +.+. .+..+.. .+++.+.++..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~----~~~~-----~~~~~~~~~~~v~~~g~~~~ 263 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP----RKFE-----ALAEKLGVRSNVHFFSGRND 263 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC----HHHH-----HHHHHHTCGGGEEEESCCSC
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH----HHHH-----HHHHHcCCCCcEEECCCccc
Confidence 3467777787653 3456666777776532 1 2333443221 1211 1111111 468888888664
Q ss_pred -HhhhcccCcccccc----ccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHH
Q 046605 360 -VLILDHEAVGGFVT----HCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAI 434 (487)
Q Consensus 360 -~~ll~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l 434 (487)
.+++..+++ +|. -|...++.||+++|+|+|+... ..+...+ +..+.|..+.. .-+.+++
T Consensus 264 ~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~---------~~~~~~l 327 (374)
T 2iw1_A 264 VSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAE---------PFSQEQL 327 (374)
T ss_dssp HHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECS---------SCCHHHH
T ss_pred HHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCC---------CCCHHHH
Confidence 568888888 664 5677899999999999999764 4556677 57788988862 2489999
Q ss_pred HHHHHHHhcCchHHHHHHHH
Q 046605 435 VKAVNEIMMGDRAEEMRSRA 454 (487)
Q Consensus 435 ~~~i~~ll~~~~~~~~~~~a 454 (487)
.++|.++++ |++.+++.
T Consensus 328 ~~~i~~l~~---~~~~~~~~ 344 (374)
T 2iw1_A 328 NEVLRKALT---QSPLRMAW 344 (374)
T ss_dssp HHHHHHHHH---CHHHHHHH
T ss_pred HHHHHHHHc---ChHHHHHH
Confidence 999999998 55544433
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.11 E-value=3.3e-09 Score=103.40 Aligned_cols=136 Identities=12% Similarity=0.059 Sum_probs=83.8
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCCCCcccccccCchhHHHHhc-CCCcEeecccc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRME-GKGLIIRGWAP 358 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~vp 358 (487)
+++.++++.|...... +.+..+++++..+ +.++++ +.+.. .. +-+.+.+... .+++.+.++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~----~~----~~~~~~~~~~~~~~v~~~g~~~ 272 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMN----PV----VRETANDILGDYGRIHLIEPLD 272 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSC----HH----HHHHHHHHHTTCTTEEEECCCC
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCC----HH----HHHHHHHHhhccCCEEEeCCCC
Confidence 3457777877654321 3456666776543 344443 33221 11 1112222112 36899977776
Q ss_pred h---HhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHH
Q 046605 359 Q---VLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 359 ~---~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
+ ..++..+++ +|+.. .+.+.||+++|+|+|+.......+ .++ ..|.|+.+. . +.++|.
T Consensus 273 ~~~~~~~~~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~~----e~v-~~g~g~~v~----------~-d~~~la 333 (375)
T 3beo_A 273 VIDFHNVAARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTERP----EGI-EAGTLKLAG----------T-DEETIF 333 (375)
T ss_dssp HHHHHHHHHTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSCH----HHH-HTTSEEECC----------S-CHHHHH
T ss_pred HHHHHHHHHhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCCc----eee-cCCceEEcC----------C-CHHHHH
Confidence 4 467888888 88876 355889999999999885433332 343 567777663 3 789999
Q ss_pred HHHHHHhcCchHHHHHHH
Q 046605 436 KAVNEIMMGDRAEEMRSR 453 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~ 453 (487)
++|.++++ |++.+++
T Consensus 334 ~~i~~ll~---~~~~~~~ 348 (375)
T 3beo_A 334 SLADELLS---DKEAHDK 348 (375)
T ss_dssp HHHHHHHH---CHHHHHH
T ss_pred HHHHHHHh---ChHhHhh
Confidence 99999998 5555443
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.08 E-value=4.6e-09 Score=101.08 Aligned_cols=127 Identities=16% Similarity=0.135 Sum_probs=82.3
Q ss_pred EEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchH---hhhcc
Q 046605 289 VYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQV---LILDH 365 (487)
Q Consensus 289 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~---~ll~~ 365 (487)
+++..|+.. +.+....++++++.++.+++++-.+... +.+ +.+..+.. +++.+.+|+++. +++..
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~----~~l-----~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEP----EYF-----DEITRRYG-STVEPIGEVGGERRLDLLAS 231 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCH----HHH-----HHHHHHHT-TTEEECCCCCHHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccH----HHH-----HHHHHHhC-CCEEEeccCCHHHHHHHHHh
Confidence 455567765 3455677778888777776665433210 111 12222222 799999999975 68888
Q ss_pred cCccccccc------------cCchhHHHHhhcCCcEeccCccccchhhHHHHHHH--hhceEeecccccccccCCccCH
Q 046605 366 EAVGGFVTH------------CGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEV--LKIGIGVGIQKWCRIVGDFVKR 431 (487)
Q Consensus 366 ~~~~~~I~H------------GG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~--~G~G~~l~~~~~~~~~~~~~~~ 431 (487)
+++-++-+. |-..++.||+++|+|+|+... ......+ +. -+.|+.+ . . +.
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~--------~-d~ 295 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D--------F-AP 295 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C--------C-CH
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C--------C-CH
Confidence 888222222 334589999999999999875 3455555 34 3455544 3 5 89
Q ss_pred HHHHHHHHHHhc
Q 046605 432 EAIVKAVNEIMM 443 (487)
Q Consensus 432 ~~l~~~i~~ll~ 443 (487)
+++.++|.++++
T Consensus 296 ~~l~~~i~~l~~ 307 (342)
T 2iuy_A 296 DEARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHHTSCC
T ss_pred HHHHHHHHHHHH
Confidence 999999999885
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.03 E-value=3.8e-08 Score=97.37 Aligned_cols=82 Identities=12% Similarity=-0.033 Sum_probs=58.9
Q ss_pred CCCcEeecccc---h---HhhhcccCccccccc----cCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeec
Q 046605 348 GKGLIIRGWAP---Q---VLILDHEAVGGFVTH----CGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVG 417 (487)
Q Consensus 348 ~~nv~~~~~vp---~---~~ll~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 417 (487)
.++|.+.+|++ + .+++..+++ +|.- |...++.||+++|+|+|+.+. ..+...+ +.-+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE-
Confidence 47899988776 2 447777887 5543 346689999999999999764 3455555 354567665
Q ss_pred ccccccccCCccCHHHHHHHHHHHhcCchHHHHH
Q 046605 418 IQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMR 451 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 451 (487)
. +.+++.++|.++++ |++.+
T Consensus 364 ----------~-d~~~la~~i~~ll~---~~~~~ 383 (416)
T 2x6q_A 364 ----------R-DANEAVEVVLYLLK---HPEVS 383 (416)
T ss_dssp ----------S-SHHHHHHHHHHHHH---CHHHH
T ss_pred ----------C-CHHHHHHHHHHHHh---CHHHH
Confidence 3 67899999999997 55543
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.78 E-value=7.7e-08 Score=93.71 Aligned_cols=127 Identities=16% Similarity=0.062 Sum_probs=82.6
Q ss_pred CcEEEEeccCcccC-CHHHHHHHHHHHHhc----CCcEEEEecCCCCCCCcccccccCchhHHHH---h-cCCCcEeecc
Q 046605 286 NSVVYICFGSVANF-TSAQLMEIAMGLEAS----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKR---M-EGKGLIIRGW 356 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~-~~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~~~~~ 356 (487)
++.|+++.|..... ..+.+..+++++..+ +.++|+..... +-+.+.+. . ..+|+.+.+.
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~------------~~~~l~~~~~~~~~~~~v~l~~~ 270 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR------------TKKRLEDLEGFKELGDKIRFLPA 270 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH------------HHHHHHTSGGGGGTGGGEEECCC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH------------HHHHHHHHHHHhcCCCCEEEEcC
Confidence 55888988875432 235566777777653 56777754321 11111111 1 1357887665
Q ss_pred cc---hHhhhcccCccccccccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHH
Q 046605 357 AP---QVLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREA 433 (487)
Q Consensus 357 vp---~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~ 433 (487)
++ ...+++++++ +|+-.|. .+.||.+.|+|+|+++...+.+. .+ +.|.++.+. .++++
T Consensus 271 lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v-~~G~~~lv~-----------~d~~~ 331 (385)
T 4hwg_A 271 FSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GM-DAGTLIMSG-----------FKAER 331 (385)
T ss_dssp CCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HH-HHTCCEECC-----------SSHHH
T ss_pred CCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hh-hcCceEEcC-----------CCHHH
Confidence 55 4568888888 8988775 46999999999999987554332 23 568765542 47899
Q ss_pred HHHHHHHHhc
Q 046605 434 IVKAVNEIMM 443 (487)
Q Consensus 434 l~~~i~~ll~ 443 (487)
|.+++.++++
T Consensus 332 i~~ai~~ll~ 341 (385)
T 4hwg_A 332 VLQAVKTITE 341 (385)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999997
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.60 E-value=2e-06 Score=90.95 Aligned_cols=135 Identities=11% Similarity=0.092 Sum_probs=77.3
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCC-CCcccccccCchhHHH---Hhc-CCCcEeec-
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNN-GGEEEKEDWLPEGFEK---RME-GKGLIIRG- 355 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~-~~~~~~~~~lp~~~~~---~~~-~~nv~~~~- 355 (487)
..+++..|.... .+.+..+++|+..+ +.+++++-++.... .+.+... .-+.+.. +.. .++|.+.+
T Consensus 572 ~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~--~~~~L~~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 572 KPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKA--EMKKMYDLIEEYKLNGQFRWISS 647 (816)
T ss_dssp SCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHH--HHHHHHHHHHHTTCBBBEEEECC
T ss_pred CeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHH--HHHHHHHHHHHcCCCCcEEEccC
Confidence 356777787653 44566666666654 34555554433100 0000000 0011111 111 46788887
Q ss_pred ---ccchHhhhc----ccCcccccc----ccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccc
Q 046605 356 ---WAPQVLILD----HEAVGGFVT----HCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRI 424 (487)
Q Consensus 356 ---~vp~~~ll~----~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~ 424 (487)
++++.++.. .+++ ||. -|-..++.||+++|+|+|+- |-......+ +.-+.|+.++.
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p------ 714 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDP------ 714 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECT------
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCC------
Confidence 444455544 3455 552 34456999999999999985 445555555 45567888764
Q ss_pred cCCccCHHHHHHHHHHHh
Q 046605 425 VGDFVKREAIVKAVNEIM 442 (487)
Q Consensus 425 ~~~~~~~~~l~~~i~~ll 442 (487)
-+.+++.++|.+++
T Consensus 715 ----~D~e~LA~aI~~lL 728 (816)
T 3s28_A 715 ----YHGDQAADTLADFF 728 (816)
T ss_dssp ----TSHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHH
Confidence 48899999997776
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.56 E-value=1.7e-05 Score=77.94 Aligned_cols=140 Identities=14% Similarity=0.100 Sum_probs=79.5
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhc-----CCcEEEEecCCCCCCCcccccccCchhHHHHhc-CCC-------cE
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEAS-----GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRME-GKG-------LI 352 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~n-------v~ 352 (487)
+..+++..|.... .+.+..+++|+..+ +.+++++-.+..... ..+...+ ..+..+.. .++ +.
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~--~~l~~~~-~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESK--FDLHSIA-LRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCS--CCHHHHH-HHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccch--hhHHHHH-HHHHHHcCcccccccccceee
Confidence 3477788888653 33445555555442 567666655443210 0000101 11111122 222 66
Q ss_pred eecccchH---hhhcccCccccc----cccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhc-------------
Q 046605 353 IRGWAPQV---LILDHEAVGGFV----THCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKI------------- 412 (487)
Q Consensus 353 ~~~~vp~~---~ll~~~~~~~~I----~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~------------- 412 (487)
+.+|+++. +++..+++ +| .-|...++.||+++|+|+|+-.. ......+ ..|.
T Consensus 258 ~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v--~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 258 NRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF--SGDCVYKIKPSAWISVD 329 (413)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS--CTTTSEEECCCEEEECT
T ss_pred ccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH--ccCcccccccccccccc
Confidence 77999843 46777887 55 23445589999999999998553 3334333 2233
Q ss_pred ---eE--eecccccccccCCccCHHHHHHHHHHHhcCchHHHHHH
Q 046605 413 ---GI--GVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRS 452 (487)
Q Consensus 413 ---G~--~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 452 (487)
|+ .+. .-+.++|.++| ++++ +++.++
T Consensus 330 ~~~G~~gl~~----------~~d~~~la~~i-~l~~---~~~~~~ 360 (413)
T 3oy2_A 330 DRDGIGGIEG----------IIDVDDLVEAF-TFFK---DEKNRK 360 (413)
T ss_dssp TTCSSCCEEE----------ECCHHHHHHHH-HHTT---SHHHHH
T ss_pred cccCcceeeC----------CCCHHHHHHHH-HHhc---CHHHHH
Confidence 44 443 24899999999 9998 555443
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.51 E-value=4.8e-06 Score=83.93 Aligned_cols=126 Identities=10% Similarity=0.020 Sum_probs=77.0
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHh---cCCcEEEEecCCCCCCCcccccccCchhHHHHh--cCCCcE-eecccch--
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEA---SGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM--EGKGLI-IRGWAPQ-- 359 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~-~~~~vp~-- 359 (487)
.+++..|.... .+.+..+++|+.. .+.+++++-.+.. . +-+.++... .++++. +.++...
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~------~----~~~~l~~~~~~~~~~v~~~~g~~~~~~ 359 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDV------A----LEGALLAAASRHHGRVGVAIGYNEPLS 359 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCH------H----HHHHHHHHHHHTTTTEEEEESCCHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCch------H----HHHHHHHHHHhCCCcEEEecCCCHHHH
Confidence 47777888764 3334444444443 3666666544321 1 111222211 136787 6777333
Q ss_pred HhhhcccCccccc----cccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHh---------hceEeecccccccccC
Q 046605 360 VLILDHEAVGGFV----THCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVL---------KIGIGVGIQKWCRIVG 426 (487)
Q Consensus 360 ~~ll~~~~~~~~I----~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~---------G~G~~l~~~~~~~~~~ 426 (487)
..++..+++ +| .-|...++.||+++|+|+|+... ......+ +.- +.|..+..
T Consensus 360 ~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-------- 424 (485)
T 1rzu_A 360 HLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP-------- 424 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS--------
T ss_pred HHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC--------
Confidence 357888888 55 23445689999999999999664 3444444 232 57777754
Q ss_pred CccCHHHHHHHHHHHh
Q 046605 427 DFVKREAIVKAVNEIM 442 (487)
Q Consensus 427 ~~~~~~~l~~~i~~ll 442 (487)
-+.++|.++|.+++
T Consensus 425 --~d~~~la~~i~~ll 438 (485)
T 1rzu_A 425 --VTLDGLKQAIRRTV 438 (485)
T ss_dssp --CSHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHH
Confidence 47899999999999
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.43 E-value=2.3e-05 Score=78.83 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=76.8
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhc---CCcEEEEecCCCCCCCcccccccCchhHHHHh--cCCCcE-eecccch--
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEAS---GQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM--EGKGLI-IRGWAPQ-- 359 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~-~~~~vp~-- 359 (487)
.+++..|.... .+.+..+++|++.+ +.+++++-.+.. . +-+.++... .++++. +.++...
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~------~----~~~~l~~~~~~~~~~v~~~~g~~~~~~ 360 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP------V----LQEGFLAAAAEYPGQVGVQIGYHEAFS 360 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH------H----HHHHHHHHHHHSTTTEEEEESCCHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch------H----HHHHHHHHHHhCCCcEEEeCCCCHHHH
Confidence 56667777653 33344555555543 666666544321 0 111222211 136785 6777433
Q ss_pred HhhhcccCcccccc----ccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHh---------hceEeecccccccccC
Q 046605 360 VLILDHEAVGGFVT----HCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVL---------KIGIGVGIQKWCRIVG 426 (487)
Q Consensus 360 ~~ll~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~---------G~G~~l~~~~~~~~~~ 426 (487)
..++..+++ +|. -|...++.||+++|+|+|+... ......+ +.- +.|..+..
T Consensus 361 ~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-------- 425 (485)
T 2qzs_A 361 HRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED-------- 425 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS--------
T ss_pred HHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC--------
Confidence 367888888 552 2445688999999999998754 3444444 232 57777754
Q ss_pred CccCHHHHHHHHHHHh
Q 046605 427 DFVKREAIVKAVNEIM 442 (487)
Q Consensus 427 ~~~~~~~l~~~i~~ll 442 (487)
-+.++|.++|.+++
T Consensus 426 --~d~~~la~~i~~ll 439 (485)
T 2qzs_A 426 --SNAWSLLRAIRRAF 439 (485)
T ss_dssp --SSHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHH
Confidence 48999999999999
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.38 E-value=0.00041 Score=71.21 Aligned_cols=88 Identities=13% Similarity=0.099 Sum_probs=61.1
Q ss_pred CCcEeecccch---HhhhcccCccccc---cccCchhHHHHhhcCCcEeccCccccchhh-HHHHHHHhhceEeeccccc
Q 046605 349 KGLIIRGWAPQ---VLILDHEAVGGFV---THCGWNSILEGVTAGVPLVTWPVYAEQFYN-EKIVNEVLKIGIGVGIQKW 421 (487)
Q Consensus 349 ~nv~~~~~vp~---~~ll~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~-a~rv~~~~G~G~~l~~~~~ 421 (487)
++|.+.+++|+ ..++..+++ || ..|+..++.||+++|+|+|++|...=.... +..+ +..|+...+ .
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v--~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMN--V-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGB--C--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhh--c--
Confidence 67999999984 356888887 54 126777999999999999998743111111 3445 455665433 2
Q ss_pred ccccCCccCHHHHHHHHHHHhcCchHHHHHHH
Q 046605 422 CRIVGDFVKREAIVKAVNEIMMGDRAEEMRSR 453 (487)
Q Consensus 422 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 453 (487)
-+.+++.+++.++++ |++.+++
T Consensus 507 -------~~~~~la~~i~~l~~---~~~~~~~ 528 (568)
T 2vsy_A 507 -------ADDAAFVAKAVALAS---DPAALTA 528 (568)
T ss_dssp -------SSHHHHHHHHHHHHH---CHHHHHH
T ss_pred -------CCHHHHHHHHHHHhc---CHHHHHH
Confidence 288999999999998 5554443
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.37 E-value=1.6e-06 Score=74.56 Aligned_cols=140 Identities=9% Similarity=0.036 Sum_probs=90.8
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhc-CCcEEEEecCCCCCCCcccccccCchhHH--HHhcCCCcEeecccch---Hh
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEAS-GQNFIWVVRKNKNNGGEEEKEDWLPEGFE--KRMEGKGLIIRGWAPQ---VL 361 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~~~~~vp~---~~ 361 (487)
.+++..|+.. ..+....++++++.+ +.+++++-.+... +. +-+... ...-.+|+.+.+|+++ ..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~----~~----l~~~~~~~~~~l~~~v~~~g~~~~~e~~~ 93 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKG----DH----AERYARKIMKIAPDNVKFLGSVSEEELID 93 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTT----ST----HHHHHHHHHHHSCTTEEEEESCCHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccH----HH----HHHHHHhhhcccCCcEEEeCCCCHHHHHH
Confidence 4556677765 345577778888877 5566655433321 11 111111 1112468999999997 56
Q ss_pred hhcccCcccccc---ccC-chhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHH
Q 046605 362 ILDHEAVGGFVT---HCG-WNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKA 437 (487)
Q Consensus 362 ll~~~~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~ 437 (487)
++..+++ +|. +.| ..++.||+++|+|+|+... ......+ +..+.|+.+ . -+.+++.++
T Consensus 94 ~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~----------~d~~~l~~~ 155 (177)
T 2f9f_A 94 LYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N----------ADVNEIIDA 155 (177)
T ss_dssp HHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C----------SCHHHHHHH
T ss_pred HHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C----------CCHHHHHHH
Confidence 8888888 554 334 4599999999999998753 4555555 455678877 4 378999999
Q ss_pred HHHHhcCchHHHH-HHHHHHHH
Q 046605 438 VNEIMMGDRAEEM-RSRAKAFG 458 (487)
Q Consensus 438 i~~ll~~~~~~~~-~~~a~~l~ 458 (487)
|.++++ ++.. ++++++.+
T Consensus 156 i~~l~~---~~~~~~~~~~~~a 174 (177)
T 2f9f_A 156 MKKVSK---NPDKFKKDCFRRA 174 (177)
T ss_dssp HHHHHH---CTTTTHHHHHHHH
T ss_pred HHHHHh---CHHHHHHHHHHHH
Confidence 999997 3333 55554443
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.17 E-value=0.00038 Score=67.36 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=66.2
Q ss_pred CcEeecccch-HhhhcccCcccccc-----ccCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeeccccccc
Q 046605 350 GLIIRGWAPQ-VLILDHEAVGGFVT-----HCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCR 423 (487)
Q Consensus 350 nv~~~~~vp~-~~ll~~~~~~~~I~-----HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~ 423 (487)
++.+.++..+ ..++..+++ ++. -+|..++.||+++|+|+|+-|...+.......+ ...|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--C----
Confidence 4566565443 568888887 443 134578999999999999877777777766655 355665543 2
Q ss_pred ccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 046605 424 IVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAK 462 (487)
Q Consensus 424 ~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 462 (487)
+.++|.++|.++++.+.-..|.+++++..+.-.
T Consensus 332 ------d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 ------NETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp ------SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 678999999999972112346666666655544
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.15 E-value=0.0005 Score=67.36 Aligned_cols=75 Identities=13% Similarity=0.032 Sum_probs=55.4
Q ss_pred CCCcEeecccchH---hhhcccCcccccc-c-cCchhHHHHh-------hcCCcEeccCccccchhhHHHHHHHhhceEe
Q 046605 348 GKGLIIRGWAPQV---LILDHEAVGGFVT-H-CGWNSILEGV-------TAGVPLVTWPVYAEQFYNEKIVNEVLKIGIG 415 (487)
Q Consensus 348 ~~nv~~~~~vp~~---~ll~~~~~~~~I~-H-GG~gs~~eal-------~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~ 415 (487)
.+||.+.+++|+. +++..+++-++-+ . |-..++.||+ ++|+|+|+-.. + +.-..|..
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEE
Confidence 4689999999864 4677888732212 2 3345789999 99999999764 5 35456776
Q ss_pred -ecccccccccCCccCHHHHHHHHHHHhc
Q 046605 416 -VGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 416 -l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
+.. -+.++|.++|.++++
T Consensus 333 ~v~~----------~d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 333 GYTP----------GNADSVIAAITQALE 351 (406)
T ss_dssp EECT----------TCHHHHHHHHHHHHH
T ss_pred EeCC----------CCHHHHHHHHHHHHh
Confidence 554 489999999999997
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.91 E-value=0.00036 Score=68.48 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=56.2
Q ss_pred CCcEeecccchH---hhhcccCcccccc--c--cCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeeccccc
Q 046605 349 KGLIIRGWAPQV---LILDHEAVGGFVT--H--CGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKW 421 (487)
Q Consensus 349 ~nv~~~~~vp~~---~ll~~~~~~~~I~--H--GG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 421 (487)
+++.+.+++|+. +++..+++ ||. . |=..++.||+++|+|+|+ -..+ ....+ +.-..|+.+..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC---
Confidence 578899999864 46777888 553 2 223468999999999998 3222 12233 34346777754
Q ss_pred ccccCCccCHHHHHHHHHHHhcCchHHHHHHH
Q 046605 422 CRIVGDFVKREAIVKAVNEIMMGDRAEEMRSR 453 (487)
Q Consensus 422 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 453 (487)
-++++|.++|.++++ |++.+++
T Consensus 364 -------~d~~~la~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 364 -------LNPENIAETLVELCM---SFNNRDV 385 (413)
T ss_dssp -------CSHHHHHHHHHHHHH---HTC----
T ss_pred -------CCHHHHHHHHHHHHc---CHHHHHH
Confidence 489999999999998 6665554
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.68 E-value=0.0011 Score=69.88 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=91.1
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHh-----cCCCcEeecccch
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRM-----EGKGLIIRGWAPQ 359 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~nv~~~~~vp~ 359 (487)
+..+||.+|......+++.+..+++.|++.+--++|........ -+.+.... ..+.+++.+..|.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~----------~~~l~~~~~~~gi~~~r~~f~~~~~~ 590 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG----------EPNIQQYAQNMGLPQNRIIFSPVAPK 590 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG----------HHHHHHHHHHTTCCGGGEEEEECCCH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH----------HHHHHHHHHhcCCCcCeEEECCCCCH
Confidence 45699999999888999999999999999999999988765421 11222221 2456888888886
Q ss_pred Hh---hhcccCccc-cccccCchhHHHHhhcCCcEeccCccccc---hhhHHHHHHHhhceEeecccccccccCCccCHH
Q 046605 360 VL---ILDHEAVGG-FVTHCGWNSILEGVTAGVPLVTWPVYAEQ---FYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKRE 432 (487)
Q Consensus 360 ~~---ll~~~~~~~-~I~HGG~gs~~eal~~GvP~l~~P~~~DQ---~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~ 432 (487)
.+ .+...++-| -...+|.+|+.|||+.|||+|+++ +++ ..-+..+ ..+|+.-.+ .-+.+
T Consensus 591 ~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l-~~~gl~e~i-----------a~~~~ 656 (723)
T 4gyw_A 591 EEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQL-TCLGCLELI-----------AKNRQ 656 (723)
T ss_dssp HHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHH-HHHTCGGGB-----------CSSHH
T ss_pred HHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHH-HHcCCcccc-----------cCCHH
Confidence 55 444466521 234789999999999999999999 333 2223444 456665433 23555
Q ss_pred HHHHHHHHHhc
Q 046605 433 AIVKAVNEIMM 443 (487)
Q Consensus 433 ~l~~~i~~ll~ 443 (487)
+-.+.--++-+
T Consensus 657 ~Y~~~a~~la~ 667 (723)
T 4gyw_A 657 EYEDIAVKLGT 667 (723)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 55555445554
No 50
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.39 E-value=0.0074 Score=57.59 Aligned_cols=106 Identities=9% Similarity=0.074 Sum_probs=73.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCccee-EEEeeCCCccCCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRSIQKASELGIELD-VKIIKFPSAEAGLPEG 81 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~-~~~i~~~~~~~~~~~~ 81 (487)
.+++||+|+-....|++.-..++.++|.++ +.+|++++.+.+.+.++.. ..++ ++.++. .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~--------~- 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDK--------K- 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECC--------S-
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCc--------c-
Confidence 567899999999999999999999999988 9999999999887777654 2343 444421 0
Q ss_pred CcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCC-CEEEeCCCCcchHHHHHHhCCCeEE
Q 046605 82 WENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKP-DCLVADMFFPWATDAAAKFGIPRLV 145 (487)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~p-DlVI~D~~~~~~~~~A~~~giP~v~ 145 (487)
. . ...+..+ ..+.+.++..++ |++|.=....-...++...|+|..+
T Consensus 69 --~-----~---~~~~~~~--------~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --G-----R---HNSISGL--------NEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --S-----H---HHHHHHH--------HHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --c-----c---cccHHHH--------HHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 0 0111111 123445566799 9999765555455678888998654
No 51
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.34 E-value=0.0027 Score=53.15 Aligned_cols=126 Identities=10% Similarity=0.110 Sum_probs=74.6
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCC--cEEEEecCCCCCCCcccccccCchhHHHHhc--CCCcEeecccchH--
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQ--NFIWVVRKNKNNGGEEEKEDWLPEGFEKRME--GKGLIIRGWAPQV-- 360 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~~~~~vp~~-- 360 (487)
+++++..|+... .+....+++++..+.. ++-+.+-+... ..+.+....+ +.++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~----------~~~~~~~~~~~~~~~v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP----------DEKKIKLLAQKLGVKAEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST----------THHHHHHHHHHHTCEEEC-CCCCHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc----------cHHHHHHHHHHcCCeEEE-eecCHHHH
Confidence 467788888753 4556677777776531 33333333221 1112222111 237888 999864
Q ss_pred -hhhcccCcccccc----ccCchhHHHHhhcCC-cEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHH
Q 046605 361 -LILDHEAVGGFVT----HCGWNSILEGVTAGV-PLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAI 434 (487)
Q Consensus 361 -~ll~~~~~~~~I~----HGG~gs~~eal~~Gv-P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l 434 (487)
.++..+++ +|. -|...++.||+++|+ |+|+-...+. ....+ +..+. .+. .-+.+++
T Consensus 69 ~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~~----------~~~~~~l 130 (166)
T 3qhp_A 69 LEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LFE----------PNNAKDL 130 (166)
T ss_dssp HHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EEC----------TTCHHHH
T ss_pred HHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EEc----------CCCHHHH
Confidence 47777887 554 344569999999996 9999332221 12122 22222 222 3589999
Q ss_pred HHHHHHHhc
Q 046605 435 VKAVNEIMM 443 (487)
Q Consensus 435 ~~~i~~ll~ 443 (487)
.++|.++++
T Consensus 131 ~~~i~~l~~ 139 (166)
T 3qhp_A 131 SAKIDWWLE 139 (166)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999998
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.24 E-value=0.0029 Score=64.07 Aligned_cols=145 Identities=12% Similarity=-0.000 Sum_probs=91.4
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEe--cCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhh--
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVV--RKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLI-- 362 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~l-- 362 (487)
.++|.+|+......++.+..+.+.+.+.+..++|.. +.... ....+-..+....-.+.+++.+.+|..+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g------~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG------ITHPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG------GGHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch------hhHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 588999998888889999999999999888877743 32211 00001111111111357888888886654
Q ss_pred -hcccCcccc-ccccCchhHHHHhhcCCcEeccCccccchhhHHHHH----HHhhceEeecccccccccCCccCHHHHHH
Q 046605 363 -LDHEAVGGF-VTHCGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVN----EVLKIGIGVGIQKWCRIVGDFVKREAIVK 436 (487)
Q Consensus 363 -l~~~~~~~~-I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~----~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ 436 (487)
+..+++-+- ...+|..|+.|||+.|||+|+++- ++. +.|+. ...|+.-.+- .-+.++..+
T Consensus 515 ~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G--~~~--asRvgaSlL~~~GLpE~LI----------A~d~eeYv~ 580 (631)
T 3q3e_A 515 ILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTG--AEV--HEHIDEGLFKRLGLPEWLI----------ANTVDEYVE 580 (631)
T ss_dssp HHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECC--SSH--HHHHHHHHHHHTTCCGGGE----------ESSHHHHHH
T ss_pred HHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccC--CcH--HHHhHHHHHHhcCCCccee----------cCCHHHHHH
Confidence 466776331 234788999999999999999983 332 33331 2344432111 246788888
Q ss_pred HHHHHhcCchHHHHHHHH
Q 046605 437 AVNEIMMGDRAEEMRSRA 454 (487)
Q Consensus 437 ~i~~ll~~~~~~~~~~~a 454 (487)
..-++.+ |++.+++.
