Query 046608
Match_columns 256
No_of_seqs 134 out of 1878
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 03:52:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3juk_A UDP-glucose pyrophospho 100.0 1.1E-40 3.7E-45 275.6 24.9 230 1-236 3-271 (281)
2 4ecm_A Glucose-1-phosphate thy 100.0 8.2E-40 2.8E-44 268.6 27.2 230 1-236 25-260 (269)
3 2e3d_A UTP--glucose-1-phosphat 100.0 1.6E-37 5.3E-42 259.2 27.7 230 1-235 9-281 (302)
4 1tzf_A Glucose-1-phosphate cyt 100.0 2.1E-37 7.4E-42 252.9 26.8 228 1-235 3-250 (259)
5 1mc3_A Glucose-1-phosphate thy 100.0 4.3E-37 1.5E-41 255.1 25.6 230 1-235 4-242 (296)
6 1lvw_A Glucose-1-phosphate thy 100.0 9.2E-37 3.1E-41 253.0 27.2 230 1-235 4-242 (295)
7 1fxo_A Glucose-1-phosphate thy 100.0 1.4E-36 4.9E-41 251.8 26.9 230 1-235 3-241 (293)
8 3brk_X Glucose-1-phosphate ade 100.0 5.3E-37 1.8E-41 267.0 22.9 235 1-236 13-286 (420)
9 2ux8_A Glucose-1-phosphate uri 100.0 2.6E-37 8.8E-42 257.3 19.4 231 1-236 15-280 (297)
10 1yp2_A Glucose-1-phosphate ade 100.0 1.6E-36 5.6E-41 266.2 24.4 236 1-237 21-298 (451)
11 3pnn_A Conserved domain protei 100.0 1.7E-36 5.9E-41 252.6 21.6 226 1-237 6-293 (303)
12 2pa4_A UTP-glucose-1-phosphate 100.0 4.5E-36 1.6E-40 252.4 24.4 231 1-234 13-281 (323)
13 4evw_A Nucleoside-diphosphate- 100.0 1.1E-36 3.6E-41 247.8 19.3 218 3-232 2-244 (255)
14 3st8_A Bifunctional protein GL 100.0 1.3E-32 4.3E-37 244.4 25.2 230 2-235 14-259 (501)
15 2qh5_A PMI, ALGA, mannose-6-ph 100.0 6.2E-34 2.1E-38 237.8 15.5 226 1-233 5-282 (308)
16 2ggo_A 401AA long hypothetical 100.0 7.2E-33 2.5E-37 239.6 21.4 232 1-253 1-243 (401)
17 3oam_A 3-deoxy-manno-octuloson 100.0 8.7E-32 3E-36 218.7 22.0 221 2-236 4-250 (252)
18 1hm9_A GLMU, UDP-N-acetylgluco 100.0 8E-31 2.7E-35 231.1 24.0 223 2-236 13-251 (468)
19 1jyk_A LICC protein, CTP:phosp 100.0 1.1E-30 3.6E-35 212.5 21.0 213 1-234 26-251 (254)
20 4fce_A Bifunctional protein GL 100.0 2.8E-30 9.5E-35 227.1 21.9 222 1-237 9-246 (459)
21 2x65_A Mannose-1-phosphate gua 100.0 1.7E-31 5.9E-36 225.1 12.6 222 1-229 2-270 (336)
22 3tqd_A 3-deoxy-manno-octuloson 100.0 2E-29 6.8E-34 204.4 20.5 215 2-231 11-254 (256)
23 3k8d_A 3-deoxy-manno-octuloson 100.0 2.7E-29 9.1E-34 204.5 21.1 218 1-232 19-262 (264)
24 2cu2_A Putative mannose-1-phos 100.0 2.7E-30 9.4E-35 217.8 12.3 222 1-231 3-267 (337)
25 2v0h_A Bifunctional protein GL 100.0 2.9E-28 1E-32 214.0 21.1 221 1-236 6-242 (456)
26 4fcu_A 3-deoxy-manno-octuloson 100.0 6.8E-28 2.3E-32 195.2 21.2 219 2-235 3-250 (253)
27 1vic_A 3-deoxy-manno-octuloson 100.0 3.9E-27 1.3E-31 192.4 24.4 221 1-235 3-253 (262)
28 1h7e_A 3-deoxy-manno-octuloson 100.0 5.6E-27 1.9E-31 189.6 21.6 218 1-236 3-240 (245)
29 2y6p_A 3-deoxy-manno-octuloson 100.0 4.5E-27 1.5E-31 188.8 20.3 212 2-233 4-231 (234)
30 2xme_A CTP-inositol-1-phosphat 99.9 4.6E-26 1.6E-30 182.8 16.2 208 1-232 19-231 (232)
31 2vsh_A TARI, 2-C-methyl-D-eryt 99.9 1.3E-24 4.4E-29 174.6 15.7 215 1-233 3-233 (236)
32 1ezi_A CMP-N-acetylneuraminic 99.9 2.2E-24 7.4E-29 172.5 16.8 203 2-233 6-223 (228)
33 3f1c_A Putative 2-C-methyl-D-e 99.9 4.7E-24 1.6E-28 172.5 17.7 220 2-238 5-237 (246)
34 2xwl_A 2-C-methyl-D-erythritol 99.9 3E-24 1E-28 171.1 15.5 210 1-234 3-219 (223)
35 1qwj_A Cytidine monophospho-N- 99.9 7.6E-24 2.6E-28 169.5 15.0 203 2-235 5-222 (229)
36 1vgw_A 4-diphosphocytidyl-2C-m 99.9 4.1E-23 1.4E-27 165.3 18.6 210 1-232 7-227 (231)
37 2dpw_A Hypothetical protein TT 99.9 1.3E-24 4.4E-29 174.3 7.6 194 1-227 3-231 (232)
38 2yc3_A 2-C-methyl-D-erythritol 99.9 2.4E-23 8.3E-28 166.4 14.7 211 2-233 6-224 (228)
39 3rsb_A Adenosylcobinamide-phos 99.9 1.3E-22 4.6E-27 158.4 15.2 184 1-233 1-191 (196)
40 2waw_A MOBA relate protein; un 99.9 1.9E-21 6.6E-26 151.9 19.4 185 2-233 7-195 (199)
41 1vpa_A 2-C-methyl-D-erythritol 99.9 1.2E-21 3.9E-26 157.2 17.8 210 1-235 14-229 (234)
42 2wee_A MOBA-related protein; u 99.9 2.5E-21 8.6E-26 151.1 16.4 184 1-232 6-194 (197)
43 1i52_A 4-diphosphocytidyl-2-C- 99.9 1.9E-21 6.6E-26 156.2 15.3 215 1-236 8-230 (236)
44 3q80_A 2-C-methyl-D-erythritol 99.9 3.9E-21 1.3E-25 153.4 16.6 209 2-233 9-229 (231)
45 2icy_A Probable UTP-glucose-1- 99.9 1.2E-20 4.2E-25 163.8 20.1 231 1-235 80-374 (469)
46 2px7_A 2-C-methyl-D-erythritol 99.8 3.1E-21 1.1E-25 155.0 10.0 198 2-233 27-231 (236)
47 3ngw_A Molybdopterin-guanine d 99.8 6.6E-19 2.2E-23 138.4 17.0 179 1-235 1-194 (208)
48 2e8b_A Probable molybdopterin- 99.8 5.9E-20 2E-24 143.9 10.8 173 2-233 16-198 (201)
49 3d5n_A Q97W15_sulso; NESG, SSR 99.8 2E-20 6.9E-25 146.1 8.0 181 1-233 3-188 (197)
50 2i5k_A UTP--glucose-1-phosphat 99.8 7.2E-19 2.5E-23 153.6 16.4 224 1-234 93-390 (488)
51 1e5k_A Molybdopterin-guanine d 99.8 3.7E-19 1.3E-23 139.4 12.3 108 1-124 7-116 (201)
52 1w55_A ISPD/ISPF bifunctional 99.8 8.4E-19 2.9E-23 148.7 9.6 194 2-230 5-202 (371)
53 1jv1_A Glcnac1P uridyltransfer 99.8 3.5E-17 1.2E-21 143.5 17.9 183 1-187 103-341 (505)
54 2oeg_A UTP-glucose-1-phosphate 99.6 1.3E-14 4.4E-19 126.7 14.1 226 1-235 76-394 (505)
55 3oc9_A UDP-N-acetylglucosamine 99.6 1.4E-13 4.7E-18 116.7 17.2 181 2-187 37-274 (405)
56 2yqc_A UDP-N-acetylglucosamine 99.5 1E-13 3.4E-18 121.2 14.9 180 1-186 104-348 (486)
57 3r3i_A UTP--glucose-1-phosphat 98.5 2.6E-06 8.8E-11 74.3 13.9 224 2-233 129-428 (528)
58 2i5e_A Hypothetical protein MM 98.3 1E-06 3.5E-11 68.8 6.4 103 1-123 4-111 (211)
59 3gue_A UTP-glucose-1-phosphate 98.2 7.1E-05 2.4E-09 64.8 17.0 225 2-234 78-389 (484)
60 3ogz_A UDP-sugar pyrophosphory 98.0 3.6E-05 1.2E-09 68.4 11.4 145 2-150 116-312 (630)
61 3cgx_A Putative nucleotide-dip 97.9 0.0002 6.7E-09 57.0 12.7 89 31-127 37-130 (242)
62 1qg8_A Protein (spore coat pol 96.3 0.074 2.5E-06 41.7 12.3 97 29-128 11-116 (255)
63 3bcv_A Putative glycosyltransf 95.9 0.058 2E-06 41.9 9.7 101 29-135 15-119 (240)
64 1xhb_A Polypeptide N-acetylgal 95.8 0.13 4.5E-06 44.6 12.4 101 29-132 39-146 (472)
65 2iu8_A LPXD, UDP-3-O-[3-hydrox 95.1 3.3E-05 1.1E-09 65.6 -12.7 74 105-186 13-90 (374)
66 2d7i_A Polypeptide N-acetylgal 94.6 0.25 8.7E-06 44.0 10.5 100 26-130 118-226 (570)
67 2z86_A Chondroitin synthase; G 93.8 0.47 1.6E-05 42.6 10.7 104 26-133 99-207 (625)
68 3ckj_A Putative uncharacterize 92.8 0.24 8.4E-06 40.7 6.7 100 29-135 58-168 (329)
69 3f1y_A Mannosyl-3-phosphoglyce 92.5 0.67 2.3E-05 39.2 9.1 191 29-228 104-318 (387)
70 2ffu_A Ppgalnact-2, polypeptid 91.8 1.4 4.8E-05 38.4 10.6 98 26-131 72-177 (501)
71 4hg6_A Cellulose synthase subu 90.1 2.1 7E-05 39.9 10.5 100 25-128 145-266 (802)
72 2z86_A Chondroitin synthase; G 89.3 2.6 8.8E-05 37.8 10.3 95 29-129 385-483 (625)
73 2bo4_A Mannosylglycerate synth 87.3 4.5 0.00015 34.2 9.9 156 47-214 29-212 (397)
74 4fix_A UDP-galactofuranosyl tr 86.9 1.6 5.5E-05 39.6 7.4 101 29-134 190-302 (657)
75 3l7i_A Teichoic acid biosynthe 85.7 0.15 5.3E-06 46.8 0.0 95 29-126 12-109 (729)
76 1fo8_A Alpha-1,3-mannosyl-glyc 76.9 20 0.00069 29.5 9.7 96 26-123 8-121 (343)
77 2nxv_A ATP synthase subunits r 76.4 24 0.00083 27.2 10.4 41 84-127 60-101 (249)
78 1meo_A Phosophoribosylglycinam 73.8 27 0.00092 26.5 9.8 86 1-115 1-93 (209)
79 3p9x_A Phosphoribosylglycinami 73.6 15 0.0005 28.1 7.5 86 1-115 3-95 (211)
80 1jkx_A GART;, phosphoribosylgl 72.1 22 0.00075 27.0 8.3 103 1-139 1-110 (212)
81 2zqe_A MUTS2 protein; alpha/be 64.7 24 0.00082 22.3 6.9 48 22-69 3-56 (83)
82 2ywr_A Phosphoribosylglycinami 64.2 22 0.00076 27.1 6.8 74 33-115 14-94 (216)
83 3tqr_A Phosphoribosylglycinami 62.6 18 0.00061 27.7 6.0 91 33-139 18-114 (215)
84 3auf_A Glycinamide ribonucleot 62.3 30 0.001 26.7 7.3 95 29-139 31-132 (229)
85 3av3_A Phosphoribosylglycinami 60.2 29 0.00098 26.4 6.8 91 33-139 16-113 (212)
86 3vdp_A Recombination protein R 56.1 42 0.0014 25.5 6.9 53 33-85 137-191 (212)
87 3da8_A Probable 5'-phosphoribo 53.2 21 0.00072 27.3 4.9 74 32-115 24-103 (215)
88 3qd7_X Uncharacterized protein 47.8 43 0.0015 23.5 5.5 57 21-77 45-113 (137)
89 3c8v_A Putative acetyltransfer 42.7 1.7 5.9E-05 37.9 -3.0 107 72-187 112-237 (496)
90 3kcq_A Phosphoribosylglycinami 42.2 41 0.0014 25.6 5.0 74 32-115 20-96 (215)
91 3r8y_A 2,3,4,5-tetrahydropyrid 40.3 1.4 5E-05 34.2 -3.6 46 207-255 40-104 (240)
92 3sho_A Transcriptional regulat 40.2 1E+02 0.0035 22.2 10.6 97 30-136 25-121 (187)
93 2c0n_A A197; thermophil protei 38.2 1.2E+02 0.0043 22.7 6.9 85 96-192 48-136 (203)
94 1nvm_A HOA, 4-hydroxy-2-oxoval 37.3 86 0.0029 25.6 6.6 101 35-138 96-201 (345)
95 3o1l_A Formyltetrahydrofolate 37.0 43 0.0015 27.0 4.6 77 32-118 117-198 (302)
96 4ds3_A Phosphoribosylglycinami 36.3 66 0.0023 24.3 5.3 75 32-115 19-100 (209)
97 3l8m_A Probable thiamine pyrop 36.1 69 0.0024 24.2 5.5 57 1-66 1-62 (212)
98 3nrb_A Formyltetrahydrofolate 36.0 22 0.00076 28.5 2.8 93 32-139 100-196 (287)
99 3ij5_A 3-deoxy-D-manno-octulos 32.8 1.3E+02 0.0045 22.4 6.6 69 37-115 84-152 (211)
100 2dxq_A AGR_C_4057P, acetyltran 32.4 59 0.002 22.1 4.4 37 30-66 99-135 (150)
101 3ewb_X 2-isopropylmalate synth 32.4 1.6E+02 0.0055 23.4 7.3 95 31-128 79-191 (293)
102 3lub_A Putative creatinine ami 32.2 57 0.0019 25.5 4.5 44 33-76 98-142 (254)
103 3eeg_A 2-isopropylmalate synth 30.6 1.4E+02 0.0047 24.2 6.7 97 30-129 79-193 (325)
104 2dcl_A Hypothetical UPF0166 pr 30.3 52 0.0018 22.7 3.5 27 27-53 21-47 (127)
105 2d4p_A Hypothetical protein TT 29.8 63 0.0021 22.8 3.9 38 30-67 76-113 (141)
106 3mn1_A Probable YRBI family ph 28.8 1.6E+02 0.0055 21.2 6.4 69 37-115 54-122 (189)
107 1o51_A Hypothetical protein TM 28.8 45 0.0015 22.5 3.0 26 27-52 25-50 (114)
108 2pdo_A Acetyltransferase YPEA; 28.5 72 0.0024 21.4 4.2 37 30-66 87-123 (144)
109 3mmz_A Putative HAD family hyd 28.2 1.6E+02 0.0055 20.9 6.4 68 37-115 47-114 (176)
110 3ce9_A Glycerol dehydrogenase; 27.5 2.2E+02 0.0076 23.1 7.6 88 33-124 21-109 (354)
111 3f8k_A Protein acetyltransfera 27.3 79 0.0027 21.3 4.3 37 30-66 91-127 (160)
112 4evy_A Aminoglycoside N(6')-ac 27.2 75 0.0026 21.9 4.2 37 30-66 113-149 (166)
113 3k94_A Thiamin pyrophosphokina 27.2 41 0.0014 25.8 2.8 10 1-10 1-10 (223)
114 1s3z_A Aminoglycoside 6'-N-ace 26.9 80 0.0028 21.5 4.3 38 30-67 113-150 (165)
115 3obi_A Formyltetrahydrofolate 26.3 48 0.0016 26.5 3.2 92 31-139 100-197 (288)
116 3lod_A Putative acyl-COA N-acy 26.2 74 0.0025 21.5 4.0 37 30-66 92-128 (162)
117 4e0a_A BH1408 protein; structu 26.0 83 0.0028 21.2 4.2 38 30-67 106-143 (164)
118 3ihk_A Thiamin pyrophosphokina 25.5 1.4E+02 0.0047 22.6 5.6 93 2-112 3-98 (218)
119 2bei_A Diamine acetyltransfera 25.5 83 0.0029 22.0 4.2 36 30-65 106-141 (170)
120 3lou_A Formyltetrahydrofolate 25.5 1E+02 0.0034 24.7 4.9 91 32-139 107-202 (292)
121 3abq_B Ethanolamine ammonia-ly 24.4 81 0.0028 25.3 4.0 57 30-91 189-250 (306)
122 3n0v_A Formyltetrahydrofolate 24.4 61 0.0021 25.9 3.5 92 31-139 101-197 (286)
123 2p9j_A Hypothetical protein AQ 24.3 1.8E+02 0.006 20.0 6.8 71 35-115 42-112 (162)
124 1mk4_A Hypothetical protein YQ 23.9 91 0.0031 20.9 4.1 37 30-66 86-122 (157)
125 3gyb_A Transcriptional regulat 23.8 2E+02 0.0067 21.8 6.4 32 27-58 99-130 (280)
126 3rmj_A 2-isopropylmalate synth 23.6 3.1E+02 0.011 22.6 7.8 98 30-129 85-199 (370)
127 2oh1_A Acetyltransferase, GNAT 23.6 95 0.0032 21.4 4.2 37 30-66 121-157 (179)
128 1lbq_A Ferrochelatase; rossman 23.4 2E+02 0.0067 23.8 6.5 25 30-54 107-131 (362)
129 2fia_A Acetyltransferase; stru 23.3 91 0.0031 20.9 4.0 37 30-66 93-129 (162)
130 2cy2_A TTHA1209, probable acet 23.3 98 0.0033 20.9 4.2 38 30-67 106-143 (174)
131 3d8p_A Acetyltransferase of GN 23.2 1E+02 0.0036 20.6 4.3 37 30-66 96-132 (163)
132 1tiq_A Protease synthase and s 22.9 99 0.0034 21.7 4.2 37 30-66 108-144 (180)
133 2fy7_A Beta-1,4-galactosyltran 22.4 2.9E+02 0.0098 21.7 7.6 66 49-117 69-145 (287)
134 3dr6_A YNCA; acetyltransferase 22.3 1.1E+02 0.0036 20.7 4.2 38 30-67 100-137 (174)
135 3fxa_A SIS domain protein; str 22.0 2.2E+02 0.0074 20.7 6.0 96 31-136 31-126 (201)
136 2zu9_A Mannosyl-3-phosphoglyce 21.9 1.5E+02 0.0051 24.9 5.4 38 84-124 143-183 (394)
137 2fe7_A Probable N-acetyltransf 21.8 1.1E+02 0.0038 20.6 4.2 38 30-67 106-143 (166)
138 3tzt_A Glycosyl transferase fa 21.7 2.9E+02 0.0098 21.5 9.5 21 104-124 103-123 (276)
139 1u6m_A Acetyltransferase, GNAT 21.6 75 0.0025 22.9 3.3 37 30-66 130-166 (199)
140 2ae6_A Acetyltransferase, GNAT 21.5 96 0.0033 21.4 3.8 37 30-66 99-135 (166)
141 3g8w_A Lactococcal prophage PS 21.5 1E+02 0.0036 20.9 4.0 37 30-66 99-135 (169)
142 3nkl_A UDP-D-quinovosamine 4-d 21.5 1.6E+02 0.0053 19.9 4.9 52 28-80 46-100 (141)
143 2xhz_A KDSD, YRBH, arabinose 5 21.2 2.3E+02 0.0077 20.1 8.4 94 33-136 37-130 (183)
144 3n07_A 3-deoxy-D-manno-octulos 20.8 2.5E+02 0.0085 20.5 6.4 69 37-115 60-128 (195)
145 3pp9_A Putative streptothricin 20.7 1.2E+02 0.0039 21.3 4.2 38 30-67 118-155 (187)
146 2r1i_A GCN5-related N-acetyltr 20.6 1.1E+02 0.0038 20.7 4.0 37 30-66 115-151 (172)
147 1qsm_A HPA2 histone acetyltran 20.4 98 0.0033 20.4 3.6 37 30-66 101-137 (152)
148 1y9k_A IAA acetyltransferase; 20.3 1.3E+02 0.0043 20.4 4.2 37 30-66 79-115 (157)
No 1
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=1.1e-40 Score=275.57 Aligned_cols=230 Identities=22% Similarity=0.372 Sum_probs=197.4
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhh-----------
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEK----------- 69 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~----------- 69 (256)
|+|||||||.|+||+|+|..+||+|+|++|+|||+|+++.+.++|+++|+|++++..+.+.+++.+...
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~ 82 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKE 82 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CCHH
T ss_pred eEEEEECCcCCcccCccccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhcccch
Confidence 689999999999999999999999999999999999999999999999999999998999888764210
Q ss_pred ---------ccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccc-----hHHHHHHHHhcCCceEEE
Q 046608 70 ---------KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-----LKQMIEFHRGHGGEASIM 135 (256)
Q Consensus 70 ---------~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~-----~~~~~~~~~~~~~~~~i~ 135 (256)
..++.+.+..+..+.|+++++..+++.++.+ +|+|++||++++.+ ++++++.+.+.++ +++.
