Query 046607
Match_columns 34
No_of_seqs 23 out of 25
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 03:50:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046607.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046607hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2k35_A Hydramacin-1; antimicro 42.0 5.4 0.00019 21.3 0.0 14 6-19 6-19 (60)
2 2ln8_A Theromacin; antimicrobi 40.1 12 0.00042 20.7 1.3 13 7-19 4-16 (75)
3 3tbg_A Cytochrome P450 2D6; mo 29.8 13 0.00044 21.7 0.3 12 18-29 391-402 (479)
4 1za0_A Possible acyl-[acyl-car 29.3 14 0.00048 23.5 0.4 18 6-23 118-144 (275)
5 4a1x_C CP5-46-A peptide; hydro 25.2 24 0.00083 16.1 0.7 10 15-24 10-19 (26)
6 3k9v_A 1,25-dihydroxyvitamin D 25.2 18 0.00063 21.1 0.4 12 18-29 401-412 (482)
7 3dax_A Cytochrome P450 7A1; ch 23.0 32 0.0011 20.2 1.2 12 17-28 387-398 (491)
8 3ld6_A Lanosterol 14-alpha dem 22.4 21 0.00071 21.2 0.2 10 19-28 372-381 (461)
9 1vsy_3 Proteasome activator BL 21.4 56 0.0019 17.8 1.8 14 20-33 27-41 (76)
10 3qz1_A Steroid 21-hydroxylase; 21.1 33 0.0011 20.3 0.9 11 18-28 401-411 (496)
No 1
>2k35_A Hydramacin-1; antimicrobial protein; NMR {Hydra}
Probab=42.03 E-value=5.4 Score=21.34 Aligned_cols=14 Identities=14% Similarity=0.465 Sum_probs=10.3
Q ss_pred hhHhhhhcCCCCCC
Q 046607 6 YTEWIALSSQGGSG 19 (34)
Q Consensus 6 LTaWRRCnP~gg~G 19 (34)
++.|-||+|+.-.|
T Consensus 6 ~e~wsRCs~~ss~~ 19 (60)
T 2k35_A 6 WETWSRCTKWSQGG 19 (60)
T ss_dssp BSSHHHHHHCCTTT
T ss_pred hhhhhhcChhhhcc
Confidence 56788999986543
No 2
>2ln8_A Theromacin; antimicrobial peptide, antimicrobial protein; NMR {Hirudo medicinalis}
Probab=40.09 E-value=12 Score=20.74 Aligned_cols=13 Identities=23% Similarity=0.458 Sum_probs=9.7
Q ss_pred hHhhhhcCCCCCC
Q 046607 7 TEWIALSSQGGSG 19 (34)
Q Consensus 7 TaWRRCnP~gg~G 19 (34)
..|-||+||..+|
T Consensus 4 e~WSRCt~wss~~ 16 (75)
T 2ln8_A 4 EDWSRCSPSTASA 16 (75)
T ss_dssp HHHTTSSCSCCCC
T ss_pred chhhhcCCccccc
Confidence 4688999987654
No 3
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=29.85 E-value=13 Score=21.73 Aligned_cols=12 Identities=25% Similarity=0.648 Sum_probs=8.5
Q ss_pred CCCCCCCCCCCC
Q 046607 18 SGFDPPRWFDEE 29 (34)
Q Consensus 18 ~G~DPprw~~~~ 29 (34)
.=|||+||-+++
T Consensus 391 ~~F~PeRfl~~~ 402 (479)
T 3tbg_A 391 FRFHPEHFLDAQ 402 (479)
T ss_dssp TSCCGGGGBCTT
T ss_pred cccCccccCCCC
Confidence 458889987653
No 4
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=29.28 E-value=14 Score=23.48 Aligned_cols=18 Identities=6% Similarity=0.014 Sum_probs=6.9
Q ss_pred hhHhhhhcC---------CCCCCCCCC
Q 046607 6 YTEWIALSS---------QGGSGFDPP 23 (34)
Q Consensus 6 LTaWRRCnP---------~gg~G~DPp 23 (34)
|.+||+|+| +.+.||||+
T Consensus 118 L~~sg~vdp~~lE~~~~~~i~~g~~~~ 144 (275)