T Consensus 581 ~Av~La~---D~~~l~~L 595 (631)
T 3q3e_A 581 RAVRLAE---NHQERLEL 595 (631)
T ss_dssp HHHHHHH---CHHHHHHH
T ss_pred HHHHHhC---CHHHHHHH
Confidence 8878887 66655443
No 53
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.22 E-value=0.00098 Score=63.30 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=82.1
Q ss_pred CcEeecccchHhh---hcccCccccccccCc---------hhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeec
Q 046605 350 GLIIRGWAPQVLI---LDHEAVGGFVTHCGW---------NSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVG 417 (487)
Q Consensus 350 nv~~~~~vp~~~l---l~~~~~~~~I~HGG~---------gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 417 (487)
||...+|+|+.++ |+.++..++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 8999999998765 444556555533333 34789999999999744 56777788 6999999873
Q ss_pred ccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 046605 418 IQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSSNLNSLIEDL 482 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l 482 (487)
+.+++.+++.++.. +.-..|++||++.+++++ .|.....++.+.+.+|
T Consensus 290 ------------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ------------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp ------------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 35788888888654 334678889998888877 6777777777777665
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.03 E-value=0.02 Score=54.37 Aligned_cols=103 Identities=18% Similarity=0.121 Sum_probs=66.3
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCcce-eEEEeeCCCccCCCCCCCcc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRSIQKASELGIEL-DVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i-~~~~i~~~~~~~~~~~~~~~ 84 (487)
|||+++.....|++.-..++.++|.++ +.+|++++.+.+.+.++.. ..+ +++.++. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~-------~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPL-------GHG--- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecC-------Ccc---
Confidence 589999988889999999999999987 9999999998665544432 123 2332210 000
Q ss_pred cccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEE
Q 046605 85 LDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLV 145 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~ 145 (487)
...+. ....+.+.+++.++|+||.=....-...++...|+|...
T Consensus 63 ---------~~~~~--------~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 63 ---------ALEIG--------ERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----------CHH--------HHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---------ccchH--------HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 00000 012455667778999998333334455678888999743
No 55
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.54 E-value=0.078 Score=45.50 Aligned_cols=76 Identities=12% Similarity=0.008 Sum_probs=54.7
Q ss_pred CcEe-ecccch---HhhhcccCccccccc----cCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeeccccc
Q 046605 350 GLII-RGWAPQ---VLILDHEAVGGFVTH----CGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKW 421 (487)
Q Consensus 350 nv~~-~~~vp~---~~ll~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~ 421 (487)
++.+ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+.... .....+ ..+.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---
Confidence 8999 999984 457888887 5532 3356899999999999987542 223222 3356776653
Q ss_pred ccccCCccCHHHHHHHHHHHhc
Q 046605 422 CRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 422 ~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
-+.+++.++|.++++
T Consensus 165 -------~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 165 -------GDPGELANAILKALE 179 (200)
T ss_dssp -------TCHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHh
Confidence 488999999999984
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.55 E-value=0.24 Score=46.41 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=40.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhh
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~ 53 (487)
|||+++-....|++.-..++.++|+++ +.+|++++.+.+.+.++..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 589999999999999999999999988 9999999998776665543
No 57
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=94.34 E-value=0.25 Score=44.14 Aligned_cols=114 Identities=15% Similarity=0.253 Sum_probs=64.6
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcccc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENLD 86 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~ 86 (487)
|+|||+..--+. +---+..|+++|.+.| +|+++.+...+.-+..... ....+++..+.... ....+
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT----~~~pl~~~~~~~~~--------~~~v~ 66 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDTDF--------YTVID 66 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEETTE--------EEETT
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC----CCCCceeEEeeccc--------eeecC
Confidence 678888874443 2234778999999999 5999888766544433211 12234554443110 00011
Q ss_pred cchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEe----------CCCCc---chHHHHHHhCCCeEEEec
Q 046605 87 AITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVA----------DMFFP---WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~----------D~~~~---~~~~~A~~~giP~v~~~~ 148 (487)
..+. +.. .-.+..++...+||+||+ |.++. +|..=|..+|+|.|.+|.
T Consensus 67 GTPa----DCV----------~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 67 GTPA----DCV----------HLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCHH----HHH----------HHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CChH----HHH----------hhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 1111 221 114455666779999997 32222 345557778999999974
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=92.92 E-value=0.6 Score=41.44 Aligned_cols=114 Identities=14% Similarity=0.224 Sum_probs=65.6
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcccc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENLD 86 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~ 86 (487)
|||||+..--+. |---+..|+++|.+.| +|+++.+...+.-+..... ....+++..+... .. -..+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit----~~~pl~~~~~~~~-----~~---~~v~ 66 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----FTEPLKMRKIDTD-----FY---TVID 66 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----CSSCEEEEEEETT-----EE---EETT
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcccee----cCCCeEEEEecCC-----Ce---EEEC
Confidence 478998875544 3445889999999988 9999999876655443311 1224555554310 00 0001
Q ss_pred cchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeC----------CCCc---chHHHHHHhCCCeEEEec
Q 046605 87 AITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVAD----------MFFP---WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D----------~~~~---~~~~~A~~~giP~v~~~~ 148 (487)
..+. +... -.+..++...+||+||+- .++. ++..-|..+|||.|.+|.
T Consensus 67 GTPa----DCV~----------lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 67 GTPA----DCVH----------LGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCHH----HHHH----------HHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHH----HHHH----------HHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 1111 2211 134444544689999963 2222 234457778999999975
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.72 E-value=0.95 Score=45.61 Aligned_cols=137 Identities=11% Similarity=-0.009 Sum_probs=74.4
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHh---cCCcEEEEecCCCCCCCcccccccCchhHHH--HhcCCCcEeecccchH--
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEA---SGQNFIWVVRKNKNNGGEEEKEDWLPEGFEK--RMEGKGLIIRGWAPQV-- 360 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~nv~~~~~vp~~-- 360 (487)
++++..|.... .+.+..+++|+.+ .+.++++...+... ....+.. ...+.++.+....+..
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKK----------FEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHH----------HHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCch----------HHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 56666676653 3445555566554 46676666544321 1111111 1125678777777753
Q ss_pred -hhhcccCccccccc----cCchhHHHHhhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHH
Q 046605 361 -LILDHEAVGGFVTH----CGWNSILEGVTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 361 -~ll~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
.+++.+++ ||.= |=..++.||+++|+|+|+-.. ......| +.-.-|.......-+-..-...+.++|.
T Consensus 396 ~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 396 HLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEECCCCHHHHH
Confidence 46777887 5532 223489999999999998654 3334444 2333343222110000000024678999
Q ss_pred HHHHHHhc
Q 046605 436 KAVNEIMM 443 (487)
Q Consensus 436 ~~i~~ll~ 443 (487)
++|++++.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 60
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=89.13 E-value=3.5 Score=35.77 Aligned_cols=107 Identities=9% Similarity=0.066 Sum_probs=58.9
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCC--eEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGV--KASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 84 (487)
|+||+|+..++. .-+.++.++|.+.+| +|..+.+..-...+...-. ..++.+..++. ...
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~-- 62 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCK-----KHNVECKVIQR--------KEF-- 62 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHH-----HHTCCEEECCG--------GGS--
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHH-----HcCCCEEEeCc--------ccc--
Confidence 478998876654 347778888888888 7655544321111111100 12566655421 000
Q ss_pred cccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEec
Q 046605 85 LDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~ 148 (487)
.. ... ..+++.+.+++.+||+||+-.+ ......+-..+...++-+++
T Consensus 63 ----~~---r~~----------~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 63 ----PS---KKE----------FEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp ----SS---HHH----------HHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred ----cc---hhh----------hhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 01 111 1235667788889999887655 33444455555566777754
No 61
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=88.83 E-value=5.1 Score=35.07 Aligned_cols=110 Identities=11% Similarity=-0.023 Sum_probs=62.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGW 82 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~ 82 (487)
.+|+||+|+..++. ..+.++.++|.+. +++|..+.+..-...+... . ...++.+..++. ...
T Consensus 20 ~~~~rI~~l~SG~g---~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~---A--~~~gIp~~~~~~--------~~~ 83 (229)
T 3auf_A 20 GHMIRIGVLISGSG---TNLQAILDGCREGRIPGRVAVVISDRADAYGLER---A--RRAGVDALHMDP--------AAY 83 (229)
T ss_dssp TTCEEEEEEESSCC---HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHH---H--HHTTCEEEECCG--------GGS
T ss_pred CCCcEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHH---H--HHcCCCEEEECc--------ccc
Confidence 56789999977764 2467788888876 6887665543211111111 0 012566655431 110
Q ss_pred cccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 83 ENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
.. .. ....++.+.+++.+||+||+-.+ -.....+-..+...++-++++
T Consensus 84 ------~~---r~----------~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 ------PS---RT----------AFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ------SS---HH----------HHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ------cc---hh----------hccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 01 11 11235667788889999887665 345555666676777777553
No 62
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=87.56 E-value=5.3 Score=34.51 Aligned_cols=108 Identities=4% Similarity=0.021 Sum_probs=61.2
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 84 (487)
|+||+++-.++.+ .+.++.++|.+. +|+|..+.+..-...+..... ..++.+..++. ...
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~-----~~gIp~~~~~~--------~~~-- 64 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAA-----RENVPAFVFSP--------KDY-- 64 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHH-----HTTCCEEECCG--------GGS--
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHH-----HcCCCEEEeCc--------ccc--
Confidence 5788888777643 366777888877 789876665421111111100 12566655421 000
Q ss_pred cccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 85 LDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
.. ... ...++.+.+++.+||+||+-.+ ......+-..+...++-++++
T Consensus 65 ----~~---~~~----------~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 65 ----PS---KAA----------FESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----SS---HHH----------HHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----cc---hhh----------hHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 01 011 1235667788889999887664 335555667777777777653
No 63
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.47 E-value=0.7 Score=46.61 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=28.8
Q ss_pred CCCC--CCceEEEEEcC---CC--CCCh-HHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASG--ICQLHIFFFPF---LA--HGHM-IPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~--~~~~~Il~~~~---~~--~GH~-~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+.. ...||||+++. |. .|=+ .-.-+|+++|+++||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 5543 56799999973 21 1211 23568999999999999999964
No 64
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=86.10 E-value=7 Score=33.19 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=61.7
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCc------cchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNA------PHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~------~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
+-.|++++..+.|-..-.+.+|...+.+|++|.|+..-... +.+++. +++++....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~--------- 89 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMAT--------- 89 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCT---------
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEccc---------
Confidence 45788888888999999999999999999999999764421 112222 356665531
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCC
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFF 129 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~ 129 (487)
++.. .... .. .-...........++.+.+.++|+||.|-+.
T Consensus 90 gf~~--~~~~---~~---~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 90 GFTW--ETQN---RE---ADTAACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp TCCC--CGGG---HH---HHHHHHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred cccc--CCCC---cH---HHHHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 1111 1111 01 1122223445566777777899999999653
No 65
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=82.82 E-value=5.1 Score=37.31 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=23.3
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+.+|||+|+. --+-...+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3458999992 223344577899999999876654
No 66
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=81.52 E-value=7 Score=36.12 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=27.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
++||||+|+-.+..+ +...++|.++||+|..+.+.+
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 578999999888654 345678888999988776643
No 67
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=81.40 E-value=10 Score=33.51 Aligned_cols=57 Identities=9% Similarity=-0.045 Sum_probs=37.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEee
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIK 70 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~ 70 (487)
||||+..--+. |---+..|+++|.+.| +|+++.+...+.-+..... ....+++..++
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT----l~~pl~~~~~~ 57 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAIT----IAHPVRAYPHP 57 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCC----CSSCBEEEECC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----CCCCeEEEEec
Confidence 57777764443 3334889999999888 8999999876655544322 22356666663
No 68
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=81.25 E-value=8.6 Score=34.71 Aligned_cols=114 Identities=16% Similarity=0.143 Sum_probs=63.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENLDA 87 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~~~ 87 (487)
||||+..--+. +---+..|+++|.+.| +|+++.+...+.-+..... ....+++..++.. +. ... ..+.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siT----l~~pl~~~~~~~~----~~-~~~-~v~G 68 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGIT----LHKPLRMYEVDLC----GF-RAI-ATSG 68 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCC----CSSCBCEEEEECS----SS-EEE-EESS
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----CCCCeEEEEeccC----CC-ceE-EECC
Confidence 57887764443 3334889999999988 9999999876655443322 1224556555321 00 000 0111
Q ss_pred chhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeC-----------CCCc---chHHHHHHhCCCeEEEech
Q 046605 88 ITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVAD-----------MFFP---WATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D-----------~~~~---~~~~~A~~~giP~v~~~~~ 149 (487)
.+. +.... .+..+ ..+||+||+- .++. ++..=|..+|||.|.+|..
T Consensus 69 TPa----DCV~l----------al~~l--~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 69 TPS----DTVYL----------ATFGL--GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp CHH----HHHHH----------HHHHH--TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cHH----HHHHH----------HHhcC--CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 111 22211 22333 3689999963 2222 3344467789999999863
No 69
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=80.58 E-value=9.4 Score=33.75 Aligned_cols=114 Identities=13% Similarity=0.157 Sum_probs=62.6
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCC-cccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGW-ENLD 86 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~-~~~~ 86 (487)
||||+..--+. |---+..|+++|.+.| +|+++.+...+.-+..... ....+++..++.. .+. ...-
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT----l~~pl~~~~~~~~-------~~~~~~~v 67 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSIT----IHVPLWMKKVFIS-------ERVVAYST 67 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCC----CSSCCCEEECCCS-------SSEEEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----CCCCeEEEEeccC-------CCCceEEE
Confidence 57777764443 3334889999999888 8999999876655444321 1224555555311 010 0100
Q ss_pred cchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeC----------CCCc---chHHHHHHhCCCeEEEec
Q 046605 87 AITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVAD----------MFFP---WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D----------~~~~---~~~~~A~~~giP~v~~~~ 148 (487)
+... -+.... .+..++ ..+||+||+- .++. ++..=|..+|||.|.+|.
T Consensus 68 ~GTP---aDCV~l----------al~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 68 TGTP---ADCVKL----------AYNVVM-DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp SSCH---HHHHHH----------HHHTTS-TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcH---HHHHHH----------HHHhhc-cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1111 122111 233333 2589999953 2222 344456778999999975
No 70
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=79.41 E-value=21 Score=30.63 Aligned_cols=107 Identities=10% Similarity=0.058 Sum_probs=60.2
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWENL 85 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~~ 85 (487)
+||+|+..+..+ .+.+|.+++.+. +|+|..+.+..-.......- ...++.+..++. ...
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A-----~~~gIp~~~~~~--------~~~--- 61 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA-----RQAGIATHTLIA--------SAF--- 61 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH-----HHTTCEEEECCG--------GGC---
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH-----HHcCCcEEEeCc--------ccc---
Confidence 478887776553 467777777765 68877665543222111110 012566655421 000
Q ss_pred ccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 86 DAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
.. .. ....++.+.+++.+||+||+-.+ ......+-..+...++-++++
T Consensus 62 ---~~---r~----------~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 62 ---DS---RE----------AYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ---SS---HH----------HHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---cc---hh----------hccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 01 11 11235677888899999887765 334555666777777877653
No 71
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=78.93 E-value=31 Score=33.98 Aligned_cols=109 Identities=11% Similarity=0.039 Sum_probs=67.3
Q ss_pred CcEeecccchH---hhhcccCcccccc---ccCch-hHHHHhhcC---CcEeccCccccchhhHHHHHHHhh-ceEeecc
Q 046605 350 GLIIRGWAPQV---LILDHEAVGGFVT---HCGWN-SILEGVTAG---VPLVTWPVYAEQFYNEKIVNEVLK-IGIGVGI 418 (487)
Q Consensus 350 nv~~~~~vp~~---~ll~~~~~~~~I~---HGG~g-s~~eal~~G---vP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~ 418 (487)
.|.....+|+. .++..+++ |+. .=|.| +..|++++| .|+|+-- --..+. .+| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe----~aGa~~----~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSE----TCGAAE----VLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEET----TBTTHH----HHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeC----CCCCHH----HhCCCEEEECC
Confidence 47777778864 45666777 332 45777 568999996 5554332 222232 333 4777764
Q ss_pred cccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhh
Q 046605 419 QKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSSNLNSLIEDLSL 484 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~ 484 (487)
.+.+++.++|.++|+ ....+-+++.+++.+..+ ..+...=.+++++.|..
T Consensus 423 ----------~D~~~lA~AI~~aL~-m~~~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ----------FDLVEQAEAISAALA-AGPRQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ----------TBHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 489999999999997 213345555555555554 24455556777777754
No 72
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=78.80 E-value=12 Score=34.43 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=24.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|++|||+|+-.+.. .....++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 56899999977633 345568888899998877664
No 73
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=77.60 E-value=6.1 Score=37.83 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=27.9
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+++++||+++..+.. .+.+++++.+.|++|+++..+
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 367889999987754 366899999999999999754
No 74
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.48 E-value=1.4 Score=37.93 Aligned_cols=45 Identities=7% Similarity=-0.006 Sum_probs=37.3
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLS 51 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 51 (487)
+++||++.-.|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 46789999888888777 8899999999999999999975544443
No 75
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=76.95 E-value=14 Score=32.79 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=31.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSR 52 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 52 (487)
||||+..--+. |---+..|+++|.+.| +|+++.+...+.-+.+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ 44 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASN 44 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccC
Confidence 68888875444 3345788999998876 9999999876655444
No 76
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.44 E-value=3.4 Score=35.39 Aligned_cols=45 Identities=11% Similarity=-0.040 Sum_probs=36.8
Q ss_pred CCceEEEEEcCCCCCChH-HHHHHHHHHHhCCCeEEEEeCCCCccch
Q 046605 5 ICQLHIFFFPFLAHGHMI-PTVDMAKLFTTRGVKASVITTPGNAPHL 50 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~v 50 (487)
.+++||++.-.|+ +..+ =...+.+.|.++|++|.++.++.....+
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 4567899888887 5555 7899999999999999999998665544
No 77
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=76.31 E-value=2.8 Score=36.10 Aligned_cols=47 Identities=9% Similarity=0.071 Sum_probs=37.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 53 (487)
.+++||++...|+.+-+. ...|.+.|.++| +|.++.++.....+...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 456799999999988766 899999999999 99999998766655543
No 78
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.20 E-value=12 Score=34.91 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=35.5
Q ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCc
Q 046605 6 CQLHIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNA 47 (487)
Q Consensus 6 ~~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 47 (487)
++++|+|++ -|+-|-..-..+||..|+++|++|.++..+...
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 456777775 568899999999999999999999999988543
No 79
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=74.18 E-value=4.8 Score=31.98 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=34.4
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
++.||++.+.+.-.|-....-++..|..+|++|.....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 46789999999999999999999999999999997755
No 80
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=73.46 E-value=9.6 Score=35.75 Aligned_cols=48 Identities=15% Similarity=0.146 Sum_probs=37.9
Q ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 046605 5 ICQLHIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 5 ~~~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 53 (487)
.++.+|+|++ -|+-|-..-..+||..|+++|++|.++..+. ...+...
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 71 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDI 71 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHH
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHH
Confidence 3556676665 5688999999999999999999999999887 3344433
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=72.96 E-value=3.8 Score=34.16 Aligned_cols=45 Identities=4% Similarity=0.006 Sum_probs=36.9
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 53 (487)
+||++.-.|+.|=+. ...+.+.|.++|++|.++.++.-.+.+...
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~ 50 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFINGE 50 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCHH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhHH
Confidence 588888888866665 889999999999999999998777666543
No 82
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=72.95 E-value=33 Score=29.33 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=27.2
Q ss_pred HHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
++.+.+++.+||+||+-.+ ......+-..+...++-++++
T Consensus 70 ~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 70 AIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp HHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred HHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 5667788889999886654 334555556666677777653
No 83
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=72.19 E-value=19 Score=35.12 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=28.2
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEE
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVF 146 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 146 (487)
++++++++.+||+||.+.. ...+|+++|||++.+
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 3556777779999999854 678999999999987
No 84
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=72.13 E-value=24 Score=29.27 Aligned_cols=135 Identities=17% Similarity=0.089 Sum_probs=69.0
Q ss_pred hhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcE
Q 046605 273 EQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLI 352 (487)
Q Consensus 273 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 352 (487)
..++-.+|..++ ..+||-|.. ........++..+.+-++|-+++.... + ++... -....
T Consensus 34 A~~lg~~La~~g---~~lVsGGg~----~Gim~aa~~gAl~~gG~tigVlP~~~~-----~----~~~~~-----~~~~i 92 (176)
T 2iz6_A 34 ANELGKQIATHG---WILLTGGRS----LGVMHEAMKGAKEAGGTTIGVLPGPDT-----S----EISDA-----VDIPI 92 (176)
T ss_dssp HHHHHHHHHHTT---CEEEEECSS----SSHHHHHHHHHHHTTCCEEEEECC--------------CCTT-----CSEEE
T ss_pred HHHHHHHHHHCC---CEEEECCCc----cCHhHHHHHHHHHcCCEEEEEeCchhh-----h----hhccC-----CceeE
Confidence 356666675542 555665541 223444555555556677766654311 1 11100 01234
Q ss_pred eecccch-Hhhh-cccCccccccccCchhHHHH---hhcCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCC
Q 046605 353 IRGWAPQ-VLIL-DHEAVGGFVTHCGWNSILEG---VTAGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGD 427 (487)
Q Consensus 353 ~~~~vp~-~~ll-~~~~~~~~I~HGG~gs~~ea---l~~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~ 427 (487)
++...+. +.++ ..++. .++--||.||..|+ +.+++|++.+|.+. .....+ ...-......
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi-~~~~~~~i~~---------- 157 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFF-TSLDAGLVHV---------- 157 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHH-HHHCTTTEEE----------
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccC-ChhhcCeEEE----------
Confidence 4566664 3333 33443 45667899986654 67999999999832 111122 1211111111
Q ss_pred ccCHHHHHHHHHHHhc
Q 046605 428 FVKREAIVKAVNEIMM 443 (487)
Q Consensus 428 ~~~~~~l~~~i~~ll~ 443 (487)
.-+++++.+.+.+.+.
T Consensus 158 ~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 158 AADVAGAIAAVKQLLA 173 (176)
T ss_dssp ESSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3478888887776653
No 85
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=71.10 E-value=35 Score=30.18 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=28.6
Q ss_pred CceEEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 6 CQLHIFFFPF-LAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 6 ~~~~Il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
+|..|+|... ..-|=..-.+.|++.|.++|++|.++=
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3334444443 367999999999999999999999974
No 86
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=70.48 E-value=16 Score=34.26 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=34.8
Q ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHH--hCCCeEEEEeCCCC
Q 046605 6 CQLHIFFFP-FLAHGHMIPTVDMAKLFT--TRGVKASVITTPGN 46 (487)
Q Consensus 6 ~~~~Il~~~-~~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~~ 46 (487)
+.++|+|++ -|+-|-..-..+||..|+ ++|++|.++..+..
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 446777776 568899999999999999 89999999998843
No 87
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=69.31 E-value=47 Score=27.42 Aligned_cols=148 Identities=11% Similarity=0.114 Sum_probs=79.9
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
+|.|-|-+||.+ +....++..+.|++++..+-..+-+... .|+.+.+-.+. ...
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR----------tp~~l~~~~~~--------------a~~ 75 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR----------TPDYMFEYAET--------------ARE 75 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------SHHHHHHHHHH--------------TTT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc----------ChHHHHHHHHH--------------HHh
Confidence 567888899888 4677888888999998876555444332 56544321110 001
Q ss_pred cCccccccccC----chhHHHHhhcCCcEeccCcccc---chhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHH
Q 046605 366 EAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAE---QFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAV 438 (487)
Q Consensus 366 ~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i 438 (487)
..++.+|.=.| +.++..+ ..-+|+|.+|.... -.+.-.-++ ++=-|+-+-.--. ..++..++.-+..
T Consensus 76 ~g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTvai--g~~ga~NAallA~-- 149 (181)
T 4b4k_A 76 RGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAI--GKAGSTNAGLLAA-- 149 (181)
T ss_dssp TTCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECCS--SHHHHHHHHHHHH--
T ss_pred cCceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEec--CCccHHHHHHHHH--
Confidence 11222555544 2344444 45689999998543 222233333 4444444432100 0001122333333
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 439 NEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 439 ~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
+||. -.|++++++.+.+++.+++.+++
T Consensus 150 -qILa-~~d~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 150 -QILG-SFHDDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp -HHHT-TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHc-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 4443 12679999999999998866554
No 88
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=68.79 E-value=26 Score=29.98 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=59.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeCCC-CccchhhhhhhhhccCcceeEEEeeCCCccCCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRG--VKASVITTPG-NAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEG 81 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~-~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~ 81 (487)
|.++||+++..+.-+ .+.+|.+++.+.+ ++|..+.+.. ...-.+.. ...++.+..++. ..
T Consensus 5 m~~~ri~vl~SG~gs---nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A------~~~gIp~~~~~~--------~~ 67 (209)
T 4ds3_A 5 MKRNRVVIFISGGGS---NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKA------EAAGIATQVFKR--------KD 67 (209)
T ss_dssp -CCEEEEEEESSCCH---HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHH------HHTTCCEEECCG--------GG
T ss_pred CCCccEEEEEECCcH---HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHH------HHcCCCEEEeCc--------cc
Confidence 557889888776533 3566677776543 6877766532 21111111 012566665531 00
Q ss_pred CcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEec
Q 046605 82 WENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~ 148 (487)
. .. ... ...++.+.+++.+||+||+-.+ ......+-..+...++-+++
T Consensus 68 ~------~~---r~~----------~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 68 F------AS---KEA----------HEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp S------SS---HHH----------HHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred c------CC---HHH----------HHHHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 0 00 011 1236677788889999887764 33455555666666777654
No 89
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=68.77 E-value=5 Score=34.45 Aligned_cols=42 Identities=7% Similarity=-0.091 Sum_probs=33.0
Q ss_pred CCceEEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEeCCCCc
Q 046605 5 ICQLHIFFFPFLAHGHMIP-TVDMAKLFTTRGVKASVITTPGNA 47 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~ 47 (487)
.+.+||++.-.|+ +..+- ...+.+.|.++|++|.++.++...
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4567898888887 55665 889999999999999999998654
No 90
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=68.71 E-value=26 Score=32.34 Aligned_cols=45 Identities=27% Similarity=0.203 Sum_probs=36.4
Q ss_pred eEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 046605 8 LHIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 8 ~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 53 (487)
.+|+|++ -|+-|-..-..+||..|+++|++|.++..+. ...+...
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 59 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP-AHSLSDS 59 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS-SCCHHHH
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC-CcCHHHH
Confidence 5666665 6688999999999999999999999999887 4444443
No 91
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=68.53 E-value=6.9 Score=36.54 Aligned_cols=42 Identities=12% Similarity=0.017 Sum_probs=35.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHL 50 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 50 (487)
=+++...|+.|-..-++.+|..++..|..|.+++.+--.+.+
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 466777889999999999999999999999999987654443
No 92
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=68.23 E-value=46 Score=26.92 Aligned_cols=139 Identities=12% Similarity=0.132 Sum_probs=75.9
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhccc
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 366 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~ 366 (487)
+.|-|-+||.+ +....++....|+.++..+-..+-+-.. +|+.+.+-. ...+ ...
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR----------~p~~~~~~~-----------~~a~--~~~ 57 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK----------TAEHVVSML-----------KEYE--ALD 57 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT----------CHHHHHHHH-----------HHHH--TSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC----------CHHHHHHHH-----------HHhh--hcC
Confidence 35777778777 5677788888888888766555444321 565433211 1000 000
Q ss_pred CccccccccC----chhHHHHhhcCCcEeccCccc---cchhhHHHHHHHh--hceEeecccccccccCCccCHHHHHHH
Q 046605 367 AVGGFVTHCG----WNSILEGVTAGVPLVTWPVYA---EQFYNEKIVNEVL--KIGIGVGIQKWCRIVGDFVKREAIVKA 437 (487)
Q Consensus 367 ~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~---DQ~~~a~rv~~~~--G~G~~l~~~~~~~~~~~~~~~~~l~~~ 437 (487)
..+.+|.=.| +.++..++ .-.|+|.+|.-. +-.+ -.-++ +. |+.+.-- + +-.++.-+...