T Consensus 83 ~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~~---~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~v~ 158 (281)
T 3juk_A 83 NALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNE---PFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SIVA 158 (281)
T ss_dssp HHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSS---CEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CEEE
T ss_pred hhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCCC---CEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CEEE
Confidence 0246777777888899999999999999754 79999999988877 9999999887776 5666
Q ss_pred EEec--CCCcCceeEEEcC--CCC--eEeEEeecCC--CCCCCeEEEEEEEeCHhhHHhcccC------CCCcchhhHHH
Q 046608 136 VTKV--DEPSKYGVVVMEE--TMG--KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELK------PTSIEKEVFPE 201 (256)
Q Consensus 136 ~~~~--~~~~~~~~v~~~~--~~~--~v~~~~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~------~~~~~~~~~~~ 201 (256)
+... .++..||++..++ + + +|.++.|||. ...++++++|+|+|++++|+.+... ...+ .++++.
T Consensus 159 ~~~~~~~~~~~~g~v~~~~~~~-g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~~~~e~~l-~d~i~~ 236 (281)
T 3juk_A 159 IEEVALEEVSKYGVIRGEWLEE-GVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQI-TDALRT 236 (281)
T ss_dssp EEECCTTTGGGSEEEEEEEEET-TEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCCGGGSCCH-HHHHHH
T ss_pred EEEechhhcccCCEEEeccCCC-CceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCCCCCceeH-HHHHHH
Confidence 6555 5678899999886 6 7 9999999997 3456799999999999999887642 2233 788999
Q ss_pred HHhcCcEEEEEeCceEEecCCHHHHHHHHHHHHhh
Q 046608 202 IAVENKLFAMVLPGFWMDIGQPKDYITGLRLYLDF 236 (256)
Q Consensus 202 l~~~~~v~~~~~~~~~~di~t~~d~~~a~~~~~~~ 236 (256)
++..+++.++.++|+|+|||||+||.+|++.+++.
T Consensus 237 l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 237 QAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp HHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred HHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99888999999999999999999999999988765
No 2
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=8.2e-40 Score=268.61 Aligned_cols=230 Identities=25% Similarity=0.369 Sum_probs=200.3
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCC-hHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQ-PEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~-~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|+|||||||.|+||+|+|...||+|+|++|+|||+|+++.+.++|+++|+|++++. .+.+.+++... ..+++.+.+..
T Consensus 25 m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~-~~~~~~i~~~~ 103 (269)
T 4ecm_A 25 MKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSG-QEFGVSFTYRV 103 (269)
T ss_dssp EEEEEECCSCCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEEEEE
T ss_pred cEEEEECCCCccccccccCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhc-cccCceEEEee
Confidence 68999999999999999999999999999999999999999999999999999875 46777777642 33467787777
Q ss_pred cCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEeE
Q 046608 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVEK 159 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~ 159 (256)
+..+.|+++++..+++.++.+ +|++++||+++..++.++++.+.++++++++++.+..++..|+++..++ ++|..
T Consensus 104 ~~~~~G~~~al~~a~~~~~~~---~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~--g~v~~ 178 (269)
T 4ecm_A 104 QDKAGGIAQALGLCEDFVGND---RMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVDDPERFGVANIQN--RKIIE 178 (269)
T ss_dssp CSSCCCHHHHHHTTHHHHTTS---EEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECSCGGGSEEEEEET--TEEEE
T ss_pred CCccCcHHHHHHHHHHhcCCC---cEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECCCCCCceEEEEcC--CEEEE
Confidence 778899999999999998744 8999999999988899999999988889999998888889999999884 89999
Q ss_pred EeecCCCCCCCeEEEEEEEeCHhhHHhcccC-----CCCcchhhHHHHHhcCcEEEEEeCceEEecCCHHHHHHHHHHHH
Q 046608 160 FVEKPKNFVGNKINAGIYLLNPSVLDRIELK-----PTSIEKEVFPEIAVENKLFAMVLPGFWMDIGQPKDYITGLRLYL 234 (256)
Q Consensus 160 ~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~-----~~~~~~~~~~~l~~~~~v~~~~~~~~~~di~t~~d~~~a~~~~~ 234 (256)
+.|||....+.++++|+|+|++++|+.+.+. ......++++.++..+++.++..+++|.|||||+||.+|++.++
T Consensus 179 ~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~ 258 (269)
T 4ecm_A 179 IEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALAR 258 (269)
T ss_dssp EEESCSSCSCSEEEEEEEEECTTHHHHHTSCCBCTTSCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTT
T ss_pred EEECCCCCCCcEEEEEEEEECHHHHHhhhhcCCCCCCeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHH
Confidence 9999977777899999999999999877532 11223688999998889999999999999999999999998765
Q ss_pred hh
Q 046608 235 DF 236 (256)
Q Consensus 235 ~~ 236 (256)
+.
T Consensus 259 ~~ 260 (269)
T 4ecm_A 259 DI 260 (269)
T ss_dssp TC
T ss_pred hc
Confidence 43
No 3
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=1.6e-37 Score=259.20 Aligned_cols=230 Identities=26% Similarity=0.349 Sum_probs=192.1
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhh-----------
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEK----------- 69 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~----------- 69 (256)
|++||||||.|+||+|+|..+||+|+|++|+|||+|+++.+..+|+++|+|++++..+.+.+++.....
T Consensus 9 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~ 88 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKR 88 (302)
T ss_dssp CEEEEECCSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC----C
T ss_pred cEEEEECCcCcccCCccccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhccch
Confidence 789999999999999999999999999999999999999999999999999999888888888764110
Q ss_pred ----------ccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc-----c---chHHHHHHHHhcCCc
Q 046608 70 ----------KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE-----Y---PLKQMIEFHRGHGGE 131 (256)
Q Consensus 70 ----------~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~-----~---~~~~~~~~~~~~~~~ 131 (256)
..++++.+..+..+.|+++++..+++.++.+ +|+|++||++++ . +++++++.|.+.++
T Consensus 89 ~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~~---~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~- 164 (302)
T 2e3d_A 89 QLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDE---PVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH- 164 (302)
T ss_dssp HHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSS---CEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-
T ss_pred hhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCCC---cEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-
Confidence 1256666667778899999999999999654 799999999876 2 69999998887766
Q ss_pred eEEEEEecCCCcCceeEEEc----CCCC---eEeEEeecCC--CCCCCeEEEEEEEeCHhhHHhcccCC-----CCcchh
Q 046608 132 ASIMVTKVDEPSKYGVVVME----ETMG---KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKP-----TSIEKE 197 (256)
Q Consensus 132 ~~i~~~~~~~~~~~~~v~~~----~~~~---~v~~~~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~-----~~~~~~ 197 (256)
+++.+.+..++..|+++..+ ++ + +|..+.|||. ...+.++++|+|+|++++++.+.... .....+
T Consensus 165 ~~i~~~~~~~~~~yg~v~~~~~~~~~-g~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~~l~d 243 (302)
T 2e3d_A 165 SQIMVEPVADVTAYGVVDCKGVELAP-GESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTD 243 (302)
T ss_dssp EEEEEEECSCGGGSEEEECTTCCCCT-TCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCCC----CCCHHH
T ss_pred cEEEEEEccCCCCccEEEecccccCC-CCceeEEEEEECCCCCccccceEEEEEEEECHHHHHHHHhhCCCCCCceehHH
Confidence 67777777778899999874 44 6 8999999986 34467999999999999998875421 122367
Q ss_pred hHHHHHhcCcEEEEEeCceEEecCCHHHHHHHHHHHHh
Q 046608 198 VFPEIAVENKLFAMVLPGFWMDIGQPKDYITGLRLYLD 235 (256)
Q Consensus 198 ~~~~l~~~~~v~~~~~~~~~~di~t~~d~~~a~~~~~~ 235 (256)
+++.+++.+++.++.++++|.|||||+||.+|+..++.
T Consensus 244 ~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~ 281 (302)
T 2e3d_A 244 AIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGI 281 (302)
T ss_dssp HHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHh
Confidence 88888877899999999999999999999999966654
No 4
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=2.1e-37 Score=252.85 Aligned_cols=228 Identities=30% Similarity=0.563 Sum_probs=181.7
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhc-cCcEE----
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKK-LEIKI---- 75 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~-~~~~v---- 75 (256)
|+|||||||.|+||+|+|...||+|+|++|+|||+|+++.+.++|+++|+|++++..+.+.+++.++... .++.+
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 82 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAE 82 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEGGG
T ss_pred cEEEEECCCCcccCCCccCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccccc
Confidence 6899999999999999999999999999999999999999999999999999999888898888764210 02222
Q ss_pred ---------------EeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccchHHHHHHHHhcCCceEEEEEecC
Q 046608 76 ---------------TCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGHGGEASIMVTKVD 140 (256)
Q Consensus 76 ---------------~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 140 (256)
.+..+....|+++++..+++.+..++ +|++++||++++.++.++++.+.++++++++.. ..
T Consensus 83 ~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~~--~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~--~~ 158 (259)
T 1tzf_A 83 NRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDDE--AFLFTYGDGVADLDIKATIDFHKAHGKKATLTA--TF 158 (259)
T ss_dssp TEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTSS--CEEEEETTEEECCCHHHHHHHHHHHCCSEEEEE--EC
T ss_pred cceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCCC--cEEEEECCEecccCHHHHHHHHHHhCCeEEEEE--ec
Confidence 11223456899999999999984322 799999999988889999999887777766543 34
Q ss_pred CCcCceeEEEcCCCCeEeEEeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcCcEEEEEeCceEEec
Q 046608 141 EPSKYGVVVMEETMGKVEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVENKLFAMVLPGFWMDI 220 (256)
Q Consensus 141 ~~~~~~~v~~~~~~~~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~di 220 (256)
.+..|+++..+ + ++|..+.|||... ..++++|+|+|++++|+.+......++.++++.+++.+++.++.++++|.||
T Consensus 159 ~~~~~g~v~~~-~-g~v~~~~ekp~~~-~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI 235 (259)
T 1tzf_A 159 PPGRFGALDIQ-A-GQVRSFQEKPKGD-GAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPM 235 (259)
T ss_dssp CCCCSEEEEEE-T-TEEEEEEESCSCC-SCCEECCCEEECGGGGGGCCSTTCCTTTHHHHHHHHTTCEEEEEECSCEEEC
T ss_pred CCCCccEEEEc-C-CEEEEEEecCCCC-CceEEEEEEEeCHHHHHhhcccccccHHHHHHHHHHcCCEEEEEeCcEEEeC
Confidence 56789999888 5 8999999998643 4689999999999999887654455667888988888899999999999999
Q ss_pred CCHHHHHHHHHHHHh
Q 046608 221 GQPKDYITGLRLYLD 235 (256)
Q Consensus 221 ~t~~d~~~a~~~~~~ 235 (256)
|||+||.+|++.+.+
T Consensus 236 ~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 236 DTLRDKVYLEGLWEK 250 (259)
T ss_dssp CSHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999987754
No 5
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=100.00 E-value=4.3e-37 Score=255.06 Aligned_cols=230 Identities=23% Similarity=0.355 Sum_probs=192.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEcc-CChHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~-~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+..+|+++|+|+++ +..+.+.+++.+. +++++++.+..
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i~~~~ 82 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDG-SEFGIQLEYAE 82 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEEEEE
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcc-cccCceEEEec
Confidence 899999999999999999999999999999999999999999999999999886 5667788888652 23467777777
Q ss_pred cCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
+..+.|+++++..+++.++.+ +++++.||+++ +.++.++++.+.+...++++++.+..++..||++..|++ ++|.
T Consensus 83 ~~~~~G~~~al~~a~~~i~~~---~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~yg~v~~d~~-g~v~ 158 (296)
T 1mc3_A 83 QPSPDGLAQAFIIGETFLNGE---PSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDN-FRAI 158 (296)
T ss_dssp CSSCCCSTHHHHHTHHHHTTS---CEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECSCCSSSBBCEEETT-EEEE
T ss_pred cCCCCCHHHHHHHHHHHhCCC---CEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECCCcccCCEEEECCC-CcEE
Confidence 777899999999999999754 68888899955 567999999887666778888888888889999999987 8999
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcccC-----CCCcchhhHHHHHhcCcEEEEEeC-c-eEEecCCHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELK-----PTSIEKEVFPEIAVENKLFAMVLP-G-FWMDIGQPKDYITGLR 231 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~-----~~~~~~~~~~~l~~~~~v~~~~~~-~-~~~di~t~~d~~~a~~ 231 (256)
.+.|||..+.++++++|+|+|++++++.+..- ......++++.+++.+++.++.+. + .|.|||||+||.+|+.
T Consensus 159 ~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~ 238 (296)
T 1mc3_A 159 SLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEAST 238 (296)
T ss_dssp ECCBSCSSCSCSEEEEEEEECCTHHHHHHHSCCCCSSSSCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHH
T ss_pred EEEECCCCCCCCEEEEEEEEEcHHHHHHHHhcCccccCCccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHH
Confidence 99999976777899999999999998876431 111226788888888887777775 6 4999999999999987
Q ss_pred HHHh
Q 046608 232 LYLD 235 (256)
Q Consensus 232 ~~~~ 235 (256)
.+..
T Consensus 239 ~~~~ 242 (296)
T 1mc3_A 239 FVQT 242 (296)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6644
No 6
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=100.00 E-value=9.2e-37 Score=252.96 Aligned_cols=230 Identities=23% Similarity=0.361 Sum_probs=192.0
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEcc-CChHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~-~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+..+|+++|+|+++ +..+.+.+++.+. +++++++.+..
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g-~~~g~~i~~~~ 82 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDG-SQFGVRFSYRV 82 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTSEEEEEE
T ss_pred eEEEEECCCCCCccccccCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhc-cccCceEEEee
Confidence 899999999999999999999999999999999999999999999999999886 5567788888652 23477777777
Q ss_pred cCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
+..+.|++.++..+++.++.+ +++++.||+++ +.++.++++.+.+...++++++.+..++..|+++..|++ ++|.
T Consensus 83 ~~~~~G~~~al~~a~~~i~~~---~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~v~~d~~-g~v~ 158 (295)
T 1lvw_A 83 QEEPRGIADAFIVGKDFIGDS---KVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVRDPRPFGVVEFDSE-GRVI 158 (295)
T ss_dssp CSSCCCGGGHHHHTHHHHTTS---CEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECSCCTTSEEEEECTT-SBEE
T ss_pred CCCCCChHHHHHHHHHHhCCC---cEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECCCcccCCEEEECCC-CcEE
Confidence 777889999999999999754 68888899954 667999999887666778888888888889999999988 8999
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcccC-----CCCcchhhHHHHHhcCcEEEEEeC-c-eEEecCCHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELK-----PTSIEKEVFPEIAVENKLFAMVLP-G-FWMDIGQPKDYITGLR 231 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~-----~~~~~~~~~~~l~~~~~v~~~~~~-~-~~~di~t~~d~~~a~~ 231 (256)
.+.|||..+.++++++|+|+|++++++.+..- ......++++.+++.+++.++.+. + .|.|||||+||.+|+.
T Consensus 159 ~~~ekp~~~~s~~~~~Giy~f~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~ 238 (295)
T 1lvw_A 159 SIEEKPSRPKSNYVVPGLYFYDNQVVEIARRIEPSDRGELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASS 238 (295)
T ss_dssp EEEESCSSCSCSEECCSEEEECTTHHHHHHHCCCCTTSCCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHH
T ss_pred EEEECCCCCCCCEEEEEeEEEcHHHHHHHHhcCCcccCceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHH
Confidence 99999976677899999999999998876421 111126788888888887777775 6 5999999999999987
Q ss_pred HHHh
Q 046608 232 LYLD 235 (256)
Q Consensus 232 ~~~~ 235 (256)
.+..
T Consensus 239 ~~~~ 242 (295)
T 1lvw_A 239 FIET 242 (295)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 7
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=100.00 E-value=1.4e-36 Score=251.78 Aligned_cols=230 Identities=22% Similarity=0.344 Sum_probs=192.3
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEcc-CChHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~-~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+..+|+++|+|++. ++.+.+.+++.+. +++++++.+..
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i~~~~ 81 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDG-SNWGLDLQYAV 81 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS-GGGTCEEEEEE
T ss_pred ceEEEECCCCCCcCccccCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcc-cccCceEEEee
Confidence 579999999999999999999999999999999999999999999999998874 4567788888752 23477777777
Q ss_pred cCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
+..+.|+++++..+++.++.+ +++++.||+++ +.++.++++.+.+.+.++++++.+..++..|+++..|++ ++|.
T Consensus 82 ~~~~~G~~~al~~a~~~i~~~---~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~v~~d~~-g~v~ 157 (293)
T 1fxo_A 82 QPSPDGLAQAFLIGESFIGND---LSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGVVEFDQG-GKAI 157 (293)
T ss_dssp CSSCCCGGGHHHHTHHHHTTS---EEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECSCGGGSEEEEECTT-SCEE
T ss_pred CCCCCCHHHHHHHHHHHhCCC---CEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECCCcccCcEEEECCC-CcEE
Confidence 778899999999999999754 78888899965 567999999887667778888888888889999999987 8999
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcccC-----CCCcchhhHHHHHhcCcEEEEEeC-c-eEEecCCHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELK-----PTSIEKEVFPEIAVENKLFAMVLP-G-FWMDIGQPKDYITGLR 231 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~-----~~~~~~~~~~~l~~~~~v~~~~~~-~-~~~di~t~~d~~~a~~ 231 (256)
.+.|||..+.++++++|+|+|++++++.+..- ......++++.+++.+++.++... + .|.|||||+||.+|+.
T Consensus 158 ~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~ 237 (293)
T 1fxo_A 158 SLEEKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQ 237 (293)
T ss_dssp EEEESCSSCSSSEEEEEEEEECTTHHHHHHHCCCCTTSSCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHH
T ss_pred EEEECCCCCCCCeEEEEEEEEcHHHHHHHHhcCcccCCceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHH
Confidence 99999976677899999999999998876421 111226788888888888777775 6 5999999999999987
Q ss_pred HHHh
Q 046608 232 LYLD 235 (256)
Q Consensus 232 ~~~~ 235 (256)
.+..
T Consensus 238 ~~~~ 241 (293)
T 1fxo_A 238 FIAT 241 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 8
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.3e-37 Score=267.02 Aligned_cols=235 Identities=24% Similarity=0.365 Sum_probs=187.2
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCc-chHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh-hhh-----ccCc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANK-PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE-FEK-----KLEI 73 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~-pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~-~~~-----~~~~ 73 (256)
|+|||||||.|+||+|+|...||+|+|++|+ |||+|+++.+.++|+++|+|++++..+.+.+++.+ +.. ..++
T Consensus 13 ~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~v 92 (420)
T 3brk_X 13 AMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFRPERNESF 92 (420)
T ss_dssp EEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCCCGGGTCEE
T ss_pred eEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhccccccccCCE
Confidence 5799999999999999999999999999999 99999999999999999999999988888888875 210 0013
Q ss_pred EEEeeccC--Cc---CCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccchHHHHHHHHhcCCceEEEEEec--CCCcCce
Q 046608 74 KITCSQET--EP---LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGHGGEASIMVTKV--DEPSKYG 146 (256)
Q Consensus 74 ~v~~~~~~--~~---~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~ 146 (256)
.+....+. .+ .|++++++.+++.+...+.++|++++||++++.++.++++.+.++++++++++.+. .++..|+
T Consensus 93 ~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g 172 (420)
T 3brk_X 93 DILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFG 172 (420)
T ss_dssp EEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSE
T ss_pred EEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCccccCccc
Confidence 33322221 12 79999999999988631112799999999988889999999988888888888765 4567899
Q ss_pred eEEEcCCCCeEeEEeecCCCCC-------CCeEEEEEEEeCHhhHH-hccc------CCCCcchhhHHHHHhcCcEEEEE
Q 046608 147 VVVMEETMGKVEKFVEKPKNFV-------GNKINAGIYLLNPSVLD-RIEL------KPTSIEKEVFPEIAVENKLFAMV 212 (256)
Q Consensus 147 ~v~~~~~~~~v~~~~ek~~~~~-------~~~~~~Giy~~~~~~~~-~l~~------~~~~~~~~~~~~l~~~~~v~~~~ 212 (256)
++..+++ ++|..+.|||.... +.++++|+|+|++++|. .+.+ +...+..++++.+++.+++.++.
T Consensus 173 ~v~~d~~-g~v~~~~ekp~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~l~~li~~g~v~~~~ 251 (420)
T 3brk_X 173 VMHVNEK-DEIIDFIEKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRDFGKDIIPYIVEHGKAVAHR 251 (420)
T ss_dssp EEEECTT-SBEEEEEESCSSCCCBTTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC----------CTTHHHHHSCEEEEE
T ss_pred EEEECCC-CcEEEeEeCCCccccccccccceEEeeeeEEEeHHHHHHHHHHhcccCCccccchHHHHHHHhhhCcEEEEE
Confidence 9999887 89999999986543 56899999999999874 4432 12345568888888888999999
Q ss_pred e-----------CceEEecCCHHHHHHHHHHHHhh
Q 046608 213 L-----------PGFWMDIGQPKDYITGLRLYLDF 236 (256)
Q Consensus 213 ~-----------~~~~~di~t~~d~~~a~~~~~~~ 236 (256)
+ +++|.|||||+||.+|++.++..
T Consensus 252 ~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~ 286 (420)
T 3brk_X 252 FADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDV 286 (420)
T ss_dssp HHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSS
T ss_pred eccccccccccCCCEEEECCCHHHHHHHHHHHhCC
Confidence 9 78999999999999999988764
No 9
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=2.6e-37 Score=257.26 Aligned_cols=231 Identities=23% Similarity=0.344 Sum_probs=171.8
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhh-----------
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEK----------- 69 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~----------- 69 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+.++|+++|+|++++..+.+.+++.....