T 1za0_A 118 LVVTREVDPVANEDVRVQHVMKGYRAE 144 (275)
T ss_dssp HHHHTCSCTTTTTCTTC----------
T ss_pred HHHhCCCCHHHHHHHHHHHhhcCCCCC
Confidence 456788998 468899986
No 5
>4a1x_C CP5-46-A peptide; hydrolase-peptide complex, unmodified inhibitory peptides; 1.90A {Synthetic construct} PDB: 4a1t_C
Probab=25.23 E-value=24 Score=16.12 Aligned_cols=10 Identities=40% Similarity=0.916 Sum_probs=7.4
Q ss_pred CCCCCCCCCC
Q 046607 15 QGGSGFDPPR 24 (34)
Q Consensus 15 ~gg~G~DPpr 24 (34)
+-|-||||-+
T Consensus 10 ldgpgydpih 19 (26)
T 4a1x_C 10 LDGPGYDPIH 19 (26)
T ss_pred ecCCCCCcee
Confidence 4578999954
No 6
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=25.22 E-value=18 Score=21.10 Aligned_cols=12 Identities=42% Similarity=1.085 Sum_probs=8.3
Q ss_pred CCCCCCCCCCCC
Q 046607 18 SGFDPPRWFDEE 29 (34)
Q Consensus 18 ~G~DPprw~~~~ 29 (34)
.=|||.||-+++
T Consensus 401 ~~F~PeRfl~~~ 412 (482)
T 3k9v_A 401 HKFRPERWLQKE 412 (482)
T ss_dssp TSCCGGGGTCTT
T ss_pred CccCccccCCCC
Confidence 458888887653
No 7
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=23.05 E-value=32 Score=20.24 Aligned_cols=12 Identities=33% Similarity=0.501 Sum_probs=8.8
Q ss_pred CCCCCCCCCCCC
Q 046607 17 GSGFDPPRWFDE 28 (34)
Q Consensus 17 g~G~DPprw~~~ 28 (34)
..-|||.||-++
T Consensus 387 p~~F~PeRfl~~ 398 (491)
T 3dax_A 387 PLTFKYDRYLDE 398 (491)
T ss_dssp TTSCCTTTTBCT
T ss_pred HHHcCCccccCC
Confidence 356999999753
No 8
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=22.39 E-value=21 Score=21.18 Aligned_cols=10 Identities=30% Similarity=1.019 Sum_probs=7.0
Q ss_pred CCCCCCCCCC
Q 046607 19 GFDPPRWFDE 28 (34)
Q Consensus 19 G~DPprw~~~ 28 (34)
=|||.||-++
T Consensus 372 ~F~PeRfl~~ 381 (461)
T 3ld6_A 372 DFNPDRYLQD 381 (461)
T ss_dssp SCCGGGGGSC
T ss_pred ccCccccCCC
Confidence 3788888654
No 9
>1vsy_3 Proteasome activator BLM10; 20S proteasome BLM10, hydrolase, nucleus, phosphoprotein, PR proteasome, threonine protease; 3.00A {Saccharomyces cerevisiae} PDB: 3l5q_E
Probab=21.37 E-value=56 Score=17.84 Aligned_cols=14 Identities=50% Similarity=1.286 Sum_probs=10.6
Q ss_pred CCC-CCCCCCCCCCC
Q 046607 20 FDP-PRWFDEESPPE 33 (34)
Q Consensus 20 ~DP-prw~~~~~p~~ 33 (34)
+|| .|||....|+.
T Consensus 27 ~Dp~Sr~faR~rprt 41 (76)
T 1vsy_3 27 YDPSSRWFSRSVRPE 41 (76)
T ss_dssp TCTTSTTCCCSSCCS
T ss_pred cCccccchhccCCCC
Confidence 677 89998877653
No 10
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=21.07 E-value=33 Score=20.27 Aligned_cols=11 Identities=27% Similarity=0.760 Sum_probs=6.6
Q ss_pred CCCCCCCCCCC
Q 046607 18 SGFDPPRWFDE 28 (34)
Q Consensus 18 ~G~DPprw~~~ 28 (34)
.=|||.||-++
T Consensus 401 ~~F~PeR~l~~ 411 (496)
T 3qz1_A 401 HEFRPDRFLEP 411 (496)
T ss_dssp TSCCCCCCC--
T ss_pred ccCCcccccCC
Confidence 45788888653
Done!