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~v-qmp~GvpVatv-~-------~~~nAa~lA~~ 126 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSL-RMPSGISPALV-L-------EPKNAALLAAR 126 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHH-CCCTTCCCEEC-C-------SHHHHHHHHHH
T ss_pred CCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHH-hCCCCCceEEe-c-------CchHHHHHHHH
Confidence 1223666655 33455444 558999999642 2222 12222 23 4443221 2 24555555544
Q ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 046605 438 VNEIMMGDRAEEMRSRAKAFGEMAKRAV 465 (487)
Q Consensus 438 i~~ll~~~~~~~~~~~a~~l~~~~~~a~ 465 (487)
|..+ + |+.++++.+.+++.+.+.+
T Consensus 127 Il~~-~---d~~l~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 127 IFSL-Y---DKEIADSVKSYMESNAQKI 150 (159)
T ss_dssp HHTT-T---CHHHHHHHHHHHHHHHHHH
T ss_pred HHhC-C---CHHHHHHHHHHHHHHHHHH
Confidence 4332 2 6799999999998888544
No 93
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=67.92 E-value=6.9 Score=33.05 Aligned_cols=44 Identities=9% Similarity=0.094 Sum_probs=36.2
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSR 52 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 52 (487)
+||++.-.|+.|-+ =...+.+.|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 58999999998855 578999999999999999999865555544
No 94
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=67.43 E-value=12 Score=34.51 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=26.1
Q ss_pred HHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
++.+.+++.+||++|+-.+ ......+-......++-++++
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 4556677889999887654 334444556566667777654
No 95
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=67.38 E-value=47 Score=28.54 Aligned_cols=105 Identities=15% Similarity=0.109 Sum_probs=59.5
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCC-CccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPG-NAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~-~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
+.+++||+++..++-+ .+.+|.+++.+. +++|..+.+.. ...-.+.. ...++.+..++. .
T Consensus 5 ~~~~~ri~vl~SG~gs---nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A------~~~gIp~~~~~~--------~ 67 (215)
T 3kcq_A 5 MKKELRVGVLISGRGS---NLEALAKAFSTEESSVVISCVISNNAEARGLLIA------QSYGIPTFVVKR--------K 67 (215)
T ss_dssp --CCEEEEEEESSCCH---HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHH------HHTTCCEEECCB--------T
T ss_pred CCCCCEEEEEEECCcH---HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHH------HHcCCCEEEeCc--------c
Confidence 4567899888776533 355666666554 37877776532 21111111 012566665531 0
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
.. . + .++.+.+++.+||+||+-.+ -.....+-..+...++-++++
T Consensus 68 ~~-------~----~-------------~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 68 PL-------D----I-------------EHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp TB-------C----H-------------HHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred cC-------C----h-------------HHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 00 0 1 36777788889999887765 345555666677677777553
No 96
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=67.23 E-value=34 Score=29.39 Aligned_cols=108 Identities=12% Similarity=0.149 Sum_probs=60.3
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCccc-hhhhhhhhhccCcceeEEEeeCCCccCCCCCCCc
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTT-RGVKASVITTPGNAPH-LSRSIQKASELGIELDVKIIKFPSAEAGLPEGWE 83 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~-v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 83 (487)
+++||+|+..+.-+- +.+|.++..+ .+++|..+.+..-... .+.. ...++.+..++. ...
T Consensus 4 ~~~riavl~SG~Gsn---l~all~~~~~~~~~eI~~Vis~~~~a~~~~~A------~~~gIp~~~~~~--------~~~- 65 (215)
T 3tqr_A 4 EPLPIVVLISGNGTN---LQAIIGAIQKGLAIEIRAVISNRADAYGLKRA------QQADIPTHIIPH--------EEF- 65 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHHHTTCSEEEEEEEESCTTCHHHHHH------HHTTCCEEECCG--------GGS-
T ss_pred CCcEEEEEEeCCcHH---HHHHHHHHHcCCCCEEEEEEeCCcchHHHHHH------HHcCCCEEEeCc--------ccc-
Confidence 568998887776443 4455555544 3688887665322111 1111 012566666531 000
Q ss_pred ccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 84 NLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
.. ...+ ..++.+.+++.+||+||+-.+ -.....+-..+...++-++++
T Consensus 66 -----~~---r~~~----------d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 66 -----PS---RTDF----------ESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -----SS---HHHH----------HHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----Cc---hhHh----------HHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 11 0111 236778888999999888665 335555666676677777653
No 97
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=66.82 E-value=30 Score=33.16 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=23.4
Q ss_pred HHHHHHhhCCCCEEEeCC--CCcchHHHHHHhCCCe
Q 046605 110 PLEQLLQEHKPDCLVADM--FFPWATDAAAKFGIPR 143 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~--~~~~~~~~A~~~giP~ 143 (487)
.+.++.++.++|.|+.-. ....+..+|+.+|+|.
T Consensus 66 ~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 66 VVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 455666678999998532 2234556789999994
No 98
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=66.26 E-value=5.5 Score=34.21 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=36.6
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCccchhhh
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTT-RGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~~ 53 (487)
.++.||++...|+.+=+. ...|.+.|.+ +|++|.++.++...+.+...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 456789998888877554 5899999999 89999999998766655543
No 99
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=65.55 E-value=3.8 Score=32.64 Aligned_cols=45 Identities=7% Similarity=0.116 Sum_probs=32.4
Q ss_pred ceEEEEE-cCC-CCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 046605 7 QLHIFFF-PFL-AHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLS 51 (487)
Q Consensus 7 ~~~Il~~-~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 51 (487)
.||++++ --| ....+--.+-++..|.++||+|+++.++.....++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 3456555 355 44555567889999999999999999986554444
No 100
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=65.37 E-value=20 Score=34.79 Aligned_cols=45 Identities=7% Similarity=-0.042 Sum_probs=37.1
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchh
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLS 51 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 51 (487)
.--+++...|+.|-..-++.+|...+.+|..|.+++.+.-.+.+.
T Consensus 197 G~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 197 RNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp SCEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 344677788999999999999999999999999999876654443
No 101
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=65.06 E-value=43 Score=27.23 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=75.3
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhccc
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 366 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~ 366 (487)
+.|-|-+||.+ +....++....|+.+|...=..+-+-.. .|+.+.+-.+ . ....
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR----------~p~~~~~~~~-----------~---a~~~ 57 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR----------TPKMMVQFAS-----------E---ARER 57 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------SHHHHHHHHH-----------H---TTTT
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC----------CHHHHHHHHH-----------H---HHhC
Confidence 45777778777 5677888888888888876555444321 5654432111 0 0011
Q ss_pred CccccccccC----chhHHHHhhcCCcEeccCccccch-hhH--HHHHHHhhceE--ee-cccccccccCCccCHHHHHH
Q 046605 367 AVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAEQF-YNE--KIVNEVLKIGI--GV-GIQKWCRIVGDFVKREAIVK 436 (487)
Q Consensus 367 ~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ~-~~a--~rv~~~~G~G~--~l-~~~~~~~~~~~~~~~~~l~~ 436 (487)
.++.+|.=.| +.++..++ .-.|+|.+|.-..-. ... .-++ +.--|+ .. ..+ +.+-.++.-+..
T Consensus 58 g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~v-qmp~GvPVatV~I~-----~a~~~nAa~lAa 130 (163)
T 3ors_A 58 GINIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIV-QMPGGIPVATTAIG-----AAGAKNAGILAA 130 (163)
T ss_dssp TCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTSCCEECCST-----HHHHHHHHHHHH
T ss_pred CCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHh-hCCCCCceEEEEcC-----CcccHHHHHHHH
Confidence 1222666555 34555554 568999999743211 111 1121 232332 21 111 001344444444
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 046605 437 AVNEIMMGDRAEEMRSRAKAFGEMAKRAV 465 (487)
Q Consensus 437 ~i~~ll~~~~~~~~~~~a~~l~~~~~~a~ 465 (487)
.|..+ + |+.++++.+.+++.+++.+
T Consensus 131 ~Il~~-~---d~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 131 RMLSI-Q---NPSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHT-T---CTHHHHHHHHHHHHHHHHH
T ss_pred HHHhC-C---CHHHHHHHHHHHHHHHHHH
Confidence 44332 2 5789999999999988654
No 102
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=65.01 E-value=4.8 Score=34.20 Aligned_cols=47 Identities=6% Similarity=-0.076 Sum_probs=37.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSR 52 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 52 (487)
.++.||++...|+.|=+. ...+.+.|.++|++|.++.++...+.+..
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 456789988888877775 68999999999999999999765555443
No 103
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=64.84 E-value=50 Score=30.04 Aligned_cols=104 Identities=8% Similarity=0.115 Sum_probs=60.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCC--CCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTP--GNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~--~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
.+++||+++..+. || .+.+|..+-.+- +.+|..+.+. ...+..++ .++.+..+|..
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~---------~gIp~~~~~~~-------- 162 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW---------HDIPYYHVPVD-------- 162 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT---------TTCCEEECCCC--------
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH---------cCCCEEEcCCC--------
Confidence 4578999888776 54 466666655433 4687776653 33333332 26777776421
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEec
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~ 148 (487)
...+ .. ...++.+.+++.+||+||.-.+ -.....+-..+.-.++-+++
T Consensus 163 ~~~r----------~~----------~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 163 PKDK----------EP----------AFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp SSCC----------HH----------HHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred cCCH----------HH----------HHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 0000 11 1236777888899999887654 33445556666666777654
No 104
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=64.63 E-value=13 Score=32.15 Aligned_cols=108 Identities=9% Similarity=0.058 Sum_probs=58.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCc
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTT-RGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWE 83 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 83 (487)
..++||+|+..++-+ .+.+|.+++.+ -+++|..+.+..-....+.. ...++.+..++. .
T Consensus 10 ~~~~ri~vl~SG~gs---nl~all~~~~~~~~~eI~~Vis~~~a~~~~~A------~~~gIp~~~~~~-------~---- 69 (215)
T 3da8_A 10 SAPARLVVLASGTGS---LLRSLLDAAVGDYPARVVAVGVDRECRAAEIA------AEASVPVFTVRL-------A---- 69 (215)
T ss_dssp CSSEEEEEEESSCCH---HHHHHHHHSSTTCSEEEEEEEESSCCHHHHHH------HHTTCCEEECCG-------G----
T ss_pred CCCcEEEEEEeCChH---HHHHHHHHHhccCCCeEEEEEeCCchHHHHHH------HHcCCCEEEeCc-------c----
Confidence 567899998877643 34455555533 24577766554322211111 012566655521 0
Q ss_pred ccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEec
Q 046605 84 NLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~ 148 (487)
+... ... ...++.+.+++.+||+||+-.+ ......+-..+...++-+++
T Consensus 70 ---~~~~---r~~----------~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 70 ---DHPS---RDA----------WDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp ---GSSS---HHH----------HHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred ---cccc---hhh----------hhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 0001 111 1346778888999999887554 34455555666666777754
No 105
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.79 E-value=7.8 Score=35.19 Aligned_cols=35 Identities=11% Similarity=0.305 Sum_probs=25.9
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
|||+|. |+.|-+- ..|++.|.++||+|+.++-.+.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCCC
Confidence 677765 5556554 4689999999999999986443
No 106
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=63.65 E-value=38 Score=32.77 Aligned_cols=43 Identities=19% Similarity=0.344 Sum_probs=36.6
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPH 49 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 49 (487)
...|+++..++.|-..-...||..|.++|++|.++..+.++..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a 142 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG 142 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh
Confidence 4456666678999999999999999999999999998877654
No 107
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=63.57 E-value=6.9 Score=33.27 Aligned_cols=43 Identities=9% Similarity=0.111 Sum_probs=35.5
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCCccchh
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITTPGNAPHLS 51 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v~ 51 (487)
|||++.-.|+.|-+. ...+.+.|.++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 478888888877765 89999999999 99999999976555554
No 108
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=63.34 E-value=5.6 Score=33.38 Aligned_cols=45 Identities=2% Similarity=0.022 Sum_probs=35.6
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 53 (487)
.||++.-.|+.|=+ =...+.+.|.++|++|.++.++.-.+.+...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 46888877776665 5789999999999999999998766655443
No 109
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=63.02 E-value=11 Score=35.84 Aligned_cols=37 Identities=16% Similarity=0.141 Sum_probs=31.4
Q ss_pred ceEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 7 QLHIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|++|++++ -++-|-..-..+||..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 56787776 45778889999999999999999999988
No 110
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=62.94 E-value=5.1 Score=32.32 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=26.9
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4678888843 5544 78899999999999999874
No 111
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=62.85 E-value=27 Score=32.06 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=25.0
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+|||+|+-.+..+ +...++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 4799999888655 34568888899998777664
No 112
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=62.30 E-value=63 Score=26.38 Aligned_cols=144 Identities=10% Similarity=0.093 Sum_probs=77.3
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
+|.|-|-+||.+ +....++....|+.+|..+-..+-+-.. .|+.+.+-. -.. ..
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR----------~p~~~~~~~-----------~~a---~~ 59 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR----------TPKETVEFV-----------ENA---DN 59 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------SHHHHHHHH-----------HHH---HH
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC----------CHHHHHHHH-----------HHH---Hh
Confidence 456778888877 5677888888888888876655554322 564433211 000 00
Q ss_pred cCccccccccCc----hhHHHHhhcCCcEeccCccc-cchhhH--HHHHHH--hhceEe-ecccccccccCCccCHHHHH
Q 046605 366 EAVGGFVTHCGW----NSILEGVTAGVPLVTWPVYA-EQFYNE--KIVNEV--LKIGIG-VGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 366 ~~~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~-DQ~~~a--~rv~~~--~G~G~~-l~~~~~~~~~~~~~~~~~l~ 435 (487)
..++.+|.=.|. .++..++. -.|+|.+|.-. +-.... .-++ + .|+.+. +..+ +.+-.++.-+.
T Consensus 60 ~g~~ViIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~v-qmp~GvPVatV~I~-----~a~~~nAa~lA 132 (169)
T 3trh_A 60 RGCAVFIAAAGLAAHLAGTIAAHT-LKPVIGVPMAGGSLGGLDALLSTV-QMPGGVPVACTAIG-----KAGAKNAAILA 132 (169)
T ss_dssp TTEEEEEEEECSSCCHHHHHHHTC-SSCEEEEECCCSTTTTHHHHHHHH-CCCTTSCCEECCST-----HHHHHHHHHHH
T ss_pred CCCcEEEEECChhhhhHHHHHhcC-CCCEEEeecCCCCCCCHHHHHHhh-cCCCCCceEEEecC-----CccchHHHHHH
Confidence 112226666553 34444433 58999999753 221222 2222 3 344322 2221 00133444444
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHh
Q 046605 436 KAVNEIMMGDRAEEMRSRAKAFGEMAKRAVE 466 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~ 466 (487)
..|..+ + |+.++++.+.+++.+++.+.
T Consensus 133 a~Il~~-~---d~~l~~kl~~~r~~~~~~v~ 159 (169)
T 3trh_A 133 AQIIAL-Q---DKSIAQKLVQQRTAKRETLK 159 (169)
T ss_dssp HHHHHT-T---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcC-C---CHHHHHHHHHHHHHHHHHHH
Confidence 444332 3 67999999999999886543
No 113
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=61.54 E-value=7.9 Score=30.06 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=27.5
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh---CCCeEEEe
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF---GIPRLVFH 147 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~---giP~v~~~ 147 (487)
+-.+.+++.+||+||.|...+ -|..+++.+ ++|+|.++
T Consensus 44 eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 44 EALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 344566778999999999766 466666654 78877664
No 114
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=61.38 E-value=13 Score=32.38 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=35.5
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+++|++..-|+-|-..-++++|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 578888889999999999999999999999998887765
No 115
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=61.15 E-value=25 Score=30.00 Aligned_cols=48 Identities=15% Similarity=0.016 Sum_probs=34.9
Q ss_pred hhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEE
Q 046605 274 QECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWV 321 (487)
Q Consensus 274 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 321 (487)
+-+.+|+.....+.++||..+|......+.+..+.++|+++|+.+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 345667644445669999988765445567888999999999986654
No 116
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=60.18 E-value=23 Score=34.35 Aligned_cols=42 Identities=14% Similarity=0.025 Sum_probs=33.9
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCcc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTT-RGVKASVITTPGNAP 48 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~ 48 (487)
.-=+++...|+.|-..-++.+|...+. .|..|.+++.+.-.+
T Consensus 200 G~l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 200 GSLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp TCEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 334677778899999999999999887 489999999875543
No 117
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=60.07 E-value=8.6 Score=31.50 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=35.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.++.+|++.+.+...|-....-++..|..+|++|......
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3578999999999999999999999999999999988653
No 118
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=60.02 E-value=13 Score=29.18 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=30.0
Q ss_pred ceEEEEEc-CC--CCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 046605 7 QLHIFFFP-FL--AHGHMIPTVDMAKLFTTRGVKASVITTPGNAP 48 (487)
Q Consensus 7 ~~~Il~~~-~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 48 (487)
+.|++|+. .+ ........+.+|...++.||+|+++....-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 34565553 44 45566788899999999999999888764443
No 119
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=59.79 E-value=71 Score=26.16 Aligned_cols=147 Identities=13% Similarity=0.150 Sum_probs=78.6
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILD 364 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~ 364 (487)
+.|.|-|-+||.+ +....++....|+.+|..+=..+-+-.. .|+.+.+-.+ . ..
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR----------~p~~l~~~~~-----------~---a~ 64 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR----------MPDEMFDYAE-----------K---AR 64 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------SHHHHHHHHH-----------H---HT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc----------CHHHHHHHHH-----------H---HH
Confidence 4567888889887 5677888888889888776554444332 5654332110 0 00
Q ss_pred ccCccccccccC----chhHHHHhhcCCcEeccCcccc---chhhHHHHHHHh--hceEeecccccccccCCccCHHHHH
Q 046605 365 HEAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAE---QFYNEKIVNEVL--KIGIGVGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 365 ~~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~D---Q~~~a~rv~~~~--G~G~~l~~~~~~~~~~~~~~~~~l~ 435 (487)
...++.+|.=.| +.++..+ ..-+|+|.+|.-.. -.+--.-++ ++ |+.+..--- .+++..++.-+.
T Consensus 65 ~~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv~i----~~~~a~NAallA 138 (173)
T 4grd_A 65 ERGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATFAI----GEAGAANAALFA 138 (173)
T ss_dssp TTTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCS----SHHHHHHHHHHH
T ss_pred hcCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEEec----CCcchHHHHHHH
Confidence 011222555444 3355544 44799999996432 222111222 33 444332111 000133344444
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 436 KAVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
.. ||. -.|++++++.+.+++++++.+.+
T Consensus 139 ~~---ILa-~~d~~l~~kl~~~r~~~~~~v~~ 166 (173)
T 4grd_A 139 VS---ILS-GNSVDYANRLAAFRVRQNEAAHA 166 (173)
T ss_dssp HH---HHT-TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HH---HHc-CCCHHHHHHHHHHHHHHHHHHHc
Confidence 33 443 11689999999999999866543
No 120
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=58.98 E-value=14 Score=33.43 Aligned_cols=38 Identities=5% Similarity=0.060 Sum_probs=25.3
Q ss_pred CCceEEEEE-cCCCCCChHHH--HHHHHHHHhCCCeEEEEe
Q 046605 5 ICQLHIFFF-PFLAHGHMIPT--VDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 5 ~~~~~Il~~-~~~~~GH~~p~--l~La~~L~~rGh~Vt~~~ 42 (487)
|+.||||++ ..|-..-++-. -...+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 677888877 45654444432 346788889999999873
No 121
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=58.86 E-value=12 Score=33.18 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=33.4
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhh
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSR 52 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 52 (487)
+++||||+..--+. |---+..|+++|.+ +|+|+++.+...+.-+..
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc
Confidence 66799999985554 44457888999977 899999999876654433
No 122
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=58.42 E-value=19 Score=32.91 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=24.9
Q ss_pred HHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
++.+.+++.+||++|+-.+ ......+-......++-++++
T Consensus 66 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 3556677789999887654 334444444555567777654
No 123
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=58.37 E-value=36 Score=33.05 Aligned_cols=38 Identities=13% Similarity=0.186 Sum_probs=25.6
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+.. .+.||+++.. |. -.+.+++++.+.|++|+.+.+.
T Consensus 1 m~~~-~~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~ 38 (461)
T 2dzd_A 1 METR-RIRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSK 38 (461)
T ss_dssp --CC-CCSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECG
T ss_pred CCCC-cCcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECC
Confidence 5543 2457888743 32 3567899999999999888764
No 124
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=58.37 E-value=11 Score=33.89 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=26.3
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++++|+|+ |+ |- --..|++.|.++||+|+.++-.
T Consensus 2 ~~~~ilVt--Ga-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIA--GC-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEE--CC-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEE--CC-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 46788887 34 73 3457899999999999999764
No 125
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=58.36 E-value=15 Score=32.43 Aligned_cols=39 Identities=10% Similarity=0.184 Sum_probs=28.1
Q ss_pred CceEEEEEcCCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGH-----------MIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH-----------~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.|+||+|+.....+. ..=+..-...|.++|++|+++++.
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 367898887653221 134667788899999999999975
No 126
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=58.33 E-value=20 Score=27.01 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=28.3
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
+..+.+++.+||+||.|...+ -+..+.+.+ ++|++.++..
T Consensus 37 ~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 37 IALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 344556678999999998665 466666554 5788888764
No 127
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=57.13 E-value=1.1e+02 Score=27.54 Aligned_cols=105 Identities=9% Similarity=0.135 Sum_probs=61.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCC---CccchhhhhhhhhccCcceeEEEeeCCCccCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPG---NAPHLSRSIQKASELGIELDVKIIKFPSAEAGLP 79 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~---~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~ 79 (487)
.+++||+++..+. || .+.+|..+-.+- ..+|..+.+.. ..+..++. ++.+..+|..
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~---------gIp~~~~~~~------- 147 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFG---------DIPFYHFPVN------- 147 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTT---------TCCEEECCCC-------
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHc---------CCCEEEeCCC-------
Confidence 4578998887765 44 455555554432 24666665532 33333333 6777777521
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 80 EGWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
. . . ... ...++.+.+++.++|+||.-.+ -.....+-..+.-.++-++++
T Consensus 148 ~--~------~---r~~----------~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 148 K--D------T---RRQ----------QEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp T--T------T---HHH----------HHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred c--c------c---HHH----------HHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0 0 0 011 1235677778889999887654 345566667777777777653
No 128
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=56.91 E-value=57 Score=29.92 Aligned_cols=35 Identities=9% Similarity=0.025 Sum_probs=21.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRG--VKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~ 43 (487)
+++++|+|+ |+.|.+- ..|+++|.++| ++|+....
T Consensus 22 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVT--GGAGFIG--SNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEE--TTTSHHH--HHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEE--CCccHHH--HHHHHHHHhhCCCcEEEEEec
Confidence 456777765 4445443 47899999999 55555543
No 129
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=56.69 E-value=16 Score=28.71 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=28.8
Q ss_pred HHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEechh
Q 046605 112 EQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGTS 150 (487)
Q Consensus 112 ~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 150 (487)
.+.+++.+||+||.|...+ -|..+++.. .+|+|.++...
T Consensus 50 l~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 50 LPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 3445566999999999777 577777765 48988887654
No 130
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=56.68 E-value=82 Score=25.87 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=77.7
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
++.|-|-+||.+ +....++....|+.+|..+=..+-+-.. .|+.+.+- +-... -..
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR----------~p~~~~~~-----------~~~a~-~~g 62 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR----------TPEAMFSY-----------ARGAA-ARG 62 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------CHHHHHHH-----------HHHHH-HHT
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC----------CHHHHHHH-----------HHHHH-hCC
Confidence 345777778777 5677788888888888876555444321 55443321 10000 011
Q ss_pred cCccccccccC----chhHHHHhhcCCcEeccCccccch-hhH--HHHHHHh--hceEe-ecccccccccCCccCHHHHH
Q 046605 366 EAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAEQF-YNE--KIVNEVL--KIGIG-VGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 366 ~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ~-~~a--~rv~~~~--G~G~~-l~~~~~~~~~~~~~~~~~l~ 435 (487)
.++ +|.=.| +.++..++ .-.|+|.+|.-.-.. ... .-++ ++ |+++. +..+ +-.++..+.
T Consensus 63 ~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~v-qmp~GvpVatV~I~-------~~~nAa~lA 131 (174)
T 3lp6_A 63 LEV--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIV-QMPAGVPVATVSIG-------GAGNAGLLA 131 (174)
T ss_dssp CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHH-CCCTTCCCEECCTT-------CHHHHHHHH
T ss_pred CCE--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHh-hCCCCCeeEEEEcC-------cchHHHHHH
Confidence 233 666555 34555554 568999999752211 111 1121 22 33222 2222 245666655
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHh
Q 046605 436 KAVNEIMMGDRAEEMRSRAKAFGEMAKRAVE 466 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~ 466 (487)
..|..+ . |+.++++.+.+++++++.+.
T Consensus 132 a~Il~~-~---d~~l~~kl~~~r~~~~~~v~ 158 (174)
T 3lp6_A 132 VRMLGA-A---NPQLRARIVAFQDRLADVVA 158 (174)
T ss_dssp HHHHHT-T---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhC-C---CHHHHHHHHHHHHHHHHHHH
Confidence 555433 2 67999999999999886554
No 131
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=56.65 E-value=23 Score=30.55 Aligned_cols=111 Identities=9% Similarity=0.129 Sum_probs=62.0
Q ss_pred ceEEEEEcCCCCCChHH----HHHHHHHHHhC-CCeEEEEeCC-CCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 7 QLHIFFFPFLAHGHMIP----TVDMAKLFTTR-GVKASVITTP-GNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~~-~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
|..|+++.--..|.+.| ++.-|+.|+++ |-+|+.++-. ...+.++.... .|.. +.+.+..+
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~----~Gad-~v~~v~~~-------- 69 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP----YGVD-KLHVFDAE-------- 69 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG----GTCS-EEEEEECG--------
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh----cCCC-EEEEecCc--------
Confidence 45688888766677655 56778888765 7777665532 22333333311 1211 12223211
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCc---chHHHHHHhCCCeEEEe
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFP---WATDAAAKFGIPRLVFH 147 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~---~~~~~A~~~giP~v~~~ 147 (487)
.... ... . .....+.++++..+||+|++-.... .+..+|..+++|.+.-.
T Consensus 70 ~~~~---~~~----~----------~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 70 GLYP---YTS----L----------PHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp GGSS---CCH----H----------HHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred cccc---CCH----H----------HHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 0111 000 1 1123555666667999999887544 35678999999988643
No 132
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=55.72 E-value=14 Score=29.16 Aligned_cols=44 Identities=7% Similarity=0.118 Sum_probs=27.0
Q ss_pred CCCCCCceEEEEE-cCCCCCChH--HHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 1 MASGICQLHIFFF-PFLAHGHMI--PTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 1 m~~~~~~~~Il~~-~~~~~GH~~--p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
|+++|| |++|+ ..+-+|+.. -.+.+|.++.+.||+|.++-..+-
T Consensus 1 ~~~~Mk--k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DG 47 (136)
T 2hy5_B 1 MSEVVK--KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDG 47 (136)
T ss_dssp ----CC--EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGG
T ss_pred Cccchh--EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHH
Confidence 554433 45444 444556544 457779999999999998877543
No 133
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=55.67 E-value=14 Score=31.61 Aligned_cols=40 Identities=13% Similarity=-0.025 Sum_probs=36.0
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
++.+|++.+.++..|-....-++..|..+|++|..+...-
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~v 126 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDI 126 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSB
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4568999999999999999999999999999999887643
No 134
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=54.96 E-value=32 Score=33.28 Aligned_cols=36 Identities=11% Similarity=0.014 Sum_probs=26.6
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.|.+.||+++..+. ..+.+++++.+.|++|+.+.+.
T Consensus 3 ~m~~~kiLI~g~g~-----~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 3 AMEIKSILIANRGE-----IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp TTCCCEEEECCCHH-----HHHHHHHHHHHTTCEEEEEEEG
T ss_pred ccccceEEEECCCH-----HHHHHHHHHHHcCCEEEEEEcC
Confidence 34567888864332 4578999999999998888654
No 135
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=54.60 E-value=88 Score=25.65 Aligned_cols=144 Identities=17% Similarity=0.150 Sum_probs=77.2
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhccc
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 366 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~ 366 (487)
+.|-|-+||.+ +....++....|+.+|..+=..+.+-.. .|+.+.+-.+ . ....
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaHR----------~p~~~~~~~~-----------~---a~~~ 66 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAHR----------TPDRLFSFAE-----------Q---AEAN 66 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------CHHHHHHHHH-----------H---TTTT
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC----------CHHHHHHHHH-----------H---HHhC
Confidence 35677778777 5677888888888888876555554322 5654432111 0 0011
Q ss_pred CccccccccC----chhHHHHhhcCCcEeccCccc-cchhhH--HHHHHHh--hceEee-cccccccccCCccCHHHHHH
Q 046605 367 AVGGFVTHCG----WNSILEGVTAGVPLVTWPVYA-EQFYNE--KIVNEVL--KIGIGV-GIQKWCRIVGDFVKREAIVK 436 (487)
Q Consensus 367 ~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~-DQ~~~a--~rv~~~~--G~G~~l-~~~~~~~~~~~~~~~~~l~~ 436 (487)
.++.+|.=.| +.++..++. -+|+|.+|.-. +-.... .-++ ++ |+.+.. ..+ +.+-.++.-+..
T Consensus 67 g~~ViIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~v-qmP~GvPVatV~I~-----~a~~~nAa~lAa 139 (174)
T 3kuu_A 67 GLHVIIAGNGGAAHLPGMLAAKT-LVPVLGVPVQSAALSGVDSLYSIV-QMPRGIPVGTLAIG-----KAGAANAALLAA 139 (174)
T ss_dssp TCSEEEEEEESSCCHHHHHHHTC-SSCEEEEEECCTTTTTHHHHHHHH-TCCTTSCCEECCSS-----HHHHHHHHHHHH
T ss_pred CCcEEEEECChhhhhHHHHHhcc-CCCEEEeeCCCCCCCCHHHHHHhh-hCCCCCeeEEEEeC-----CccchHHHHHHH
Confidence 1222666555 334444433 58999999743 211222 2222 22 432221 111 001234445544
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 437 AVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 437 ~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
.|..+ . |+.++++.+.+++.+++.+.+
T Consensus 140 ~ILa~-~---d~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 140 QILAL-H---DTELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHT-T---CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcC-C---CHHHHHHHHHHHHHHHHHHHh
Confidence 44332 3 689999999999999876654
No 136
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=54.41 E-value=1e+02 Score=26.30 Aligned_cols=107 Identities=11% Similarity=0.093 Sum_probs=58.4
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCcc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWEN 84 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~~ 84 (487)
|+||+++..+. | ..+.+|.++..+. ..+|..+.+..-...+...- ...++.+..++. ....