T Consensus 15 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~ 94 (297)
T 2ux8_A 15 RKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAARGKS 94 (297)
T ss_dssp CEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTTTCC
T ss_pred cEEEEECCCCccccCccccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhccch
Confidence 789999999999999999999999999999999999999999999999999999888888888753100
Q ss_pred --------ccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc---cchHHHHHHHHhcCCceEEEEEe
Q 046608 70 --------KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE---YPLKQMIEFHRGHGGEASIMVTK 138 (256)
Q Consensus 70 --------~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~---~~~~~~~~~~~~~~~~~~i~~~~ 138 (256)
..++.+.+..+....|+++++..+++.++.+ +|+|++||++++ .+++++++.+.+.+. .++.+.+
T Consensus 95 ~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~~---~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~ 170 (297)
T 2ux8_A 95 LDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDE---PFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAEE 170 (297)
T ss_dssp GGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSS---CEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC-
T ss_pred hhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCCC---cEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEEe
Confidence 0244555556677889999999999998644 799999999876 458999998877665 4555544
Q ss_pred c--CCCcCceeEEEcC--CCC--eEeEEeecCC--CCCCCeEEEEEEEeCHhhHHhcccCC-----CCcchhhHHHHHhc
Q 046608 139 V--DEPSKYGVVVMEE--TMG--KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKP-----TSIEKEVFPEIAVE 205 (256)
Q Consensus 139 ~--~~~~~~~~v~~~~--~~~--~v~~~~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~-----~~~~~~~~~~l~~~ 205 (256)
. .++..|+++..++ + + +|..+.|||. ...+.++++|+|+|++++++.+.... .....++++.+++.
T Consensus 171 ~~~~~~~~yg~v~~~~~~~-~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~~l~d~i~~l~~~ 249 (297)
T 2ux8_A 171 VPDDQTHRYGIITPGTQDG-VLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGAGGEIQLTDAMQRMIGD 249 (297)
T ss_dssp ----------CCCCCCBCS-SEEEC--------------CCCEEEEEEECTHHHHHHHHTC--------CCTTGGGGTTT
T ss_pred cCcccCCCCCeEEecccCC-CceeEEEEEECCCCCCCCccEEEEEEEEECHHHHHHHHhhCCCCCCeeEHHHHHHHHHhc
Confidence 4 4567798887653 3 5 8999999985 33456899999999999988775321 11126788888877
Q ss_pred CcEEEEEeCceEEecCCHHHHHHHHHHHHhh
Q 046608 206 NKLFAMVLPGFWMDIGQPKDYITGLRLYLDF 236 (256)
Q Consensus 206 ~~v~~~~~~~~~~di~t~~d~~~a~~~~~~~ 236 (256)
+++.++.++++|.|||||+||.+|+..++..
T Consensus 250 ~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~ 280 (297)
T 2ux8_A 250 QPFHGVTFQGTRYDCGDKAGFIQANLAVALS 280 (297)
T ss_dssp SCEEEEECSSEEEETTSHHHHHHHHHHHHHH
T ss_pred CCEEEEEecceEEeCCCHHHHHHHHHHHHhc
Confidence 8999999999999999999999999877653
No 10
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=1.6e-36 Score=266.24 Aligned_cols=236 Identities=19% Similarity=0.326 Sum_probs=186.1
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCc-chHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhh-hcc-------
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANK-PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFE-KKL------- 71 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~-pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~-~~~------- 71 (256)
|+|||||||.|+||+|+|...||+|+|++|+ |||+|+++.+.++|+++|+|++++..+.+.+++.+.. ..+
T Consensus 21 ~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 100 (451)
T 1yp2_A 21 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 100 (451)
T ss_dssp EEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC--------CC
T ss_pred eEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhhhcccccccccC
Confidence 6899999999999999999999999999999 9999999999999999999999998888888886421 011
Q ss_pred CcEEEeeccC-----CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccchHHHHHHHHhcCCceEEEEEecC--CCcC
Q 046608 72 EIKITCSQET-----EPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHRGHGGEASIMVTKVD--EPSK 144 (256)
Q Consensus 72 ~~~v~~~~~~-----~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~ 144 (256)
.+++....+. ...|++++++.+++.+.....++|++++||++++.++.++++.|.++++++++++.+.. ++..
T Consensus 101 ~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~ 180 (451)
T 1yp2_A 101 FVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATA 180 (451)
T ss_dssp EEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTT
T ss_pred cEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhhccc
Confidence 1334332222 24799999999999986321238999999999888899999999888888888877664 5678
Q ss_pred ceeEEEcCCCCeEeEEeecCCCC---------------------CCCeEEEEEEEeCHhhHH-hccc---CCCCcchhhH
Q 046608 145 YGVVVMEETMGKVEKFVEKPKNF---------------------VGNKINAGIYLLNPSVLD-RIEL---KPTSIEKEVF 199 (256)
Q Consensus 145 ~~~v~~~~~~~~v~~~~ek~~~~---------------------~~~~~~~Giy~~~~~~~~-~l~~---~~~~~~~~~~ 199 (256)
|+++..|++ ++|..+.|||... .+.++++|+|+|++++|. .+.. ....+..+++
T Consensus 181 ~g~v~~d~~-~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l 259 (451)
T 1yp2_A 181 FGLMKIDEE-GRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVI 259 (451)
T ss_dssp SEEEEECTT-SBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTCCCTTTTHH
T ss_pred CCEEEECCC-CCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccccchHhhHH
Confidence 999999987 8999999998632 245899999999999875 4433 2345556888
Q ss_pred HHHHhc-CcEEEEEeCceEEecCCHHHHHHHHHHHHhhh
Q 046608 200 PEIAVE-NKLFAMVLPGFWMDIGQPKDYITGLRLYLDFL 237 (256)
Q Consensus 200 ~~l~~~-~~v~~~~~~~~~~di~t~~d~~~a~~~~~~~~ 237 (256)
+.++.+ .++.++..+++|.|||||+||.+|++.++.+.
T Consensus 260 ~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~ 298 (451)
T 1yp2_A 260 PGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 298 (451)
T ss_dssp HHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSS
T ss_pred HHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhccc
Confidence 888887 48999999999999999999999999887654
No 11
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.7e-36 Score=252.63 Aligned_cols=226 Identities=16% Similarity=0.206 Sum_probs=188.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCcccee--CCcchHHHHHHHHHHcCCCEEEEEccCC-hHHHHHHHHhhhhccCcEEEe
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDF--ANKPMILHQIEALKAVGVTEVVLAINYQ-PEVMLNFLKEFEKKLEIKITC 77 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i--~g~pli~~~l~~l~~~~i~~i~vv~~~~-~~~i~~~~~~~~~~~~~~v~~ 77 (256)
|++||||||.|+||+| ||+|+|+ +|+|||+|+++.+.++|+++|+|++++. .+.+.+++.+... .+..+.+
T Consensus 6 ~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~-~~~~i~~ 79 (303)
T 3pnn_A 6 PTLFVLAAGMGSRYGS-----LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYE-GRIPVEL 79 (303)
T ss_dssp CEEEEECTTCBCTTSS-----BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHT-TTSCEEE
T ss_pred eEEEEECCCCcccCCC-----CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhc-cCCcEEE
Confidence 5799999999999998 7999999 5999999999999999999999999988 4888888875322 2444555
Q ss_pred eccC---------------CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccc-hHHHHHHHHh---cCCceEEEEEe
Q 046608 78 SQET---------------EPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRG---HGGEASIMVTK 138 (256)
Q Consensus 78 ~~~~---------------~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~---~~~~~~i~~~~ 138 (256)
..+. ++.|+++++..+++.++ + +|+|++||++++.+ ++++++.|.+ .+++.++++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~-~---~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 80 VFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR-E---PFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp EECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC-S---CEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred EecccccccccccccccccccCCcHHHHHHHHHhcC-C---CEEEEECCeecCHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 5444 57899999999999993 3 79999999998876 8999998876 56788888888
Q ss_pred cCCC-cCc-----eeEEEcCCCCeEeEEeecCCC-------------------CCCCeEEEEEEEeCHhhHHhccc----
Q 046608 139 VDEP-SKY-----GVVVMEETMGKVEKFVEKPKN-------------------FVGNKINAGIYLLNPSVLDRIEL---- 189 (256)
Q Consensus 139 ~~~~-~~~-----~~v~~~~~~~~v~~~~ek~~~-------------------~~~~~~~~Giy~~~~~~~~~l~~---- 189 (256)
.+++ +.| |.+.+|++ ++|+++.|||.. ..++++++|+|+|++++|+.+..
T Consensus 156 ~~~~~~~~g~~~~G~v~~d~~-g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l~~~~~~ 234 (303)
T 3pnn_A 156 VGNTLSESGGVSRGVCQVDEK-HLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFDYSEELFIN 234 (303)
T ss_dssp GGGSCBTTBCEEEEEEEECTT-SBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHHHHHHHHHH
T ss_pred CCCccCccCceeeeeEeeCCC-CcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHHHHHHHHHHH
Confidence 8777 777 58888877 899999999853 25679999999999999887742
Q ss_pred ---------CCCCcchhhHHHHHhcC--cEEEEEeCceEEecCCHHHHHHHHHHHHhhh
Q 046608 190 ---------KPTSIEKEVFPEIAVEN--KLFAMVLPGFWMDIGQPKDYITGLRLYLDFL 237 (256)
Q Consensus 190 ---------~~~~~~~~~~~~l~~~~--~v~~~~~~~~~~di~t~~d~~~a~~~~~~~~ 237 (256)
+...+..++++.+++.+ ++.++.++|+|+|||||+||.+|++.+....
T Consensus 235 ~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~~~ 293 (303)
T 3pnn_A 235 FLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRELT 293 (303)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHHHH
T ss_pred HHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHHHH
Confidence 12233478999999888 7999999999999999999999998876654
No 12
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=4.5e-36 Score=252.38 Aligned_cols=231 Identities=23% Similarity=0.347 Sum_probs=186.0
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhh------------
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFE------------ 68 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~------------ 68 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+..+|+++|+|++++..+.+.+++....
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~~~~ 92 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMERGKT 92 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHTTCH
T ss_pred eEEEEECCCCccccCccccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhccchh
Confidence 78999999999999999999999999999999999999999999999999999998888887764310
Q ss_pred -------h-ccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc--cchHHHHHHHHhcCCceEEEEEe
Q 046608 69 -------K-KLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE--YPLKQMIEFHRGHGGEASIMVTK 138 (256)
Q Consensus 69 -------~-~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~~ 138 (256)
. ..++.+.+..+....|+++++..++..+..+ .+.|+|++||++++ .+++++++.+.+.+. .++.+.+
T Consensus 93 ~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~-~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~~~~ 170 (323)
T 2pa4_A 93 DQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDD-EDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLCAVE 170 (323)
T ss_dssp HHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSS-CCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEEEEE
T ss_pred hhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCC-CCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEEEEE
Confidence 0 0245565566677889999999999988643 11399999999886 458999998877665 4555544
Q ss_pred c--CCCcCceeEEEc----CCCC--eEeEEeecCC--CCCCCeEEEEEEEeCHhhHHhcccCC-----CCcchhhHHHHH
Q 046608 139 V--DEPSKYGVVVME----ETMG--KVEKFVEKPK--NFVGNKINAGIYLLNPSVLDRIELKP-----TSIEKEVFPEIA 203 (256)
Q Consensus 139 ~--~~~~~~~~v~~~----~~~~--~v~~~~ek~~--~~~~~~~~~Giy~~~~~~~~~l~~~~-----~~~~~~~~~~l~ 203 (256)
. .+++.|+++..+ ++ + +|..+.|||. ...+.++++|+|+|++++|..+.... .....++++.++
T Consensus 171 ~~~~~~~~yg~v~~d~~~~~~-~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~ 249 (323)
T 2pa4_A 171 VSEADVSKYGIFEIEADTKDS-DVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQLTDAIDLLI 249 (323)
T ss_dssp CCGGGGGGSEEEEEEECCSST-TEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHH
T ss_pred ecccccCCccEEEeCCcccCC-CceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHH
Confidence 4 356789999877 44 4 8999999985 34456899999999999988875321 111268888888
Q ss_pred hc-CcEEEEEeCceEEecCCHHHHHHHHHHHH
Q 046608 204 VE-NKLFAMVLPGFWMDIGQPKDYITGLRLYL 234 (256)
Q Consensus 204 ~~-~~v~~~~~~~~~~di~t~~d~~~a~~~~~ 234 (256)
+. .++.++.++++|+|||||+||.+|+..++
T Consensus 250 ~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~ 281 (323)
T 2pa4_A 250 DEGHPVHIVIHQGKRHDLGNPGGYIPACVDFG 281 (323)
T ss_dssp HTTCCEEEEECCSEEEECSSHHHHHHHHHHHH
T ss_pred HcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHh
Confidence 87 58999999999999999999999997765
No 13
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=100.00 E-value=1.1e-36 Score=247.84 Aligned_cols=218 Identities=17% Similarity=0.262 Sum_probs=172.7
Q ss_pred EEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHH-cCCCEEEEEccCChHHHHHHHHhhhhccCc--EEEeec
Q 046608 3 ALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKA-VGVTEVVLAINYQPEVMLNFLKEFEKKLEI--KITCSQ 79 (256)
Q Consensus 3 aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~-~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~--~v~~~~ 79 (256)
+||||||.||||+|+|..+||+|+|++|+|||+|+|+.+.+ +|++++++++++..+ +.+++.+....+++ ...+..
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAEL 80 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEE
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEe
Confidence 89999999999999999999999999999999999999999 799999999998765 54555443222221 123345
Q ss_pred cCCcCCCcHHHHHHHhhhc-----CCCCCcEEEEeCCeec-ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCC
Q 046608 80 ETEPLGTAGPLALARDKLI-----DDSGEPFFVLNSDVIS-EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEET 153 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~-----~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~ 153 (256)
+..+.|+++|+..|++.+. .++ +|+|++||+++ +.++.++ ...+++++++...+++ .||++..|++
T Consensus 81 ~~~~~Gt~~av~~a~~~l~~~~~~~~~--~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~p-~yG~v~~d~~ 152 (255)
T 4evw_A 81 HTETRGQAETVTLGLEELAKQGVDYQG--SITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGGD-NWSFAKPEHA 152 (255)
T ss_dssp SSCCSSHHHHHHHHHHHHHHTTCCCCS--CEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCSS-CSCEEEESST
T ss_pred CCCCCCHHHHHHHHHHHHhhcccCCCC--cEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCCC-ceeEEEECCC
Confidence 6788999999999999993 222 79999999988 4455543 2456788888888775 8999999987
Q ss_pred CC--eEeEEeecCCCCCCCeEEEEEEEeCHhh-HH-----hccc------CCCCcchhhHHHHHhcC-cEEEEEeC-ceE
Q 046608 154 MG--KVEKFVEKPKNFVGNKINAGIYLLNPSV-LD-----RIEL------KPTSIEKEVFPEIAVEN-KLFAMVLP-GFW 217 (256)
Q Consensus 154 ~~--~v~~~~ek~~~~~~~~~~~Giy~~~~~~-~~-----~l~~------~~~~~~~~~~~~l~~~~-~v~~~~~~-~~~ 217 (256)
+ +|+++.||+. .++++++|+|+|++.. |. .+.+ +...+..++++.+++.| ++.++.++ ++|
T Consensus 153 -g~~~V~~i~EK~~--~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w 229 (255)
T 4evw_A 153 -GSTKVIQTAEKNP--ISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERGELYIAPLYNELIQKGLNIHYHLIARHEV 229 (255)
T ss_dssp -TCCBEEEEESSSC--SSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGC
T ss_pred -CCeEEEEEEeccC--ccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCCeEehHHHHHHHHHCCCEEEEEEeccccE
Confidence 7 9999999944 5689999999999852 21 2221 23344579999999887 78899886 899
Q ss_pred EecCCHHHHHHHHHH
Q 046608 218 MDIGQPKDYITGLRL 232 (256)
Q Consensus 218 ~di~t~~d~~~a~~~ 232 (256)
+|||||+||.++++.
T Consensus 230 ~digt~~~l~~~~~~ 244 (255)
T 4evw_A 230 IFCGVPDEYTDFLRQ 244 (255)
T ss_dssp EECCSHHHHHHHHHC
T ss_pred EECCCHHHHHHHHhc
Confidence 999999999999764
No 14
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=1.3e-32 Score=244.36 Aligned_cols=230 Identities=20% Similarity=0.290 Sum_probs=192.7
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.||||+|. .||+|+|++|+|||+|+|+.|.++|+++|+|++++..+.+.+++.+..+.++..+.+..|.
T Consensus 14 ~vvILAaG~GtRm~~~---~pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~q~ 90 (501)
T 3st8_A 14 AVLVLAAGPGTRMRSD---TPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQD 90 (501)
T ss_dssp EEEEEECSCCGGGCCS---SCGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred eEEEECCcCcccCCCC---CCHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 4699999999999995 4999999999999999999999999999999999999999999988666667888888999
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-c-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEeE
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-E-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVEK 159 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~ 159 (256)
++.||++|+.++++.+..+..+.++++.||..+ . ..+..+++.|...+++++++++..++|..||.+..+++ ++|.+
T Consensus 91 ~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~-g~v~~ 169 (501)
T 3st8_A 91 RPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQD-HEVMA 169 (501)
T ss_dssp SCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTT-CCEEE
T ss_pred CCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccc-eeEEe
Confidence 999999999999999977544479999999943 3 44889999999999999999999999999999999998 99999
Q ss_pred EeecCCCC----CCCeEEEEEEEeCHhhHHhccc-------CCCCcchhhHHHHHhcC-cEEEEEeCceE--EecCCHHH
Q 046608 160 FVEKPKNF----VGNKINAGIYLLNPSVLDRIEL-------KPTSIEKEVFPEIAVEN-KLFAMVLPGFW--MDIGQPKD 225 (256)
Q Consensus 160 ~~ek~~~~----~~~~~~~Giy~~~~~~~~~l~~-------~~~~~~~~~~~~l~~~~-~v~~~~~~~~~--~di~t~~d 225 (256)
+.||+... ..+++++|+|+|+++.+..+.. ....+..+++..+...+ .+..+...+.| ..+++..+
T Consensus 170 ivEk~~~~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~ 249 (501)
T 3st8_A 170 IVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQ 249 (501)
T ss_dssp EECGGGCCHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHH
T ss_pred eccccCCChhhccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHH
Confidence 99997643 3568999999999988876532 12344567888887777 56677766644 35677777
Q ss_pred HHHHHHHHHh
Q 046608 226 YITGLRLYLD 235 (256)
Q Consensus 226 ~~~a~~~~~~ 235 (256)
+..+...+..
T Consensus 250 l~~~~~~~~~ 259 (501)
T 3st8_A 250 LAELASELNR 259 (501)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 7776655543
No 15
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=100.00 E-value=6.2e-34 Score=237.83 Aligned_cols=226 Identities=20% Similarity=0.281 Sum_probs=152.8
Q ss_pred CeEEEEeCCCCCccccCCC-CCCCcccee-CCcchHHHHHHHHHHcCCCEEEEEccCCh-HHHHHHHHhhhhccCc-EEE
Q 046608 1 MKALILVGGFGTRLRPLTL-SVPKPLVDF-ANKPMILHQIEALKAVGVTEVVLAINYQP-EVMLNFLKEFEKKLEI-KIT 76 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~-~~pK~ll~i-~g~pli~~~l~~l~~~~i~~i~vv~~~~~-~~i~~~~~~~~~~~~~-~v~ 76 (256)
|++||||||.|+||+|+|. ..||+|+|+ +|+|||+|+++++.++ +++|+|++++.. +.+.+++.+. +++ ++.