T Consensus 2 m~riavl~Sg~-G--snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A-----~~~gIp~~~~~~--------~~~~- 64 (211)
T 3p9x_A 2 MKRVAIFASGS-G--TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERV-----KVHEIPVCALDP--------KTYP- 64 (211)
T ss_dssp -CEEEEECCTT-C--HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHH-----HTTTCCEEECCG--------GGSS-
T ss_pred CCEEEEEEeCC-c--hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHH-----HHcCCCEEEeCh--------hhcC-
Confidence 67898888775 4 3467777766443 25777766542211111110 112566655531 1110
Q ss_pred cccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEec
Q 046605 85 LDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~ 148 (487)
. ... ...++.+.+++.+||+||+-.+ -.....+-..+...++-+++
T Consensus 65 -----~---r~~----------~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHp 111 (211)
T 3p9x_A 65 -----S---KEA----------YEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHP 111 (211)
T ss_dssp -----S---HHH----------HHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred -----c---hhh----------hHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECC
Confidence 0 011 1336777888899999887765 33455555666666777754
No 137
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=54.06 E-value=14 Score=32.87 Aligned_cols=45 Identities=9% Similarity=0.080 Sum_probs=36.1
Q ss_pred CCceEEEEEcCC---CCCChHHHHHHHHHHHhCCCeEEEEeCCCCccc
Q 046605 5 ICQLHIFFFPFL---AHGHMIPTVDMAKLFTTRGVKASVITTPGNAPH 49 (487)
Q Consensus 5 ~~~~~Il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 49 (487)
+.+||.+|++.+ +.|-=.-...|+..|..||++||+.=-+++.+.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNv 67 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINI 67 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceec
Confidence 677899999866 556667888999999999999999977666543
No 138
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=53.95 E-value=73 Score=27.91 Aligned_cols=38 Identities=11% Similarity=0.007 Sum_probs=25.9
Q ss_pred ceEEEEEcCCCCCCh-HHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHM-IPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~-~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.|||+++..-+.-++ ..+...++.+..-|.+|.+++.+
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 368988866555444 46667777776667777777654
No 139
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.94 E-value=19 Score=32.06 Aligned_cols=40 Identities=10% Similarity=-0.010 Sum_probs=35.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.++.+|++.+.++..|-....-++..|..+|++|..+...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3467999999999999999999999999999999888654
No 140
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=53.93 E-value=14 Score=29.55 Aligned_cols=36 Identities=8% Similarity=-0.023 Sum_probs=28.6
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 11 FFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 11 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
+++..+..-..++.+.+|...++.|++|+++.+..-
T Consensus 12 II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~g 47 (144)
T 2qs7_A 12 IIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWG 47 (144)
T ss_dssp EEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHH
Confidence 344455667788999999999999999999988543
No 141
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=53.47 E-value=43 Score=32.91 Aligned_cols=109 Identities=19% Similarity=0.122 Sum_probs=64.1
Q ss_pred cE-eecccchHh---hhcccCcccccc---ccCch-hHHHHhhcCC-----cEeccCccccchhhHHHHHHHhhceEeec
Q 046605 351 LI-IRGWAPQVL---ILDHEAVGGFVT---HCGWN-SILEGVTAGV-----PLVTWPVYAEQFYNEKIVNEVLKIGIGVG 417 (487)
Q Consensus 351 v~-~~~~vp~~~---ll~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~~a~rv~~~~G~G~~l~ 417 (487)
+. +..++++.+ ++..+++ |+. .=|.| +..||+++|+ |+|+--..+ .+. ...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 457788654 6666887 543 33544 8999999998 555543222 221 122466665
Q ss_pred ccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhhc
Q 046605 418 IQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVENGGSSSSNLNSLIEDLSLR 485 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~ 485 (487)
. .+.+++.++|.++|+.+ ...-+++.++..+..+ + -+...-.+++++.|++.
T Consensus 403 p----------~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P----------YDRDEVAAALDRALTMS-LAERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T----------TCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred C----------CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 4 47899999999999721 2233344444444433 2 34556666777666543
No 142
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=52.89 E-value=14 Score=33.33 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=33.1
Q ss_pred CceEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccc
Q 046605 6 CQLHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPH 49 (487)
Q Consensus 6 ~~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 49 (487)
+|+|++.+. -|+-|-..-...||..|+++|++|.++=.+.....
T Consensus 2 ~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~q~~ 47 (286)
T 2xj4_A 2 AETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRT 47 (286)
T ss_dssp --CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCTTTCH
T ss_pred CCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 466665554 45889999999999999999999999876653333
No 143
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=52.83 E-value=10 Score=30.48 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=26.6
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
-...++|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 16 ~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 356688998854 4433 55789999999999998764
No 144
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=52.28 E-value=25 Score=31.08 Aligned_cols=38 Identities=16% Similarity=0.158 Sum_probs=28.5
Q ss_pred ceEEEEEcCCCC----------CC-hHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAH----------GH-MIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~----------GH-~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+||+|+-.... |- ..=++.-...|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 678988866532 11 344777788999999999999974
No 145
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=50.70 E-value=77 Score=32.59 Aligned_cols=36 Identities=22% Similarity=0.071 Sum_probs=24.9
Q ss_pred HhhhcccCcccccc-c-cCchhHHHHhhcCCcEeccCc
Q 046605 360 VLILDHEAVGGFVT-H-CGWNSILEGVTAGVPLVTWPV 395 (487)
Q Consensus 360 ~~ll~~~~~~~~I~-H-GG~gs~~eal~~GvP~l~~P~ 395 (487)
.+++..+++-++=+ + |-..+.+||+++|+|+|+--.
T Consensus 513 ~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 513 DEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp HHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred HHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 45787888733222 2 234489999999999998654
No 146
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=50.35 E-value=18 Score=30.31 Aligned_cols=40 Identities=23% Similarity=0.330 Sum_probs=28.0
Q ss_pred CCceEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTV-DMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~ 44 (487)
|.|+||+++-....|+..-+. .+++.|.++|++|.++.-.
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 457789888766678766544 4677777789999887653
No 147
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=49.78 E-value=17 Score=27.44 Aligned_cols=39 Identities=5% Similarity=0.060 Sum_probs=27.2
Q ss_pred eEEEEEc-CC--CCCChHHHHHHHHHHHhC-CC-eEEEEeCCCC
Q 046605 8 LHIFFFP-FL--AHGHMIPTVDMAKLFTTR-GV-KASVITTPGN 46 (487)
Q Consensus 8 ~~Il~~~-~~--~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~ 46 (487)
+|++++- .+ +.......+.+|..+.+. || +|+++...+.
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 3454443 33 334566789999999999 99 9998887543
No 148
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=49.77 E-value=32 Score=26.40 Aligned_cols=40 Identities=20% Similarity=0.393 Sum_probs=27.3
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEechh
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGTS 150 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 150 (487)
..+.+++.+||+||.|...+ -+..+.+.+ .+|+|.++...
T Consensus 40 al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 40 ALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 34455667999999998665 355555443 57888887653
No 149
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=49.69 E-value=9.3 Score=34.94 Aligned_cols=38 Identities=13% Similarity=0.081 Sum_probs=26.1
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+...+++||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 5555567899999766555 4689999999999998854
No 150
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=49.53 E-value=78 Score=31.34 Aligned_cols=34 Identities=12% Similarity=0.333 Sum_probs=27.0
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHh-------CCCeEEE
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKF-------GIPRLVF 146 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~-------giP~v~~ 146 (487)
++.+++++.+||++|.++ .+..+|+.+ |+|++.+
T Consensus 425 ~l~~~i~~~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhcCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 456666667999999996 357788888 9999877
No 151
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=49.45 E-value=9.9 Score=34.22 Aligned_cols=26 Identities=8% Similarity=0.109 Sum_probs=22.8
Q ss_pred ccccccCchhHHHHhhc------CCcEeccCc
Q 046605 370 GFVTHCGWNSILEGVTA------GVPLVTWPV 395 (487)
Q Consensus 370 ~~I~HGG~gs~~eal~~------GvP~l~~P~ 395 (487)
++|.=||=||+.+++.. ++|++++|.
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 49999999999999765 899999985
No 152
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=49.29 E-value=60 Score=25.36 Aligned_cols=63 Identities=5% Similarity=-0.048 Sum_probs=39.8
Q ss_pred cCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 046605 386 AGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAK 462 (487)
Q Consensus 386 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 462 (487)
..+|+|++--..| ....... -..|+--.+.+ .++.++|..+|++++. ...++...+++++.+.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~-~~~g~~~~l~k---------P~~~~~L~~~i~~~~~---~~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQA-IQDGAYDFIAK---------PFAADRLVQSARRAEE---KRRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHH-HHTTCCEEEES---------SCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHH-HhcCCCeEEeC---------CCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 4788888765444 3334444 26676666654 5899999999999997 4445444444444433
No 153
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=49.26 E-value=1.3e+02 Score=25.92 Aligned_cols=151 Identities=11% Similarity=0.033 Sum_probs=79.4
Q ss_pred hhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccc
Q 046605 279 WLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAP 358 (487)
Q Consensus 279 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp 358 (487)
|++-. .+++++|..|.++ ...++.|.+.|.++.+..+... +.+.......++.+....-
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~-------------~~l~~l~~~~~i~~i~~~~ 84 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS-------------AEINEWEAKGQLRVKRKKV 84 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC-------------HHHHHHHHTTSCEEECSCC
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC-------------HHHHHHHHcCCcEEEECCC
Confidence 44443 4668889877544 4455667778888887754321 2222222233454443322
Q ss_pred hHhhhcccCccccccccCchhHHHHhhc----CCcEeccCccccchhhH-----HHHHHHhhceEeecccccccccCCcc
Q 046605 359 QVLILDHEAVGGFVTHCGWNSILEGVTA----GVPLVTWPVYAEQFYNE-----KIVNEVLKIGIGVGIQKWCRIVGDFV 429 (487)
Q Consensus 359 ~~~ll~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~~~DQ~~~a-----~rv~~~~G~G~~l~~~~~~~~~~~~~ 429 (487)
+.+.|..+++ +|.--|.-.+.+.++. |+|+-+ .|.+..+ ..+ ++-++-+.+.... ..-.
T Consensus 85 ~~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaIST~G-----~sP~ 152 (223)
T 3dfz_A 85 GEEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAISTDG-----ASPL 152 (223)
T ss_dssp CGGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECTT-----SCHH
T ss_pred CHhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEEECCC-----CCcH
Confidence 3445666665 7777776666555543 555422 3433322 222 2333444443320 0123
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 046605 430 KREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKR 463 (487)
Q Consensus 430 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 463 (487)
-+..|++.|.+++. +....+-+.+.++++++++
T Consensus 153 la~~iR~~ie~~lp-~~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 153 LTKRIKEDLSSNYD-ESYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHSC-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHH
Confidence 45778888888875 2235677777777777763
No 154
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=48.89 E-value=35 Score=25.49 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=29.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+++||++++..+.|--.-.-.+-+.+.++|.++.+...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 357899999977666556666888899999998766544
No 155
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=48.32 E-value=25 Score=27.35 Aligned_cols=40 Identities=18% Similarity=0.329 Sum_probs=27.2
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh---------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF---------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~---------giP~v~~~~~ 149 (487)
+..+.++..+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 49 ~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 49 QVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 344455667999999998655 456665544 2788887654
No 156
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.06 E-value=9.9 Score=29.92 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=25.8
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+++||+++-. |.+ -..+++.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 4568888865 443 467899999999999998764
No 157
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=47.02 E-value=31 Score=25.69 Aligned_cols=41 Identities=15% Similarity=0.485 Sum_probs=27.8
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHH----hCCCeEEEechh
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAK----FGIPRLVFHGTS 150 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~----~giP~v~~~~~~ 150 (487)
+..+.+++.+||+||.|...+ -+..+.+. .++|.+.++...
T Consensus 37 ~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 37 EAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 445556678999999998655 34444443 368888887643
No 158
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=46.44 E-value=16 Score=33.87 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=29.5
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.++||.|+-.+..| |-.+|+.|+++||+|+..=..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 56789999999877 557999999999999987543
No 159
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=46.27 E-value=41 Score=23.75 Aligned_cols=54 Identities=6% Similarity=0.123 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHhcCchHHH----HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhhccC
Q 046605 430 KREAIVKAVNEIMMGDRAEE----MRSRAKAFGEMAKRAVENGGSSSSNLNSLIEDLSLRRH 487 (487)
Q Consensus 430 ~~~~l~~~i~~ll~~~~~~~----~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~l~~~~~ 487 (487)
--++|..++.++-.+.+||+ |.....++.-... ...+..+++.|+...+.+|+|
T Consensus 26 ~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eysl~rN----aqSttiKa~KDi~~sI~~~~~ 83 (85)
T 2ca5_A 26 LQGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRN----AQSNTVKVIKDVDAAILEHHH 83 (85)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcc
Confidence 34677777777665454664 4444444443333 334566788999999988876
No 160
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=46.21 E-value=11 Score=35.23 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=25.4
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|++|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456899999766555 3578889999999998864
No 161
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=45.72 E-value=13 Score=32.44 Aligned_cols=38 Identities=8% Similarity=0.009 Sum_probs=32.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|||+|..-|+-|=..-...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57888666777888999999999999999999986654
No 162
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=45.53 E-value=19 Score=30.26 Aligned_cols=38 Identities=13% Similarity=0.301 Sum_probs=27.9
Q ss_pred CceEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTV-DMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~ 44 (487)
+||||+++... .|+..-+. .+++.|.+.|++|.++.-.
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 46789988777 88776544 4566677789999888654
No 163
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=45.50 E-value=20 Score=32.79 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=27.2
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|||+|+-.|+.|- .+|..|.++||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 6899998888874 46889999999999998765
No 164
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=45.34 E-value=32 Score=31.52 Aligned_cols=42 Identities=7% Similarity=-0.019 Sum_probs=34.7
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPH 49 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 49 (487)
-=+++...|+.|-..-++.+|...+.+|..|.+++.+.-.+.
T Consensus 69 ~l~li~G~pG~GKTtl~l~ia~~~a~~g~~vl~~slE~s~~~ 110 (315)
T 3bh0_A 69 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKE 110 (315)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHTTTCEEEEEESSSCHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEECCCCHHH
Confidence 346777788999999999999999999999999998755433
No 165
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=44.94 E-value=16 Score=31.81 Aligned_cols=43 Identities=12% Similarity=0.014 Sum_probs=32.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHH-HhCCCeEEEEeCCCCccch
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLF-TTRGVKASVITTPGNAPHL 50 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L-~~rGh~Vt~~~~~~~~~~v 50 (487)
-=+++...|+.|-..-++.+|... .+.|..|.+++.+...+.+
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDL 74 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHH
Confidence 346677788999999999988664 4558889999887655443
No 166
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=44.89 E-value=36 Score=29.76 Aligned_cols=39 Identities=8% Similarity=0.210 Sum_probs=28.3
Q ss_pred ceEEEEEcCCCCC-----------ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHG-----------HMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|+||+|+.....+ ...=+......|.++|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5688888764221 33556777888889999999999853
No 167
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=44.72 E-value=17 Score=31.06 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=25.3
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|++|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 5777776 4444433 57899999999999998764
No 168
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=44.72 E-value=72 Score=28.69 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=32.5
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEec
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~~ 148 (487)
..+.+.+++.+..+|+++..+. .+-.+|+..|++++.+.+
T Consensus 218 ~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 218 KEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 3677888889999999998766 566789999999887643
No 169
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=44.60 E-value=25 Score=30.22 Aligned_cols=41 Identities=10% Similarity=-0.083 Sum_probs=35.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.++.||++.+.++-.|-....-++..|..+|++|......-
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~v 130 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDV 130 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSC
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCC
Confidence 35689999999999999999999999999999999987643
No 170
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=44.23 E-value=1.4e+02 Score=24.78 Aligned_cols=143 Identities=15% Similarity=0.209 Sum_probs=80.7
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
-|.|-|-+||.+ +....++....|+.+|..+=..+.+-.. .|+.+.+-.+ + ...
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR----------~p~~l~~~~~-----------~---a~~ 66 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR----------TPDRMFEYAK-----------N---AEE 66 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT----------CHHHHHHHHH-----------H---TTT
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC----------CHHHHHHHHH-----------H---HHh
Confidence 357888888887 5677888888888888876555544332 5654432111 0 000
Q ss_pred cCccccccccC----chhHHHHhhcCCcEeccCcccc-chhhHH--HHHHHh--hceEe-ecccccccccCCccCHHHHH
Q 046605 366 EAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAE-QFYNEK--IVNEVL--KIGIG-VGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 366 ~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~D-Q~~~a~--rv~~~~--G~G~~-l~~~~~~~~~~~~~~~~~l~ 435 (487)
..++.+|.=.| +.++..++ .-.|+|.+|.-.. -..... -++ ++ |+.+. +..+ +-.++.-+.
T Consensus 67 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id-------~~~nAa~lA 137 (183)
T 1o4v_A 67 RGIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN-------NAKNAGILA 137 (183)
T ss_dssp TTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT-------CHHHHHHHH
T ss_pred CCCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC-------CchHHHHHH
Confidence 11222555544 34555555 6689999997542 111111 222 45 54332 2222 255666666
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 436 KAVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
..|.. +. |+.++++.+.+++.+.+.+.+
T Consensus 138 aqIla-~~---d~~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 138 ASILG-IK---YPEIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHH-TT---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-cC---CHHHHHHHHHHHHHHHHHHHH
Confidence 55543 33 678999999999888865544
No 171
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=44.18 E-value=46 Score=32.76 Aligned_cols=41 Identities=12% Similarity=-0.065 Sum_probs=34.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCCccc
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITTPGNAPH 49 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~ 49 (487)
=+++...|+.|=..-.+.+|..++.+ |..|.+++.+...+.
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~ 285 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEE 285 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHH
Confidence 35666788999999999999999987 999999998765443
No 172
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=44.15 E-value=12 Score=34.05 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=25.2
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+||||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 36799999766555 4678999999999999865
No 173
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=43.56 E-value=1.8e+02 Score=26.12 Aligned_cols=105 Identities=9% Similarity=0.134 Sum_probs=61.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCC--CCccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTP--GNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~--~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
.+++||+++..+. || .+.+|..+-.+- ..+|..+.+. ......++. ++.+..+|.. .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~-------~ 153 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH---------GLPFRHFPIT-------A 153 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCC-------S
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCC-------c
Confidence 4567998887665 54 556666655443 3677766653 223333332 6778777521 0
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
.+ ... ...++.+.+++.++|+||.-.+ -.....+-..+.-.++-++++
T Consensus 154 --~~---------r~~----------~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 154 --DT---------KAQ----------QEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp --SC---------HHH----------HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --CC---------HHH----------HHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 00 011 1235677778889999887654 345666667777777777653
No 174
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=42.82 E-value=12 Score=34.31 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=27.7
Q ss_pred CCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 3 SGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 3 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
.+.+++||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 5 ~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred cccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 34567899999766555 4789999999999988743
No 175
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=42.51 E-value=18 Score=28.00 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=24.6
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+.|||+++-. |.+- ..+++.|.++||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3578888833 6554 35789999999999998753
No 176
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=42.12 E-value=40 Score=29.33 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=21.2
Q ss_pred CCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 18 HGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 18 ~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.|.+ -.+||++|.++|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 5543 4578999999999999999864
No 177
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=42.10 E-value=12 Score=35.33 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=27.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+|+||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 13 m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 13 LYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred hccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 445599999877666 46789999999999998653
No 178
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=41.64 E-value=26 Score=32.04 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=24.0
Q ss_pred hhcccCccccccccCchhHHHHhhc----CCcEeccCc
Q 046605 362 ILDHEAVGGFVTHCGWNSILEGVTA----GVPLVTWPV 395 (487)
Q Consensus 362 ll~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~ 395 (487)
....+++ +|.-||=||+++++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3344565 9999999999999864 899999874
No 179
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=41.52 E-value=48 Score=25.32 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=26.3
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... .+..+.+.+ .+|+|.++..
T Consensus 38 ~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 38 ECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 334455667899999998655 355555443 5788877653
No 180
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=41.49 E-value=11 Score=32.66 Aligned_cols=35 Identities=17% Similarity=0.107 Sum_probs=27.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+|+||.|+-.|..| ..+|+.|.++||+|+++...
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 567899999766555 46889999999999985543
No 181
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=41.14 E-value=38 Score=23.44 Aligned_cols=50 Identities=24% Similarity=0.198 Sum_probs=33.1
Q ss_pred hcCCcEeccCccccchhhHHHHHH--HhhceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 385 TAGVPLVTWPVYAEQFYNEKIVNE--VLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 385 ~~GvP~l~~P~~~DQ~~~a~rv~~--~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
-+|+|++++--.+.|.+.-..-.| .-|+...+-+ ..++|+|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlk---------stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK---------STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE---------CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc---------cCCHHHHHHHHHHHHH
Confidence 468999988877776543322213 3455554444 5899999999988774
No 182
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=40.98 E-value=14 Score=34.36 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=27.7
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++|||+|+-.|..| ..+|..|+++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 36789999777666 45788999999999999864
No 183
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=40.79 E-value=47 Score=26.10 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=26.7
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHH-------hCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAK-------FGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 149 (487)
+..+.+++.+||+||.|.... -+..+.+. .++|+|.++..
T Consensus 42 ~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 42 EAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 344555677999999998655 35555443 35788888654
No 184
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=40.57 E-value=1.3e+02 Score=28.32 Aligned_cols=52 Identities=8% Similarity=-0.100 Sum_probs=30.6
Q ss_pred hhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCC
Q 046605 274 QECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKN 325 (487)
Q Consensus 274 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 325 (487)
+++....+..+-+++.+-+...........+..+.+++++++..+..=.+..
T Consensus 163 ~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 163 REIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 5677777653334444322211112345668889999999998866655543
No 185
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.30 E-value=1.6e+02 Score=24.56 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=29.5
Q ss_pred HHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEechh
Q 046605 111 LEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHGTS 150 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~ 150 (487)
..+.+++.+.|+||.|. ....+|+++|+|.+.+.++.
T Consensus 134 ~i~~l~~~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 134 LISKVKTENIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp HHHHHHHTTCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHCCCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 34455667999999994 46889999999999997743
No 186
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=40.19 E-value=29 Score=30.42 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=31.5
Q ss_pred eEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 8 LHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 8 ~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
+|++.+. -++-|-..-...||..|+++|++|.++=.+..
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIG 42 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4555553 55789999999999999999999999876653
No 187
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=40.19 E-value=30 Score=27.32 Aligned_cols=39 Identities=8% Similarity=0.168 Sum_probs=27.7
Q ss_pred ceEEEEEcCCCCCChHHH-HHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPT-VDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~-l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|+||+++-....|+..-+ ..|++.|.++|++|.++.-..
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 457777766667887654 356788888899999887654
No 188
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=40.14 E-value=25 Score=31.94 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=25.5
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|....++++|+|+ |+.|.+ -..|++.|.++||+|+.++-..
T Consensus 1 M~~~~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 1 MQRNTLKHRILIT--GGAGFI--GGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp ------CCEEEEE--TTTSHH--HHHHHHHHHHTTCCEEEECCCS
T ss_pred CCcccCCCeEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecCC
Confidence 4433446777766 444544 3478999999999999987543
No 189
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=40.10 E-value=1.5e+02 Score=24.16 Aligned_cols=145 Identities=11% Similarity=0.108 Sum_probs=79.9
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
+|.|-|-+||.+ +....++....|+.+|..+=..+.+-.. .|+.+.+-.+ + ...
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR----------~p~~l~~~~~-----------~---a~~ 64 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR----------TPDYMFEYAE-----------T---ARE 64 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------SHHHHHHHHH-----------H---TTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC----------CHHHHHHHHH-----------H---HHh
Confidence 457888888887 5677888888888888876555544322 5654432111 0 000
Q ss_pred cCccccccccC----chhHHHHhhcCCcEeccCcccc-chhhH--HHHHHH--hhceEe-ecccccccccCCccCHHHHH
Q 046605 366 EAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAE-QFYNE--KIVNEV--LKIGIG-VGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 366 ~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~D-Q~~~a--~rv~~~--~G~G~~-l~~~~~~~~~~~~~~~~~l~ 435 (487)
..++.+|.=.| +.++..++ .-.|+|.+|.-.. -.... .-++ + .|+.+. +..+ +.+-.++.-+.
T Consensus 65 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~-----~a~~~nAallA 137 (170)
T 1xmp_A 65 RGLKVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIG-----KAGSTNAGLLA 137 (170)
T ss_dssp TTCCEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSS-----HHHHHHHHHHH
T ss_pred CCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC-----CcchHHHHHHH
Confidence 01222665555 33444444 3689999997542 11111 1122 4 455432 1221 00134555555
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 436 KAVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
..|.. +. |+.++++.+.+++.+++.+.+
T Consensus 138 aqIla-~~---d~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 138 AQILG-SF---HDDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHH-TT---CHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHc-cC---CHHHHHHHHHHHHHHHHHHHh
Confidence 54442 23 679999999999999876554
No 190
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=39.78 E-value=39 Score=30.13 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=30.3
Q ss_pred HHHHHHhhCCCCEEEeCCCCc------chHHHHHHhCCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP------WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~------~~~~~A~~~giP~v~~~~ 148 (487)
.+.++++..+||+|++-..+. .+..+|..+|+|.+...+
T Consensus 103 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 103 ILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 455556666899999877653 578899999999998754
No 191
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=39.67 E-value=61 Score=24.35 Aligned_cols=39 Identities=26% Similarity=0.340 Sum_probs=25.3
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~ 148 (487)
+..+.+++.+||+||.|.... .+..+.+.+ ++|+|.++.
T Consensus 38 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 38 SGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 344455667899999998654 344444322 678888765
No 192
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=39.57 E-value=23 Score=32.13 Aligned_cols=37 Identities=8% Similarity=-0.050 Sum_probs=28.1
Q ss_pred eEEEEEcCCCCC-C--hHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHG-H--MIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~G-H--~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|||+|+..+... + ......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 689999877422 1 234577999999999999988764
No 193
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=38.90 E-value=53 Score=24.50 Aligned_cols=41 Identities=20% Similarity=0.400 Sum_probs=27.7
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
+..+.++..+||+||.|...+ .+..+.+.+ ++|.|.++...
T Consensus 38 ~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 38 AFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 444566677899999997654 455555443 57888887653
No 194
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=38.79 E-value=24 Score=32.46 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=27.4
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|||+|+-.|+.| ..+|..|.++||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 689999777766 357888999999999998765
No 195
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=38.71 E-value=1.6e+02 Score=23.96 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=76.8
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhccc
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHE 366 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~ 366 (487)
|.|-|-+||.+ +....++....|+.+|..+=..+-+-.. .|+.+.+.. .. +...
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR----------tp~~l~~~~-----------~~---~~~~ 59 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHR----------TPDKMFDYA-----------ET---AKER 59 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT----------CHHHHHHHH-----------HH---TTTT
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcC----------CHHHHHHHH-----------HH---HHhC
Confidence 46777788877 5677888888888888765555444321 554433211 10 1111
Q ss_pred CccccccccCc----hhHHHHhhcCCcEeccCccccc-hhhH--HHHHHHh--hceEee-cccccccccCCccCHHHHHH
Q 046605 367 AVGGFVTHCGW----NSILEGVTAGVPLVTWPVYAEQ-FYNE--KIVNEVL--KIGIGV-GIQKWCRIVGDFVKREAIVK 436 (487)
Q Consensus 367 ~~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ-~~~a--~rv~~~~--G~G~~l-~~~~~~~~~~~~~~~~~l~~ 436 (487)
.++.+|.=.|. .++..++. -.|+|.+|.-.-. .... .-++ ++ |+|+.. ..+ ..+-.++.-+..
T Consensus 60 g~~ViIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~v-qmp~gvpVatV~I~-----~ag~~nAa~lAa 132 (166)
T 3oow_A 60 GLKVIIAGAGGAAHLPGMVAAKT-TLPVLGVPVKSSTLNGQDSLLSIV-QMPAGIPVATFAIG-----MAGAKNAALFAA 132 (166)
T ss_dssp TCCEEEEEECSSCCHHHHHHHTC-SSCEEEEECCCTTTTTHHHHHHHH-TCCTTSCCEECCST-----HHHHHHHHHHHH
T ss_pred CCcEEEEECCcchhhHHHHHhcc-CCCEEEeecCcCCCCCHHHHHHHh-cCCCCCceEEEecC-----CccchHHHHHHH
Confidence 12337766553 34444433 5899999974321 1111 1121 33 444332 221 000234444443
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 437 AVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 437 ~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
.|..+ + |+.++++.+.+++.+++.+.+
T Consensus 133 ~Il~~-~---d~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 133 SILQH-T---DINIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp HHHGG-G---CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcC-C---CHHHHHHHHHHHHHHHHHHHh
Confidence 33322 2 689999999999999876644
No 196
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=38.53 E-value=80 Score=30.42 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=24.1
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.||+++..+ ...+.+++++.+.|++|+++.+.
T Consensus 2 k~ilI~g~g-----~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANRG-----EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCCH-----HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCCC-----HHHHHHHHHHHHcCCEEEEEecc
Confidence 467776532 25668999999999999988753
No 197
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=38.46 E-value=28 Score=31.74 Aligned_cols=31 Identities=23% Similarity=0.198 Sum_probs=27.0
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
|.||.|+-.+..|. ++|+.|.++||+|+++-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 56899999988884 78999999999999874
No 198
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=38.28 E-value=36 Score=28.26 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=24.3
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++|+++ |+.|-+ -..|++.|.++||+|+.++..
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 567665 444533 367899999999999998764
No 199
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=38.26 E-value=74 Score=23.07 Aligned_cols=40 Identities=10% Similarity=0.129 Sum_probs=26.0
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... .+..+.+.+ ++|.+.++..
T Consensus 36 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 36 EALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 344455667899999998654 355444433 5788877653
No 200
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=38.21 E-value=21 Score=31.13 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=28.9
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.+|||.|+-.|..|- .||+.|.++||+|+.+..+
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 568999999998884 5899999999999987663
No 201
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.02 E-value=55 Score=24.53 Aligned_cols=40 Identities=25% Similarity=0.384 Sum_probs=24.9
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
..+.+++.+||+||.|.... .+..+.+.+ .+|+|.++...
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 34455677899999997654 344444433 58888886653
No 202
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=37.77 E-value=35 Score=29.39 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=30.1
Q ss_pred EEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 10 IFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 10 Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
|+|++ -++-|-..-...||..|+++|++|.++-.+..
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 44443 45889999999999999999999999977653
No 203
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=37.73 E-value=44 Score=29.59 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=29.9
Q ss_pred HHHHHHhhCCCCEEEeCCCCc------chHHHHHHhCCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP------WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~------~~~~~A~~~giP~v~~~~ 148 (487)
.+.++++..+||+|++...+. .+..+|+.+|+|.+...+
T Consensus 107 ~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 107 VLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 445555556899999877553 578899999999998754
No 204
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=37.71 E-value=2e+02 Score=26.71 Aligned_cols=40 Identities=13% Similarity=0.023 Sum_probs=32.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAP 48 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 48 (487)
-++++-.++.|=..=++.++..+..+|..|.|+..+....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 3456667788999999999999999999999998876544
No 205
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=37.52 E-value=1.5e+02 Score=27.25 Aligned_cols=99 Identities=15% Similarity=0.179 Sum_probs=56.3
Q ss_pred eEEEEEcCCCCC--C--hHHHHHHHHHHHhCCCeEEEEeCCCCccchhhhhhhhhccCcceeEEEeeCCCccCCCCCCCc
Q 046605 8 LHIFFFPFLAHG--H--MIPTVDMAKLFTTRGVKASVITTPGNAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPEGWE 83 (487)
Q Consensus 8 ~~Il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~~~~ 83 (487)
.-|++.|..+.. . ..-+..|++.|.++|++|.++..+.-.+..++..... + -+...+ . +
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~---~--~~~~~l---------~-g-- 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM---E--TKPIVA---------T-G-- 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC---S--SCCEEC---------T-T--
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc---c--cccEEe---------e-C--
Confidence 445666655432 1 2358899999999999998876665444333321100 0 000000 0 0
Q ss_pred ccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEec
Q 046605 84 NLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~ 148 (487)
. . + ..++..+++ +.|++|+.- .....+|..+|+|.|.+..
T Consensus 249 ~---~-s-----------------l~e~~ali~--~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 249 K---F-Q-----------------LGPLAAAMN--RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp C---C-C-----------------HHHHHHHHH--TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred C---C-C-----------------HHHHHHHHH--hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 0 0 0 123445555 779988742 2566789999999999854
No 206
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=37.49 E-value=35 Score=27.77 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=28.9
Q ss_pred eEEEEEc-CC--CCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFP-FL--AHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~-~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.+|+++| ++ ..--.++...|++.|.++|.+|.|..+|-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677776 22 11234689999999999999999999974
No 207
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=37.43 E-value=20 Score=32.96 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 23 PTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 23 p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
.-.+||+++.++|++|+|++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 445789999999999999997643
No 208
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=37.38 E-value=1e+02 Score=28.84 Aligned_cols=40 Identities=8% Similarity=0.003 Sum_probs=33.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAP 48 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 48 (487)
-+++...++.|-..-.+.++..++.+|..|.|++.+...+
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 3566677899999999999999999999999999876543
No 209
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=37.23 E-value=54 Score=25.59 Aligned_cols=42 Identities=19% Similarity=0.209 Sum_probs=27.6
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechhH
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTSF 151 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 151 (487)
+..+.++..+||+||.|.... .+..+.+.+ .+|+|.++....
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 42 DALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 344555667899999997654 344444443 688888876543
No 210
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=37.14 E-value=34 Score=27.96 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=29.1
Q ss_pred eEEEEEc-CC--CCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFP-FL--AHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~-~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.+|+++| ++ ..--.++...|++.|.++|.+|.|..+|-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677776 33 11234689999999999999999999973
No 211
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=36.70 E-value=37 Score=30.79 Aligned_cols=33 Identities=27% Similarity=0.292 Sum_probs=24.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+|+|+ |+.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 56665 444544 2578899999999999988654
No 212
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=36.69 E-value=33 Score=31.53 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=27.3
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 45799999877777 6789999999999998754
No 213
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=36.65 E-value=37 Score=29.99 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=31.1
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
..|+|..-|+-|-..-...||..|+++|++|.++=.+.
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 45666556788999999999999999999999985543
No 214
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=36.57 E-value=33 Score=32.33 Aligned_cols=38 Identities=8% Similarity=-0.027 Sum_probs=29.0
Q ss_pred CceEEEEEcCCCCC-C---hHHHHHHHHHH-HhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHG-H---MIPTVDMAKLF-TTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~G-H---~~p~l~La~~L-~~rGh~Vt~~~~ 43 (487)
+++||+++..+..+ | +.....++++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 46899999766444 3 23578899999 999999998864
No 215
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=36.57 E-value=60 Score=26.28 Aligned_cols=43 Identities=16% Similarity=0.322 Sum_probs=31.8
Q ss_pred hhHHHHHHHhhCCCCEEEeCCCCcc---------------hHHHHHHhCCCeEEEech
Q 046605 107 LQKPLEQLLQEHKPDCLVADMFFPW---------------ATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 107 ~~~~l~~~l~~~~pDlVI~D~~~~~---------------~~~~A~~~giP~v~~~~~ 149 (487)
+...+.+++++.+||.+..+..|+. ...++...|+|+.-+.+.
T Consensus 47 i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~ 104 (158)
T 1hjr_A 47 IYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAAR 104 (158)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHH
T ss_pred HHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 4557788888889999998876542 134567778998888664
No 216
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=36.48 E-value=24 Score=32.04 Aligned_cols=33 Identities=21% Similarity=0.160 Sum_probs=26.6
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+|+||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 478999997777764 678999999999998854
No 217
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=36.27 E-value=59 Score=25.24 Aligned_cols=42 Identities=17% Similarity=0.144 Sum_probs=29.0
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
.+..+.+++.+||+||.|.... .+..+.+.+ ++|+|.++...
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 4556677778999999998654 455555443 57888886643
No 218
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=36.25 E-value=1.8e+02 Score=24.36 Aligned_cols=96 Identities=13% Similarity=0.148 Sum_probs=56.9
Q ss_pred hhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcE
Q 046605 273 EQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLI 352 (487)
Q Consensus 273 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~ 352 (487)
..++-++|..++ ..+||-| .........++..+.+-++|-+++..... + + ...+.
T Consensus 47 A~~lg~~LA~~G---~~vVsGg-----~~GiM~aa~~gAl~~GG~~iGVlP~e~~~------~---~--------~~~~~ 101 (195)
T 1rcu_A 47 CLELGRTLAKKG---YLVFNGG-----RDGVMELVSQGVREAGGTVVGILPDEEAG------N---P--------YLSVA 101 (195)
T ss_dssp HHHHHHHHHHTT---CEEEECC-----SSHHHHHHHHHHHHTTCCEEEEESTTCCC------C---T--------TCSEE
T ss_pred HHHHHHHHHHCC---CEEEeCC-----HHHHHHHHHHHHHHcCCcEEEEeCCcccC------C---C--------Cccee
Confidence 466777776542 5666633 34555666666666677788777653321 1 0 12233
Q ss_pred ee--cccc-hHhh-hcccCccccccccCchhHHH---HhhcCCcEeccC
Q 046605 353 IR--GWAP-QVLI-LDHEAVGGFVTHCGWNSILE---GVTAGVPLVTWP 394 (487)
Q Consensus 353 ~~--~~vp-~~~l-l~~~~~~~~I~HGG~gs~~e---al~~GvP~l~~P 394 (487)
+. ..++ -+.+ ...++. .++--||.||.-| ++.+++|+++++
T Consensus 102 ~~~~~~f~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 102 VKTGLDFQMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp EECCCCHHHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred eecCCCHHHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEEC
Confidence 33 3455 2334 344443 4667799998766 577999999997
No 219
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=36.24 E-value=25 Score=34.60 Aligned_cols=34 Identities=26% Similarity=0.181 Sum_probs=28.1
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEE
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVF 146 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 146 (487)
++.+.+++.+||++|... ....+|+++|||++.+
T Consensus 392 el~~~i~~~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDEYQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHTTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHhcCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 566777788999999974 4677899999999865
No 220
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=36.11 E-value=1.5e+02 Score=28.38 Aligned_cols=34 Identities=6% Similarity=-0.065 Sum_probs=25.3
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~ 43 (487)
.+++||+++..++ .+..++..|+++ |++++++.+
T Consensus 19 ~~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 19 QSHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp CSSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 3568999998773 467788888765 888777755
No 221
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=36.05 E-value=22 Score=32.48 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=27.4
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
.+|+||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 567899999666554 6789999999999998754
No 222
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=36.01 E-value=58 Score=23.91 Aligned_cols=40 Identities=23% Similarity=0.301 Sum_probs=26.1
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
..+.++..+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 39 a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 39 AVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 33444556899999998655 355555443 58888887653
No 223
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=35.84 E-value=60 Score=23.91 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=26.9
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~----giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... -+..+++.+ .+|.|.++..
T Consensus 37 ~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 37 GLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 444556667899999998654 355555544 5787777654
No 224
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=35.68 E-value=56 Score=31.71 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=34.1
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCcc
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTT-RGVKASVITTPGNAP 48 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~ 48 (487)
.--+++...|+.|=..-++.+|..++. .|..|.+++.+...+
T Consensus 203 G~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~ 245 (454)
T 2r6a_A 203 SDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQ 245 (454)
T ss_dssp TCEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 345677778899999999999999886 589999999875443
No 225
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=35.65 E-value=37 Score=28.63 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=23.9
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 456554 4445443 57899999999999998764
No 226
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=35.42 E-value=38 Score=34.80 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=25.8
Q ss_pred HHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
++.+.+++.+||+||+-.+ -+....+-......++-++++
T Consensus 66 ~~~~~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 3455666779999887654 334455555556667877765
No 227
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=35.31 E-value=44 Score=29.50 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=29.5
Q ss_pred HHHHHHhhCCCCEEEeCCCCc------chHHHHHHhCCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP------WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~------~~~~~A~~~giP~v~~~~ 148 (487)
.+.++++..+||+|++...+. .+..+|+.+|+|.+...+
T Consensus 104 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 344455556899999877553 578899999999998754
No 228
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=35.11 E-value=78 Score=27.41 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=27.0
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHH----hCCCeEEEechh
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAK----FGIPRLVFHGTS 150 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~----~giP~v~~~~~~ 150 (487)
.+.++.+.++||++|+-+--. .+...|+. .|+|+|+++-.+
T Consensus 55 ~~~~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 101 (283)
T 1qv9_A 55 MALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAP 101 (283)
T ss_dssp HHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred HhhhhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCc
Confidence 344455788999977654332 45545554 499999997654
No 229
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=34.78 E-value=89 Score=23.47 Aligned_cols=39 Identities=10% Similarity=0.001 Sum_probs=31.6
Q ss_pred CCCceEEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEe
Q 046605 4 GICQLHIFFFPFLAHGHMIP-TVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 42 (487)
..+++||++++..+.|.-.- ...|-+.+.+.|.++.+-.
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 36778999999999999874 6788888889999865444
No 230
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=34.69 E-value=1.9e+02 Score=23.82 Aligned_cols=145 Identities=11% Similarity=0.134 Sum_probs=79.4
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
.+.|-|-+||.+ +....++....|+.+|..+=..+-+-.. .|+.+.+-.+ + ...
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR----------~p~~l~~~~~-----------~---a~~ 74 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR----------TPDRLADYAR-----------T---AAE 74 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------CHHHHHHHHH-----------H---TTT
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC----------CHHHHHHHHH-----------H---HHh
Confidence 345777788877 5677888888888888876555444322 5654332111 0 000
Q ss_pred cCccccccccC----chhHHHHhhcCCcEeccCcccc-chhhH--HHHHHH--hhceEe-ecccccccccCCccCHHHHH
Q 046605 366 EAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAE-QFYNE--KIVNEV--LKIGIG-VGIQKWCRIVGDFVKREAIV 435 (487)
Q Consensus 366 ~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~D-Q~~~a--~rv~~~--~G~G~~-l~~~~~~~~~~~~~~~~~l~ 435 (487)
..++.+|.=.| +.++..++ .-+|+|.+|.-.. -.... .-++ + .|+.+. +..+ +.+-.++.-+.
T Consensus 75 ~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~-----~a~~~nAallA 147 (182)
T 1u11_A 75 RGLNVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIG-----ASGAKNAALLA 147 (182)
T ss_dssp TTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSS-----HHHHHHHHHHH
T ss_pred CCCcEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecC-----CccchHHHHHH
Confidence 01222665554 34555555 4799999997532 11111 1222 4 455532 2221 00134555555
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHhc
Q 046605 436 KAVNEIMMGDRAEEMRSRAKAFGEMAKRAVEN 467 (487)
Q Consensus 436 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~~ 467 (487)
..|.. +. |+.++++.+.+++.+.+.+.+
T Consensus 148 aqIla-~~---d~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 148 ASILA-LY---NPALAARLETWRALQTASVPN 175 (182)
T ss_dssp HHHHG-GG---CHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHc-cC---CHHHHHHHHHHHHHHHHHHHH
Confidence 44432 23 679999999999998865544
No 231
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.49 E-value=42 Score=32.72 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=28.0
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEE
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVF 146 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 146 (487)
++.+++++.+||+||.++ ....+|+++|+|++.+
T Consensus 376 ~l~~~i~~~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNEGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHSCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred HHHHHHHhcCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 466677778999999886 3577899999999987
No 232
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=34.48 E-value=46 Score=29.17 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=30.8
Q ss_pred CCceEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 5 ICQLHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 5 ~~~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
++|++.+|++ -..-|=..-.+.|++.|.++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 5566776665 3467999999999999999999999983
No 233
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=34.35 E-value=58 Score=25.38 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=27.3
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
+..+.+++.+||+||.|.... .+..+.+.+ ++|+|.++...
T Consensus 49 ~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 49 QALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 444556677999999998655 355554443 57888876543
No 234
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=34.29 E-value=22 Score=33.64 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=25.2
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
.|||+|+-.|-.| +.+|..|+++||+|+++=
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 3789998766544 788999999999999983
No 235
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=34.28 E-value=27 Score=31.65 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=26.7
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4689999877766 46899999999999988543
No 236
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=34.14 E-value=44 Score=33.19 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=26.2
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHh-------CCCeEEE
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKF-------GIPRLVF 146 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~-------giP~v~~ 146 (487)
++.+.+++.+||+||..+. +..+|+.+ |||++.+
T Consensus 429 ~l~~~i~~~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHTCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhcCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 4556666789999999963 45577777 9999987
No 237
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=33.86 E-value=41 Score=28.00 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=28.6
Q ss_pred eEEEEEcC-C--CCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPF-L--AHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~-~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.+|+++|. + ..--.++...|++.|.++|.+|.|..+|-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 46777762 2 11234688999999999999999999973
No 238
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.80 E-value=57 Score=24.85 Aligned_cols=42 Identities=7% Similarity=0.094 Sum_probs=27.1
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEechhH
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGTSF 151 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~~~ 151 (487)
+..+.+++.+||+||.|.... .+..+.+.+ ++|+|.++....
T Consensus 41 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 91 (140)
T 3grc_A 41 QALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAR 91 (140)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHH
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCC
Confidence 334455667899999998655 355554432 578888766543
No 239
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=33.53 E-value=1e+02 Score=25.12 Aligned_cols=44 Identities=16% Similarity=0.369 Sum_probs=32.6
Q ss_pred hhhHHHHHHHhhCCCCEEEeCCCCcc---------------hHHHHHHhCCCeEEEech
Q 046605 106 KLQKPLEQLLQEHKPDCLVADMFFPW---------------ATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 106 ~~~~~l~~~l~~~~pDlVI~D~~~~~---------------~~~~A~~~giP~v~~~~~ 149 (487)
.+...+.+++++++||.+.++..|+. +..++...|+|+.-+++.
T Consensus 50 ~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 50 RIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 34567888899999999998876641 234466779999888664
No 240
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=33.45 E-value=84 Score=24.00 Aligned_cols=40 Identities=15% Similarity=0.211 Sum_probs=26.7
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 42 KALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 444556678999999998655 344444332 4788888654
No 241
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=33.38 E-value=23 Score=33.20 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=28.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+.+|||.|+-.|..| ..+|..|+++||+|++....
T Consensus 27 ~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 346799999887776 46899999999999998764
No 242
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=33.31 E-value=66 Score=29.26 Aligned_cols=39 Identities=5% Similarity=-0.088 Sum_probs=29.6
Q ss_pred ceEEEEEcCCCCC-C---hHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHG-H---MIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
++||+++..+..+ | +.....++++|.++||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4688888766333 3 3467899999999999999998543
No 243
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=33.29 E-value=30 Score=34.06 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=28.0
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEe
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFH 147 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~ 147 (487)
++.+.+++.+||++|... ....+|+.+|||++.+.
T Consensus 408 el~~~i~~~~pDL~ig~~---~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 408 EFEEFVKRIKPDLIGSGI---KEKFIFQKMGIPFREMH 442 (492)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHTTCCEEESS
T ss_pred HHHHHHHhcCCcEEEeCc---chhHHHHHcCCCEEecc
Confidence 456667778999999974 46789999999999653
No 244
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=33.28 E-value=43 Score=28.01 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=28.7
Q ss_pred eEEEEEcC-C--CCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPF-L--AHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~-~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.+|+++|. + ..--.++...|++.|.++|.+|.|+.+|-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 46777762 2 11234688999999999999999999974
No 245
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=33.26 E-value=23 Score=34.26 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=24.8
Q ss_pred CCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 3 SGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 3 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
.+.++|||.|+-.|..| +.+|..|++ ||+|+.+-.
T Consensus 32 r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 32 RGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp ---CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECS
T ss_pred cccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEec
Confidence 34667899999766555 456778887 999998764
No 246
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=33.19 E-value=36 Score=30.29 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=25.2
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+||+|+- + |.+- ..|++.|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 46777773 5 6554 46899999999999999864
No 247
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=33.18 E-value=81 Score=23.49 Aligned_cols=39 Identities=10% Similarity=0.192 Sum_probs=28.5
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|.+.++++||+++- .+-.-...+.+.|.+.|++|+.+.+
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAAD 39 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeCC
Confidence 66667788999985 3555567788889999999987654
No 248
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=33.04 E-value=22 Score=32.35 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=27.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++++||.|+-.|..|+ .||..|+++||+|+++...
T Consensus 13 ~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 3567899997776665 5888999999999987653
No 249
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=33.02 E-value=23 Score=32.61 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=26.3
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+. +++.||.|+-.|..| ..+|..|+++||+|+++-..
T Consensus 1 m~~-~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MAS-PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCC-CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 543 567899999776665 57899999999999998653
No 250
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=32.95 E-value=52 Score=27.78 Aligned_cols=40 Identities=8% Similarity=0.137 Sum_probs=28.5
Q ss_pred CCceEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTV-DMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~ 44 (487)
++|+||+++-....|+..-+. .+++.|.+.|++|.++--.
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 357899888766678776544 4567777789998887653
No 251
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.93 E-value=62 Score=24.46 Aligned_cols=40 Identities=18% Similarity=0.338 Sum_probs=26.4
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
+..+.+++.+||+||.|...+ -+..+.+.+ ++|+|.++..
T Consensus 40 ~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 40 DAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 344555566899999998654 355554443 4788887654
No 252
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=32.92 E-value=56 Score=30.22 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchh
Q 046605 300 TSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNS 379 (487)
Q Consensus 300 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs 379 (487)
+.+-...+.+++.+-..+.||.+.+.... .++.++++...+-++|+. ||=+.-...
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------------~rlL~~lD~~~i~~~PK~--~~GySDiTa 118 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS----------------------NGLLKYLDYDLIRENPKF--FCGYSDITA 118 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----------------------GGGGGGCCHHHHHTSCCE--EEECGGGHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH----------------------HHHHhhcChhHHHhCCeE--EEEecchHH
Confidence 45668889999998889999998876521 344455555555555655 666666666
Q ss_pred HHHHhh--cCCcEeccCc
Q 046605 380 ILEGVT--AGVPLVTWPV 395 (487)
Q Consensus 380 ~~eal~--~GvP~l~~P~ 395 (487)
++-+++ .|++.+.=|.
T Consensus 119 L~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 119 LNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHHHHCBCEEECCC
T ss_pred HHHHHHHhhCCcEEEccc
Confidence 666666 3666665554
No 253
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=32.83 E-value=56 Score=28.74 Aligned_cols=40 Identities=10% Similarity=0.039 Sum_probs=26.7
Q ss_pred CCCceEEEEEcCCCC--CChHHHHH-HHHHHHhCCCeEEEEeC
Q 046605 4 GICQLHIFFFPFLAH--GHMIPTVD-MAKLFTTRGVKASVITT 43 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~~ 43 (487)
.+.++||+++..... |...-+.. +++.|.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 356789988875543 54444444 56677778999888754
No 254
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=32.79 E-value=31 Score=32.01 Aligned_cols=38 Identities=8% Similarity=0.071 Sum_probs=27.9
Q ss_pred CceEEEEEcCCCCC-ChH---HHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHG-HMI---PTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~G-H~~---p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++||+++..+..+ |-. ....++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 46889888755332 222 567789999999999998864
No 255
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=32.74 E-value=54 Score=29.47 Aligned_cols=39 Identities=10% Similarity=0.260 Sum_probs=30.1
Q ss_pred CCceEEEEEcCCCCCChHHH--HHHHHHHHhCC-CeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPT--VDMAKLFTTRG-VKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~--l~La~~L~~rG-h~Vt~~~~~ 44 (487)
.++.||||++ +..+|-.+. ..|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4689999994 444886543 57788888888 999999874
No 256
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=32.71 E-value=56 Score=24.36 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=25.3
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHH-------hCCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAK-------FGIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~-------~giP~v~~~~ 148 (487)
+..+.+++.+||+||.|.... .+..+.+. .++|+|.++.
T Consensus 38 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 38 DALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 444556667899999998654 45554443 2467777754
No 257
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=32.63 E-value=76 Score=23.11 Aligned_cols=39 Identities=18% Similarity=0.435 Sum_probs=25.5
Q ss_pred HHHHhhCCCCEEEeCCCCc--chHHHHHH----hCCCeEEEechh
Q 046605 112 EQLLQEHKPDCLVADMFFP--WATDAAAK----FGIPRLVFHGTS 150 (487)
Q Consensus 112 ~~~l~~~~pDlVI~D~~~~--~~~~~A~~----~giP~v~~~~~~ 150 (487)
.+.++..+||+||.|...+ .+..+++. ..+|.+.++...
T Consensus 38 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 38 LEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 3444556899999998654 35544443 368888886643
No 258
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=32.52 E-value=40 Score=29.62 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=30.1
Q ss_pred EEEE-cCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 10 IFFF-PFLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 10 Il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
|.|+ .-++-|-..-...||..|+++|++|.++=.+..
T Consensus 5 I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 5 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4443 356889999999999999999999999976654
No 259
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.43 E-value=38 Score=30.97 Aligned_cols=32 Identities=9% Similarity=0.155 Sum_probs=26.8
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+|+|+++..+ ....+++++.++||+|.++...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 3689998876 5678999999999999988774
No 260
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=32.31 E-value=85 Score=23.04 Aligned_cols=40 Identities=18% Similarity=0.321 Sum_probs=26.2
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~----giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... -+..+++.+ .+|.+.++..
T Consensus 38 ~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 38 EMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 334455667899999998654 355444443 6788877654
No 261
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=32.20 E-value=1.4e+02 Score=27.25 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=32.1
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEe
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFH 147 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~ 147 (487)
..+.+.+++.+..+|+++..+. .+..+|+..|++.+.+.
T Consensus 229 ~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 229 AKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp HHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 3677788889999999999776 46778999999987664
No 262
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=32.12 E-value=52 Score=28.33 Aligned_cols=40 Identities=10% Similarity=0.153 Sum_probs=24.4
Q ss_pred CCCceEEEEEc-CCCC----CChHH-HH-HHHHHHHhCCCeEEEEeC
Q 046605 4 GICQLHIFFFP-FLAH----GHMIP-TV-DMAKLFTTRGVKASVITT 43 (487)
Q Consensus 4 ~~~~~~Il~~~-~~~~----GH~~p-~l-~La~~L~~rGh~Vt~~~~ 43 (487)
-.+|+||+++. .|-. +-.+- ++ .+++.|.++||+|.++--
T Consensus 22 ~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 22 SNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp --CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 36788998886 4432 23443 22 456666778999987654
No 263
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=32.00 E-value=2.1e+02 Score=24.47 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=24.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|+++++.++.| --..+|+.|+++|++|.++....
T Consensus 8 k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 8 KVALVTGASRG---IGRAIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCCc
Confidence 56667666544 34688999999999998875543
No 264
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.90 E-value=31 Score=31.02 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=26.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|++.||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 346789999655544 5689999999999998754
No 265
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.81 E-value=41 Score=30.31 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=25.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 467999997766664 468889999999987643
No 266
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=31.80 E-value=53 Score=29.68 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=31.4
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+..|+|+.-|+-|=..-...||..|+++|++|.++=.+.
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 344555556688899999999999999999999996554
No 267
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=31.77 E-value=57 Score=28.18 Aligned_cols=37 Identities=8% Similarity=0.183 Sum_probs=29.5
Q ss_pred CceEEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 6 CQLHIFFFPF-LAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 6 ~~~~Il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
+|..|+|... +.-|-..-...|++.|.++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 3445555544 477999999999999999999999863
No 268
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=31.76 E-value=1e+02 Score=22.43 Aligned_cols=40 Identities=25% Similarity=0.439 Sum_probs=26.6
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... .+..+.+.+ .+|++.++..
T Consensus 35 ~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 35 EADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 444556667899999998654 355444433 5788888664
No 269
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=31.70 E-value=64 Score=24.61 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=25.4
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
+..+.++..+||+||.|. .. .+..+.+.+ ++|+|.++..
T Consensus 39 ~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 39 EAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 344556667999999998 54 233333332 5888888654
No 270
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=31.67 E-value=45 Score=30.05 Aligned_cols=35 Identities=11% Similarity=0.133 Sum_probs=25.2
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+++|+|+ |+.|.+- ..++++|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 5667766 4445443 567899999999999887653
No 271
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=31.55 E-value=73 Score=24.20 Aligned_cols=39 Identities=5% Similarity=0.106 Sum_probs=25.3
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|...+++++|+++- .+-.-...|.+.|.+.|++|..+.+
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 56567788999884 4555667788888888998775554
No 272
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=31.36 E-value=51 Score=29.51 Aligned_cols=40 Identities=10% Similarity=0.087 Sum_probs=31.9
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
|..|+|..-|+-|-..-...||..|+++|++|.++=.+..
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q 41 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3456665566889999999999999999999998855443
No 273
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=31.33 E-value=64 Score=23.87 Aligned_cols=37 Identities=16% Similarity=0.397 Sum_probs=24.3
Q ss_pred HHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 113 QLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 113 ~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
+.++..+||+||.|...+ .+..+++.+ .+|.|.++..
T Consensus 41 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 41 DIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 344456899999997654 355554443 5788888664
No 274
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=31.21 E-value=73 Score=24.42 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=24.8
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEec
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHG 148 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~ 148 (487)
..+.++..+||+||.|...+ .+..+++.+ ++|.|.++.
T Consensus 41 al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 41 AIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 34455667899999998654 455555443 577777754
No 275
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=31.18 E-value=79 Score=27.29 Aligned_cols=31 Identities=26% Similarity=0.158 Sum_probs=23.2
Q ss_pred CCCCEEEeCCCCcc-------hHHHHHHhCCCeEEEec
Q 046605 118 HKPDCLVADMFFPW-------ATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 118 ~~pDlVI~D~~~~~-------~~~~A~~~giP~v~~~~ 148 (487)
.+||+|++|..-.. |..+...+++|.|.+.=
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 47999999987654 34456666999999853
No 276
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=31.18 E-value=3.2e+02 Score=26.07 Aligned_cols=140 Identities=14% Similarity=0.168 Sum_probs=76.1
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHH---hcCCCcEeecccchHh
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKR---MEGKGLIIRGWAPQVL 361 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~---~~~~nv~~~~~vp~~~ 361 (487)
..+.|-|-+||.+ +....++....|+.+|...-..+.+-.. +|+.+.+- ....+.
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saHR----------~p~~~~~~~~~~~~~g~---------- 321 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAHK----------GPDETLRIKAEYEGDGI---------- 321 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT----------CHHHHHHHHHHHHTTCC----------
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeeccC----------CHHHHHHHHHHHHHCCC----------
Confidence 3457888888877 5677788888888888876555444322 56443221 111111
Q ss_pred hhcccCccccccccC----chhHHHHhhcCCcEeccCccccchhhHHH--HHHH--hhceEeecccccccccCCccCHHH
Q 046605 362 ILDHEAVGGFVTHCG----WNSILEGVTAGVPLVTWPVYAEQFYNEKI--VNEV--LKIGIGVGIQKWCRIVGDFVKREA 433 (487)
Q Consensus 362 ll~~~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ~~~a~r--v~~~--~G~G~~l~~~~~~~~~~~~~~~~~ 433 (487)
..| +|.=+| +.++..++ .-.|+|.+|....-...... ++ + .|+.+..-.. ..++.-
T Consensus 322 ----~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~v-qmp~g~pvatv~~--------~~nAa~ 385 (425)
T 2h31_A 322 ----PTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSL-RLPSGLGCSTVLS--------PEGSAQ 385 (425)
T ss_dssp ----CEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTS-SCCSSCCCEECCC--------HHHHHH
T ss_pred ----CeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHh-cCCCCCceEEecC--------chHHHH
Confidence 013 555544 34555555 47999999974211111111 11 2 3444222112 345555
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHh
Q 046605 434 IVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVE 466 (487)
Q Consensus 434 l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~ 466 (487)
+...|.. +. |+..+++.+..+..+...+.