T Consensus 5 ~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~---~~~~~~~ 80 (308)
T 2qh5_A 5 IKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE---IKNKSVG 80 (308)
T ss_dssp EEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT---CSSCEEE
T ss_pred cEEEEEcCCCCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh---hCCCccE
Confidence 6799999999999999996 799999999 6999999999999999 999999998874 5677777651 244 455
Q ss_pred eeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-ccc-hHHHHHH---HHhcCCceEEEEEecCCCcCceeEEEc
Q 046608 77 CSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EYP-LKQMIEF---HRGHGGEASIMVTKVDEPSKYGVVVME 151 (256)
Q Consensus 77 ~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~~~-~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~v~~~ 151 (256)
+..+..+.|++.++..++..+..+. +|++++||+++ +.+ +.++++. +.+.++++++.+.+...+..||++..+
T Consensus 81 ~i~~~~~~gt~~al~~a~~~l~~~~--~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~i~~d 158 (308)
T 2qh5_A 81 FLLESLSKNTANAIALSALMSDKED--LLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDKPNTEFGYIESP 158 (308)
T ss_dssp EEEESSCCCHHHHHHHHHHTSCTTS--EEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTSEEEECS
T ss_pred EEeCCCCCChHHHHHHHHHHhCCCC--eEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEC
Confidence 5556778899999999999885331 69999999987 555 8888886 556667788887777677889999887
Q ss_pred CCCCeEeEEeecCCCC--------CCCeEEEEEEEeCHhhH-Hhccc---------------C--C----CCc---chhh
Q 046608 152 ETMGKVEKFVEKPKNF--------VGNKINAGIYLLNPSVL-DRIEL---------------K--P----TSI---EKEV 198 (256)
Q Consensus 152 ~~~~~v~~~~ek~~~~--------~~~~~~~Giy~~~~~~~-~~l~~---------------~--~----~~~---~~~~ 198 (256)
++ ++|..+.|||... .+.++++|+|+|+++.| +.+.+ . . ..+ ..++
T Consensus 159 ~~-~~V~~~~Ekp~~~~~~~~~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 237 (308)
T 2qh5_A 159 NG-LDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENAYFFEKKIARLSEKS 237 (308)
T ss_dssp SS-SBCSEEEESCCHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHHGGGCEEECCSSSCEEEECHHH
T ss_pred CC-CEEEEEEECCChHHHHHHhhcCCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHHHHhhccccccccchhhhhhhHHH
Confidence 66 8999999998642 14589999999998775 32211 0 0 111 1243
Q ss_pred HH--------H-HHhc-CcEEEEEeCceEEecCCHHHHHHHHHHH
Q 046608 199 FP--------E-IAVE-NKLFAMVLPGFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 199 ~~--------~-l~~~-~~v~~~~~~~~~~di~t~~d~~~a~~~~ 233 (256)
++ . +++. .++.+++.+++|.|||||+||.+++..-
T Consensus 238 ~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 238 MQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp HHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred HhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 33 2 4554 4899999999999999999999998653
No 16
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=7.2e-33 Score=239.62 Aligned_cols=232 Identities=29% Similarity=0.495 Sum_probs=181.8
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++.+.+++++++++++++. +.+++.+... ++.++ .+
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~--~i~~~--~~ 73 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK--EISIV--TQ 73 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT--TCEEE--EC
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC--cEEEE--eC
Confidence 89999999999999999999999999999999999999999999999999999775 6666654321 35444 34
Q ss_pred CC-cCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc--cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeE
Q 046608 81 TE-PLGTAGPLALARDKLIDDSGEPFFVLNSDVISE--YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKV 157 (256)
Q Consensus 81 ~~-~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v 157 (256)
.+ +.|++.++..+++ .+ +++++.||+++. .+++++++ ..+.++++.+..++..|+++..+++ +++
T Consensus 74 ~~~~~g~~~~l~~~~~---~~---~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~v~~~~~-g~v 141 (401)
T 2ggo_A 74 KDDIKGTGAAILSAKF---ND---EALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVSNPKDYGVLVLDNQ-NNL 141 (401)
T ss_dssp CTTCCBSTTTGGGCCC---SS---EEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECSCCSSSCEEEECTT-SSE
T ss_pred CCCCCChHHHHHHhcc---CC---CEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcCCCcceeEEEECCC-CeE
Confidence 44 6788888887765 22 799999999876 44666665 3567788888888888999988887 899
Q ss_pred eEEeecCCCCCCCeEEEEEEEeCHhhHHhcccC------CCCcchhhHHHHHhc-CcEEEEEeCceEEecCCHHHHHHHH
Q 046608 158 EKFVEKPKNFVGNKINAGIYLLNPSVLDRIELK------PTSIEKEVFPEIAVE-NKLFAMVLPGFWMDIGQPKDYITGL 230 (256)
Q Consensus 158 ~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~------~~~~~~~~~~~l~~~-~~v~~~~~~~~~~di~t~~d~~~a~ 230 (256)
..+.|||..+.+.++++|+|+|++++|+.+... ...+ .++++.+ .. .++..+..++.|.|||||+||.+|+
T Consensus 142 ~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~ 219 (401)
T 2ggo_A 142 SKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISISERGELEL-TDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVN 219 (401)
T ss_dssp EEEECSCSSCSCSEEEEEEEEEETHHHHHHHHSCCCSSSCBCH-HHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHH
T ss_pred EEEEECCCCCCCcEEEEEEEEEcHHHHHHhhhcCcCCCCceEH-HHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHH
Confidence 999999877777899999999999998877421 1222 5777777 54 4888999888999999999999999
Q ss_pred HHHHhhhc-ccCCcccccCceecc
Q 046608 231 RLYLDFLQ-KNSSSKLATGSNIIG 253 (256)
Q Consensus 231 ~~~~~~~~-~~~~~~~~~~~~~~g 253 (256)
+.++.+.. ......+.+++.+.|
T Consensus 220 ~~l~~~~~~~~~~~~i~~~~~i~~ 243 (401)
T 2ggo_A 220 KWALDNLVFSQNLGNVEDNVKIKG 243 (401)
T ss_dssp HHHHHHTCCCEECSEECSSCEEES
T ss_pred HHHHHhcccccccceeCCCCEEcC
Confidence 98887654 222233444444443
No 17
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=100.00 E-value=8.7e-32 Score=218.65 Aligned_cols=221 Identities=18% Similarity=0.177 Sum_probs=173.0
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.|+||+ ||+|++++|+|||+|+++.+..+++++|+|+++ .+.+.+++.++ ++++.+..+.
T Consensus 4 ~aiIlA~G~stRlp------~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~~----g~~v~~~~~~ 71 (252)
T 3oam_A 4 TVVIPARYQSTRLP------GKPLADIGGKPMIQWVYEQAMQAGADRVIIATD--DERVEQAVQAF----GGVVCMTSPN 71 (252)
T ss_dssp EEEEECCCCCSSST------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT----TCEEEECCTT
T ss_pred EEEEecCcCCCCCC------CcceeeECCEEHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHHc----CCEEEEcCCC
Confidence 58999999999993 699999999999999999999999999999994 57777777654 7888877676
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCCcCc-----eeEEEcCCC
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEPSKY-----GVVVMEETM 154 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~v~~~~~~ 154 (256)
...|++. +..++..++..+.+.|+++.||..+ +..+.++++.+.++++++++++.+..++..| +.+..|++
T Consensus 72 ~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~- 149 (252)
T 3oam_A 72 HQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKS- 149 (252)
T ss_dssp CCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTT-
T ss_pred CCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCC-
Confidence 7778876 6667777741112289999999933 5568999999988888899999998887777 89999988
Q ss_pred CeEeEEeecCCC-------------CCCCeEEEEEEEeCHhhHHhcccCC-CCcch----hhHHHHHhcCcEEEEEeCc-
Q 046608 155 GKVEKFVEKPKN-------------FVGNKINAGIYLLNPSVLDRIELKP-TSIEK----EVFPEIAVENKLFAMVLPG- 215 (256)
Q Consensus 155 ~~v~~~~ek~~~-------------~~~~~~~~Giy~~~~~~~~~l~~~~-~~~~~----~~~~~l~~~~~v~~~~~~~- 215 (256)
|++..|+++|-. ....+.++|+|+|++++|+.+.... ..++. +.+..+....++.++..++
T Consensus 150 g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~lr~l~~G~~i~~~~~~~~ 229 (252)
T 3oam_A 150 GYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEA 229 (252)
T ss_dssp SBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEECSSC
T ss_pred CeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHHHHHHHCCCeEEEEEecCC
Confidence 999999988642 2256899999999999999875332 22221 2333333344888887655
Q ss_pred eEEecCCHHHHHHHHHHHHhh
Q 046608 216 FWMDIGQPKDYITGLRLYLDF 236 (256)
Q Consensus 216 ~~~di~t~~d~~~a~~~~~~~ 236 (256)
.|.|||||+||.+|++.+..+
T Consensus 230 ~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 230 PPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp CCCCCCSHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHhh
Confidence 789999999999999877553
No 18
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.98 E-value=8e-31 Score=231.11 Aligned_cols=223 Identities=23% Similarity=0.335 Sum_probs=181.8
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
++||||||.|+||++ ..||+|+|++|+|||+|+++.+.++++++++|++++..+.+.+++.+ ++.++ .+.
T Consensus 13 ~~vIlAaG~g~R~~~---~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~-----~i~~v--~~~ 82 (468)
T 1hm9_A 13 FAIILAAGKGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG-----QTEFV--TQS 82 (468)
T ss_dssp EEEEECCCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS-----SSEEE--ECS
T ss_pred cEEEEcCCCCccCCC---CCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC-----CcEEE--eCC
Confidence 689999999999986 78999999999999999999999999999999999887776665543 34443 355
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe--ecccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEeE
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVEK 159 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~ 159 (256)
...|++++++.+++.+... .++|++++||+ +.+.+++++++.+.+.++++++++.+..++..|+++..+++ ++|..
T Consensus 83 ~~~G~~~sl~~a~~~~~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~~g~v~~d~~-g~v~~ 160 (468)
T 1hm9_A 83 EQLGTGHAVMMTEPILEGL-SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDN-AEVLR 160 (468)
T ss_dssp SCCCHHHHHHTTHHHHTTC-CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTT-CCEEE
T ss_pred ccCChHHHHHHHHHHhccC-CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccCCCCceeEEEECCC-CCEEE
Confidence 6789999999999998631 12899999999 44567999999998888888888888888888999998887 89999
Q ss_pred EeecCCC----CCCCeEEEEEEEeCHhhH-Hhccc---C---CCCcchhhHHHHHhcC-cEEEEEeCceEEe--cCCHHH
Q 046608 160 FVEKPKN----FVGNKINAGIYLLNPSVL-DRIEL---K---PTSIEKEVFPEIAVEN-KLFAMVLPGFWMD--IGQPKD 225 (256)
Q Consensus 160 ~~ek~~~----~~~~~~~~Giy~~~~~~~-~~l~~---~---~~~~~~~~~~~l~~~~-~v~~~~~~~~~~d--i~t~~d 225 (256)
+.|||.. ....++++|+|+|+++.+ +.+.+ . ...+..++++.+++.+ ++.++.++++|.+ |+||+|
T Consensus 161 ~~ek~~~~~~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~d 240 (468)
T 1hm9_A 161 IVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVA 240 (468)
T ss_dssp EECTTTCCTTGGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHH
T ss_pred EEECCCCChHHhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHH
Confidence 9998752 235699999999999854 44432 1 1223478899988876 8999999999976 669999
Q ss_pred HHHHHHHHHhh
Q 046608 226 YITGLRLYLDF 236 (256)
Q Consensus 226 ~~~a~~~~~~~ 236 (256)
|..|+..+..+
T Consensus 241 l~~a~~~~~~~ 251 (468)
T 1hm9_A 241 LATAESVMRRR 251 (468)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999877544
No 19
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.97 E-value=1.1e-30 Score=212.52 Aligned_cols=213 Identities=21% Similarity=0.351 Sum_probs=161.8
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|++||||||.|+||+|+|...||+|+|++|+|||+|+++++.++|+++|+|++++..+.+.+....+ ++.++...+
T Consensus 26 ~~aiIlAaG~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~----~~~iv~~~~ 101 (254)
T 1jyk_A 26 VKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEKY----GVRLVFNDK 101 (254)
T ss_dssp CEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHHH----CCEEEECTT
T ss_pred ceEEEECCCCcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHhC----CcEEEECCC
Confidence 5799999999999999999999999999999999999999999999999999998777666554433 677776666
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccc-hHHHHHHHHhcCCceEEEEEecCCC-cCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRGHGGEASIMVTKVDEP-SKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~~~v~ 158 (256)
+.+.|+++++..+++.++ .+++++||+++..+ +.+++ +. . .+++....++ ..|+++ .|++ ++|.
T Consensus 102 ~~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~--~-~~~t~~~~~~~~~~~v~-~d~~-g~v~ 167 (254)
T 1jyk_A 102 YADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TR--S-TYFSVYREDCTNEWFLV-YGDD-YKVQ 167 (254)
T ss_dssp TTTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CS--E-EEEECEESSCSSCCEEE-ECTT-CBEE
T ss_pred ccCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hC--C-ceEEEEcccCCCCeEEE-ECCC-CeEE
Confidence 667899999999988873 38899999977544 33332 12 2 2333333444 357654 7777 8999
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhc----c---c-C--CCCcchhhHHHHHhcCcEEEEEeC-ceEEecCCHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRI----E---L-K--PTSIEKEVFPEIAVENKLFAMVLP-GFWMDIGQPKDYI 227 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l----~---~-~--~~~~~~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~~ 227 (256)
.+.|++. ..++++|+|+|+++.+..+ . + + ...+..++++.+.+..++.++.++ ++|.+||||+||.
T Consensus 168 ~~~e~~~---~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~ 244 (254)
T 1jyk_A 168 DIIVDSK---AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYR 244 (254)
T ss_dssp EEECCCS---SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHH
T ss_pred EEEECCC---CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHH
Confidence 9999753 3488999999998643321 1 1 1 223345677777766789999887 6999999999999
Q ss_pred HHHHHHH
Q 046608 228 TGLRLYL 234 (256)
Q Consensus 228 ~a~~~~~ 234 (256)
+|++.+.
T Consensus 245 ~a~~~l~ 251 (254)
T 1jyk_A 245 KLEEILK 251 (254)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9987653
No 20
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.97 E-value=2.8e-30 Score=227.08 Aligned_cols=222 Identities=26% Similarity=0.361 Sum_probs=176.6
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.|||||||.|+||++ ..||+|+|++|+|||+|+++.+.++++++++|++++..+.+.+++.+. ++.+. .+
T Consensus 9 ~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~----~~~~v--~~ 79 (459)
T 4fce_A 9 MSVVILAAGKGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP----SLNWV--LQ 79 (459)
T ss_dssp EEEEEEECCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC---------CEE--EC
T ss_pred ceEEEECCCCCccCCC---CCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC----CcEEE--eC
Confidence 4799999999999997 789999999999999999999999999999999999888887777643 34443 45
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe--ecccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
....|++++++.+++.++..+ +|++++||+ +.+.+++++++.+.+ .++++++.+..++..|+++..+ + ++|.
T Consensus 80 ~~~~g~~~~i~~~~~~~~~~~--~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~v~~~-~-g~v~ 153 (459)
T 4fce_A 80 AEQLGTGHAMQQAAPHFADDE--DILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDNPSGYGRIVRE-N-GDVV 153 (459)
T ss_dssp SSCCCHHHHHHHHGGGSCTTS--EEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSCCTTSCEEEEE-T-TEEE
T ss_pred CCCCCcHHHHHHHHHhcCCCC--cEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecCCCCcccEEEeC-C-CcEE
Confidence 677899999999999997422 899999999 445668899887654 4677788888888899999887 5 8999
Q ss_pred EEeecCCC----CCCCeEEEEEEEeCHhhHH-hccc------CCCCcchhhHHHHHhcC-cEEEEEeCce--EEecCCHH
Q 046608 159 KFVEKPKN----FVGNKINAGIYLLNPSVLD-RIEL------KPTSIEKEVFPEIAVEN-KLFAMVLPGF--WMDIGQPK 224 (256)
Q Consensus 159 ~~~ek~~~----~~~~~~~~Giy~~~~~~~~-~l~~------~~~~~~~~~~~~l~~~~-~v~~~~~~~~--~~di~t~~ 224 (256)
.+.||+.. ....++++|+|+|+++.+. .+.. ....+..++++.+...+ ++.++..+++ |++|+||+
T Consensus 154 ~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~ 233 (459)
T 4fce_A 154 GIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRL 233 (459)
T ss_dssp EEECGGGCCTTGGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHH
T ss_pred EEEECCCCChHHhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHH
Confidence 99998642 2356999999999998764 3321 12233478888888876 8999999874 47899999
Q ss_pred HHHHHHHHHHhhh
Q 046608 225 DYITGLRLYLDFL 237 (256)
Q Consensus 225 d~~~a~~~~~~~~ 237 (256)
||..|+..+..++
T Consensus 234 Dl~~ae~~l~~~~ 246 (459)
T 4fce_A 234 QLSALERVFQTEQ 246 (459)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999988776543
No 21
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.97 E-value=1.7e-31 Score=225.05 Aligned_cols=222 Identities=22% Similarity=0.281 Sum_probs=164.8
Q ss_pred CeEEEEeCCCCCccccCC-CCCCCccceeCC-cchHHHHHHHHHHc-CCCEEEEEccCC-hHHHHHHHHhhhhccCcEEE
Q 046608 1 MKALILVGGFGTRLRPLT-LSVPKPLVDFAN-KPMILHQIEALKAV-GVTEVVLAINYQ-PEVMLNFLKEFEKKLEIKIT 76 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~-~~~pK~ll~i~g-~pli~~~l~~l~~~-~i~~i~vv~~~~-~~~i~~~~~~~~~~~~~~v~ 76 (256)
|++||||||.|+||+|+| ...||+|+|++| +|||+|+++++..+ ++++++|++++. ...+.+++.... ...++
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~---~~~ii 78 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP---DENII 78 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSC---GGGEE
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccc---cceEE
Confidence 899999999999999998 689999999988 99999999999997 799999999887 355677766532 12332
Q ss_pred eeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeeccc--chHHH----HHHHHhcCCceEEEEEecCCCcCceeEEE
Q 046608 77 CSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEY--PLKQM----IEFHRGHGGEASIMVTKVDEPSKYGVVVM 150 (256)
Q Consensus 77 ~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~--~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~v~~ 150 (256)
.+..+.|++.++..+...+..+ +.+++++||+++.. ++.++ ++.+.+++..+++...+....+.||++..
T Consensus 79 --~e~~~~gta~ai~~a~~~~~~~--~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~~~~~yG~I~~ 154 (336)
T 2x65_A 79 --AEPMKKNTAPACFIGTKLADDD--EPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRPETGYGYIEI 154 (336)
T ss_dssp --EESSCCCHHHHHHHHHTTSCTT--CEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCSCCSSSEEEEE
T ss_pred --eCCCCCCcHHHHHHHHHhhCCC--CEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecccCCCCceEEEE
Confidence 3456789999999888766432 27999999997743 45444 44455546667776666555578999987
Q ss_pred cCC----CCeEeEEeecCCCC--------CCCeEEEEEEEeCHhhH-HhcccCC-----------C---CcchhhHHH--
Q 046608 151 EET----MGKVEKFVEKPKNF--------VGNKINAGIYLLNPSVL-DRIELKP-----------T---SIEKEVFPE-- 201 (256)
Q Consensus 151 ~~~----~~~v~~~~ek~~~~--------~~~~~~~Giy~~~~~~~-~~l~~~~-----------~---~~~~~~~~~-- 201 (256)
+++ .++|.+|.|||... ...++++|+|+|+++.| +.+.+.. . .+..++++.
T Consensus 155 ~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~ 234 (336)
T 2x65_A 155 GEELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVP 234 (336)
T ss_dssp EEEEETTEEEEEEEEESCCHHHHHHHHHHTCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSC
T ss_pred CCccCCCccEEEEEEECCChHHHHHHHhcCCeEEEeeeEEEEHHHHHHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCc
Confidence 652 15899999999642 12489999999999876 4432100 0 112344443
Q ss_pred -------HHhc-CcEEEEEeCceEEecCCHHHHHHH
Q 046608 202 -------IAVE-NKLFAMVLPGFWMDIGQPKDYITG 229 (256)
Q Consensus 202 -------l~~~-~~v~~~~~~~~~~di~t~~d~~~a 229 (256)
+++. .++.+++.++.|.|||||++|.++
T Consensus 235 ~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 235 SISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp CCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred cccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 3443 589999999999999999999998
No 22
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.97 E-value=2e-29 Score=204.38 Aligned_cols=215 Identities=22% Similarity=0.222 Sum_probs=158.8
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.|+||+ ||+|++++|+|||+|+++.+.++++++|+|+++ .+.+.+++..+ ++++++..+.
T Consensus 11 ~aIIlA~G~stRl~------~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~~----g~~v~~~~~~ 78 (256)
T 3tqd_A 11 RVIIPARFDSTRLP------GKALVDIAGKPMIQHVYESAIKSGAEEVVIATD--DKRIRQVAEDF----GAVVCMTSSD 78 (256)
T ss_dssp EEEEECCCC---CT------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT----TCEEEECCTT
T ss_pred eEEEEcCCCCCCCC------CCCeeeECCchHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHHc----CCeEEEeCCC
Confidence 69999999999994 699999999999999999999999999999985 46777777654 7788776666
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhc-CCceEEEEEecCC------CcCceeEEEcC
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGH-GGEASIMVTKVDE------PSKYGVVVMEE 152 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~-~~~~~i~~~~~~~------~~~~~~v~~~~ 152 (256)
...|++. +..+++.++..+.+.++++.||..+ ...++++++.+.++ +++++.++.+..+ +...+ +..|.
T Consensus 79 ~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vk-vv~d~ 156 (256)
T 3tqd_A 79 HQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTK-VVLNR 156 (256)
T ss_dssp CCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCE-EEECT
T ss_pred CCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccE-EEECC
Confidence 6677754 7888888842112389999999944 45589999988764 4567777776633 33333 56788
Q ss_pred CCCeEeEEeecCCCC--------------CCCeEEEEEEEeCHhhHHhcccCC-CCcch----hhHHHHHhcCcEEEEEe
Q 046608 153 TMGKVEKFVEKPKNF--------------VGNKINAGIYLLNPSVLDRIELKP-TSIEK----EVFPEIAVENKLFAMVL 213 (256)
Q Consensus 153 ~~~~v~~~~ek~~~~--------------~~~~~~~Giy~~~~~~~~~l~~~~-~~~~~----~~~~~l~~~~~v~~~~~ 213 (256)
+ |++..|+++|... .+.+..+|+|.|++++++.+..-. ..++. +.++.+....++.++..