T Consensus 386 ~A~~Il~-~~---~~~l~~kl~~~~~~~~~~v~ 414 (425)
T 2h31_A 386 FAAQIFG-LS---NHLVWSKLRASILNTWISLK 414 (425)
T ss_dssp HHHHHHH-TT---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-cC---CHHHHHHHHHHHHHHHHHHH
Confidence 5544432 23 67888888888888775443
No 277
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=31.14 E-value=23 Score=27.80 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=26.3
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+.||+++-++..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4678888765444 57899999999999999875
No 278
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=31.06 E-value=2e+02 Score=26.39 Aligned_cols=40 Identities=3% Similarity=-0.150 Sum_probs=33.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCcc
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPGNAP 48 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~ 48 (487)
.+++.-.++.|-..=++.++..++++ |..|.|+.++....
T Consensus 30 iteI~G~pGsGKTtL~Lq~~~~~~~~g~g~~vlyId~E~s~~ 71 (333)
T 3io5_A 30 LLILAGPSKSFKSNFGLTMVSSYMRQYPDAVCLFYDSEFGIT 71 (333)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHCTTCEEEEEESSCCCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCCceEEEEeccchhh
Confidence 57788888999999999999998887 88999999876543
No 279
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=30.89 E-value=99 Score=19.29 Aligned_cols=32 Identities=6% Similarity=0.272 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHh
Q 046605 430 KREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKRAVE 466 (487)
Q Consensus 430 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~a~~ 466 (487)
+.++|...|..+|+ .+..+-..++..+-..++
T Consensus 3 ~~~dLt~~vq~LL~-----qmq~kFq~mS~~I~~riD 34 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQ-----QMQDKFQTISDQIIGRID 34 (48)
T ss_dssp CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 67899999999997 666666777776664333
No 280
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=30.83 E-value=71 Score=23.80 Aligned_cols=37 Identities=8% Similarity=0.128 Sum_probs=28.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
+.|||++++..+.|+-.-.-.|-+.+.++|.++.+-.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3478999998888887666678888888898765443
No 281
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=30.78 E-value=73 Score=24.11 Aligned_cols=40 Identities=15% Similarity=0.318 Sum_probs=25.8
Q ss_pred HHHHHhhCCCCEEEeCCCCc---chHHHHHH----hCCCeEEEechh
Q 046605 111 LEQLLQEHKPDCLVADMFFP---WATDAAAK----FGIPRLVFHGTS 150 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~---~~~~~A~~----~giP~v~~~~~~ 150 (487)
..+.++..+||+||.|.... .+..+.+. .++|+|.++...
T Consensus 46 a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 46 AVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 34445556899999997543 34444443 378999886643
No 282
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.68 E-value=37 Score=27.69 Aligned_cols=39 Identities=13% Similarity=0.290 Sum_probs=29.6
Q ss_pred eEEEEEc-CC--CCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 8 LHIFFFP-FL--AHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 8 ~~Il~~~-~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
.+|+++| +| ..--.++...|++.|.++|.+|.|+.+|-.
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 4677776 33 112346899999999999999999999843
No 283
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.67 E-value=60 Score=29.58 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=25.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.+.++|+|+ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 9 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 455677765 4445443 57889999999999988753
No 284
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=30.44 E-value=54 Score=27.25 Aligned_cols=38 Identities=21% Similarity=0.360 Sum_probs=30.7
Q ss_pred EEEEE-cCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 9 HIFFF-PFLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 9 ~Il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
.|+|+ +-|+-|=..-...||..|+++|++|.++-.+..
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34444 356889999999999999999999999977643
No 285
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.37 E-value=1e+02 Score=23.86 Aligned_cols=40 Identities=25% Similarity=0.387 Sum_probs=26.1
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
..+.++..+||+||.|.... .+..+.+.+ ++|+|.++...
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 43 AYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 34455667899999998654 344444433 58888886543
No 286
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=30.28 E-value=3e+02 Score=24.64 Aligned_cols=104 Identities=8% Similarity=0.055 Sum_probs=61.0
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCC---CccchhhhhhhhhccCcceeEEEeeCCCccCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPG---NAPHLSRSIQKASELGIELDVKIIKFPSAEAGLP 79 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~---~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~ 79 (487)
.+++||+++..+. || .+.+|..+-.+- ..+|..+.+.. ..+..++. ++.+..+|..
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~---------gIp~~~~~~~------- 146 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVG---------DIPFHYLPVT------- 146 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCT---------TSCEEECCCC-------
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHc---------CCCEEEEecc-------
Confidence 3578998887766 43 555666555443 35777665532 22333332 6777776411
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEec
Q 046605 80 EGWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~ 148 (487)
. .. ... ...++.+.+++.++|+||.-.+ -.....+-..+.-.++-+++
T Consensus 147 ~--------~~---r~~----------~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHp 195 (287)
T 3nrb_A 147 P--------AT---KAA----------QESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHH 195 (287)
T ss_dssp G--------GG---HHH----------HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred C--------cc---hhh----------HHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECc
Confidence 0 00 011 1235677788889999887654 34566677777777787755
No 287
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=30.28 E-value=50 Score=29.91 Aligned_cols=35 Identities=11% Similarity=0.018 Sum_probs=25.4
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|++|+|+ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 4566665 4455553 468899999999999988754
No 288
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=30.26 E-value=69 Score=24.95 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=28.1
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechhH
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTSF 151 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 151 (487)
+..+.++..+||+||.|.... .+..+.+.+ ++|+|.++....
T Consensus 38 ~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 38 EALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp HHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 445556667899999997654 344444433 689998876543
No 289
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=30.22 E-value=38 Score=33.65 Aligned_cols=35 Identities=20% Similarity=0.445 Sum_probs=27.9
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEe
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFH 147 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~ 147 (487)
++.+++++.+||++|.++ ....+|+.+|+|++.+.
T Consensus 340 el~~~i~~~~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 340 EVEKAIEAAAPELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred HHHHHHhhcCCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 455667777999999884 57778999999999763
No 290
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=30.17 E-value=1.1e+02 Score=28.04 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=40.4
Q ss_pred HHHHhCCceEEeccccCCCcCchhhhhhCCCCCCChhhHhhhhcCCCCCcEEEEeccCccc---CCHHHHHHHHHHHHhc
Q 046605 238 YRKALGRRAWHIGPVSLCNRNFEDKALRGKQASVDEQECLKWLNSKQPNSVVYICFGSVAN---FTSAQLMEIAMGLEAS 314 (487)
Q Consensus 238 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~a~~~~ 314 (487)
.....+.++..+|-+.+..++ . ..+++..+++..+-+++ -+|+... .....+..+.+.++++
T Consensus 103 ~~~~~p~r~~~~~~l~~~~~~--~----------a~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~ 167 (336)
T 2wm1_A 103 TVVSYPRRFVGLGTLPMQAPE--L----------AVKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERL 167 (336)
T ss_dssp HHHHSTTTEEEEECCCTTSHH--H----------HHHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHH
T ss_pred HHHhccCceeEEEeCCCcCHH--H----------HHHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHc
Confidence 344455667666655332110 0 13567777754333333 3344332 3445688889999999
Q ss_pred CCcEEEEecC
Q 046605 315 GQNFIWVVRK 324 (487)
Q Consensus 315 ~~~~i~~~~~ 324 (487)
+..+++=.+.
T Consensus 168 ~lpv~iH~~~ 177 (336)
T 2wm1_A 168 KCSLFVHPWD 177 (336)
T ss_dssp TCEEEEECCS
T ss_pred CCEEEECCCC
Confidence 8887776553
No 291
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=30.15 E-value=3e+02 Score=24.61 Aligned_cols=105 Identities=8% Similarity=0.082 Sum_probs=61.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCC--CccchhhhhhhhhccCcceeEEEeeCCCccCCCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITTPG--NAPHLSRSIQKASELGIELDVKIIKFPSAEAGLPE 80 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~v~~~~~~~~~~g~~i~~~~i~~~~~~~~~~~ 80 (487)
.+++||+|+..+. || .+.+|..+-.+- ..+|..+.+.. .....++. ++.++.+|.. .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~-------~ 148 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH---------KIPYYHFALD-------P 148 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCB-------T
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCC-------c
Confidence 4578998887776 43 555666554432 36777665532 22332222 6777777520 0
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHhhhHHHHHHHhhCCCCEEEeCCC-CcchHHHHHHhCCCeEEEech
Q 046605 81 GWENLDAITNEVNRELIVKFYMATTKLQKPLEQLLQEHKPDCLVADMF-FPWATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVI~D~~-~~~~~~~A~~~giP~v~~~~~ 149 (487)
. . ... ...++.+.+++.++|+||.-.+ -.....+-..+.-.++-++++
T Consensus 149 --~------~---r~~----------~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 149 --K------D---KPG----------QERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp --T------B---HHH----------HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred --C------C---HHH----------HHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 0 0 011 1235677788889999887654 345566667777777777653
No 292
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=30.11 E-value=57 Score=27.04 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=26.9
Q ss_pred ceEEEEEcCCCCCChHHHH-HHHHHHHh-CCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTV-DMAKLFTT-RGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l-~La~~L~~-rGh~Vt~~~~~ 44 (487)
||||+++-....|+..-+. .+++.|.+ +|++|.++--.
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 4688888766678776554 45777777 89998887654
No 293
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=30.09 E-value=60 Score=24.59 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=0.0
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEec
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHG 148 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~ 148 (487)
.+..+.+++.+||+||.|.... .+..+.+.+ .+|+|.++.
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 87 (137)
T 3hdg_A 41 EEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISA 87 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCC
T ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEec
No 294
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=30.08 E-value=67 Score=23.65 Aligned_cols=39 Identities=21% Similarity=0.359 Sum_probs=24.0
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
..+.++..+||+||.|.... -+..+++.+ .+|.+.++..
T Consensus 37 a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 37 ALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 33445556899999998654 355554433 5788877553
No 295
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=30.07 E-value=2e+02 Score=25.33 Aligned_cols=31 Identities=26% Similarity=0.286 Sum_probs=23.5
Q ss_pred CCCCEEE-eCCCCc-chHHHHHHhCCCeEEEec
Q 046605 118 HKPDCLV-ADMFFP-WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 118 ~~pDlVI-~D~~~~-~~~~~A~~~giP~v~~~~ 148 (487)
..||+|| +|+..- .+..=|..+|||+|.+.-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivD 189 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALAD 189 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 5899855 676554 566679999999998854
No 296
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=30.06 E-value=65 Score=25.04 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=27.6
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
.+..+.+++.+||+||.|.... .+..+.+.+ .+|+|.++..
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 98 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAH 98 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEcc
Confidence 4455666677999999998654 355554443 5788877654
No 297
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=30.05 E-value=77 Score=24.41 Aligned_cols=37 Identities=11% Similarity=-0.083 Sum_probs=26.3
Q ss_pred EEEEE-cCCCCC--ChHHHHHHHHHHHhCCCeE-EEEeCCC
Q 046605 9 HIFFF-PFLAHG--HMIPTVDMAKLFTTRGVKA-SVITTPG 45 (487)
Q Consensus 9 ~Il~~-~~~~~G--H~~p~l~La~~L~~rGh~V-t~~~~~~ 45 (487)
|++|+ +.+.+| .....+.+|.++.+.||+| .++-..+
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 44444 444444 4567789999999999999 8887753
No 298
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=29.67 E-value=59 Score=26.92 Aligned_cols=41 Identities=7% Similarity=-0.037 Sum_probs=30.1
Q ss_pred CCceEEEEEcCCCCCChHHHH-HHHHHHHh-CCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTV-DMAKLFTT-RGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l-~La~~L~~-rGh~Vt~~~~~~ 45 (487)
+.|+||+++-....|+..-+. .+++.|.+ .|++|.++.-..
T Consensus 2 ~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 357889888766778776544 46777777 899998886654
No 299
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=29.64 E-value=67 Score=28.80 Aligned_cols=39 Identities=8% Similarity=-0.032 Sum_probs=28.3
Q ss_pred ceEEEEEcCCCC-CChH---HHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAH-GHMI---PTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
++||+++..+.. -|-. ....++++|.++||+|.++....
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 367888875532 3333 44689999999999999988753
No 300
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=29.64 E-value=53 Score=28.93 Aligned_cols=41 Identities=12% Similarity=-0.015 Sum_probs=32.0
Q ss_pred ceEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCc
Q 046605 7 QLHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNA 47 (487)
Q Consensus 7 ~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 47 (487)
+++++.+. -|+-|=..-...||..|+++|++|.++=.+...
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 44554443 557899999999999999999999998766544
No 301
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=29.60 E-value=97 Score=26.73 Aligned_cols=47 Identities=23% Similarity=0.131 Sum_probs=33.8
Q ss_pred hhhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEE
Q 046605 273 EQECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWV 321 (487)
Q Consensus 273 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 321 (487)
.+.+.+|+.. ...+++|..|+........+..+.++|+++|+.++..
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v 67 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGI 67 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEET
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Confidence 4567788864 3459999998754444566788889999999875543
No 302
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=29.47 E-value=37 Score=33.65 Aligned_cols=35 Identities=11% Similarity=0.234 Sum_probs=27.4
Q ss_pred HHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEe
Q 046605 110 PLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFH 147 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~ 147 (487)
++.+++++.+||+||.+. ....+|+++|||++.+.
T Consensus 363 el~~~i~~~~pDl~ig~~---~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGTQ---MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred HHHHHHHhcCCCEEEecc---chHHHHHhcCCCeEecc
Confidence 456666677899999874 46778899999999873
No 303
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=29.36 E-value=99 Score=25.44 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=30.5
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
++++||+|+.++... ..-+......|.++|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 566899999876554 3456667788888999999998753
No 304
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=29.36 E-value=2.9e+02 Score=24.11 Aligned_cols=36 Identities=11% Similarity=0.232 Sum_probs=27.1
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc---chHHHHHHhCCCeEEE
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP---WATDAAAKFGIPRLVF 146 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~---~~~~~A~~~giP~v~~ 146 (487)
..+.+.+++. .++..|+.+. .+..+|...|+|++.-
T Consensus 118 ~~vm~~l~~~--gL~fvDS~Ts~~S~a~~~A~~~gvp~~~r 156 (245)
T 2nly_A 118 RAILEVVKEK--NAFIIDSGTSPHSLIPQLAEELEVPYATR 156 (245)
T ss_dssp HHHHHHHHHT--TCEEEECCCCSSCSHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHC--CCEEEcCCCCcccHHHHHHHHcCCCeEEe
Confidence 3455555544 5999999764 6788999999999974
No 305
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=29.30 E-value=30 Score=31.74 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=25.6
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
..++||+|+-.|+.| ..+|..|+++||+|+++.
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 356899999887776 567889999999999993
No 306
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=29.28 E-value=37 Score=28.87 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=25.2
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.+++|.|+-.+..| ..+|+.|.++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 46789888765555 56789999999999988643
No 307
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=29.27 E-value=38 Score=25.02 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=24.4
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRG-VKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 44 (487)
.+++|+++- + |-+- ..+++.|.++| |+|+++...
T Consensus 4 ~~~~v~I~G--~-G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVG--A-GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEEC--C-SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEEC--C-CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 356888773 3 4432 46889999999 999887653
No 308
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.03 E-value=34 Score=30.52 Aligned_cols=32 Identities=13% Similarity=-0.002 Sum_probs=24.8
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 468887665555 47889999999999998654
No 309
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=28.91 E-value=1.7e+02 Score=21.89 Aligned_cols=48 Identities=6% Similarity=-0.079 Sum_probs=29.6
Q ss_pred cCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 386 AGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 386 ~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
..+|+|++-...|.......+ +..|+--.+.+ .++.++|..+|++++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~K---------P~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTK---------PWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEES---------SCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccC---------CCCHHHHHHHHHHHHH
Confidence 456777765444433333333 23345445554 4899999999999886
No 310
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=28.90 E-value=82 Score=25.53 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=24.2
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhcC
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEASG 315 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 315 (487)
.+|+++||....+...+...++.+++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999999888888888888888764
No 311
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=28.88 E-value=69 Score=24.37 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=26.6
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh----CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~----giP~v~~~~~ 149 (487)
+..+.++..+||+||.|...+ -+..+.+.+ .+|.|.++..
T Consensus 39 ~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 39 EAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 344555667899999997544 455555544 5788888654
No 312
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=28.84 E-value=2.4e+02 Score=32.53 Aligned_cols=43 Identities=9% Similarity=0.068 Sum_probs=36.2
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHL 50 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 50 (487)
--+++.-.|+.|-..-.+.++...+.+|..|.|++.+...+.+
T Consensus 384 ~lilI~G~pGsGKTtLaLq~a~~~~~~G~~vlyis~E~s~~~~ 426 (1706)
T 3cmw_A 384 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPI 426 (1706)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEccCchHHH
Confidence 3466777889999999999999999999999999998765543
No 313
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=28.82 E-value=25 Score=31.80 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=25.3
Q ss_pred hhcccCccccccccCchhHHHHhhc----CCcEeccCc
Q 046605 362 ILDHEAVGGFVTHCGWNSILEGVTA----GVPLVTWPV 395 (487)
Q Consensus 362 ll~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~ 395 (487)
+-..+++ +|+-||=||+.+++.. ++|+++++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3344565 9999999999999843 789999983
No 314
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=28.82 E-value=34 Score=30.76 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=25.4
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 1 M~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 1 MTTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CCeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 4579999777766 4578899999999998854
No 315
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.79 E-value=32 Score=32.31 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=25.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
++++||.|+-.+..| ..+|+.|.++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456899999765544 5789999999999998854
No 316
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=28.71 E-value=1.4e+02 Score=25.44 Aligned_cols=87 Identities=10% Similarity=0.046 Sum_probs=0.0
Q ss_pred CcEEEEeccCcccCCH-HHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCC----cEeecccc-h
Q 046605 286 NSVVYICFGSVANFTS-AQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKG----LIIRGWAP-Q 359 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~-~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n----v~~~~~vp-~ 359 (487)
++..+|+-| .. .......++....+-++|=+ +|+.+.......| +.+++.++ -
T Consensus 40 ~g~~lV~GG-----g~~GlM~aa~~gA~~~GG~~iGv----------------~p~~l~~~e~~~~~~~~~~~~~~~~~R 98 (216)
T 1ydh_A 40 RKIDLVYGG-----GSVGLMGLISRRVYEGGLHVLGI----------------IPKALMPIEISGETVGDVRVVADMHER 98 (216)
T ss_dssp TTCEEEECC-----CSSHHHHHHHHHHHHTTCCEEEE----------------EEGGGHHHHCCSSCCSEEEEESSHHHH
T ss_pred CCCEEEECC-----CcccHhHHHHHHHHHcCCcEEEE----------------echhcCccccccCCCCcccccCCHHHH
Q ss_pred HhhhcccCccccccccCchhHHHHh---------hcCCcEecc
Q 046605 360 VLILDHEAVGGFVTHCGWNSILEGV---------TAGVPLVTW 393 (487)
Q Consensus 360 ~~ll~~~~~~~~I~HGG~gs~~eal---------~~GvP~l~~ 393 (487)
+.++..-+-..++--||.||.-|.. .+++|++.+
T Consensus 99 k~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 99 KAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp HHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred HHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 317
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=28.68 E-value=2.1e+02 Score=27.34 Aligned_cols=32 Identities=9% Similarity=0.071 Sum_probs=23.0
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~ 43 (487)
++||+++..+. ...++++.|+++ |++++++.+
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~ 56 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAP 56 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEE
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 36899987763 356778888765 888777654
No 318
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=28.65 E-value=62 Score=26.19 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=25.0
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhcC-CcEE
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEASG-QNFI 319 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i 319 (487)
.+|+++||....+...+...++++.+.+ .+++
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 34 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCcee
Confidence 6899999999777778888888888763 3444
No 319
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=28.62 E-value=33 Score=32.17 Aligned_cols=38 Identities=8% Similarity=0.027 Sum_probs=27.5
Q ss_pred CceEEEEEcCCCCC-Ch---HHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHG-HM---IPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~G-H~---~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++||+++..+..+ |- .....++++|.++||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 46889888765333 32 3447889999999999998864
No 320
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.51 E-value=96 Score=23.11 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=23.8
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh------CCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF------GIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~------giP~v~~~~ 148 (487)
+..+.+++.+||+||.|.... .+..+.+.+ ..|.|.+.+
T Consensus 41 ~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~ 87 (132)
T 3lte_A 41 DAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVS 87 (132)
T ss_dssp HHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEe
Confidence 334455667999999998654 355555443 245555544
No 321
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=28.42 E-value=82 Score=23.39 Aligned_cols=40 Identities=5% Similarity=0.113 Sum_probs=25.8
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
+..+.++..+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 42 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 42 QGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 344555667899999998654 455555544 3566666543
No 322
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=28.41 E-value=61 Score=29.56 Aligned_cols=34 Identities=9% Similarity=0.144 Sum_probs=25.6
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC-C-CeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR-G-VKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~ 44 (487)
|++++|+++..+.. .+|++.|.++ | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 45689999866654 4789999886 7 888877654
No 323
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=28.31 E-value=48 Score=28.57 Aligned_cols=40 Identities=10% Similarity=0.065 Sum_probs=32.0
Q ss_pred ceEEEEEc--CCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 046605 7 QLHIFFFP--FLAHGHMIPTVDMAKLFTTR-GVKASVITTPGN 46 (487)
Q Consensus 7 ~~~Il~~~--~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 46 (487)
++|++.+. -|+-|-..-...||..|+++ |++|.++=.+..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45554443 56889999999999999999 999999977654
No 324
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=28.31 E-value=71 Score=29.41 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEecCCC
Q 046605 300 TSAQLMEIAMGLEASGQNFIWVVRKNK 326 (487)
Q Consensus 300 ~~~~~~~~~~a~~~~~~~~i~~~~~~~ 326 (487)
+.+-...+.+++.+-..+.||...+..
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF 89 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 456688899999999999999987665
No 325
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=28.26 E-value=20 Score=31.93 Aligned_cols=28 Identities=21% Similarity=0.427 Sum_probs=23.8
Q ss_pred ccCccccccccCchhHHHHhhc---CCcEeccC
Q 046605 365 HEAVGGFVTHCGWNSILEGVTA---GVPLVTWP 394 (487)
Q Consensus 365 ~~~~~~~I~HGG~gs~~eal~~---GvP~l~~P 394 (487)
.+++ +|+-||=||+++++.. ++|+++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn 71 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFK 71 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEE
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEE
Confidence 3455 9999999999999877 88888887
No 326
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=28.16 E-value=99 Score=26.85 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=23.3
Q ss_pred CCCCEEEeCCCCc-------chHHHHHHhCCCeEEEe
Q 046605 118 HKPDCLVADMFFP-------WATDAAAKFGIPRLVFH 147 (487)
Q Consensus 118 ~~pDlVI~D~~~~-------~~~~~A~~~giP~v~~~ 147 (487)
.+||+|++|..-. .|.-+.-.+|+|.|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 5799999998654 25556777889999884
No 327
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=28.12 E-value=48 Score=29.78 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=24.9
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|++|+|+ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 4566665 4455543 467899999999999887653
No 328
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=28.05 E-value=56 Score=24.93 Aligned_cols=40 Identities=18% Similarity=0.325 Sum_probs=23.2
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHH-------hCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAK-------FGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 149 (487)
+..+.+++.+||+||.|.... .+..+.+. .++|+|.++..
T Consensus 37 ~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 37 EALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 344455566899999997654 23333322 36788877653
No 329
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=27.97 E-value=57 Score=28.95 Aligned_cols=39 Identities=10% Similarity=0.080 Sum_probs=28.5
Q ss_pred CceEEEEEcCCCCCChH--HHHHHHHHHHhCCCeEEEEeCCCCcc
Q 046605 6 CQLHIFFFPFLAHGHMI--PTVDMAKLFTTRGVKASVITTPGNAP 48 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~--p~l~La~~L~~rGh~Vt~~~~~~~~~ 48 (487)
.|.|||++- ||-. -...|.+.|.+.|++|+++.+.....
T Consensus 3 ~m~~vLiV~----g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~ 43 (259)
T 3rht_A 3 AMTRVLYCG----DTSLETAAGYLAGLMTSWQWEFDYIPSHVGLD 43 (259)
T ss_dssp ---CEEEEE----SSCTTTTHHHHHHHHHHTTCCCEEECTTSCBC
T ss_pred CCceEEEEC----CCCchhHHHHHHHHHHhCCceEEEeccccccc
Confidence 577899993 6644 35678889999999999999876643
No 330
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=27.94 E-value=27 Score=32.39 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=25.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCC-eEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGV-KASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 44 (487)
++++||.++-. |++--. ||..|+.+|| +|+++-..
T Consensus 7 ~~~~kI~VIGa---G~vG~~--lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 7 QRRKKVAMIGS---GMIGGT--MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp SCCCEEEEECC---SHHHHH--HHHHHHHHTCCEEEEECSS
T ss_pred CCCCEEEEECC---CHHHHH--HHHHHHhCCCCeEEEEECC
Confidence 45679998865 444333 8889999999 98777554
No 331
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=27.94 E-value=1.1e+02 Score=22.59 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=26.5
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
+..+.++..+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 40 ~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 40 DALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 344556667899999998655 455555543 4677777654
No 332
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.88 E-value=21 Score=30.58 Aligned_cols=32 Identities=9% Similarity=0.115 Sum_probs=23.9
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|||+++-.+ .+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G---~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGE---TT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCH---HH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCC---HH--HHHHHHHHHhCCCeEEEEECC
Confidence 467777543 22 457899999999999999864
No 333
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=27.79 E-value=87 Score=23.41 Aligned_cols=38 Identities=5% Similarity=-0.095 Sum_probs=26.3
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
.+++||++++..+.|--.-.-.+-++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 57889999988776544444455555566799988854
No 334
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.78 E-value=85 Score=26.36 Aligned_cols=36 Identities=17% Similarity=0.081 Sum_probs=29.6
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
..++++..+..|+-.-+..+++.|.++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456777777778888899999999999998877765
No 335
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=27.76 E-value=1.2e+02 Score=27.13 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=31.1
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEe
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFH 147 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~ 147 (487)
.+.+.+++.+..+|+++..+. .+..+|+..|++.+.+.
T Consensus 217 ~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 217 EIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp HHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred HHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 567778888999999998766 46778999999988663
No 336
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.71 E-value=68 Score=29.11 Aligned_cols=82 Identities=11% Similarity=0.101 Sum_probs=48.9
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcc
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDH 365 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~ 365 (487)
+-.|+++--|-.....+....+...|+..+..+.+....... . . ..+. .+ +...
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~-----~----a-~~~~--------------~~--~~~~ 63 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQG-----D----A-TKYC--------------QE--FASK 63 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTT-----H----H-HHHH--------------HH--HTTT
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcc-----h----H-HHHH--------------HH--hhcC
Confidence 334666654433322355667777888888777666543321 0 0 0110 00 1123
Q ss_pred cCccccccccCchhHHHHhh------cCCcEeccCc
Q 046605 366 EAVGGFVTHCGWNSILEGVT------AGVPLVTWPV 395 (487)
Q Consensus 366 ~~~~~~I~HGG~gs~~eal~------~GvP~l~~P~ 395 (487)
.++ +|.-||-||+.|++. .++|+.++|.
T Consensus 64 ~d~--vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 64 VDL--IIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp CSE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCE--EEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 344 999999999999864 5789999996
No 337
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=27.69 E-value=1.2e+02 Score=22.53 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=0.0
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEec
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHG 148 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~ 148 (487)
..+..+.+..+||+||.|...+ -+..+++.+ .+|.+.++.
T Consensus 41 ~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (129)
T 3h1g_A 41 EAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITA 89 (129)
T ss_dssp HHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEES
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeC
No 338
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.69 E-value=85 Score=23.69 Aligned_cols=41 Identities=22% Similarity=0.351 Sum_probs=26.2
Q ss_pred HHHHHhhCCCCEEEeCCCCc-------chHHHHHHh-----CCCeEEEechhH
Q 046605 111 LEQLLQEHKPDCLVADMFFP-------WATDAAAKF-----GIPRLVFHGTSF 151 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~-------~~~~~A~~~-----giP~v~~~~~~~ 151 (487)
..+.++..+||+||.|.... .+..+.+.+ ++|+|.++....
T Consensus 39 a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 39 LSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 34455567899999997543 344444332 689998876543
No 339
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=27.64 E-value=39 Score=29.65 Aligned_cols=40 Identities=8% Similarity=0.151 Sum_probs=31.0
Q ss_pred ceEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 7 QLHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 7 ~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
+++++.+. -|+-|-..-...||..|+++|++|.++=.+..
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 44554443 45778889999999999999999999966543
No 340
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=27.56 E-value=55 Score=32.05 Aligned_cols=36 Identities=17% Similarity=-0.020 Sum_probs=30.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR-GV-KASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~ 45 (487)
+++|||.|+-.|..| +.+|..|+++ || +|+++-...
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 567899999888877 5789999999 99 999986543
No 341
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=27.55 E-value=1.6e+02 Score=27.38 Aligned_cols=40 Identities=10% Similarity=0.077 Sum_probs=33.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAP 48 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 48 (487)
-+++.-.|+.|-..-.+.++..++.+|..|.|+..+...+
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~s~~ 104 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALD 104 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 3566678899999999999999999999999999875443
No 342
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=27.46 E-value=35 Score=32.94 Aligned_cols=26 Identities=4% Similarity=-0.054 Sum_probs=19.8
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGV 36 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh 36 (487)
.|||||++-.++. -.+||+.|.+.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 4789999977753 4478999988865
No 343
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=27.31 E-value=48 Score=26.70 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
..+++++..|+ | +.|++.+++.|.++|.+|+++ ...