T Consensus 157 ~-g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~leqlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 157 R-NYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQLRILWHGGRIHMVVA 235 (256)
T ss_dssp T-SBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCCEEEEC
T ss_pred C-CEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhHHHHHHHCCCeEEEEEe
Confidence 7 9999999987522 145899999999999999875322 22221 22333444448999999
Q ss_pred Cc-eEEecCCHHHHHHHHH
Q 046608 214 PG-FWMDIGQPKDYITGLR 231 (256)
Q Consensus 214 ~~-~~~di~t~~d~~~a~~ 231 (256)
++ .|.+||||+||.+|++
T Consensus 236 ~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 236 KSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp SSCCCCCCSSHHHHHHHHT
T ss_pred CCCCCCCcCCHHHHHHHHH
Confidence 87 4899999999999975
No 23
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.97 E-value=2.7e-29 Score=204.53 Aligned_cols=218 Identities=18% Similarity=0.178 Sum_probs=164.9
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
+.|||||||.|+||. +|+|++++|+|||+|+++.+.++++++|+|+++ .+.+.+++..+ ++++.+..+
T Consensus 19 ~~aIIlA~G~stRlp------~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~~----g~~v~~~~~ 86 (264)
T 3k8d_A 19 FVVIIPARYASTRLP------GKPLVDINGKPMIVHVLERARESGAERIIVATD--HEDVARAVEAA----GGEVCMTRA 86 (264)
T ss_dssp CEEEEECCSCCSSST------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHT----TCEEEECCT
T ss_pred eEEEEEcCCCCCCCC------CcceeeECCeEHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHHc----CCEEEEecC
Confidence 369999999999993 499999999999999999999999999999984 56777776654 677776666
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCCcCce-----eEEEcCC
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYG-----VVVMEET 153 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~v~~~~~ 153 (256)
....|++. +..++..+...+.+.++++.||..+ ...++++++.+.+.++++++++.+..++..++ .+..|++
T Consensus 87 ~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~ 165 (264)
T 3k8d_A 87 DHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAE 165 (264)
T ss_dssp TCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTT
T ss_pred CCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCC
Confidence 66677755 7778777742122389999999943 45689999999888888899988886543322 3567888
Q ss_pred CCeEeEEeecCCCC-------------CCCeEEEEEEEeCHhhHHhcccCC-CCcch----hhHHHHHhcCcEEEEEeCc
Q 046608 154 MGKVEKFVEKPKNF-------------VGNKINAGIYLLNPSVLDRIELKP-TSIEK----EVFPEIAVENKLFAMVLPG 215 (256)
Q Consensus 154 ~~~v~~~~ek~~~~-------------~~~~~~~Giy~~~~~~~~~l~~~~-~~~~~----~~~~~l~~~~~v~~~~~~~ 215 (256)
|++..|+++|... .+.+.++|+|+|++++++.+.... ..++. +.+..+....++.++...+
T Consensus 166 -g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e~leqlr~le~G~~I~~~~~~~ 244 (264)
T 3k8d_A 166 -GYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQE 244 (264)
T ss_dssp -SBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEECSC
T ss_pred -CeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHHHHHHHHHHHCCCceEEEEeCC
Confidence 9999999997521 246899999999999998764321 12221 2233333444898886655
Q ss_pred -eEEecCCHHHHHHHHHH
Q 046608 216 -FWMDIGQPKDYITGLRL 232 (256)
Q Consensus 216 -~~~di~t~~d~~~a~~~ 232 (256)
.|.+||||+||.+|++.
T Consensus 245 ~~~~~IdtpeDl~~a~~~ 262 (264)
T 3k8d_A 245 VPGTGVDTPEDLERVRAE 262 (264)
T ss_dssp CCSCCCCSHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHH
Confidence 68999999999999864
No 24
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.97 E-value=2.7e-30 Score=217.79 Aligned_cols=222 Identities=21% Similarity=0.307 Sum_probs=159.5
Q ss_pred CeEEEEeCCCCCccccCC-CCCCCccceeCC-cchHHHHHHHHHHc-CCCEEEEEccCCh-HHHHHHHHhhhhccCcEEE
Q 046608 1 MKALILVGGFGTRLRPLT-LSVPKPLVDFAN-KPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEKKLEIKIT 76 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~-~~~pK~ll~i~g-~pli~~~l~~l~~~-~i~~i~vv~~~~~-~~i~~~~~~~~~~~~~~v~ 76 (256)
|++||||||.|+||+|+| ...||+|+|++| +|||+|+++++..+ ++++++|++++.. ..+.+++.. ..+
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~------~~~- 75 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG------IRL- 75 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS------SEE-
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc------Cce-
Confidence 579999999999999999 689999999988 99999999999998 7999999998763 344444432 222
Q ss_pred eeccCCcCCCcHHHHHHHhhhcCC-CCCcEEEEeCCeeccc--chHHHHHHHH---hcCCceEEEEEecCCCcCceeEEE
Q 046608 77 CSQETEPLGTAGPLALARDKLIDD-SGEPFFVLNSDVISEY--PLKQMIEFHR---GHGGEASIMVTKVDEPSKYGVVVM 150 (256)
Q Consensus 77 ~~~~~~~~g~~~s~~~~~~~i~~~-~~~~~lv~~~D~~~~~--~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~v~~ 150 (256)
..+..+.|++.++..+.. +... ..+.+++++||+++.. .+.++++.+. +.+..+++...+......||++..
T Consensus 76 -i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~vt~~i~p~~~~t~yG~I~~ 153 (337)
T 2cu2_A 76 -LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEEGFVVALGLRPTRPETEYGYIRL 153 (337)
T ss_dssp -EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCTTCEEEEEECCSSCCSSSCEEEE
T ss_pred -EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHcCCeEEEeeccCCCCCCceEEEE
Confidence 234557889999988877 5310 1127999999997643 4555554321 224566666666656678999987
Q ss_pred cCC---CCeEeEEeecCCCC-------CCCeEEEEEEEeCHhhH-HhcccCCCC------------cchhhHHH------
Q 046608 151 EET---MGKVEKFVEKPKNF-------VGNKINAGIYLLNPSVL-DRIELKPTS------------IEKEVFPE------ 201 (256)
Q Consensus 151 ~~~---~~~v~~~~ek~~~~-------~~~~~~~Giy~~~~~~~-~~l~~~~~~------------~~~~~~~~------ 201 (256)
+++ .++|.+|.|||... .+.++++|+|+|+++.| +.+.+.... ...+.++.
T Consensus 154 ~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~~~n~Giy~f~~~~ll~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~si 233 (337)
T 2cu2_A 154 GPREGAWYRGEGFVEKPSYAEALEYIRKGYVWNGGVFAFAPATMAELFRRHLPSHHEALERLLAGASLEEVYAGLPKISI 233 (337)
T ss_dssp EEEETTEEEEEEEECCCCHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCH
T ss_pred CCcccccCeEEEEEeCCChHHHHHHhhcCCEEEEEEEEEeHHHHHHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccchH
Confidence 752 15899999998632 12699999999999887 544321000 01233332
Q ss_pred ---HHhc-CcEEEEEeCceEEecCCHHHHHHHHH
Q 046608 202 ---IAVE-NKLFAMVLPGFWMDIGQPKDYITGLR 231 (256)
Q Consensus 202 ---l~~~-~~v~~~~~~~~~~di~t~~d~~~a~~ 231 (256)
+++. .++.+++.++.|.|||||++|+++..
T Consensus 234 dy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~ 267 (337)
T 2cu2_A 234 DYGVMEKAERVRVVLGRFPWDDVGNWRALERVFS 267 (337)
T ss_dssp HHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHT
T ss_pred HHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhh
Confidence 3444 48999999999999999999998853
No 25
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.96 E-value=2.9e-28 Score=214.00 Aligned_cols=221 Identities=22% Similarity=0.338 Sum_probs=175.7
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.|||||||.|+||++ ..||+|+|++|+|||+|+++.+.++++++++|++++..+.+.+++.++ +++++ .+
T Consensus 6 ~~aiIlA~G~g~Rl~~---~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~----~~~~v--~~ 76 (456)
T 2v0h_A 6 LSAVILAAGKGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE----QVNWV--LQ 76 (456)
T ss_dssp EEEEEECCCCCGGGCS---SSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC----CCEEE--EC
T ss_pred ceEEEECCCCCcccCC---CCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC----CcEEE--eC
Confidence 4689999999999986 789999999999999999999999999999999998877777776543 34443 35
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe--ecccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV--ISEYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
....|++++++.+++.+...+ ++++++||+ +.+.+++++++.+.+ .++++++.+..++..|+.+..+ + +++.
T Consensus 77 ~~~~g~~~~~~~~~~~~~~~~--~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~v~~~-~-g~v~ 150 (456)
T 2v0h_A 77 TEQLGTAHAVQQAAPFFKDNE--NIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLDNPTGYGRIIRE-N-GNVV 150 (456)
T ss_dssp SCCCCHHHHHHHHGGGCCTTS--EEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSSCTTSCEEEEE-T-TEEE
T ss_pred CCCCCcHHHHHHHHHhcCCCC--eEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecCCCCccceEEEc-C-CcEE
Confidence 567899999999999986322 899999999 335668899887765 5678888887788889988887 5 8999
Q ss_pred EEeecCCC----CCCCeEEEEEEEeCHhhH-Hhccc---C---CCCcchhhHHHHHhcC-cEEEEEeCc--eEEecCCHH
Q 046608 159 KFVEKPKN----FVGNKINAGIYLLNPSVL-DRIEL---K---PTSIEKEVFPEIAVEN-KLFAMVLPG--FWMDIGQPK 224 (256)
Q Consensus 159 ~~~ek~~~----~~~~~~~~Giy~~~~~~~-~~l~~---~---~~~~~~~~~~~l~~~~-~v~~~~~~~--~~~di~t~~ 224 (256)
.+.||+.. ....++++|+|+|+++.+ +.+.. . ...+..++++.+...+ ++..+..++ .|++||||+
T Consensus 151 ~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpe 230 (456)
T 2v0h_A 151 AIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRL 230 (456)
T ss_dssp EEECTTTCCHHHHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHH
T ss_pred EEEECCCCChhHhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHH
Confidence 99998652 134689999999999865 44432 1 1223468888888776 798899865 367999999
Q ss_pred HHHHHHHHHHhh
Q 046608 225 DYITGLRLYLDF 236 (256)
Q Consensus 225 d~~~a~~~~~~~ 236 (256)
||.+|++.+..+
T Consensus 231 Dl~~a~~~l~~~ 242 (456)
T 2v0h_A 231 QLAALERYFQNK 242 (456)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999876544
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.96 E-value=6.8e-28 Score=195.17 Aligned_cols=219 Identities=16% Similarity=0.158 Sum_probs=160.6
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHH-HHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQI-EALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l-~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
.+||||||.|+||++ |+|++++|+|||+|++ +.+.++++++|+|+++ .+.+.+++..+ ++++.+..+
T Consensus 3 ~aiIlA~G~stR~~~------K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~~----g~~v~~~~~ 70 (253)
T 4fcu_A 3 HIVIPARFSSSRLPG------KPLLLIHDRPMILRVVDQAKKVEGFDDLCVATD--DERIAEICRAE----GVDVVLTSA 70 (253)
T ss_dssp EEEEECCSCCTTSTT------GGGSEETTEEHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHTT----TCCEEECCT
T ss_pred EEEEEeCCCCCCCCC------CceeeECCeEhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHHc----CCeEEEeCC
Confidence 589999999999964 9999999999999999 9999889999999995 46666666543 677766555
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcC-CceEEEEEec------CCCcCceeEEEc
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHG-GEASIMVTKV------DEPSKYGVVVME 151 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~-~~~~i~~~~~------~~~~~~~~v~~~ 151 (256)
....|+ +++..++..++..+.+.++++.||..+ ...++++++.+.+++ .+.+.++++. .+|..+ .+..|
T Consensus 71 ~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~-kvv~d 148 (253)
T 4fcu_A 71 DHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIV-KVVMS 148 (253)
T ss_dssp TCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSC-EEEEC
T ss_pred CCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCcc-EEEEC
Confidence 555666 578888888863222389999999943 456899999887663 3443343442 345554 45678
Q ss_pred CCCCeEeEEeecCCC-------------CCCCeEEEEEEEeCHhhHHhcccCC-CCcc-hhhH---HHHHhcCcEEEEEe
Q 046608 152 ETMGKVEKFVEKPKN-------------FVGNKINAGIYLLNPSVLDRIELKP-TSIE-KEVF---PEIAVENKLFAMVL 213 (256)
Q Consensus 152 ~~~~~v~~~~ek~~~-------------~~~~~~~~Giy~~~~~~~~~l~~~~-~~~~-~~~~---~~l~~~~~v~~~~~ 213 (256)
.+ |++..|+++|.. ....+.++|+|+|++++|..+.... ..++ .+.+ ..+....++.++..
T Consensus 149 ~~-g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~le~~e~le~lr~l~~G~~I~~~~~ 227 (253)
T 4fcu_A 149 KQ-NEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVA 227 (253)
T ss_dssp TT-SBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHHHHHTTCCEEEEEC
T ss_pred CC-CeEEEecCCCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCcccchhHHHHHHHHHCCCceEEEEe
Confidence 87 999999987642 1234789999999999999875322 2221 1223 33334348999999
Q ss_pred Cce-EEecCCHHHHHHHHHHHHh
Q 046608 214 PGF-WMDIGQPKDYITGLRLYLD 235 (256)
Q Consensus 214 ~~~-~~di~t~~d~~~a~~~~~~ 235 (256)
++. |.+||||+||.+|++.+.+
T Consensus 228 ~~~~~~~IdtpeDL~~a~~~l~~ 250 (253)
T 4fcu_A 228 EANLPPGVDTQADLDRLNNMPVE 250 (253)
T ss_dssp SSCCCCCCCSHHHHHHHHTSCGG
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh
Confidence 888 9999999999999875543
No 27
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.96 E-value=3.9e-27 Score=192.42 Aligned_cols=221 Identities=18% Similarity=0.190 Sum_probs=158.0
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.+||||||.|+||+ +|+|++++|+|||+|+++.+.++++++|+|++++ +.+.+++..+ ++.++...+
T Consensus 3 ~~aiIlA~G~g~R~~------~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~~----~~~~~~~~~ 70 (262)
T 1vic_A 3 FTVIIPARFASSRLP------GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN--ENVADVAKSF----GAEVCMTSV 70 (262)
T ss_dssp CEEEEECCCCCSSST------TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHHT----TCEEEECCC
T ss_pred cEEEEEcCCCCCCCC------CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHhc----CCEEEECCc
Confidence 479999999999994 4999999999999999999999999999999965 4566666543 676655433
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCC-----cCceeEEEcCC
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEP-----SKYGVVVMEET 153 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~v~~~~~ 153 (256)
....|++ ++..++..+.....+.+++++||+.+ ...++++++.+.+.++++++++.+..++ ..+..+..+++
T Consensus 71 ~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (262)
T 1vic_A 71 NHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKD 149 (262)
T ss_dssp SSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEECTT
T ss_pred cccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEECCC
Confidence 3445554 45556666643222379999999943 4568999998887777888877777653 34555555766
Q ss_pred CCeEeEEeecCC-----------------CCCCCeEEEEEEEeCHhhHHhcccCCCC-cc-hhhHH--HHHh-cCcEEEE
Q 046608 154 MGKVEKFVEKPK-----------------NFVGNKINAGIYLLNPSVLDRIELKPTS-IE-KEVFP--EIAV-ENKLFAM 211 (256)
Q Consensus 154 ~~~v~~~~ek~~-----------------~~~~~~~~~Giy~~~~~~~~~l~~~~~~-~~-~~~~~--~l~~-~~~v~~~ 211 (256)
|.+..+.+++. .+.....++|+|+|+++++..+...... +. .+++. .++. ..++.++
T Consensus 150 -g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~e~~~~~~~l~~g~~v~~~ 228 (262)
T 1vic_A 150 -GYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVE 228 (262)
T ss_dssp -SBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEE
T ss_pred -CCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCchhhhhhHHHHHHHHCCCeEEEE
Confidence 88888877641 2223589999999999988765321111 11 11111 2343 4489999
Q ss_pred EeC-ceEEecCCHHHHHHHHHHHHh
Q 046608 212 VLP-GFWMDIGQPKDYITGLRLYLD 235 (256)
Q Consensus 212 ~~~-~~~~di~t~~d~~~a~~~~~~ 235 (256)
..+ +.|+|||||+||..|+..+..
T Consensus 229 ~~~~~~~~dI~tpeDl~~a~~~l~~ 253 (262)
T 1vic_A 229 LAKEVPAVGVDTAEDLEKVRAILAA 253 (262)
T ss_dssp ECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHh
Confidence 998 689999999999999887654
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.96 E-value=5.6e-27 Score=189.60 Aligned_cols=218 Identities=20% Similarity=0.199 Sum_probs=156.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCC-CEEEEEccCChHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i-~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|.+||||||.|+|| | ||+|++++|+|||+|+++.+..+++ ++|+|++++ +.+.+++..+ +++++...
T Consensus 3 ~~aiIlA~G~~~R~-~-----~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~----~~~~~~~~ 70 (245)
T 1h7e_A 3 AVIVIPARYGSSRL-P-----GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQAF----GGKAIMTR 70 (245)
T ss_dssp EEEEEECCSCCSSS-T-----TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHHT----TCEEEECC
T ss_pred eEEEEEcCCcCCCC-C-----CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHHc----CCeEEeCC
Confidence 36899999999999 4 8999999999999999999999996 999999975 5666666653 67776554
Q ss_pred cCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhc-CCceEEEEEecC-----CCcCceeEEEc
Q 046608 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGH-GGEASIMVTKVD-----EPSKYGVVVME 151 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~-~~~~~i~~~~~~-----~~~~~~~v~~~ 151 (256)
+....|+ .++..++..++.+ .+++++||+.+ ...++++++.+..+ ++++++.+.+.+ ++... .+..+
T Consensus 71 ~~~~~g~-~~~~~~~~~~~~~---~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 145 (245)
T 1h7e_A 71 NDHESGT-DRLVEVMHKVEAD---IYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTV-KVVVN 145 (245)
T ss_dssp SCCSSHH-HHHHHHHHHSCCS---EEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSC-EEEEC
T ss_pred CccCCcH-HHHHHHHHhCCCC---EEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHHhcCCCCc-EEEEC
Confidence 4445566 4455666666433 79999999944 45589999988777 677777776651 12222 23335
Q ss_pred CCCCeEeEEeecCCC-C-----CCCeEEEEEEEeCHhhHHhcccCC-CCc-chhhHHHHH--h-cCcEEEEEeCceEEec
Q 046608 152 ETMGKVEKFVEKPKN-F-----VGNKINAGIYLLNPSVLDRIELKP-TSI-EKEVFPEIA--V-ENKLFAMVLPGFWMDI 220 (256)
Q Consensus 152 ~~~~~v~~~~ek~~~-~-----~~~~~~~Giy~~~~~~~~~l~~~~-~~~-~~~~~~~l~--~-~~~v~~~~~~~~~~di 220 (256)
.+ +.+..+.+++.. . .+.+.++|+|+|+++.+....... ..+ ..+.++.+. . ..++.++..++.|+||
T Consensus 146 ~~-g~~~~~~~~~~~~~r~~~~~~~~~~~g~y~~~~~~l~~~~~~~~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dI 224 (245)
T 1h7e_A 146 TR-QDALYFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGV 224 (245)
T ss_dssp TT-CBEEEEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCS
T ss_pred CC-CcEEEeecCCCCCCcccccCceeEEEEEEEcCHHHHHHHHhCCCCccccchhhHHHHHHHCCCeEEEEEeCCCCCCC
Confidence 55 888888876432 1 125789999999999876543211 111 123333332 3 4489999999899999
Q ss_pred CCHHHHHHHHHHHHhh
Q 046608 221 GQPKDYITGLRLYLDF 236 (256)
Q Consensus 221 ~t~~d~~~a~~~~~~~ 236 (256)
|||+||..|+..+..+
T Consensus 225 dtp~Dl~~a~~~l~~~ 240 (245)
T 1h7e_A 225 DTPACLEKVRALMAQE 240 (245)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999998876554
No 29
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.95 E-value=4.5e-27 Score=188.84 Aligned_cols=212 Identities=18% Similarity=0.211 Sum_probs=151.7
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.|+||+ ||+|+|++|+|||+|+++.+.++ +++|+|++++ +.+.+++..+ +.+.+..+.
T Consensus 4 ~aiIlA~G~g~R~~------~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~~-----~~~~~~~~~ 69 (234)
T 2y6p_A 4 AVIIPARLGSTRLK------EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS--ERVKEVVEDL-----CEVFLTPSD 69 (234)
T ss_dssp EEEEECCSCCTTTT------TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTTT-----SEEEECCTT
T ss_pred EEEEEcCCCCCCCC------CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHhc-----eEEEECCcc
Confidence 68999999999996 69999999999999999999999 9999999976 5666666532 455555444
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe-ecc-cchHHHHHHHHhcCCceEEEEEec---CCCcCceeEEEcCCCCe
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDV-ISE-YPLKQMIEFHRGHGGEASIMVTKV---DEPSKYGVVVMEETMGK 156 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~-~~~-~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~v~~~~~~~~ 156 (256)
...|++.++ .+++.++.+ ++++++||+ +++ .+++++++.+.+.+..++++.... .++..++ +..+++ |+
T Consensus 70 ~~~g~~~~~-~~~~~~~~~---~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-g~ 143 (234)
T 2y6p_A 70 LPSGSDRVL-YVVRDLDVD---LIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERPEDVK-VVLDRE-GY 143 (234)
T ss_dssp CCSHHHHHH-HHHTTCCCS---EEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCTTSCE-EEECTT-SB
T ss_pred cccchHHHH-HHHHhCCCC---EEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCCCceE-EEEcCC-CC
Confidence 456666654 566666443 899999999 665 568999998877663333333311 1333344 344666 89
Q ss_pred EeEEeecCCC--C----CCCeEEEEEEEeCHhhHHhcccCCCC-cc-hh---hHHHHHhcCcEEEEEeCceEEecCCHHH
Q 046608 157 VEKFVEKPKN--F----VGNKINAGIYLLNPSVLDRIELKPTS-IE-KE---VFPEIAVENKLFAMVLPGFWMDIGQPKD 225 (256)
Q Consensus 157 v~~~~ek~~~--~----~~~~~~~Giy~~~~~~~~~l~~~~~~-~~-~~---~~~~l~~~~~v~~~~~~~~~~di~t~~d 225 (256)
|..+.+|+.. . .+.+.++|+|+|+++.+..+...... ++ .+ .++.+....++.++..+++|+|||||+|
T Consensus 144 v~~~~e~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~d 223 (234)
T 2y6p_A 144 ALYFSRSPIPYFRKNDTFYPLKHVGIYGFRKETLMEFGAMPPSKLEQIEGLEQLRLLENGIKIKVLITENYYHGVDTEED 223 (234)
T ss_dssp EEEEESSCCSCCSSCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHH
T ss_pred EeeeecCCCCcccccccceeeEEEEEEEcCHHHHHHHHhCCCCccchhhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHH
Confidence 9999998742 1 13578999999999988776432111 11 11 1233334558999999999999999999
Q ss_pred HHHHHHHH
Q 046608 226 YITGLRLY 233 (256)
Q Consensus 226 ~~~a~~~~ 233 (256)
|..|+..+
T Consensus 224 l~~a~~~~ 231 (234)
T 2y6p_A 224 LKIVEEKL 231 (234)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99998653
No 30
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.94 E-value=4.6e-26 Score=182.77 Aligned_cols=208 Identities=21% Similarity=0.319 Sum_probs=131.9
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.+||||||.|+||+|+ ||+|++++|+|||+|+++.+.++ +++|+|++ +..+.+.+++.. .++..+.++.+
T Consensus 19 ~~~iIlA~G~g~R~~~~----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~---~~~~~~~~v~~ 89 (232)
T 2xme_A 19 MKAVILAAGLGTRLGGV----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLK---DKGFNYKIVRH 89 (232)
T ss_dssp EEEEEEECC------CC----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHT---TSCCCEEEEEC
T ss_pred ceEEEECCcCcCcCCCC----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHH---hcCCcEEEEEC
Confidence 47999999999999884 99999999999999999999999 99999999 666677666432 12333333443
Q ss_pred CC-cCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccc-hHHHHHHHHhcCCceEEEEEec--CCCcCceeEEEcCCCCe
Q 046608 81 TE-PLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRGHGGEASIMVTKV--DEPSKYGVVVMEETMGK 156 (256)
Q Consensus 81 ~~-~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~v~~~~~~~~ 156 (256)
.. ..|+++++..+++.++ + ++++++||++++.+ ++++++ .. . +++.... .+...++.+..+ + ++
T Consensus 90 ~~~~~g~~~~i~~a~~~~~-~---~~lv~~~D~p~~~~~~~~l~~----~~-~-~~~~~~~~~~~~~~~~~v~~~-~-g~ 157 (232)
T 2xme_A 90 DRPEKGNGYSLLVAKNHVE-D---RFILTMGDHVYSQQFIEKAVR----GE-G-VIADREPRFVDIGEATKIRVE-D-GR 157 (232)
T ss_dssp SCGGGCHHHHHHTTGGGCC-S---SEEEEETTEEECHHHHHHHTT----CC-E-EEEESSCSSSCTTTSCEEEEE-T-TE
T ss_pred CCCCCCcHHHHHHHHHHCC-C---CEEEEcCCcccCHHHHHHHHh----CC-C-cEEEccccccCCCcceEEEEc-C-CE
Confidence 33 3789999999999886 3 69999999987544 344443 21 1 2221111 123456666666 4 89
Q ss_pred EeEEeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHHH
Q 046608 157 VEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVENKLFAMVLP-GFWMDIGQPKDYITGLRL 232 (256)
Q Consensus 157 v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~~~a~~~ 232 (256)
|..+.+++. ..+.+++|+|+++++++..+.+....-+ .-+..+++.+.+..+.++ +.|+|||||+||.+|++.
T Consensus 158 v~~~~~~~~--~~~~~~~g~~~~~~~~~~~l~~~~~~g~-~~l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 158 VAKIGKDLR--EFDCVDTGFFVLDDSIFEHAEKLRDREE-IPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp EEEEETTCS--SCSEEEEEEEEECTTHHHHHGGGTTSSC-CCHHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred EEEeecCCC--CcceEEEEEEEECHHHHHHHHHHHhcCh-hHHHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 999988774 3468899999999999887654211100 112233333456666665 589999999999988754
No 31
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.92 E-value=1.3e-24 Score=174.61 Aligned_cols=215 Identities=11% Similarity=0.136 Sum_probs=137.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCCh-HHHHHHHHhhhhccCcEEEee
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQP-EVMLNFLKEFEKKLEIKITCS 78 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~-~~i~~~~~~~~~~~~~~v~~~ 78 (256)
|.+||||||.|+||++ ...||+|+|++|+|||+|+++.+.+++ +++|+|++++.. +.+.+++..++-........
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERIII- 79 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEEE-
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhccccccCceEE-
Confidence 5799999999999987 568999999999999999999999984 999999998876 56777665542111011111
Q ss_pred ccCCcCCCcHHHHHHHhhhcC--C--CCCcEEEEeCCe-ec-ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcC
Q 046608 79 QETEPLGTAGPLALARDKLID--D--SGEPFFVLNSDV-IS-EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEE 152 (256)
Q Consensus 79 ~~~~~~g~~~s~~~~~~~i~~--~--~~~~~lv~~~D~-~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~ 152 (256)
...+.|..+++..++..+.. . +.+.+++++||+ ++ ...++++++.+.++++ .+++.+..++ +..++
T Consensus 80 -~~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~~~~~-----~~~~~ 151 (236)
T 2vsh_A 80 -TKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVEAVDT-----IVEST 151 (236)
T ss_dssp -EECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEECCSC-----EEECS
T ss_pred -ECCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEecccc-----EEEeC
Confidence 12235778899999988841 0 112799999999 43 4468999998876654 3444455443 22234
Q ss_pred CCC-eEeEEeecCCCCCCCeEE-EEEEEeCHhhHHhcccCCC----C-cchhhHHHHHhcC-cEEEEEeCceEEecCCHH
Q 046608 153 TMG-KVEKFVEKPKNFVGNKIN-AGIYLLNPSVLDRIELKPT----S-IEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPK 224 (256)
Q Consensus 153 ~~~-~v~~~~ek~~~~~~~~~~-~Giy~~~~~~~~~l~~~~~----~-~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~ 224 (256)
+ | ++..+.+++. ... ...++|+++.+..+..... . + .+.++.+...+ ++..+..++.|+|||||+
T Consensus 152 ~-g~~~~~~~~~~~-----~~~~~~p~~f~~~~l~~~~~~~~~~g~~~~-~~~~~~l~~~~~~v~~~~~~~~~~dIdtpe 224 (236)
T 2vsh_A 152 N-GQFITDIPNRAH-----LYQGQTPQTFRCKDFMDLYGSLSDEEKEIL-TDACKIFVIKGKDVALAKGEYSNLKITTVT 224 (236)
T ss_dssp S-SSBCCBCCCGGG-----EEEEEEEEEEEHHHHHHHHHTCCHHHHHHC-CSHHHHHHHTTCCEEEEECCTTCCCCCSHH
T ss_pred C-CCeeeeecChHH-----heeecCCcEecHHHHHHHHHHHHhcCCCcC-CCHHHHHHHcCCCEEEEECCccccCcCCHH
Confidence 4 6 7877776542 222 2378899887664322111 1 1 23334444444 788888778999999999
Q ss_pred HHHHHHHHH
Q 046608 225 DYITGLRLY 233 (256)
Q Consensus 225 d~~~a~~~~ 233 (256)
||..|+..+
T Consensus 225 Dl~~a~~~~ 233 (236)
T 2vsh_A 225 DLKIAKSMI 233 (236)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999997654
No 32
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.92 E-value=2.2e-24 Score=172.54 Aligned_cols=203 Identities=11% Similarity=0.123 Sum_probs=143.5
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
.+||||||.|+||+ ||+|++++|+|||+|+++.+.+++ +++|+|++++ +.+.+++..+ ++++...+.
T Consensus 6 ~aiIlA~G~g~R~~------~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~~----~~~~~~~~~ 73 (228)
T 1ezi_A 6 IAVILARQNSKGLP------LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKNF----GVEVVLRPA 73 (228)
T ss_dssp EEEEECCSSCSSST------TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHHT----TCEEEECCC
T ss_pred EEEEecCCCCCCCC------CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHHc----CCEEEeCch
Confidence 39999999999997 699999999999999999999998 7999999953 5555665543 566533222
Q ss_pred ---CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCC-CcCceeEEEcCCC
Q 046608 81 ---TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDE-PSKYGVVVMEETM 154 (256)
Q Consensus 81 ---~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~v~~~~~~ 154 (256)
....|+.+++..+++.+... .+.+++++||+.+ ...++++++.+.++++++++.+.+..+ +..+ ...+++
T Consensus 74 ~~~~~~~g~~~sv~~~l~~~~~~-~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~- 149 (228)
T 1ezi_A 74 ELASDTASSISGVIHALETIGSN-SGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKT--LLQINN- 149 (228)
T ss_dssp ------CHHHHHHHHHHHHHTCC-SEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSSCTTSC--EEECC--
T ss_pred HHcCCCCChHHHHHHHHHHhCCC-CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCCCccee--eEEcCC-
Confidence 13556788999999988421 1279999999944 455888888777667778887777765 3333 333665
Q ss_pred CeEeEEee-c---CC-CC--CCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcCcEEEEEeC-ceEEecCCHHHH
Q 046608 155 GKVEKFVE-K---PK-NF--VGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVENKLFAMVLP-GFWMDIGQPKDY 226 (256)
Q Consensus 155 ~~v~~~~e-k---~~-~~--~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~ 226 (256)
|.+..+.+ + +. .. .....++|+|+++++.+..... + ...++..+..+ +.|+|||||+||
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~--------~-----~g~~v~~~~~~~~~~~dIdtpeDl 216 (228)
T 1ezi_A 150 GEYAPMRHLSDLEQPRQQLPQAFRPNGAIYINDTASLIANNC--------F-----FIAPTKLYIMSHQDSIDIDTELDL 216 (228)
T ss_dssp -CEEESSCHHHHTCCGGGSCCEEEEEEEEEEEEHHHHHHHTS--------S-----CCSSCEEEECCTGGGCCCCSHHHH
T ss_pred CcEeeccccccccCCcccCchhheeeeEEEEEeHHHHhhCCc--------c-----cCCceEEEEeCcccccCCCCHHHH
Confidence 78888766 2 11 11 1225678999999887665210 0 03466677766 479999999999
Q ss_pred HHHHHHH
Q 046608 227 ITGLRLY 233 (256)
Q Consensus 227 ~~a~~~~ 233 (256)
..|+..+
T Consensus 217 ~~a~~~l 223 (228)
T 1ezi_A 217 QQAENIL 223 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998765
No 33
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.92 E-value=4.7e-24 Score=172.50 Aligned_cols=220 Identities=13% Similarity=0.097 Sum_probs=147.4
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChH-HHHHHHHhhhhccCcEEEeec
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPE-VMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~-~i~~~~~~~~~~~~~~v~~~~ 79 (256)
.+||||||.|+||++ ...||+|++++|+|||+|+++.+.+++ +++|+|+++++.. .+.+.+..+.....+.+ ..
T Consensus 5 ~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~~~~~~--~~ 80 (246)
T 3f1c_A 5 YAQILAGGKGTRMGN--VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISDDRIVV--IE 80 (246)
T ss_dssp EEEEECC-----C-C--SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCCTTEEE--EE
T ss_pred EEEEECCccccccCC--CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCCCCEEE--EC
Confidence 599999999999976 467999999999999999999999997 9999999987654 35555555422112322 22
Q ss_pred cCCcCCCcHHHHHHHhhhcC----CCCCcEEEEeCCee--cccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCC
Q 046608 80 ETEPLGTAGPLALARDKLID----DSGEPFFVLNSDVI--SEYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEET 153 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~----~~~~~~lv~~~D~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~ 153 (256)
.+.+..+++..+++.+.. ...+.+++++||.. ....++++++.+.+++ +.+.+.+..+ .++..+++
T Consensus 81 --~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~--a~i~~~~~~d----~i~~~~~~ 152 (246)
T 3f1c_A 81 --GGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG--AVDTVIEALD----TIVESSNH 152 (246)
T ss_dssp --CCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS--EEEEEEECSS----CEEECSSS
T ss_pred --CCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEEeccc----eEEEecCC
Confidence 245678899999998864 11228999999993 3455899999888765 4445555543 33444444
Q ss_pred CCeEeEEeecCCCCCCCeEEEEEEEeCHhhHHhcccCC----CCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHH
Q 046608 154 MGKVEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKP----TSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYIT 228 (256)
Q Consensus 154 ~~~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~----~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~ 228 (256)
+.|..+.+++. -+..-..++|+.+.+....... ..+..|....+...| ++..++.++.|++|+||+||..
T Consensus 153 -~~v~~~~~r~~----l~~~qtpq~f~~~~L~~a~~~~~~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ 227 (246)
T 3f1c_A 153 -EVITDIPVRDH----MYQGQTPQSFNMKKVFNHYQNLTPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKV 227 (246)
T ss_dssp -SBCCBCCCGGG----EEEEEEEEEEEHHHHHHHHHTSCHHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHH
T ss_pred -CeEEEecChHH----hhhhcCCceeEHHHHHHHHHHHHHcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHH
Confidence 66666655543 1222245788876655432211 112256666677666 7989998889999999999999
Q ss_pred HHHHHHhhhc
Q 046608 229 GLRLYLDFLQ 238 (256)
Q Consensus 229 a~~~~~~~~~ 238 (256)
|+..+..+..
T Consensus 228 ae~~l~~~~~ 237 (246)
T 3f1c_A 228 ANAIIQERIA 237 (246)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHhcccc
Confidence 9987765543
No 34
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.92 E-value=3e-24 Score=171.06 Aligned_cols=210 Identities=17% Similarity=0.168 Sum_probs=145.1
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChH-HHHHHHHhhhhccCcEEEee
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPE-VMLNFLKEFEKKLEIKITCS 78 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~-~i~~~~~~~~~~~~~~v~~~ 78 (256)
|.+||||||.|+||+. ..||+|++++|+|||+|+++.+..++ +++|+|++++... .+.+++. ..++.+ .
T Consensus 3 ~~~vIlA~G~g~R~~~---~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~----~~~v~~--~ 73 (223)
T 2xwl_A 3 TVAVVPAAGSGERLRA---GRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG----GEDSVI--V 73 (223)
T ss_dssp EEEEEECCCCCGGGTS---SSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC----BTTEEE--E
T ss_pred eEEEEECCccCcccCC---CCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc----cCCeEE--E
Confidence 4699999999999983 57999999999999999999999988 8999999987653 3444332 113433 3
Q ss_pred ccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCee-cc-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCe
Q 046608 79 QETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SE-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGK 156 (256)
Q Consensus 79 ~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~ 156 (256)
.+ ..+.++++..++..+... +.+++++||+. .+ ..++++++.+. ...++++.+.+..++..+ .+++ |+
T Consensus 74 ~~--~~~~~~~i~~al~~~~~~--~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~d~~~~----~~~~-g~ 143 (223)
T 2xwl_A 74 SG--GVDRTESVALALEAAGDA--EFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPADTIKA----VDAN-GA 143 (223)
T ss_dssp EC--CSSHHHHHHHHHTTCTTC--SEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCSSCEEE----ECTT-SB
T ss_pred cC--CCCHHHHHHHHHHhcCCC--CEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecccceEE----EcCC-Cc
Confidence 32 245688999999888321 27899999994 34 45889988773 234566666665554322 2555 78
Q ss_pred EeEEeecCCCCCCCeEE-EEEEEeCHhhHHhcccCC-CCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHHHHH
Q 046608 157 VEKFVEKPKNFVGNKIN-AGIYLLNPSVLDRIELKP-TSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 157 v~~~~ek~~~~~~~~~~-~Giy~~~~~~~~~l~~~~-~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~a~~~~ 233 (256)
+..+.+++. +.. ...++|++..+..+.... ..+..+....+...+ ++..+..++.|+|||||+||..|+..+
T Consensus 144 ~~~~~e~~~-----l~~~~~p~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l 218 (223)
T 2xwl_A 144 VLGTPERAG-----LRAVQTPQGFHADVLRRAYARATAGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL 218 (223)
T ss_dssp EEECCCGGG-----EEEECSCEEEEHHHHHHHHTTCCSCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred EEeecChHH-----heeeeCCcccCHHHHHHHHHHhhCCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHH
Confidence 888877652 222 235788887766553222 122234444444444 788888888999999999999998765
Q ss_pred H
Q 046608 234 L 234 (256)
Q Consensus 234 ~ 234 (256)
.
T Consensus 219 ~ 219 (223)
T 2xwl_A 219 A 219 (223)
T ss_dssp H
T ss_pred h
Confidence 4
No 35
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.91 E-value=7.6e-24 Score=169.51 Aligned_cols=203 Identities=13% Similarity=0.106 Sum_probs=137.0
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
.+||||||.|+||+ +|+|++++|+|||+|+++.+.+++ +++|+|++ +.+.+.+++..+ ++++....+
T Consensus 5 ~aiIlA~G~s~R~~------~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~--~~~~i~~~~~~~----g~~~~~~~~ 72 (229)
T 1qwj_A 5 AALVLARGGSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVST--DHDEIENVAKQF----GAQVHRRSS 72 (229)
T ss_dssp EEEEECCSCCSSSS------CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEE--SCHHHHHHHHHT----TCEEEECCG
T ss_pred EEEEEcCCCCCCCC------CcccceECCEEHHHHHHHHHHhCCCcCEEEEEC--ChHHHHHHHHHc----CCEEEeChh
Confidence 58999999999995 399999999999999999999998 69999998 356676666543 676654332
Q ss_pred C---CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCC
Q 046608 81 T---EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMG 155 (256)
Q Consensus 81 ~---~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~ 155 (256)
. ...+..+++..++..+... +.+++++||+.+ ...++++++.+.+.+++.++.+....++..+.. .+ +..
T Consensus 73 ~~~~~~~~~~~~v~~al~~~~~~--d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~~~p~~~~v--~~-~~~ 147 (229)
T 1qwj_A 73 ETSKDSSTSLDAIVEFLNYHNEV--DIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQFRWSEI--QK-GVR 147 (229)
T ss_dssp GGSSTTCCHHHHHHHHHTTCTTC--SEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEECCCEECCC--CS-STT
T ss_pred hhcCCCCcHHHHHHHHHHhcCCC--CEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeeccChhHhhc--cc-ccc
Confidence 1 2233347888888887322 279999999944 356899999888777776665554455555533 12 101
Q ss_pred eEeE--Eeec----CCCC--CCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcCcEEEEEeC-ceEEecCCHHHH
Q 046608 156 KVEK--FVEK----PKNF--VGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVENKLFAMVLP-GFWMDIGQPKDY 226 (256)
Q Consensus 156 ~v~~--~~ek----~~~~--~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~ 226 (256)
.+.+ +.++ ..+. .....++|+|+++++.| + ..+.....+.++..+ +.|.|||||+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l--~------------~~~~~g~~~~~~~~~~~~~~dIdt~~Dl 213 (229)
T 1qwj_A 148 EVTEPLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI--E------------MGYLQGGKMAYYEMRAEHSVDIDVDIDW 213 (229)
T ss_dssp CCCCBSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH--H------------TTCSSCSSEEEEECCGGGCCCHHHHCSH
T ss_pred ccccccccccccccCCCCCCceEEEeeEEEEEEHHHh--c------------cccccCCeEEEEECCcccccCCCCHHHH
Confidence 1211 1111 1111 22367999999999888 1 111112244332555 589999999999
Q ss_pred HHHHHHHHh
Q 046608 227 ITGLRLYLD 235 (256)
Q Consensus 227 ~~a~~~~~~ 235 (256)
..|+..+..
T Consensus 214 ~~a~~~~~~ 222 (229)
T 1qwj_A 214 PIAEQRVLR 222 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999876644
No 36
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.91 E-value=4.1e-23 Score=165.32 Aligned_cols=210 Identities=16% Similarity=0.165 Sum_probs=130.4
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|.+||||||.|+||++ ..||+|++++|+|||+|+++.+.+++ +++|+|++++..+.+.+ +..++. ..+ .+.
T Consensus 7 ~~aiIlA~G~g~R~~~---~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~-~~i--~~~- 78 (231)
T 1vgw_A 7 NIALIPAAGIGVRFGA---DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFP-QVR--VWK- 78 (231)
T ss_dssp EEEEEECC-------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCT-TSE--EEC-
T ss_pred eEEEEEcccccccCCC---CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCC-Cce--EEE-
Confidence 4699999999999987 67999999999999999999999986 89999999887666665 544321 123 323
Q ss_pred cCCcCCCcHHHHHHHhhhcCC----CCCcEEEEeCCeec-c-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCC
Q 046608 80 ETEPLGTAGPLALARDKLIDD----SGEPFFVLNSDVIS-E-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEET 153 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~----~~~~~lv~~~D~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~ 153 (256)
....|+++++..++..+... ..+.+++++||+.+ + ..++++++.+.+.+. ..+.+.+..++. ...++
T Consensus 79 -~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~-~~~~~~~~~~~~-----~~~~~ 151 (231)
T 1vgw_A 79 -NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAE-GGILAVPVADTL-----KRAES 151 (231)
T ss_dssp -CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTT-CEEEEEECCSCE-----EEESS
T ss_pred -cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCC-eEEEEeecccce-----EEeCC
Confidence 34668899999999887420 11279999999943 3 448899888765542 334444443331 11233
Q ss_pred CCeEeEEeecCCCCCCCe-EEEEEEEeCHhhHHhcccCC--CCcchhhHHHHHhc-CcEEEEEeCceEEecCCHHHHHHH
Q 046608 154 MGKVEKFVEKPKNFVGNK-INAGIYLLNPSVLDRIELKP--TSIEKEVFPEIAVE-NKLFAMVLPGFWMDIGQPKDYITG 229 (256)
Q Consensus 154 ~~~v~~~~ek~~~~~~~~-~~~Giy~~~~~~~~~l~~~~--~~~~~~~~~~l~~~-~~v~~~~~~~~~~di~t~~d~~~a 229 (256)
|.+....++ ... .....++|+.+.+..+.... ..+ .+....+... .++..+..++.|+|||||+||..|
T Consensus 152 -g~i~~~~~~-----~~~~~~~~p~~f~~~~l~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a 224 (231)
T 1vgw_A 152 -GQISATVDR-----SGLWQAQTPQLFQAGLLHRALAAENLGGI-TDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIV 224 (231)
T ss_dssp -SBEEEEECC-----TTEEEEEEEEEEEHHHHHHHHHC----CC-CSHHHHHHTTTCCCEEEECCTTCCCCCSHHHHHHH
T ss_pred -CceEecCCh-----HHheeeeCCcEecHHHHHHHHHHHhhcCC-CcHHHHHHHcCCCEEEEECCccccCcCCHHHHHHH
Confidence 555543321 222 23348889988766542211 111 2222223222 367777777789999999999999
Q ss_pred HHH
Q 046608 230 LRL 232 (256)
Q Consensus 230 ~~~ 232 (256)
+..