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 35677777665 2 899999999999999999998 543
No 344
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=27.24 E-value=1.4e+02 Score=25.56 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=54.2
Q ss_pred hhHhhhhcCCCCCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEe
Q 046605 274 QECLKWLNSKQPNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLII 353 (487)
Q Consensus 274 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~ 353 (487)
.++-.+|..++ ..+||-|.. ........++....+-++|=+++..... .+ ++.. ......+
T Consensus 35 ~~lg~~LA~~G---~~vVsGGg~----~GiM~aa~~gAl~~GG~tiGVlP~~~~~---~e----~~~~-----~~~~~~~ 95 (215)
T 2a33_A 35 VDLGNELVSRN---IDLVYGGGS----IGLMGLVSQAVHDGGRHVIGIIPKTLMP---RE----LTGE-----TVGEVRA 95 (215)
T ss_dssp HHHHHHHHHTT---CEEEECCCS----SHHHHHHHHHHHHTTCCEEEEEESSCC--------------------CCEEEE
T ss_pred HHHHHHHHHCC---CEEEECCCh----hhHhHHHHHHHHHcCCcEEEEcchHhcc---hh----hccC-----CCCceee
Confidence 45556665442 555655432 1344555555555666666666544321 00 1100 0112345
Q ss_pred ecccch-HhhhcccCccccccccCchhHHHHhh---------cCCcEeccCc
Q 046605 354 RGWAPQ-VLILDHEAVGGFVTHCGWNSILEGVT---------AGVPLVTWPV 395 (487)
Q Consensus 354 ~~~vp~-~~ll~~~~~~~~I~HGG~gs~~eal~---------~GvP~l~~P~ 395 (487)
...++. +.++..-+-..++--||.||.-|... +++|++.+-.
T Consensus 96 ~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 96 VADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred cCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 566664 33433323335777899999988763 4899998864
No 345
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=27.21 E-value=1.2e+02 Score=22.54 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=25.2
Q ss_pred HHHHHHhhC-CCCEEEeCCCCc---chHHHHHHh-----CCCeEEEech
Q 046605 110 PLEQLLQEH-KPDCLVADMFFP---WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~-~pDlVI~D~~~~---~~~~~A~~~-----giP~v~~~~~ 149 (487)
+..+.+++. +||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 40 ~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 40 KAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 334455555 899999997543 344444433 5888888653
No 346
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.20 E-value=59 Score=28.60 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=31.3
Q ss_pred CceEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 6 CQLHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 6 ~~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
++++++.+. -|+-|=..-...||..|+ +|++|.++=.+..
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 456666554 557899999999999999 9999999966544
No 347
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=27.18 E-value=62 Score=25.46 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=27.6
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVI 41 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 41 (487)
..+++++..|+ =+.|++.+++.|.++|.+|+++
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE
Confidence 35777777665 4899999999999999999998
No 348
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.17 E-value=1e+02 Score=23.43 Aligned_cols=42 Identities=14% Similarity=0.272 Sum_probs=0.0
Q ss_pred HHHHHHHh--hCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 109 KPLEQLLQ--EHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 109 ~~l~~~l~--~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
.+..+.++ ..+||+||.|.... .+..+.+.+ ++|+|.++...
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
No 349
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=27.00 E-value=58 Score=29.09 Aligned_cols=43 Identities=9% Similarity=-0.023 Sum_probs=24.1
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|.+-...++||++..--.-=..-+-.....++++|++|++++-
T Consensus 1 ~~~~~~~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~ 43 (273)
T 3dff_A 1 MPHDPGATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTV 43 (273)
T ss_dssp -------CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCCCCCCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 4443446777777543333344555666677789999998873
No 350
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.00 E-value=85 Score=23.85 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=23.8
Q ss_pred HHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 113 QLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 113 ~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
+.++..+||+||.|.... .+..+.+.+ .+|+|.++..
T Consensus 42 ~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 42 QFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 334455899999998654 455555443 4677777654
No 351
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=26.99 E-value=59 Score=29.80 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=24.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+++++|+|+ |+.|-+ -..|++.|.++||+|+.+...
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 456777766 444443 357889999999999998753
No 352
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.98 E-value=62 Score=26.40 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=27.6
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
+..+.++..+||+||.|...+ -|..+++.+ ++|+|.++...
T Consensus 42 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 42 EALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 344556778999999998654 355555443 58888887653
No 353
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=26.90 E-value=91 Score=23.43 Aligned_cols=39 Identities=10% Similarity=0.144 Sum_probs=24.9
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+...++.+|+++- .+-.-...|.+.|.+.|++|..+.+
T Consensus 1 Ms~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (136)
T 3hdv_A 1 MSLVAARPLVLVVD----DNAVNREALILYLKSRGIDAVGADG 39 (136)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCC
Confidence 66666788999885 3555566778888888999887654
No 354
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=26.76 E-value=31 Score=26.69 Aligned_cols=34 Identities=9% Similarity=0.071 Sum_probs=24.2
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++.||+++-. |.+- ..+++.|.++|++|+++...
T Consensus 5 ~~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4557888754 4333 46789999999999988653
No 355
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=26.58 E-value=24 Score=34.59 Aligned_cols=32 Identities=9% Similarity=0.051 Sum_probs=24.4
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+||+|+-.|-.| |.-|..|+++||+|+++=.
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 5678888665433 6668889999999999854
No 356
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=26.34 E-value=41 Score=30.16 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=23.8
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
+||||+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 357899997666664 56888999999998664
No 357
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=26.34 E-value=29 Score=31.79 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=25.6
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCC-eEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGV-KASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~ 43 (487)
+.++||.|+-.|..| ..+|+.|+++|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 456899999776555 578999999999 8888765
No 358
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=26.21 E-value=1.3e+02 Score=22.71 Aligned_cols=28 Identities=21% Similarity=0.295 Sum_probs=18.2
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHH
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAK 138 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~ 138 (487)
..+.++..+||+||.|.... .+..+.+.
T Consensus 46 al~~l~~~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 46 ALQAYQNRQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp HHHHHHHSCCSEEEECTTCCSSCHHHHHHH
T ss_pred HHHHHhcCCCCEEEEeCCCCCCcHHHHHHH
Confidence 34445567899999998654 35554443
No 359
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=26.21 E-value=47 Score=29.33 Aligned_cols=43 Identities=9% Similarity=0.093 Sum_probs=33.5
Q ss_pred CceEEEEEcCC---CCCChHHHHHHHHHHHhCCCeEEEEeCCCCcc
Q 046605 6 CQLHIFFFPFL---AHGHMIPTVDMAKLFTTRGVKASVITTPGNAP 48 (487)
Q Consensus 6 ~~~~Il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 48 (487)
.+||.+|++.+ +.|-=.-...|+..|..||++||.+=-+++.+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlN 66 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCcee
Confidence 45788888865 45666788899999999999999886655543
No 360
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=26.00 E-value=74 Score=25.75 Aligned_cols=28 Identities=25% Similarity=0.192 Sum_probs=22.3
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhcC
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEASG 315 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 315 (487)
+.|+++||....+.+.+...++.+++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999998766777888888887753
No 361
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=25.89 E-value=97 Score=22.19 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=24.7
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHH-------hCCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAK-------FGIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... .+..+.+. .++|+|.++..
T Consensus 36 ~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 36 TALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 344455556899999997544 34433333 35788887653
No 362
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=25.87 E-value=45 Score=29.87 Aligned_cols=32 Identities=6% Similarity=0.046 Sum_probs=24.6
Q ss_pred ceEEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 7 QLHIFFFPF-LAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+||+|+-. |..| ..+|+.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 368999866 6555 4678899999999997654
No 363
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=25.81 E-value=1.2e+02 Score=22.96 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=20.8
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF 139 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~ 139 (487)
+..+.++..+||+||.|.... .+..+++.+
T Consensus 46 ~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 46 DVLKFLQHNKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHHCCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 444556667899999998654 456666655
No 364
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=25.77 E-value=77 Score=26.79 Aligned_cols=33 Identities=9% Similarity=0.125 Sum_probs=27.9
Q ss_pred EEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEE
Q 046605 9 HIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVI 41 (487)
Q Consensus 9 ~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~ 41 (487)
.|+|++ -++-|-..-...||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 355555 468899999999999999999999985
No 365
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=25.73 E-value=91 Score=23.55 Aligned_cols=39 Identities=10% Similarity=-0.045 Sum_probs=27.2
Q ss_pred HHHHHHHhh-CCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEe
Q 046605 109 KPLEQLLQE-HKPDCLVADMFFP--WATDAAAKF-----GIPRLVFH 147 (487)
Q Consensus 109 ~~l~~~l~~-~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~ 147 (487)
.+..+.++. .+||+||.|.... .+..+.+.+ ++|+|.++
T Consensus 49 ~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 49 SAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 445566677 7899999998654 455565554 47777775
No 366
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=25.73 E-value=78 Score=25.69 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=24.7
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhcC-CcEE
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEASG-QNFI 319 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i 319 (487)
.+|+++||....+...+...++++.+.+ .+++
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~~~~v~ 38 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYDGISVS 38 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCceE
Confidence 7999999999767777888888888753 3443
No 367
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=25.58 E-value=38 Score=31.25 Aligned_cols=33 Identities=12% Similarity=0.252 Sum_probs=26.9
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.+||.|+-.|..| ..+|..|.++||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4789998777666 57899999999999998653
No 368
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.51 E-value=1.1e+02 Score=26.38 Aligned_cols=72 Identities=14% Similarity=0.178 Sum_probs=0.0
Q ss_pred HhhhcccCccccccccCchhHHHHhhcCCcEeccCc-----------------------cccchhhHHHHHHHhhceEee
Q 046605 360 VLILDHEAVGGFVTHCGWNSILEGVTAGVPLVTWPV-----------------------YAEQFYNEKIVNEVLKIGIGV 416 (487)
Q Consensus 360 ~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~-----------------------~~DQ~~~a~rv~~~~G~G~~l 416 (487)
...+....+..+|+.||.......- ..+|+|-++. +.+....+..+.+-+|+-+..
T Consensus 56 ~~~~~~~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~ 134 (225)
T 2pju_A 56 RKKLANERCDAIIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQ 134 (225)
T ss_dssp HHHTTTSCCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEE
T ss_pred HHHHhcCCCeEEEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEE
Q ss_pred cccccccccCCccCHHHHHHHHHHH
Q 046605 417 GIQKWCRIVGDFVKREAIVKAVNEI 441 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~~i~~l 441 (487)
..- .+.+++...|+++
T Consensus 135 ~~~---------~~~ee~~~~i~~l 150 (225)
T 2pju_A 135 RSY---------ITEEDARGQINEL 150 (225)
T ss_dssp EEE---------SSHHHHHHHHHHH
T ss_pred EEe---------CCHHHHHHHHHHH
No 369
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=25.50 E-value=49 Score=31.36 Aligned_cols=41 Identities=2% Similarity=-0.030 Sum_probs=29.8
Q ss_pred CCCceEEEEEcCCCCCChH----HHHHHHHHHHhCCCeEEEEeCC
Q 046605 4 GICQLHIFFFPFLAHGHMI----PTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~----p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+|+++||+++..|..+--. .-..++++|.+.||+|+.+-..
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 4778999999877444433 3458899999999999988754
No 370
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.43 E-value=53 Score=30.46 Aligned_cols=31 Identities=26% Similarity=0.289 Sum_probs=21.3
Q ss_pred hCCCCEEEeCCCCc-chHHHHHHhCCCeEEEe
Q 046605 117 EHKPDCLVADMFFP-WATDAAAKFGIPRLVFH 147 (487)
Q Consensus 117 ~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~ 147 (487)
+.+||+||...... ....+.+.+|+|++.+.
T Consensus 94 al~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 94 TLQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred cCCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 35999999875422 22334577899999874
No 371
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=25.41 E-value=28 Score=31.67 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=26.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhC-----C-CeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTR-----G-VKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~ 43 (487)
.+|||+|+-.|..|. .+|..|.++ | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 457999997776663 568888888 9 99999865
No 372
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=25.39 E-value=77 Score=25.70 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=23.1
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhcC
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEASG 315 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 315 (487)
.+|+++||....+.+.+...++.+++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999999777778888888888763
No 373
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=25.31 E-value=19 Score=35.20 Aligned_cols=34 Identities=9% Similarity=0.119 Sum_probs=28.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
..|||+++-.|-.| ..||+.|.++||+|+++=..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 46899999877655 46999999999999999664
No 374
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=25.08 E-value=1.1e+02 Score=26.62 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=24.1
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|..+++..+ ++++.++ |- --..+++.|+++||+|+++.-
T Consensus 1 M~~m~~~k~-vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHMVNGKV-ALVTGAA-QG--IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCCCTTCE-EEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCCE-EEEECCC-Cc--HHHHHHHHHHHCCCEEEEEEC
Confidence 554444344 4444333 32 246789999999999998764
No 375
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=25.01 E-value=1.4e+02 Score=24.95 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=27.6
Q ss_pred HHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechhH
Q 046605 111 LEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTSF 151 (487)
Q Consensus 111 l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 151 (487)
..+.++..+||+||.|...+ .+..+.+.+ ++|+|.++....
T Consensus 38 a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 38 GMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 34455667899999998655 355554433 689888876543
No 376
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=24.85 E-value=64 Score=29.39 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=24.1
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.++|+|+ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 3 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 4566665 4445443 57899999999999988754
No 377
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=24.84 E-value=2.9e+02 Score=24.65 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=33.3
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHhCCCeEEEech
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKFGIPRLVFHGT 149 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~~~ 149 (487)
..+.+.+++.+..+|+++..+. .+-.+|+..|++.+.+.+.
T Consensus 227 ~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 227 KQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp HHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 3677788889999999998766 5677899999999877554
No 378
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=24.81 E-value=71 Score=29.12 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=25.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
++|+|+|+ |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 12 ~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 34677766 444544 357789999999999998764
No 379
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=24.69 E-value=87 Score=29.15 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=24.7
Q ss_pred cEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCC
Q 046605 287 SVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKN 325 (487)
Q Consensus 287 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 325 (487)
.+|+.+-||-....+ ...++++|.+.|++|+|.....
T Consensus 4 ~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp EEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSS
T ss_pred cEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCc
Confidence 366666666543222 3457788888999999987654
No 380
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=24.65 E-value=58 Score=27.32 Aligned_cols=36 Identities=3% Similarity=-0.103 Sum_probs=21.6
Q ss_pred ceEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 7 QLHIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 7 ~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
||||+++. .|-.+.-.-...+++.+.+.|++|+++-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 46787775 3333221334556777777788887764
No 381
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=24.64 E-value=72 Score=28.42 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=25.0
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|.+....++||++..--.-=..-+-.....+.++|++|++++-
T Consensus 1 ~~~~~~~~rvLvv~aHPDDe~l~~GGtia~~~~~G~~V~vv~~ 43 (270)
T 3dfi_A 1 MLQDADRTRILAISPHLDDAVLSVGASLAQAEQDGGKVTVFTV 43 (270)
T ss_dssp -----CCSEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCCCEEEEEeCCchHHHhhHHHHHHHHhCCCeEEEEEE
Confidence 4444445677776543333345555666677789999998863
No 382
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=24.60 E-value=72 Score=32.05 Aligned_cols=41 Identities=5% Similarity=-0.096 Sum_probs=36.6
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
++.+|++.+.++-.|-....-++..|..+|++|..+...--
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP 137 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVP 137 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBC
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 46799999999999999999999999999999998876533
No 383
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.45 E-value=1.3e+02 Score=22.36 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=22.6
Q ss_pred CCCCEEEeCCCCc--chHHHHHH-------hCCCeEEEechh
Q 046605 118 HKPDCLVADMFFP--WATDAAAK-------FGIPRLVFHGTS 150 (487)
Q Consensus 118 ~~pDlVI~D~~~~--~~~~~A~~-------~giP~v~~~~~~ 150 (487)
..||+||.|.... .+..+.+. .++|+|.++...
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCC
Confidence 7899999998654 34444443 357888886643
No 384
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=24.23 E-value=25 Score=32.04 Aligned_cols=36 Identities=14% Similarity=-0.084 Sum_probs=28.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+++.+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 5 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 5 TKVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred CccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 345788888777555 678889999999999997653
No 385
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=24.15 E-value=1e+02 Score=26.51 Aligned_cols=40 Identities=15% Similarity=-0.022 Sum_probs=23.3
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+...+. |.++++.++ |- --..+++.|+++|++|+++...
T Consensus 1 M~~~~~~-k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAASGEA-RRVLVYGGR-GA--LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -----CC-CEEEEETTT-SH--HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCccCCC-CEEEEECCC-cH--HHHHHHHHHHhCCCEEEEEeCC
Confidence 4433333 344454433 32 3468899999999999988654
No 386
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=24.12 E-value=78 Score=29.37 Aligned_cols=34 Identities=12% Similarity=-0.195 Sum_probs=25.8
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|++|+++..+ .....++++|.+.||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4578888643 446788999999999999887643
No 387
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=24.11 E-value=92 Score=28.79 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccCccccccccCchh
Q 046605 300 TSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNS 379 (487)
Q Consensus 300 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HGG~gs 379 (487)
+.+-...+.+++.+-..+.||.+.+.... .++.++++...+-.+|+. ||=+.-...
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------------~rlL~~lD~~~i~~~PK~--~~GySDiTa 119 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNS----------------------NSLLPYIDYDAFQNNPKI--MIGYSDATA 119 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----------------------GGGGGGSCHHHHHHSCCE--EEECGGGHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH----------------------HHHhhhcChhHHhhCCeE--EEEechHHH
Confidence 45668888999998889999998876521 344455555555555655 666666666
Q ss_pred HHHHhh--cCCcEeccCc
Q 046605 380 ILEGVT--AGVPLVTWPV 395 (487)
Q Consensus 380 ~~eal~--~GvP~l~~P~ 395 (487)
++-+++ .|++.+.=|.
T Consensus 120 L~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 120 LLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHHHHCCCEEECCC
T ss_pred HHHHHHHhcCceEEECCh
Confidence 666666 4666666664
No 388
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=24.11 E-value=1.3e+02 Score=24.61 Aligned_cols=39 Identities=8% Similarity=0.027 Sum_probs=31.8
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+..|.|+...+.|-..=+..|++.|.++|.+|..+....
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 344556666688999999999999999999999888654
No 389
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=23.96 E-value=45 Score=30.35 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=23.2
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|++|+|+ |+.|-+ -..|++.|.++||+|+.+...
T Consensus 1 M~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 1 MNSILIC--GGAGYI--GSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp -CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEE--CCCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 3566665 333433 367899999999999988653
No 390
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=23.94 E-value=1.6e+02 Score=28.12 Aligned_cols=32 Identities=9% Similarity=0.018 Sum_probs=23.8
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.||+++..+ ...+.+++++.+.|++|+++.+.
T Consensus 3 k~ilI~g~g-----~~~~~~~~a~~~~G~~vv~v~~~ 34 (451)
T 1ulz_A 3 NKVLVANRG-----EIAVRIIRACKELGIPTVAIYNE 34 (451)
T ss_dssp SSEEECCCH-----HHHHHHHHHHHHHTCCEEEEECG
T ss_pred ceEEEECCc-----HHHHHHHHHHHHcCCeEEEEech
Confidence 468877532 23568999999999999988763
No 391
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=23.93 E-value=70 Score=32.23 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=38.0
Q ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccchhhh
Q 046605 5 ICQLHIFFFP-FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHLSRS 53 (487)
Q Consensus 5 ~~~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 53 (487)
.++.+|+|++ -|+-|-..-..+||..|+++|++|.++..+.. ..+...
T Consensus 5 ~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~-~~l~~~ 53 (589)
T 1ihu_A 5 QNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA-SNVGQV 53 (589)
T ss_dssp SSCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT-CCHHHH
T ss_pred CCCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCCC-cCHHHH
Confidence 4566777775 56889999999999999999999999998863 444333
No 392
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=23.73 E-value=1.6e+02 Score=21.97 Aligned_cols=32 Identities=9% Similarity=0.102 Sum_probs=21.7
Q ss_pred CCCCEEEeCCCCc--chHHHHHHh------CCCeEEEech
Q 046605 118 HKPDCLVADMFFP--WATDAAAKF------GIPRLVFHGT 149 (487)
Q Consensus 118 ~~pDlVI~D~~~~--~~~~~A~~~------giP~v~~~~~ 149 (487)
.+||+||.|...+ -|..+++.+ .+|+|.++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 6899999998655 355444432 4688877654
No 393
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=23.61 E-value=64 Score=29.60 Aligned_cols=36 Identities=3% Similarity=-0.104 Sum_probs=26.2
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
++++|+|+ |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 45677765 4455443 578999999999999987643
No 394
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=23.51 E-value=76 Score=29.26 Aligned_cols=81 Identities=14% Similarity=0.067 Sum_probs=0.0
Q ss_pred EEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhcccC
Q 046605 288 VVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILDHEA 367 (487)
Q Consensus 288 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~~~~ 367 (487)
.|+++-.|-.....+....+...|+..+..+.+........ ..-+.........+
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~-------------------------a~~~~~~~~~~~~d 82 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGD-------------------------ATLEAERAMHENYD 82 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTH-------------------------HHHHHHHHTTTTCS
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcch-------------------------HHHHHHHHhhcCCC
Q ss_pred ccccccccCchhHHHHh------hcCCcEeccCc
Q 046605 368 VGGFVTHCGWNSILEGV------TAGVPLVTWPV 395 (487)
Q Consensus 368 ~~~~I~HGG~gs~~eal------~~GvP~l~~P~ 395 (487)
+ +|.-||=||+.|++ -.++|+.++|.
T Consensus 83 ~--vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 83 V--LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp E--EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred E--EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
No 395
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.39 E-value=1.1e+02 Score=23.67 Aligned_cols=39 Identities=8% Similarity=0.117 Sum_probs=25.5
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|.+..++++|+++- .+-.-...|.+.|.+.|++|..+.+
T Consensus 1 M~~~~~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 3gt7_A 1 MSLSNRAGEILIVE----DSPTQAEHLKHILEETGYQTEHVRN 39 (154)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESS
T ss_pred CCcccCCCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 55556778999984 3555667788888888999977654
No 396
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=23.31 E-value=1.1e+02 Score=25.59 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=28.3
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
..++++..+..|...-+..+++.|.++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 446666667777777889999999999998877654
No 397
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.29 E-value=62 Score=30.05 Aligned_cols=36 Identities=6% Similarity=0.045 Sum_probs=25.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 44 (487)
+++++|+|+ |+.|-+- ..|+++|.++ ||+|+.+.-.
T Consensus 22 m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 556787775 4445443 5788999998 9999999864
No 398
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=23.28 E-value=2.1e+02 Score=21.82 Aligned_cols=48 Identities=6% Similarity=-0.178 Sum_probs=30.9
Q ss_pred hcCCcEeccCccccchhhHHHHHHHhh-ceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 385 TAGVPLVTWPVYAEQFYNEKIVNEVLK-IGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 385 ~~GvP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
...+|+|++--..|... ..+.. ..| +--.+.+ .++.++|.++|++++.
T Consensus 74 ~~~~~ii~~s~~~~~~~-~~~~~-~~g~~~~~l~K---------P~~~~~L~~~i~~~l~ 122 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTT-AMEAV-NEGQVFRFLNK---------PCQMSDIKAAINAGIK 122 (151)
T ss_dssp CSSCEEEEEECGGGHHH-HHHHH-HHTCCSEEEES---------SCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHH-HHHHH-HcCCeeEEEcC---------CCCHHHHHHHHHHHHH
Confidence 34677777654444433 33332 556 5345554 5899999999999997
No 399
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=23.23 E-value=1.5e+02 Score=22.38 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=23.8
Q ss_pred HHHHhh-CCCCEEEeCCCCc---chHHHHHH----hCCCeEEEec
Q 046605 112 EQLLQE-HKPDCLVADMFFP---WATDAAAK----FGIPRLVFHG 148 (487)
Q Consensus 112 ~~~l~~-~~pDlVI~D~~~~---~~~~~A~~----~giP~v~~~~ 148 (487)
.+.+++ ..||+||.|...+ .+..+.+. -++|+|.++.
T Consensus 42 ~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 42 VEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp HHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred HHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 334444 7899999998653 34444443 3688888754
No 400
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=23.22 E-value=3.2e+02 Score=30.14 Aligned_cols=34 Identities=3% Similarity=-0.082 Sum_probs=24.7
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+.|||++.-+ .-.+.+++++.+.|++|+.+.+..
T Consensus 4 ~kkVLIagrG-----eia~riiraa~elGi~vVav~s~~ 37 (1150)
T 3hbl_A 4 IKKLLVANRG-----EIAIRIFRAAAELDISTVAIYSNE 37 (1150)
T ss_dssp CCEEEECCCH-----HHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4567775432 245689999999999998887643
No 401
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=23.13 E-value=96 Score=23.76 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=25.5
Q ss_pred CcEEEEeccCcccCCHHHHHHHHHHHHhc-C-CcEEEEecC
Q 046605 286 NSVVYICFGSVANFTSAQLMEIAMGLEAS-G-QNFIWVVRK 324 (487)
Q Consensus 286 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~-~~~i~~~~~ 324 (487)
..+|+++.||........+..+.+.+++. + ..|-+.+-.
T Consensus 4 ~alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le 44 (133)
T 2xws_A 4 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAA 44 (133)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESS
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeee
Confidence 35899999996433345577777777653 3 466666444
No 402
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=23.08 E-value=58 Score=30.47 Aligned_cols=39 Identities=3% Similarity=-0.044 Sum_probs=29.2
Q ss_pred CceEEEEEcCCCCCCh----HHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHM----IPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+++||+++..|..+-- ..-..++++|.+.||+|+.+-..
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 5789999987744443 33458899999999999988753
No 403
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=23.05 E-value=1.3e+02 Score=25.35 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=24.7
Q ss_pred HHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEec
Q 046605 112 EQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHG 148 (487)
Q Consensus 112 ~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~ 148 (487)
.+.++..+||+||.|...+ .+..+++.+ ++|+|.++.
T Consensus 44 ~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 44 LRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp HHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 3445567899999998655 355554443 688887754
No 404
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=22.91 E-value=3e+02 Score=22.68 Aligned_cols=55 Identities=9% Similarity=-0.028 Sum_probs=42.1
Q ss_pred chhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 046605 399 QFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAK 462 (487)
Q Consensus 399 Q~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 462 (487)
+..|+..- ++.|.-..+-.+ ..+.++|.+++++=|.++...+.+..+..+.+..+
T Consensus 117 ~~LN~~Ye-~kFGfpFVi~v~--------G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 117 AEWNVLYK-KKFGFIFIICAS--------GRTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHHH-HHHSSCCCCCCS--------SCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHcCCeEEEEeC--------CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 35677777 588887777766 67889999999998886666677777777776665
No 405
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=22.91 E-value=61 Score=29.27 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=23.7
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++|+|+ |+.|.+- ..|++.|.++||+|+.+..
T Consensus 3 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 5677665 4555553 4678999999999888654
No 406
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=22.90 E-value=1e+02 Score=28.74 Aligned_cols=34 Identities=12% Similarity=-0.183 Sum_probs=25.9
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|+||+++..+ .....++++|.+.|++|.++.+..
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578888754 245678889999999999888743
No 407
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=22.84 E-value=1.2e+02 Score=26.20 Aligned_cols=42 Identities=19% Similarity=0.305 Sum_probs=28.6
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHh----CCCeEEEechh
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKF----GIPRLVFHGTS 150 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~----giP~v~~~~~~ 150 (487)
.+..+.++..+||+||.|...+ -+..+++.+ ++|+|.++...
T Consensus 71 ~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 71 MNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 3445566678999999998766 345555443 58888886643
No 408
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.82 E-value=47 Score=33.09 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=29.1
Q ss_pred HHHHHHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEE
Q 046605 109 KPLEQLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVF 146 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 146 (487)
.++.+++++.+||++|... ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKLKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhcCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 4677888888999999874 4677899999999865
No 409
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.75 E-value=2.4e+02 Score=24.30 Aligned_cols=33 Identities=12% Similarity=-0.033 Sum_probs=23.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+++++.++.| --.++|+.|+++|++|.++.-.
T Consensus 8 k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 8 ATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45555544432 3468999999999999888653
No 410
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=22.74 E-value=88 Score=26.36 Aligned_cols=35 Identities=6% Similarity=0.050 Sum_probs=23.1
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHH-hCCCeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFT-TRGVKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~ 44 (487)
|||.++++ |+.|-+ -..+++.|. ++||+|+.+.-.
T Consensus 4 mmk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 45633333 333333 368899999 899999988764
No 411
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=22.72 E-value=56 Score=28.87 Aligned_cols=33 Identities=12% Similarity=0.027 Sum_probs=25.2
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 11 FFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 11 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++.+|..|+-.-+..+++.|+++|++|..+--
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl 86 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRL 86 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 344567777777788999999999999876543
No 412
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=22.72 E-value=1.1e+02 Score=27.92 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=23.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+++++.++.| + -..||+.|+++|++|.++.-.
T Consensus 9 k~vlVTGas~g-I--G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 9 RTAFVTGGANG-V--GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp CEEEEETTTST-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEcCCchH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 45566555433 3 468899999999998887654
No 413
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=22.69 E-value=32 Score=30.39 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=23.9
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCe-EEEEe
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVK-ASVIT 42 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~-Vt~~~ 42 (487)
|....++|||.|+-.|..| ..+++.|.++||+ |+++.
T Consensus 4 m~~~~~~m~i~iiG~G~mG-----~~~a~~l~~~g~~~v~~~~ 41 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLA-----TNLAKALYRKGFRIVQVYS 41 (266)
T ss_dssp ---CGGGCCEEEECCSHHH-----HHHHHHHHHHTCCEEEEEC
T ss_pred hhcCCCCCeEEEEcCCHHH-----HHHHHHHHHCCCeEEEEEe
Confidence 3333456899998665444 3568888889999 55554
No 414
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=22.66 E-value=42 Score=33.16 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=28.3
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|.+.+...+|+|+-.+..| +.+|..|+++|++|+++-...
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSSC
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccCC
Confidence 5544555789998777655 677888999999999996543
No 415
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=22.64 E-value=1e+02 Score=23.24 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=25.5
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
+..+.++..+||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 45 ~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 93 (143)
T 3cnb_A 45 DAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGA 93 (143)
T ss_dssp HHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESS
T ss_pred HHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCC
Confidence 344555667899999997654 344444433 4678877654
No 416
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.62 E-value=89 Score=24.19 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=22.7
Q ss_pred HHHHHHHhh-CCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEech
Q 046605 109 KPLEQLLQE-HKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGT 149 (487)
Q Consensus 109 ~~l~~~l~~-~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 149 (487)
.+..+.++. .+||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 39 ~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 87 (154)
T 2qsj_A 39 SDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGE 87 (154)
T ss_dssp HHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC---
T ss_pred HHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCC
Confidence 345556666 7899999997544 334333333 5788877554
No 417
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=22.60 E-value=63 Score=31.50 Aligned_cols=34 Identities=9% Similarity=0.028 Sum_probs=26.1
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTR--GVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~ 43 (487)
+++|||.|+-.|..| ..+|..|+++ ||+|+++..