T Consensus 225 ~~~ 227 (231)
T 1vgw_A 225 RLL 227 (231)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 37
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.90 E-value=1.3e-24 Score=174.33 Aligned_cols=194 Identities=16% Similarity=0.185 Sum_probs=136.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|++||||||. +||++.....||+|++++|+|||+|+++.+..++. +|+|++.. +.+.+++ ++++
T Consensus 3 ~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~--~~i~~~~-------~~~~----- 66 (232)
T 2dpw_A 3 PSAIVLAGGK-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN--PGLVPAP-------ALTL----- 66 (232)
T ss_dssp CEEEEECCCB-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC--SSCSSCC-------SEEE-----
T ss_pred eeEEEECCCC-CccccccCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh--HHHhhhc-------CeEe-----
Confidence 5899999999 66655444479999999999999999999999988 88887643 2222221 3333
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCee--cccchHHHHHHHHhcCCceEEEEEecCCC-cCceeEEEcCCCCeE
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI--SEYPLKQMIEFHRGHGGEASIMVTKVDEP-SKYGVVVMEETMGKV 157 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~~~v 157 (256)
....|+++++..+++.++ + ++++++||+. ....++++++ + ..++++++.+.+.+++ ..|+.+. ..|
T Consensus 67 ~~~~g~~~~i~~a~~~~~-~---~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~v 135 (232)
T 2dpw_A 67 PDRGGLLENLEQALEHVE-G---RVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEAVEARFPRTK-----RTY 135 (232)
T ss_dssp CCCSSHHHHHHHHHHTCC-S---EEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHHHHHHCTTCC-----CCC
T ss_pred cCCCCHHHHHHHHHHHcC-C---CEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccchhhhCCCcc-----eeE
Confidence 457799999999999886 3 8999999993 4555888888 5 5556677666653222 2333221 356
Q ss_pred eEEeecCCCCCCCeEEEEEEEeCHhhHHhccc------C----------------------CCCcchhhHHHHHh-c-Cc
Q 046608 158 EKFVEKPKNFVGNKINAGIYLLNPSVLDRIEL------K----------------------PTSIEKEVFPEIAV-E-NK 207 (256)
Q Consensus 158 ~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~------~----------------------~~~~~~~~~~~l~~-~-~~ 207 (256)
.++.||| .+++|+|+|+++.+..+.+ + ......++++.+.. . .+
T Consensus 136 ~~~~ek~------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~ 209 (232)
T 2dpw_A 136 ARLREGT------FTGGNLLLLDKSLFRKALPLARRVVALRKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVE 209 (232)
T ss_dssp EEETTEE------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSC
T ss_pred EEEecCc------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcE
Confidence 6676665 4889999999988775531 0 11223566655543 2 47
Q ss_pred EEEEEeC--ceEEecCCHHHHH
Q 046608 208 LFAMVLP--GFWMDIGQPKDYI 227 (256)
Q Consensus 208 v~~~~~~--~~~~di~t~~d~~ 227 (256)
+..+..+ +.|+|||||+||.
T Consensus 210 v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 210 ARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp EEEEECSCGGGTCCCCSHHHHC
T ss_pred EEEEecCChhhccCCCChhhcc
Confidence 8888874 4699999999984
No 38
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.90 E-value=2.4e-23 Score=166.37 Aligned_cols=211 Identities=12% Similarity=0.203 Sum_probs=137.0
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHc-CCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~-~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
.+||||||.|+||+. ..||+|+|++|+|||+|+++.+.++ ++++|+|++++..+.+.+++.. .++..+.+..
T Consensus 6 ~aiIlAaG~g~R~~~---~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~---~~~~~v~~~~- 78 (228)
T 2yc3_A 6 SVILLAGGQGKRMKM---SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEE---SIDVDLSFAI- 78 (228)
T ss_dssp EEEEECCCCC----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTT---TSSSEEEEEC-
T ss_pred EEEEECCccccccCC---CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHH---hCCCcEEEEC-
Confidence 689999999999973 5799999999999999999999998 7999999998876655544432 2234444443
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe-ec-ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV-IS-EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~-~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
...|..+++..+++.+..+ .+.+++++||. ++ ...++++++.+.+++ +++++.+..+. +..++++ +.+.
T Consensus 79 -~~~~~~~sv~~al~~~~~~-~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~~~----~~~~~~~-~~v~ 149 (228)
T 2yc3_A 79 -PGKERQDSVYSGLQEIDVN-SELVCIHDSARPLVNTEDVEKVLKDGSAVG--AAVLGVPAKAT----IKEVNSD-SLVV 149 (228)
T ss_dssp -CCSSHHHHHHHHHTTSCTT-CSEEEEEETTCTTCCHHHHHHHHHHHHHHS--EEEEEEECCSC----CCCBCTT-SCBC
T ss_pred -CCCCHHHHHHHHHHhhccC-CCEEEEecCCCccCCHHHHHHHHHHHHhcC--ceEEEEeccce----EEEEcCC-CceE
Confidence 2367889999999988642 22789999998 33 445889998877654 34545554332 1122443 4555
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHh-cc---cCCCCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDR-IE---LKPTSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~-l~---~~~~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~a~~~~ 233 (256)
++.+++ ........|+|+.+.+.. +. .+...+ .+..+.+.+.+ ++..+.....|+|||||+||..|+..+
T Consensus 150 ~~~~~~----~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~-~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l 224 (228)
T 2yc3_A 150 KTLDRK----TLWEMQTPQVIKPELLKKGFELVKSEGLEV-TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 224 (228)
T ss_dssp CCCSCC----CCEEEEEEEEECHHHHHHHHHHHHHHTCCC-CSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred EecCcc----ceEEEeCCcEEEHHHHHHHHHHHHhcCCCc-ccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHH
Confidence 432221 112233489999765543 22 222222 45555555555 676555555799999999999998755
No 39
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=1.3e-22 Score=158.37 Aligned_cols=184 Identities=22% Similarity=0.293 Sum_probs=121.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|++||||||.|+||++ .||+|++++|+|||+|+++.+.++++++|+|+++++.+.+.+++..... +...+.+. +
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~-~~~~~~~~-~ 74 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYK-DYKNIVVI-D 74 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTT-TTTEEEE---
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhcc-CCCCEEEE-E
Confidence 8999999999999986 6999999999999999999999999999999999988888888876211 11123322 3
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHh-----cCCceEEEEEecCCCcCceeEEEcCC
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRG-----HGGEASIMVTKVDEPSKYGVVVMEET 153 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~v~~~~~ 153 (256)
....|+++++..+++.+ .+ .++++.||+.+ ...++++++.+.+ .+.+..+.+.+..... +.
T Consensus 75 ~~~~g~~~si~~al~~~-~~---~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~~- 142 (196)
T 3rsb_A 75 TSGKGYIEDLNECIGYF-SE---PFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPKEKYP-------NP- 142 (196)
T ss_dssp ------CCCCCTTTTTC-SS---CEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEETTTCC-------SC-
T ss_pred CCCCCcHHHHHHHHHhC-CC---CEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEccccC-------CC-
Confidence 45778889999999888 33 79999999943 4568999998876 5566666666654322 11
Q ss_pred CCeEeEEeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcCcEEEEEeCceEEecCCHHHHHHHHHHH
Q 046608 154 MGKVEKFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVENKLFAMVLPGFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 154 ~~~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~di~t~~d~~~a~~~~ 233 (256)
|.... .+...++..++.+. . ......+.+++..+|||||+||..|+..+
T Consensus 143 ----------~~~~~-~~~~~~l~~l~~~~----~----------------~~~~~~~~~~~~~~DIDt~eDl~~ae~ll 191 (196)
T 3rsb_A 143 ----------SIDFN-GLVPADINVVSPKH----G----------------YQKEEIMVIDELIFNINTKDDLKLAEMLL 191 (196)
T ss_dssp ----------SCCSS-SEEEEEEEEECSCS----S----------------CCCEEEEECSSCCEECCSHHHHHHHHHCC
T ss_pred ----------Ceeec-cccceeeEEecCCC----C----------------cceeEEEEecceEEecCCHHHHHHHHHHH
Confidence 11111 24445666666544 0 01112233335678999999999997654
No 40
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.89 E-value=1.9e-21 Score=151.93 Aligned_cols=185 Identities=14% Similarity=0.208 Sum_probs=129.6
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.|+||++ ||+|++++|+|||+|+++.+..+++++|+|++++..+.+.+++..+ +++++.. +.
T Consensus 7 ~~iIlA~G~~~R~g~-----~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~~----~~~~~~~-~~ 76 (199)
T 2waw_A 7 TGVVLAAGYSRRLGT-----PKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVELD----GLDIVLV-DD 76 (199)
T ss_dssp EEEEEESSCCTTTTS-----CGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCCT----TSEEEEC-CC
T ss_pred EEEEECCCCCCCCCC-----CEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC----CCEEEEC-CC
Confidence 689999999999964 8999999999999999999999999999999988776666655432 5666553 33
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEeE
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVEK 159 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~ 159 (256)
...|+++++..+++.+... .+.+++++||+.+ ...++++++. ++++++++... + ++-
T Consensus 77 ~~~g~~~~i~~al~~~~~~-~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~-------------~---g~~-- 135 (199)
T 2waw_A 77 AGLGCSSSLKSALTWVDPT-AEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY-------------A---NGI-- 135 (199)
T ss_dssp CCTTCCCHHHHHHHTSCTT-CSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE-------------T---TEE--
T ss_pred cccCHHHHHHHHHHhhhcc-CCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec-------------C---Ccc--
Confidence 4578999999999988421 1289999999955 4558888876 34444332111 1 210
Q ss_pred EeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcC-cEEEEEeC-ceEEecCCHHHHHHHHHHH
Q 046608 160 FVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVEN-KLFAMVLP-GFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 160 ~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~v~~~~~~-~~~~di~t~~d~~~a~~~~ 233 (256)
..-++|+++.+..+...... ......+.+.+ ++..+..+ +.|.|||||+||..++..+
T Consensus 136 --------------~~P~~~~~~~l~~~~~~~~~--~~~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 136 --------------GHPFWVSRGVFGDLAELHGD--KGVWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp --------------EEEEEEEGGGHHHHHTCSST--TCHHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred --------------cCCEEEcHHHHHHHHhcCCC--HHHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 01247788887776532111 12222222223 67777764 4899999999999998755
No 41
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.88 E-value=1.2e-21 Score=157.23 Aligned_cols=210 Identities=12% Similarity=0.083 Sum_probs=134.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChHHH-HHHHHhhhhccCcEEEee
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVM-LNFLKEFEKKLEIKITCS 78 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~~i-~~~~~~~~~~~~~~v~~~ 78 (256)
|.|||||||.|+||+. ..||+|++++|+|||+|+++.+..++ +++|+|++++....+ .+++. ++..+..
T Consensus 14 ~~aiILAaG~s~Rm~~---~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~-----~~~~~~~- 84 (234)
T 1vpa_A 14 NVAILLAAGKGERMSE---NVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF-----HEKVLGI- 84 (234)
T ss_dssp EEEEEEECCCCGGGCC---SSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC-----CTTEEEE-
T ss_pred CeEEEEcCcchhhcCC---CCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc-----cCCceEE-
Confidence 5799999999999974 56999999999999999999999998 899999998765432 32221 1222221
Q ss_pred ccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCee-cc-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCe
Q 046608 79 QETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SE-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGK 156 (256)
Q Consensus 79 ~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~ 156 (256)
...+.+..+++..++..+.....+.+++++||+. .. ..++++++.+...+ +.+.+.+..++ ....+.+ |
T Consensus 85 -~~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~~~~~~~~----~~~~~~~-g- 155 (234)
T 1vpa_A 85 -VEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATLALKNSDA----LVRVEND-R- 155 (234)
T ss_dssp -EECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEEEEECCSE----EEEEETT-E-
T ss_pred -eCCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEEecCCc----EEEECCC-C-
Confidence 1223346678999998884311127888899994 33 45888888776543 34444444332 2223555 5
Q ss_pred EeEEeecCCCCCCCeE-EEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHHHHHH
Q 046608 157 VEKFVEKPKNFVGNKI-NAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYITGLRLYL 234 (256)
Q Consensus 157 v~~~~ek~~~~~~~~~-~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~a~~~~~ 234 (256)
+ .+.++. ... .-...+|+.+.+..+...... ..+....+...+ ++..+..++.|+|||||+||..|++.+.
T Consensus 156 v-~~~~r~-----~~~~~~~p~~f~~~~l~~~~~~~~~-~~~~~~~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 228 (234)
T 1vpa_A 156 I-EYIPRK-----GVYRILTPQAFSYEILKKAHENGGE-WADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIAR 228 (234)
T ss_dssp E-EEECCT-----TEEEEEEEEEEEHHHHHHHHTTCCC-CSSSHHHHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHHH
T ss_pred c-ccCChh-----HeeeecCCccccHHHHHHHHHhcCC-CCcHHHHHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHHh
Confidence 5 554421 222 113447787776655332221 123333333333 6767776668999999999999987654
Q ss_pred h
Q 046608 235 D 235 (256)
Q Consensus 235 ~ 235 (256)
.
T Consensus 229 ~ 229 (234)
T 1vpa_A 229 E 229 (234)
T ss_dssp H
T ss_pred c
Confidence 3
No 42
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.87 E-value=2.5e-21 Score=151.11 Aligned_cols=184 Identities=14% Similarity=0.202 Sum_probs=125.3
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.+||||||.|+||+ .||+|++++|+|||+|+++.+.++++++|+|++++..+.+.+++..+ +++++.. +
T Consensus 6 ~~~iIlA~G~~~R~g-----~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~~----~~~~~~~-~ 75 (197)
T 2wee_A 6 ITGVVLAAGRSNRLG-----TPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGAASAVRAAMALD----GTDVVVV-E 75 (197)
T ss_dssp EEEEEEECCCCTTTS-----SCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCCT----TSEEEEC-C
T ss_pred eEEEEECCCCcccCC-----CCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhccC----CCEEEEC-C
Confidence 368999999999995 48999999999999999999999999999999988776666655432 5666543 2
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
....|+++++..+++.+... .+.+++++||+.+ ...++++++. +.++++++... + ++.
T Consensus 76 ~~~~g~~~~i~~al~~~~~~-~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~-------------~---g~~- 135 (197)
T 2wee_A 76 DVERGCAASLRVALARVHPR-ATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY-------------A---DGV- 135 (197)
T ss_dssp ----CCHHHHHHHHTTSCTT-EEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE-------------T---TEE-
T ss_pred CcccCHHHHHHHHHHHhccc-CCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec-------------C---CCc-
Confidence 23568999999999988411 1279999999944 3457888876 33333322110 1 211
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhc-C-cEEEEEeC-ceEEecCCHHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVE-N-KLFAMVLP-GFWMDIGQPKDYITGLRL 232 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~-~-~v~~~~~~-~~~~di~t~~d~~~a~~~ 232 (256)
. .-.+|+++.+..+.... - ..-+..++.. + ++..+..+ +.|.|||||+||..++..
T Consensus 136 ---~------------~P~~~~~~~l~~l~~~~--~-~~~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~~ 194 (197)
T 2wee_A 136 ---G------------HPFWFSRTVFGELARLH--G-DKGVWKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLES 194 (197)
T ss_dssp ---E------------EEEEEEGGGHHHHHTCC--S-TTHHHHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHTC
T ss_pred ---C------------CCEEECHHHHHHHHhCC--C-ChhHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHH
Confidence 0 01377788877765211 1 1122333333 3 57777763 589999999999988653
No 43
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.87 E-value=1.9e-21 Score=156.16 Aligned_cols=215 Identities=15% Similarity=0.130 Sum_probs=134.9
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCChHHHHHHHHhhhhccCcEEEeec
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
|.+||||||.|+||+. ..||+|++++|+|||+|+++.+.+++ +++|+|++++..+.+.+ +..++. ..+.+ ..
T Consensus 8 ~~~iIlA~G~g~R~~~---~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~-~~v~~--~~ 80 (236)
T 1i52_A 8 VCAVVPAAGFGRRMQT---ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPLANH-PQITV--VD 80 (236)
T ss_dssp EEEEEEECCCCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGGGGC-TTEEE--EE
T ss_pred eeEEEECCcCccccCC---CCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHhcCC-CCEEE--EC
Confidence 4789999999999973 57999999999999999999999987 89999999876555544 333211 02322 22
Q ss_pred cCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-c-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeE
Q 046608 80 ETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-E-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKV 157 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v 157 (256)
...|..+++..++..+... +.+++++||+.+ + ..++++++.+.+.+..+ +.+.+..+. ....+++.+.+
T Consensus 81 --~~~g~~~~i~~al~~~~~~--~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~i 151 (236)
T 1i52_A 81 --GGDERADSVLAGLKAAGDA--QWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVRDT----MKRAEPGKNAI 151 (236)
T ss_dssp --CCSSHHHHHHHHHHTSTTC--SEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECCSC----EEEECTTSSSE
T ss_pred --CCCCHHHHHHHHHHhcCCC--CEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecccc----EEEEcCCCCce
Confidence 2357889999999888522 279999999943 4 34788887765554233 333343332 11123221344
Q ss_pred eEEeecCCCCCCCeEEEEEEEeCHhhHHhcc----cCCCCcchhhHHHHHhc-CcEEEEEeCceEEecCCHHHHHHHHHH
Q 046608 158 EKFVEKPKNFVGNKINAGIYLLNPSVLDRIE----LKPTSIEKEVFPEIAVE-NKLFAMVLPGFWMDIGQPKDYITGLRL 232 (256)
Q Consensus 158 ~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~----~~~~~~~~~~~~~l~~~-~~v~~~~~~~~~~di~t~~d~~~a~~~ 232 (256)
....+ ..+-+..-+.++|+.+.+..+. .....+ .+....+... .++..+..++.|+|||||+||..|+..
T Consensus 152 ~~~~~----~~~i~~~~~p~~f~~~~l~~~~~~~~~~g~~~-td~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~ 226 (236)
T 1i52_A 152 AHTVD----RNGLWHALTPQFFPRELLHDCLTRALNEGATI-TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFY 226 (236)
T ss_dssp EEEEC----CTTCEEEEEEEEEEHHHHHHHHHHHHHTTCCC-CSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHH
T ss_pred eeccC----hHhheeeeCCceecHHHHHHHHHHHHhcCCCc-ccHHHHHHHcCCCEEEEecCccccccCCHHHHHHHHHH
Confidence 43321 1111222256677776554321 122222 2222223222 377778877789999999999999887
Q ss_pred HHhh
Q 046608 233 YLDF 236 (256)
Q Consensus 233 ~~~~ 236 (256)
+..+
T Consensus 227 ~~~~ 230 (236)
T 1i52_A 227 LTRT 230 (236)
T ss_dssp HCC-
T ss_pred HHHh
Confidence 6443
No 44
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.87 E-value=3.9e-21 Score=153.41 Aligned_cols=209 Identities=18% Similarity=0.168 Sum_probs=144.9
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcC-CCEEEEEccCCh-HHHHHHHHhhhhccCcEEEeec
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVG-VTEVVLAINYQP-EVMLNFLKEFEKKLEIKITCSQ 79 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~-i~~i~vv~~~~~-~~i~~~~~~~~~~~~~~v~~~~ 79 (256)
.+||||||.|+||+. ..||+|++++|+|||+|+++.+.+++ +++|+|+++++. +.+.+.+.. ++.+. .
T Consensus 9 ~aIIlAaG~g~Rmg~---~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~-----~v~~v--~ 78 (231)
T 3q80_A 9 VAIVPAAGSGERLAV---GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-----RAMIV--A 78 (231)
T ss_dssp EEEEECCCCCTTTCS---SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG-----GCEEE--E
T ss_pred EEEEECCCCCccCCC---CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC-----CeEEE--c
Confidence 589999999999975 67999999999999999999999985 899999998775 445544432 34333 2
Q ss_pred cCCcCCCcHHHHHHHhhhcCC-CCCcEEEEeCCeec--ccchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCe
Q 046608 80 ETEPLGTAGPLALARDKLIDD-SGEPFFVLNSDVIS--EYPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGK 156 (256)
Q Consensus 80 ~~~~~g~~~s~~~~~~~i~~~-~~~~~lv~~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~ 156 (256)
.+.+..+++..++..+... ..+.+++++||..+ ...++++++.+.+ +.++++.+.+..++-.+ .+++ |.