T Consensus 3 ~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 3 FEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 346899999766665 4678888888 899998854
No 418
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=22.58 E-value=80 Score=28.45 Aligned_cols=36 Identities=11% Similarity=0.054 Sum_probs=23.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
.++++|+|+ |+.|-+ -..|++.|.++||+|+.+...
T Consensus 10 ~~~~~vlVT--GatG~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 10 HGSMRALIT--GVAGFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ---CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cCcceEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 455666655 444544 357899999999999998754
No 419
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=22.53 E-value=82 Score=23.34 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=18.6
Q ss_pred ccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 046605 428 FVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAKR 463 (487)
Q Consensus 428 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 463 (487)
.++++++.+....+- ..+.+++-|++++..
T Consensus 2 ~~~~eq~~k~~~el~------~v~~n~~lL~EML~~ 31 (103)
T 1wrd_A 2 PLGSEQIGKLRSELE------MVSGNVRVMSEMLTE 31 (103)
T ss_dssp CSSSTTHHHHHHHHH------HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH------HHHHHHHHHHHHHHh
Confidence 456666666555432 567777777777664
No 420
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.46 E-value=1.4e+02 Score=27.21 Aligned_cols=74 Identities=11% Similarity=0.147 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhc-ccCccccccccCc
Q 046605 299 FTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILD-HEAVGGFVTHCGW 377 (487)
Q Consensus 299 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~-~~~~~~~I~HGG~ 377 (487)
.+.+....+.+++.+-..+.||...+.... .++.++++...+-. +|+. ||=+.-.
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyga----------------------~rlLp~LD~~~i~~a~PK~--~iGySDi 119 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYGC----------------------GQLLPGLDWGRLQAASPRP--LIGFSDI 119 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSCG----------------------GGGTTTCCHHHHHHSCCCC--EEECGGG
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcCH----------------------HHHhhccchhhhhccCCCE--EEEEchh
Confidence 456668889999999899999998876521 44556666555555 6776 8888888
Q ss_pred hhHHHHhh-cCCcEeccCcc
Q 046605 378 NSILEGVT-AGVPLVTWPVY 396 (487)
Q Consensus 378 gs~~eal~-~GvP~l~~P~~ 396 (487)
..++-+++ .|++.+.=|..
T Consensus 120 TaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 120 SVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHHHcCCcEEECHhh
Confidence 88888887 37777777744
No 421
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.29 E-value=75 Score=28.91 Aligned_cols=37 Identities=5% Similarity=0.157 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEeC
Q 046605 7 QLHIFFFPFLAHGHMIP-TVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+||+++..+..++... ...+.+.|.++|++|.+..+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 56899999888777544 67889999999999887654
No 422
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=22.26 E-value=84 Score=28.61 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=21.7
Q ss_pred hhCCCCEEEeCCCCc-chHHHHHHhCCCeEEEec
Q 046605 116 QEHKPDCLVADMFFP-WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 116 ~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~ 148 (487)
-+.+||+||...... ....--+..|||++.+..
T Consensus 81 ~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 81 LALKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred HccCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 345999999875432 223334567899998843
No 423
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=22.24 E-value=1e+02 Score=25.02 Aligned_cols=38 Identities=11% Similarity=-0.141 Sum_probs=28.6
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc---chHHHHHHhCCCeEEEec
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP---WATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~---~~~~~A~~~giP~v~~~~ 148 (487)
+.+.++++ +||+|++-.... .+..+|.++++|.+.-.+
T Consensus 61 ~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~ 101 (166)
T 3fet_A 61 EGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIF 101 (166)
T ss_dssp HHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEE
Confidence 35556666 899999886433 366789999999998754
No 424
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.20 E-value=45 Score=26.10 Aligned_cols=63 Identities=14% Similarity=0.004 Sum_probs=36.0
Q ss_pred cCCcEeccCccccchhhHHHHHHHhh-ceEeecccccccccCCccCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 046605 386 AGVPLVTWPVYAEQFYNEKIVNEVLK-IGIGVGIQKWCRIVGDFVKREAIVKAVNEIMMGDRAEEMRSRAKAFGEMAK 462 (487)
Q Consensus 386 ~GvP~l~~P~~~DQ~~~a~rv~~~~G-~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 462 (487)
..+|+|++-...+. ....... ..| +--.+.+ .++.++|..+|++++. ...+++..+++.+.++
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~-~~g~~~~~l~k---------P~~~~~L~~~i~~~~~---~~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAV-NRGKISRFLLK---------PWEDEDVFKVVEKGLQ---LAFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHH-HTTCCSEEEES---------SCCHHHHHHHHHHHHH---HHHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCH-HHHHHHH-hccchheeeeC---------CCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 46788877544442 2333332 455 5445544 4899999999999997 4445444444433443
No 425
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=22.12 E-value=1.2e+02 Score=27.72 Aligned_cols=81 Identities=21% Similarity=0.070 Sum_probs=0.0
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILD 364 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~ 364 (487)
.+-.|+++--+-.. +....+.+.|++.+..+.+........ ..-+....+..
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~-------------------------~~~~~~~~~~~ 81 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGD-------------------------AARYVEEARKF 81 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTH-------------------------HHHHHHHHHHH
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcch-------------------------HHHHHHHHHhc
Q ss_pred ccCccccccccCchhHHHHh--------hcCCcEeccCc
Q 046605 365 HEAVGGFVTHCGWNSILEGV--------TAGVPLVTWPV 395 (487)
Q Consensus 365 ~~~~~~~I~HGG~gs~~eal--------~~GvP~l~~P~ 395 (487)
.+++ +|.-||=||+.|++ ..++|+.++|.
T Consensus 82 ~~d~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 82 GVAT--VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp TCSE--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred CCCE--EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 426
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=22.07 E-value=1.7e+02 Score=22.40 Aligned_cols=32 Identities=22% Similarity=0.465 Sum_probs=22.0
Q ss_pred CCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 118 HKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 118 ~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
.+||+||.|...+ -+..+.+.+ ++|+|.++..
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~ 100 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTS 100 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECC
Confidence 5799999998655 355554433 4788888664
No 427
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=22.04 E-value=1.6e+02 Score=22.20 Aligned_cols=32 Identities=16% Similarity=0.419 Sum_probs=22.5
Q ss_pred CCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 118 HKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 118 ~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
..||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 61 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~ 101 (149)
T 1k66_A 61 PRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTS 101 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCC
Confidence 7899999998654 455555543 4788888654
No 428
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=22.02 E-value=1.5e+02 Score=25.61 Aligned_cols=40 Identities=5% Similarity=-0.005 Sum_probs=25.6
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|...++..+|+| +.+ .|-+ -..+++.|.++|++|+++.-.
T Consensus 1 m~~~~~~k~vlI-TGa-sggi--G~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 1 MQNRLRSALALV-TGA-GSGI--GRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCCCCTTCEEEE-ETT-TSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCEEEE-ECC-CChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 554444445444 433 3322 367899999999999988653
No 429
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.02 E-value=73 Score=29.29 Aligned_cols=36 Identities=6% Similarity=-0.065 Sum_probs=25.7
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+++++|+|+ |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 25 AQPKVWLIT--GVAGFI--GSNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp HSCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 345677766 444443 357889999999999998754
No 430
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=21.98 E-value=38 Score=33.44 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=28.8
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
..++||+|+-.+..| +.+|+.|.++|++||++...+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 346799999776554 578999999999999998754
No 431
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=21.94 E-value=1.4e+02 Score=22.44 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=22.0
Q ss_pred CCCCEEEeCCCCc--chHHHHHHh-------CCCeEEEech
Q 046605 118 HKPDCLVADMFFP--WATDAAAKF-------GIPRLVFHGT 149 (487)
Q Consensus 118 ~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 149 (487)
.+||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 58 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 98 (143)
T 2qvg_A 58 IHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAA 98 (143)
T ss_dssp CCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCC
Confidence 6899999997654 455555543 4677777654
No 432
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=21.88 E-value=89 Score=26.93 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=15.7
Q ss_pred hHHHHHHHhhCCCCEEEeCC
Q 046605 108 QKPLEQLLQEHKPDCLVADM 127 (487)
Q Consensus 108 ~~~l~~~l~~~~pDlVI~D~ 127 (487)
...+.+++++.+||+|++..
T Consensus 84 ~~~l~~~ir~~~P~~V~t~~ 103 (227)
T 1uan_A 84 RLKLAQALRRLRPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHHCEEEEEEEC
T ss_pred HHHHHHHHHHhCCCEEEeCC
Confidence 45677888888999999753
No 433
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=21.73 E-value=72 Score=24.22 Aligned_cols=37 Identities=11% Similarity=-0.107 Sum_probs=26.3
Q ss_pred eEEEEEcCCCCCCh--HHHHHHHHHHHhCC--CeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHM--IPTVDMAKLFTTRG--VKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~--~p~l~La~~L~~rG--h~Vt~~~~~ 44 (487)
+|++|+-....-.. +..+..|....++| |+|.++...
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 67777655432222 34677899999999 899999885
No 434
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.55 E-value=1.3e+02 Score=26.57 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=34.4
Q ss_pred CceEEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCccch
Q 046605 6 CQLHIFFFP--FLAHGHMIPTVDMAKLFTTRGVKASVITTPGNAPHL 50 (487)
Q Consensus 6 ~~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 50 (487)
+++|+++++ -|+-|-..-...||..|+++|.+|.++-.+.....+
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~~~l 126 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQ 126 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSSCCH
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCCccH
Confidence 345555554 468899999999999999999999999776544333
No 435
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=21.51 E-value=51 Score=30.19 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=26.8
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRG-VKASVITTP 44 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 44 (487)
+++|.|+-.|..| ..+|+.|+++| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 3689999877666 78899999999 999987653
No 436
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=21.50 E-value=65 Score=29.98 Aligned_cols=38 Identities=8% Similarity=-0.165 Sum_probs=26.8
Q ss_pred CCceEEEEEcCCCC-CCh---HHHHHHHHHHHhCCCeEEEEe
Q 046605 5 ICQLHIFFFPFLAH-GHM---IPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 5 ~~~~~Il~~~~~~~-GH~---~p~l~La~~L~~rGh~Vt~~~ 42 (487)
|++.||+++..|.. =|- .....++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 45679988865533 343 345578999999999998874
No 437
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=21.38 E-value=78 Score=27.65 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=21.7
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVIT 42 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 42 (487)
+++|+++..--.--..-+-.....++++|++|++++
T Consensus 3 ~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 3 GLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 456666543333334445555566778999987774
No 438
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=21.35 E-value=1.3e+02 Score=23.76 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=25.2
Q ss_pred HHHHHHhhCCCCEEEeCCCCc--chHHHHH----HhCCCeEEEec
Q 046605 110 PLEQLLQEHKPDCLVADMFFP--WATDAAA----KFGIPRLVFHG 148 (487)
Q Consensus 110 ~l~~~l~~~~pDlVI~D~~~~--~~~~~A~----~~giP~v~~~~ 148 (487)
+..+.+++.+||+||.|.... .+..+.+ ...+|.|.++.
T Consensus 62 ~al~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~ 106 (164)
T 3t8y_A 62 EAVEKAIELKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSS 106 (164)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEES
T ss_pred HHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEec
Confidence 344555667899999998654 3444443 33577777765
No 439
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=21.24 E-value=1.2e+02 Score=26.10 Aligned_cols=42 Identities=17% Similarity=0.333 Sum_probs=28.7
Q ss_pred HHHHHHHhhCCCCEEEeCCCCc--chHHHHHHh-----CCCeEEEechh
Q 046605 109 KPLEQLLQEHKPDCLVADMFFP--WATDAAAKF-----GIPRLVFHGTS 150 (487)
Q Consensus 109 ~~l~~~l~~~~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 150 (487)
.+..+.++..+||+||.|...+ -+..+++.+ ++|+|.++...
T Consensus 57 ~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 57 AQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3445566667899999998655 355555543 58888887654
No 440
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=21.22 E-value=97 Score=27.15 Aligned_cols=32 Identities=13% Similarity=-0.002 Sum_probs=24.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 9 HIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 9 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 56677666544 347899999999999998754
No 441
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=21.20 E-value=87 Score=26.50 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=29.2
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITTPG 45 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~ 45 (487)
.|.||+|+-++....+- +...+..|.++ |++|++++...
T Consensus 2 ~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~ 41 (206)
T 3f5d_A 2 SLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDP 41 (206)
T ss_dssp -CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSS
T ss_pred CccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCC
Confidence 36789998888776654 34567778877 99999999864
No 442
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=21.10 E-value=51 Score=28.07 Aligned_cols=33 Identities=12% Similarity=-0.010 Sum_probs=23.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+++||+|+-.|..| ..+++.|.++||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45789888544333 4578889999999988764
No 443
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=21.06 E-value=87 Score=25.91 Aligned_cols=37 Identities=3% Similarity=-0.073 Sum_probs=24.4
Q ss_pred ceEEEEEcCCCC---CChHHHH-HHHHHHHhCC--CeEEEEeC
Q 046605 7 QLHIFFFPFLAH---GHMIPTV-DMAKLFTTRG--VKASVITT 43 (487)
Q Consensus 7 ~~~Il~~~~~~~---GH~~p~l-~La~~L~~rG--h~Vt~~~~ 43 (487)
||||+++..... |...-+. .+++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 468887765443 6665554 4566777776 88887764
No 444
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=20.95 E-value=1.2e+02 Score=25.43 Aligned_cols=41 Identities=15% Similarity=0.256 Sum_probs=27.0
Q ss_pred HHHHhhCCCCEEEeCCCCc--chHHHHHH----hCCCeEEEechhHH
Q 046605 112 EQLLQEHKPDCLVADMFFP--WATDAAAK----FGIPRLVFHGTSFF 152 (487)
Q Consensus 112 ~~~l~~~~pDlVI~D~~~~--~~~~~A~~----~giP~v~~~~~~~~ 152 (487)
.+.++..+||+||.|...+ .+..+++. -++|+|.++.....
T Consensus 41 l~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~~ 87 (230)
T 2oqr_A 41 LAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSE 87 (230)
T ss_dssp HHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHHH
T ss_pred HHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCcH
Confidence 3444556899999998654 34444443 36899988776543
No 445
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.82 E-value=1.2e+02 Score=27.40 Aligned_cols=42 Identities=5% Similarity=0.009 Sum_probs=29.6
Q ss_pred CCceEEEEEcCCCCC--Ch-HHHHHHHHHHHhCCCeEEEEeCCCC
Q 046605 5 ICQLHIFFFPFLAHG--HM-IPTVDMAKLFTTRGVKASVITTPGN 46 (487)
Q Consensus 5 ~~~~~Il~~~~~~~G--H~-~p~l~La~~L~~rGh~Vt~~~~~~~ 46 (487)
.+|+|++|+..|..| .. .-...+.+.|.++|+++++..+..-
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 557788888777544 32 2345778888899999998876543
No 446
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.78 E-value=61 Score=28.22 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=25.9
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
...+||.|+-.|..| ..||+.|+++||+|+++...
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 456889999655444 46799999999999988653
No 447
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=20.75 E-value=56 Score=29.22 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=23.9
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
+||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 578888665544 5678999999999997754
No 448
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=20.71 E-value=1.5e+02 Score=25.16 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=25.1
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|...++.++++++ |+.|-+ -..+++.|.++|++|+++...
T Consensus 1 m~~~~~~~~vlVT--Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLRALVT--GAGKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCEEEEe--CCCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3333455565554 333433 357899999999999887653
No 449
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=20.69 E-value=94 Score=26.50 Aligned_cols=34 Identities=9% Similarity=0.130 Sum_probs=23.9
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 345666655432 3468899999999998887653
No 450
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.59 E-value=4.1e+02 Score=25.52 Aligned_cols=146 Identities=12% Similarity=0.039 Sum_probs=76.0
Q ss_pred CCcEEEEeccCcccCCHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecccchHhhhc
Q 046605 285 PNSVVYICFGSVANFTSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGWAPQVLILD 364 (487)
Q Consensus 285 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~vp~~~ll~ 364 (487)
.+.++.|..|... ...++.|.+.|.++.+.-+... +.+.......++.+..---+...|.
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~~-------------~~~~~l~~~~~i~~~~~~~~~~~l~ 71 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTFI-------------PQFTVWANEGMLTLVEGPFDETLLD 71 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSCC-------------HHHHHHHTTTSCEEEESSCCGGGGT
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCCC-------------HHHHHHHhcCCEEEEECCCCccccC
Confidence 4568888888655 3344556677888877754321 1222221223454432222233455
Q ss_pred ccCccccccccCchh-----HHHHhhcCCcE--eccCccccchhhHHHHHHH--hhceEeecccccccccCCcc-CHHHH
Q 046605 365 HEAVGGFVTHCGWNS-----ILEGVTAGVPL--VTWPVYAEQFYNEKIVNEV--LKIGIGVGIQKWCRIVGDFV-KREAI 434 (487)
Q Consensus 365 ~~~~~~~I~HGG~gs-----~~eal~~GvP~--l~~P~~~DQ~~~a~rv~~~--~G~G~~l~~~~~~~~~~~~~-~~~~l 434 (487)
.+++ +|.--|.-. ..+|-..|+|+ +--|-..|...-| .+ ++ +-+|++ .+ +.+. -+..|
T Consensus 72 ~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~-~~~~l~iaIs--T~------Gksp~la~~i 139 (457)
T 1pjq_A 72 SCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-II-DRSPLMVAVS--SG------GTSPVLARLL 139 (457)
T ss_dssp TCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EE-EETTEEEEEE--CT------TSCHHHHHHH
T ss_pred CccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EE-EeCCeEEEEE--CC------CCChHHHHHH
Confidence 5554 777666553 44556678887 3333333322111 11 12 234444 32 0122 26788
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 046605 435 VKAVNEIMMGDRAEEMRSRAKAFGEMAKR 463 (487)
Q Consensus 435 ~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 463 (487)
++.|.++|..+ -..+-+.+.++++++++
T Consensus 140 r~~ie~~l~~~-~~~~~~~~~~~R~~~~~ 167 (457)
T 1pjq_A 140 REKLESLLPQH-LGQVARYAGQLRARVKK 167 (457)
T ss_dssp HHHHHHHSCTT-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcchh-HHHHHHHHHHHHHHHHh
Confidence 88888888522 34666777777777664
No 451
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=20.57 E-value=1.3e+02 Score=26.39 Aligned_cols=30 Identities=30% Similarity=0.224 Sum_probs=23.0
Q ss_pred CCCCEEEeCCCCc-------chHHHHHHhCCCeEEEe
Q 046605 118 HKPDCLVADMFFP-------WATDAAAKFGIPRLVFH 147 (487)
Q Consensus 118 ~~pDlVI~D~~~~-------~~~~~A~~~giP~v~~~ 147 (487)
.+||+|++|..-. .|.-+.-.+|+|.|.+.
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 4899999997544 25556777889999884
No 452
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=20.54 E-value=1.6e+02 Score=28.36 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=35.7
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCCccc
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTR-GVKASVITTPGNAPH 49 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~ 49 (487)
..|+|+..++.|-..-...||..|+++ |++|.++..+.+...
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~~ 143 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPA 143 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSSTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCcc
Confidence 455666677999999999999999999 999999998877654
No 453
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=20.49 E-value=2e+02 Score=23.72 Aligned_cols=40 Identities=13% Similarity=-0.034 Sum_probs=30.0
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
.+++||+|+.+++... .-+....+.|.++|++|++++...
T Consensus 21 ~~~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred ccCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 3457899998875543 345667778888999999999864
No 454
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=20.42 E-value=1.2e+02 Score=23.53 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEecCCCCCCCcccccccCchhHHHHhcCCCcEeecc-cchHhhhcccCccccccccCch
Q 046605 300 TSAQLMEIAMGLEASGQNFIWVVRKNKNNGGEEEKEDWLPEGFEKRMEGKGLIIRGW-APQVLILDHEAVGGFVTHCGWN 378 (487)
Q Consensus 300 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~-vp~~~ll~~~~~~~~I~HGG~g 378 (487)
++.....+...|+..|+.++....... +. +. -+ +.....+.+.+| .|..+=+
T Consensus 21 ~~~~r~~l~~~L~~~G~~~v~~a~~g~-----~a----l~-~~--~~~~~DlillD~~MP~mdG~--------------- 73 (134)
T 3to5_A 21 FSTMRRIVKNLLRDLGFNNTQEADDGL-----TA----LP-ML--KKGDFDFVVTDWNMPGMQGI--------------- 73 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEESSHH-----HH----HH-HH--HHHCCSEEEEESCCSSSCHH---------------
T ss_pred CHHHHHHHHHHHHHcCCcEEEEECCHH-----HH----HH-HH--HhCCCCEEEEcCCCCCCCHH---------------
Confidence 455555566788889987554333222 11 10 11 112455777665 3322111
Q ss_pred hHHHHhh-----cCCcEeccCccccchhhHHHHHHHhhceEeecccccccccCCccCHHHHHHHHHHHhc
Q 046605 379 SILEGVT-----AGVPLVTWPVYAEQFYNEKIVNEVLKIGIGVGIQKWCRIVGDFVKREAIVKAVNEIMM 443 (487)
Q Consensus 379 s~~eal~-----~GvP~l~~P~~~DQ~~~a~rv~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~~i~~ll~ 443 (487)
.+.+.+. ..+|+|.+-...+.. ...+. .+.|+--.+.+ -++.++|.++|++++.
T Consensus 74 el~~~ir~~~~~~~ipvI~lTa~~~~~-~~~~~-~~~Ga~~yl~K---------P~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 74 DLLKNIRADEELKHLPVLMITAEAKRE-QIIEA-AQAGVNGYIVK---------PFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESSCCHH-HHHHH-HHTTCCEEEES---------SCCHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCCeEEEEECCCCHH-HHHHH-HHCCCCEEEEC---------CCCHHHHHHHHHHHHh
Confidence 2233332 468988887655544 44455 37788777776 4899999999999885
No 455
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=20.42 E-value=1e+02 Score=29.75 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=27.2
Q ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 5 ICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 5 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
.+..||+|+-.+..| +++|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456799999887655 3469999999999998755
No 456
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=20.38 E-value=1.7e+02 Score=25.38 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=25.2
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|.+.++.++ ++++.++ |- --..+++.|+++|++|+++.-.
T Consensus 1 m~~~l~~k~-vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 1 MDMGISGKV-AVITGSS-SG--IGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCCCTTCE-EEEESCS-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCE-EEEECCC-ch--HHHHHHHHHHHCCCEEEEEcCC
Confidence 444344444 4444333 32 2468999999999999887653
No 457
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.37 E-value=1.6e+02 Score=25.58 Aligned_cols=40 Identities=8% Similarity=-0.059 Sum_probs=24.2
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|...++.++++ ++.+ .|- --..+++.|+++||+|+++.-.
T Consensus 1 M~~~l~~k~vl-VTGa-s~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 1 MSGRLTGKVAL-VSGG-ARG--MGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp -CCTTTTCEEE-EETT-TSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCEEE-EeCC-CCH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 44333444444 4433 332 2357899999999999987653
No 458
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.37 E-value=1.5e+02 Score=25.26 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=26.7
Q ss_pred eEEEEEcCCCCCC--hHHHHHHHHHHHhCCCeEEEEeC
Q 046605 8 LHIFFFPFLAHGH--MIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 8 ~~Il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
...+++..|..|+ ..-+..+++.|.++|++|..+--
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 3455666666676 66778899999999999876544
No 459
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.34 E-value=79 Score=28.27 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=24.4
Q ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 7 QLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 7 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
+++|+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECCc
Confidence 5567665 3344442 467899999999999887653
No 460
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=20.31 E-value=1.4e+02 Score=25.50 Aligned_cols=40 Identities=10% Similarity=0.010 Sum_probs=25.1
Q ss_pred CCCCCCceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 1 MASGICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 1 m~~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
|+..++..++ +++ |+.|- --..+++.|.++||+|+++...
T Consensus 1 m~~~~~~~~v-lVt-Gasgg--iG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 1 MEIKLQGKVS-LVT-GSTRG--IGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CCCCCTTCEE-EET-TCSSH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCEE-EEE-CCCch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5543444444 444 33343 2457899999999999988653
No 461
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=20.23 E-value=76 Score=27.43 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 046605 23 PTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 23 p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
--.++|++|.++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 34678999999999999987653
No 462
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=20.22 E-value=1.4e+02 Score=23.91 Aligned_cols=37 Identities=8% Similarity=0.084 Sum_probs=27.5
Q ss_pred eEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeCC
Q 046605 8 LHIFFFPFLAHGHMIPTV-DMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~ 44 (487)
|||+++-...+|+.--+. .|++.|.+.|++|.++.-.
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 467777666778887655 5788898999999887654
No 463
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.19 E-value=47 Score=30.21 Aligned_cols=32 Identities=19% Similarity=-0.021 Sum_probs=26.0
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTPG 45 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 45 (487)
|||+|+-.|+.|- .+|..|. +||+|+++....
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 6899997777764 5688888 999999998753
No 464
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.16 E-value=70 Score=29.37 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=22.8
Q ss_pred HHHhhCCCCEEEeCCCCcchHHHHHHhCCCeEEEec
Q 046605 113 QLLQEHKPDCLVADMFFPWATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 113 ~~l~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~ 148 (487)
+.+.+.+||+||..........--+..|+|++.+..
T Consensus 110 E~i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 110 EACVAATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 334456999999875422223333566899998853
No 465
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=20.13 E-value=1e+02 Score=28.65 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=25.1
Q ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 046605 6 CQLHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITTP 44 (487)
Q Consensus 6 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 44 (487)
+|++|+|+ |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 28 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT--GAGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE--CCccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 45677666 444433 357889999999999998764
No 466
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=20.12 E-value=4.3e+02 Score=22.97 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=21.5
Q ss_pred hCCCCEEEeCCCCcc----hHHHHHHhCCCeEEEec
Q 046605 117 EHKPDCLVADMFFPW----ATDAAAKFGIPRLVFHG 148 (487)
Q Consensus 117 ~~~pDlVI~D~~~~~----~~~~A~~~giP~v~~~~ 148 (487)
+.++|.||..+.... ....+...|+|+|.+..
T Consensus 59 ~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 59 ATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred HcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 358999887665432 33346667999998843
No 467
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=20.11 E-value=1.5e+02 Score=27.19 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=26.1
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHh--CCCeEEEEeCC
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTT--RGVKASVITTP 44 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~--rGh~Vt~~~~~ 44 (487)
.+++++|+|+ |+.|-+ -..|++.|.+ +||+|+.+.-.
T Consensus 7 ~~~~~~vlVT--GatG~I--G~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILIT--GGAGFV--GSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEE--TTTSHH--HHHHHHHHHHHCTTSEEEEEECC
T ss_pred hcCCCEEEEE--CCCCHH--HHHHHHHHHhhCCCCeEEEEECC
Confidence 3566787776 333433 3478899999 99999998753
No 468
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=20.05 E-value=45 Score=30.41 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=24.7
Q ss_pred CCCceEEEEEcCCCCCChHHHHHHHHHHHhCCC--eEEEEeCC
Q 046605 4 GICQLHIFFFPFLAHGHMIPTVDMAKLFTTRGV--KASVITTP 44 (487)
Q Consensus 4 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 44 (487)
+.++|||+|+-. |.+--. +|..|+.+|| +|+++...
T Consensus 4 ~~~~mkI~IiGa---G~vG~~--~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 4 TVKPTKLAVIGA---GAVGST--LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp ---CCEEEEECC---SHHHHH--HHHHHHHTTCCSEEEEECSS
T ss_pred CCCCCEEEEECC---CHHHHH--HHHHHHhCCCCCEEEEEeCC
Confidence 355689998865 444333 6778999999 99988764
No 469
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=20.04 E-value=63 Score=27.17 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=22.7
Q ss_pred eEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 046605 8 LHIFFFPFLAHGHMIPTVDMAKLFTTRGVKASVITT 43 (487)
Q Consensus 8 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 43 (487)
|||+|+- +.|.+- ..+++.|.++||+|+++..
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4677774 244333 4678999999999998765
No 470
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.03 E-value=1.9e+02 Score=22.65 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=27.3
Q ss_pred ceEEEEE-cCCCCCChHH--HHHHHHHHHhCCCeE-EEEeCC
Q 046605 7 QLHIFFF-PFLAHGHMIP--TVDMAKLFTTRGVKA-SVITTP 44 (487)
Q Consensus 7 ~~~Il~~-~~~~~GH~~p--~l~La~~L~~rGh~V-t~~~~~ 44 (487)
.||++|+ ..+-+|.-.. .+.+|+++.+.||+| .++-..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 4667655 4556666554 577899999999999 777664
No 471
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=20.01 E-value=1e+02 Score=28.60 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=21.1
Q ss_pred ccCccccccc-cCchhHHHHhhcCCcEeccCc
Q 046605 365 HEAVGGFVTH-CGWNSILEGVTAGVPLVTWPV 395 (487)
Q Consensus 365 ~~~~~~~I~H-GG~gs~~eal~~GvP~l~~P~ 395 (487)
.+++ +|++ .+..+...|-..|+|.+.+-.
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEec
Confidence 4776 6666 566667777889999988754
No 472
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=20.01 E-value=1.2e+02 Score=27.90 Aligned_cols=10 Identities=20% Similarity=0.305 Sum_probs=7.4
Q ss_pred CCCEEEeCCC
Q 046605 119 KPDCLVADMF 128 (487)
Q Consensus 119 ~pDlVI~D~~ 128 (487)
..|+|.+|.-
T Consensus 229 ~aDvvy~~~w 238 (324)
T 1js1_X 229 GADFIYAKNW 238 (324)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEecCc
Confidence 6788888754
Done!