T Consensus 79 --gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~dt~~~----~~~~-g~ 150 (231)
T 3q80_A 79 --GGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLSDTIKA----VDAN-GV 150 (231)
T ss_dssp --CCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCSSCEEE----ECTT-SB
T ss_pred --CCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEeccCCEEE----EcCC-Cc
Confidence 2234568999999998752 12389999999944 3458899888765 24577777777665433 3555 77
Q ss_pred EeEEeecCCCCCCCeEEE-EEEEeCHhhHHhcc----cC-CCCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHHH
Q 046608 157 VEKFVEKPKNFVGNKINA-GIYLLNPSVLDRIE----LK-PTSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYITG 229 (256)
Q Consensus 157 v~~~~ek~~~~~~~~~~~-Giy~~~~~~~~~l~----~~-~~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~a 229 (256)
|.++.+. +.++.+ ..++|+.+.+.... .+ ......|....+...| ++..++-+..++.|+||+||..|
T Consensus 151 v~~~~~r-----~~l~~~qTPq~F~~~~L~~a~~~~~~~n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~a 225 (231)
T 3q80_A 151 VLGTPER-----AGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLA 225 (231)
T ss_dssp EEECCCG-----GGEEEECSCEEEEHHHHHHHHHHHTC-----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHH
T ss_pred EEEecch-----hheEEEcCCcEEEHHHHHHHHHHHHhhcCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHH
Confidence 7666432 222211 25788877766442 11 1122356666666656 78777776678999999999999
Q ss_pred HHHH
Q 046608 230 LRLY 233 (256)
Q Consensus 230 ~~~~ 233 (256)
+..+
T Consensus 226 e~~l 229 (231)
T 3q80_A 226 QAIV 229 (231)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8754
No 45
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.87 E-value=1.2e-20 Score=163.77 Aligned_cols=231 Identities=15% Similarity=0.176 Sum_probs=164.6
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeC-CcchHHHHHHHHHHc----C--CCEEEEEccCChHHHHHHHHhhhhccCc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAV----G--VTEVVLAINYQPEVMLNFLKEFEKKLEI 73 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~-g~pli~~~l~~l~~~----~--i~~i~vv~~~~~~~i~~~~~~~~~~~~~ 73 (256)
|.+||||||.||||+. ..||+|+|+. |+|+|+++++++... | +..+++.+.+..+.+.+++++. +.+++
T Consensus 80 ~~vviLAGGlGTRLg~---~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~-~~fG~ 155 (469)
T 2icy_A 80 LVVLKLNGGLGTTMGC---TGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY-TNSNV 155 (469)
T ss_dssp EEEEEEECCBSGGGTC---CSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG-TTSSS
T ss_pred ceEEEEcCCccccCCC---CCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc-ccCCc
Confidence 5689999999999965 7899999998 999999999999887 5 5655666666688999999874 45677
Q ss_pred EEEee------------------------ccCCcCCCcHHHHHH-----HhhhcCCCCCcEEEEeCCeecccchHHHHHH
Q 046608 74 KITCS------------------------QETEPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDVISEYPLKQMIEF 124 (256)
Q Consensus 74 ~v~~~------------------------~~~~~~g~~~s~~~~-----~~~i~~~~~~~~lv~~~D~~~~~~~~~~~~~ 124 (256)
++.+. .++.+.|+++.+... ++.+...+.++++|+.+|++.......++.+
T Consensus 156 ~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll~~ 235 (469)
T 2icy_A 156 DIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKH 235 (469)
T ss_dssp CEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHHHH
T ss_pred eEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHHHH
Confidence 77754 234688999888754 3444322223899999999765433478889
Q ss_pred HHhcCCceEEEEEecCCC-cCceeEEEcCCCCeEeEEeecCCC--------CCCCeEEEEEEEeCHhhHHhcccC-----
Q 046608 125 HRGHGGEASIMVTKVDEP-SKYGVVVMEETMGKVEKFVEKPKN--------FVGNKINAGIYLLNPSVLDRIELK----- 190 (256)
Q Consensus 125 ~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~~~v~~~~ek~~~--------~~~~~~~~Giy~~~~~~~~~l~~~----- 190 (256)
|.++++++++.+++..++ ..+|.+...++..++.++.|+|.. ..-+..|+|+|+|+.++++.+.++
T Consensus 236 ~~~~~a~~t~~v~~k~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~~~~L~~i~~~~~~~l 315 (469)
T 2icy_A 236 LIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADALKM 315 (469)
T ss_dssp HHHHTCSEEEEEEECCTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEEHHHHHHHHHTTCCCC
T ss_pred HHHcCCCeeEEEEEeccCCCceeEEEEECCEEEEEEEeccChhhhhhhccccccceeeEEEEEEcHHHHHHHHhcccCCc
Confidence 999999999999888776 578887754311235666676643 123578999999999998877432
Q ss_pred -------------CCCcchhhHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHHHHHh
Q 046608 191 -------------PTSIEKEVFPEIAVENKLFAMVLP-GFWMDIGQPKDYITGLRLYLD 235 (256)
Q Consensus 191 -------------~~~~~~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~~~a~~~~~~ 235 (256)
...++.-+.+.+..-....++.+. ..|.++.++.|++.+...++.
T Consensus 316 p~~v~~K~id~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~~dll~~~s~l~~ 374 (469)
T 2icy_A 316 EIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLYT 374 (469)
T ss_dssp CCBCCEEEETTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHHHHHHSTTEE
T ss_pred hhhccceecCCCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCHHHHHHHHHHHHH
Confidence 122222223222222344455443 379999999999999886443
No 46
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.85 E-value=3.1e-21 Score=154.99 Aligned_cols=198 Identities=15% Similarity=0.093 Sum_probs=122.3
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.|+||++ . ||+|++++|+|||+|+++. ..++++|+|++++. +.+ +.. .++.+ ..
T Consensus 27 ~aiILAgG~s~Rm~~---~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~~---~~~-~~~----~~v~~--~~-- 88 (236)
T 2px7_A 27 SVLIPAAGNGLRLGR---G-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPPG---AEP-PKG----LGAVF--LE-- 88 (236)
T ss_dssp EEEEECCC----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECTT---CCC-CTT----CSCEE--EE--
T ss_pred EEEEEcCCCCccCCC---C-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCHH---HHH-hhc----CCcEE--Ee--
Confidence 399999999999985 4 8999999999999999999 66799999999761 211 211 13433 22
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCee-cc-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEeE
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SE-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVEK 159 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~ 159 (256)
...|...++..++..+..+ .+++++||+. ++ ..+.++++.+.+.+ +.+.+.+..++..+ .+ + |++..
T Consensus 89 ~~~~~~~~i~~al~~~~~~---~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~~~~~~----~~-~-G~v~~ 157 (236)
T 2px7_A 89 GGATRQASVARLLEAASLP---LVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPVPDTLMA----PE-G-EAYGR 157 (236)
T ss_dssp CCSSHHHHHHHHHHHCCSS---EEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEECCSEEEE----EC-S-SSCEE
T ss_pred CCCchHHHHHHHHHHcCCC---eEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEecCCcEEE----ec-C-CeEEe
Confidence 2346788999999888643 7999999984 34 44888888776553 44444444332211 13 4 67766
Q ss_pred EeecCCCCCCCeEEEEEEEeCHhhHHhcc----cCCCCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHHHHH
Q 046608 160 FVEKPKNFVGNKINAGIYLLNPSVLDRIE----LKPTSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 160 ~~ek~~~~~~~~~~~Giy~~~~~~~~~l~----~~~~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~a~~~~ 233 (256)
+.++.. -......++|+++.+..+. .....+ .+....+...+ ++..+..++.|+|||||+||..|+..+
T Consensus 158 ~~~~~~----~~~~~~~~~f~~~~l~~~~~~~~~~g~~~-~d~~~ll~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 231 (236)
T 2px7_A 158 VVPREA----FRLVQTPQGFFTALLREAHAYARRKGLEA-SDDAQLVQALGYPVALVEGEATAFKITHPQDLVLAEALA 231 (236)
T ss_dssp EECGGG----CEEECSCEEEEHHHHHHHHHHHHHHTCCC-SSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred cCChHh----hccccCCeEEcHHHHHHHHHHHHhcCCCc-hhHHHHHHHcCCcEEEEECCccccCCCCHHHHHHHHHHH
Confidence 654321 0111124577776554321 111222 22333333333 677888877899999999999998765
No 47
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.82 E-value=6.6e-19 Score=138.41 Aligned_cols=179 Identities=17% Similarity=0.174 Sum_probs=120.1
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.+||||||.|+||+. ||+|++++|+|||+|+++.+..+ +|+||+++ .+.+..+. ..++++++...
T Consensus 1 m~aiILAgG~s~Rmg~-----~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~-~~~~~~~~----~~~~~~~v~d~- 66 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIGM-----EKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRD-EKQAEKLS----SRYEAEFIWDL- 66 (208)
T ss_dssp CEEEEECCCCCTTTTS-----CGGGCEETTEEHHHHHHHHHTTS---EEEEECSS-HHHHHHHH----TTSCSCEECCT-
T ss_pred CEEEEECCCchhhCCC-----CCcccEECCeeHHHHHHHHhcCC---CEEEEECC-HHHHHHHH----HhcCCeEEecC-
Confidence 8999999999999963 89999999999999999999987 89998864 33333222 22366665433
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-cc-chHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EY-PLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
....|...++..++..+ .+ .+ +++||+.+ +. .++++++.+.+.+.++++.. + |+
T Consensus 67 ~~~~G~~~si~~gl~~~-~~---~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~---~--------------g~-- 122 (208)
T 3ngw_A 67 HKGVGSIAGIHAALRHF-GS---CV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK---H--------------DY-- 122 (208)
T ss_dssp TCCCSHHHHHHHHHHHH-SS---EE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE---S--------------SS--
T ss_pred CCCCChHHHHHHHHHHc-CC---CE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc---C--------------CC--
Confidence 33457889999999999 43 68 99999944 43 47888887765555544322 1 10
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcc----cCCCCcchhhHHHHHhcCcEEEEEeC---------ceEEecCCHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIE----LKPTSIEKEVFPEIAVENKLFAMVLP---------GFWMDIGQPKD 225 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~----~~~~~~~~~~~~~l~~~~~v~~~~~~---------~~~~di~t~~d 225 (256)
..|- +.+++++.+..+. .+.... ..+++...+..+... +.|+|||||+|
T Consensus 123 ---~~Pl----------~al~~~~~~~~l~~~l~~G~~~~-----~~~l~~~~~~~v~~~~~~~~d~~~~~~~ninTpeD 184 (208)
T 3ngw_A 123 ---PEPL----------LAYYAESAADELERAILQGIRKI-----LVPLERLNVVYYPVEKLRKFDKELISFFNINTPDD 184 (208)
T ss_dssp ---BCTT----------EEEECGGGHHHHHHHHHTTCCCT-----HHHHHTSCEEEEEGGGGTTTCTTCGGGCCCCSHHH
T ss_pred ---eeEE----------EEEEcHHHHHHHHHHHHcCCCCH-----HHHHHhCCEEEecHHHhcccCcccceEEecCCHHH
Confidence 0111 2356666655442 222222 233333455566653 35899999999
Q ss_pred HHHHHHHHHh
Q 046608 226 YITGLRLYLD 235 (256)
Q Consensus 226 ~~~a~~~~~~ 235 (256)
|..+++.+.+
T Consensus 185 l~~~~~~~~~ 194 (208)
T 3ngw_A 185 LKRAEEICSK 194 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9999877654
No 48
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.82 E-value=5.9e-20 Score=143.95 Aligned_cols=173 Identities=17% Similarity=0.151 Sum_probs=113.3
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET 81 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~ 81 (256)
.+||||||.|+||+ .||+|++++|+|||+|+++.+..+ +++|+|++++... +.+. +++++.. +.
T Consensus 16 ~~iILA~G~g~Rmg-----~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~------~~~~v~~-~~ 79 (201)
T 2e8b_A 16 TCYVLAGGKSKRFG-----EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK---FSFL------NAPVVLD-EF 79 (201)
T ss_dssp EEEEEEESSCCCCS-----TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG------TCCEEEC-CC
T ss_pred eEEEECCCCCccCC-----CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC------CceEEec-CC
Confidence 69999999999997 489999999999999999999998 8999999987654 1111 4555433 33
Q ss_pred CcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-cc-chHH-HHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 82 EPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-EY-PLKQ-MIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 82 ~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
...|+++++..+++.++.+ .+++++||+.+ +. .+++ ++ . .++++. . . + ++
T Consensus 80 ~~~g~~~~i~~al~~~~~~---~~lv~~~D~P~i~~~~i~~~l~----~--~~~~v~-------------~-~-~-g~-- 132 (201)
T 2e8b_A 80 EESASIIGLYTALKHAKEE---NVFVLSGDLPLMKKETVLYVLE----N--FKEPVS-------------V-A-K-TE-- 132 (201)
T ss_dssp SSCCHHHHHHHHHHHCSSS---EEEEEETTCTTCCHHHHHHHHH----T--CCSSEE-------------E-E-E-SS--
T ss_pred CCCCcHHHHHHHHHHcCCC---CEEEEeCCcCcCCHHHHHHHHh----c--CCEEEE-------------e-c-C-Cc--
Confidence 4679999999999988654 89999999954 43 3555 55 1 222110 0 0 1 21
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhccc---CCCCcchhhHHHHHhcCcEEEEEeC--ceEE--ecCCHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIEL---KPTSIEKEVFPEIAVENKLFAMVLP--GFWM--DIGQPKDYITGLR 231 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~---~~~~~~~~~~~~l~~~~~v~~~~~~--~~~~--di~t~~d~~~a~~ 231 (256)
....+|+| |+++.+..+.. .......++++.+ .+..+.+. +.|+ |||||+||.++++
T Consensus 133 -----------~~p~~giy-~~~~~~~~l~~~~~~g~~~~~~~l~~~----~~~~~~~~~~~~~~~~dintpedl~~~~~ 196 (201)
T 2e8b_A 133 -----------KLHTLVGV-YSKKLLEKIEERIKKGDYRIWALLKDV----GYNEVEIPEELRYTLLNMNTKEDLKRILA 196 (201)
T ss_dssp -----------SEEEEEEE-EEGGGHHHHHHHHHTTCCCHHHHHHHH----CCEEEECCGGGGGGGCCSCCC--------
T ss_pred -----------eeeEEEEE-eChhHHHHHHHHHHcCCchHHHHHHHC----CeEEeccccccchhhcCCCCHHHHHHHHH
Confidence 24578999 99988776642 2222224555442 45556654 4789 9999999998876
Q ss_pred HH
Q 046608 232 LY 233 (256)
Q Consensus 232 ~~ 233 (256)
.+
T Consensus 197 ~~ 198 (201)
T 2e8b_A 197 IE 198 (201)
T ss_dssp --
T ss_pred Hh
Confidence 43
No 49
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.82 E-value=2e-20 Score=146.14 Aligned_cols=181 Identities=19% Similarity=0.221 Sum_probs=112.3
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.+||||||.|+||+. ||+|++++|+|||+|+++.+..+ +++|++++..+.+.+++. .++ ++...
T Consensus 3 ~~~iIlAgG~g~Rmg~-----~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~-----~~~-~v~~~- 67 (197)
T 3d5n_A 3 IGVIILAAGEGKRFGG-----DKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM-----DQI-VIYNP- 67 (197)
T ss_dssp EEEEEECSCCTTCCCS-----SGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT-----TSC-EEECT-
T ss_pred eEEEEECCcCcccCCC-----CeeeCEeCceEHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc-----CCE-EEECC-
Confidence 3689999999999975 89999999999999999999877 888888877555444332 256 44333
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCee-cc-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVI-SE-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~-~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
....|+++++..+++.+...+ .+++++||+. .+ ..++++++.+ +.+.+.++... + ++
T Consensus 68 ~~~~G~~~si~~al~~~~~~~--~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~-------------~---g~-- 126 (197)
T 3d5n_A 68 FWNEGISTSLKLGLRFFKDYD--AVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH-------------K---GE-- 126 (197)
T ss_dssp TGGGCHHHHHHHHHHHTTTSS--EEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE-------------T---TE--
T ss_pred CCCCCHHHHHHHHHHhhccCC--cEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe-------------C---Cc--
Confidence 234689999999999986422 7999999994 34 3477887765 34443332211 1 11
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcC-cEEEEEeC--ceEEecCCHHHHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVEN-KLFAMVLP--GFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~v~~~~~~--~~~~di~t~~d~~~a~~~~ 233 (256)
+..+ .+|+++.+..+..-. -...+...+.+.+ .+..+..+ +.|+|||||+||..++..+
T Consensus 127 -----~~~P---------~~~~~~~l~~l~~l~--g~~~~~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~ 188 (197)
T 3d5n_A 127 -----RGNP---------VLISKSLFNEIEKLR--GDVGARVILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFH 188 (197)
T ss_dssp -----ECSC---------EEEEHHHHHHHHHCC--TTCCTHHHHTTSCGGGEEEEECCGGGTCCTTTC----------
T ss_pred -----ccCC---------EEECHHHHHHHHccC--CCccHHHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhh
Confidence 0111 267777777664211 1122322232323 46666664 3689999999999887654
No 50
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.81 E-value=7.2e-19 Score=153.56 Aligned_cols=224 Identities=17% Similarity=0.256 Sum_probs=154.0
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeC-CcchHHHHHHHHHHc----CCC-EEEEEcc-CChHHHHHHHHhhhhccCc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAV----GVT-EVVLAIN-YQPEVMLNFLKEFEKKLEI 73 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~-g~pli~~~l~~l~~~----~i~-~i~vv~~-~~~~~i~~~~~~~~~~~~~ 73 (256)
|.+||||||.||||+. ..||+|+|++ |+|||+++++++... |.. .++|+++ +..+.+.++++++ ..+++
T Consensus 93 ~avViLAGG~GTRmgs---~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~-~~fg~ 168 (488)
T 2i5k_A 93 LAVLKLNGGLGTSMGC---VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKY-SANRI 168 (488)
T ss_dssp EEEEEECCCBSGGGTC---CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGG-CSSSC
T ss_pred ceEEEEcCCCcccCCC---CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhc-cccCc
Confidence 3579999999999986 7899999998 999999999998877 422 3556565 8889999999874 44577
Q ss_pred EEEeeccC------------------------CcCCCcHHHHHH-----HhhhcCCCCCcEEEEeCCeecc-cchHHHHH
Q 046608 74 KITCSQET------------------------EPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDVISE-YPLKQMIE 123 (256)
Q Consensus 74 ~v~~~~~~------------------------~~~g~~~s~~~~-----~~~i~~~~~~~~lv~~~D~~~~-~~~~~~~~ 123 (256)
++.+..|. .+.|+++++... ++.+.....++++|+++|++.. .++. ++.
T Consensus 169 ~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~L~ 247 (488)
T 2i5k_A 169 RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-ILN 247 (488)
T ss_dssp EEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-HHH
T ss_pred eEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-HHH
Confidence 77766554 788999988732 4555322223899999999664 4565 568
Q ss_pred HHHhcCCceEEEEEecCCCcC-ceeEEEcCCCCe--EeEEeecCCCC--------CCCeEEEEEEEeCHhhHHhcccC-C
Q 046608 124 FHRGHGGEASIMVTKVDEPSK-YGVVVMEETMGK--VEKFVEKPKNF--------VGNKINAGIYLLNPSVLDRIELK-P 191 (256)
Q Consensus 124 ~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~~~--v~~~~ek~~~~--------~~~~~~~Giy~~~~~~~~~l~~~-~ 191 (256)
++..+++++++.+++..++.. ||.+..++ |+ +.++.+.+... .-..+|+|+|+|+.+++..+... .
T Consensus 248 ~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~d--G~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f~~~~L~~~l~~~~ 325 (488)
T 2i5k_A 248 HMIETGAEYIMELTDKTRADVKGGTLISYD--GQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSN 325 (488)
T ss_dssp HHHHSCCSEEEEEEECCGGGSSSCEEEEET--TEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEEEHHHHHHHHHTTC
T ss_pred HHHhcCCcEEEEEEEecCCCCceeEEEEEC--CcEEEEEeccCCHHHHhhcccccccCEEEEEEEEEeHHHHHHHHhhcc
Confidence 888899999999988877765 99887653 55 33443433321 12478999999999888765321 0
Q ss_pred ---------------------CCcc---hhhHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHHHHH
Q 046608 192 ---------------------TSIE---KEVFPEIAVENKLFAMVLP-GFWMDIGQPKDYITGLRLYL 234 (256)
Q Consensus 192 ---------------------~~~~---~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~~~a~~~~~ 234 (256)
..+| .++++.+ + ...++.+. ..|..+-+..|++.++..++
T Consensus 326 ~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~-~--~~~~~~V~R~~F~PvKn~~~ll~~~~~~~ 390 (488)
T 2i5k_A 326 LEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF-D--GAHGVVVPRSRFLPVKTCSDLLLVKSDLF 390 (488)
T ss_dssp CCCCCBCCEECCCC-----CEECCBCCGGGGGGGS-S--SCEEEEECGGGCCBCCSHHHHHHHTSTTE
T ss_pred CCCcceecCccccCCCCCCceEEeeehhhhHHhhc-c--CceEEEecccccccccCCccHHHHHHHHH
Confidence 0111 2333333 1 22233332 26889999988877766543
No 51
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.80 E-value=3.7e-19 Score=139.38 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=83.9
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
|.+||||||.|+||+. .||+|++++|+|||+|+++.+.. ++++|+|++++..+.+ .. .+++++....
T Consensus 7 ~~~iILAgG~s~Rmg~----~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~~~~----~~----~~~~~v~~~~ 73 (201)
T 1e5k_A 7 ITGVVLAGGKARRMGG----VDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQEIY----QA----SGLKVIEDSL 73 (201)
T ss_dssp EEEEEECCCCCSSSCS----SCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSHHHH----HT----TSCCEECCCT
T ss_pred ceEEEEcCCCCCcCCC----CCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcHHHH----hh----cCCeEEecCC
Confidence 3689999999999972 58999999999999999999985 4899999998765332 22 2566554333
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe-ecc-cchHHHHHH
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDV-ISE-YPLKQMIEF 124 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~-~~~-~~~~~~~~~ 124 (256)
+...|++.++..+++.++.+ .+++++||+ +.. ..++++++.
T Consensus 74 ~~~~G~~~si~~~l~~~~~~---~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 74 ADYPGPLAGMLSVMQQEAGE---WFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp TCCCSHHHHHHHHHHHCCSS---EEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhCCCC---cEEEEeCCcCcCCHHHHHHHHhh
Confidence 33378999999999998654 899999999 334 347788775
No 52
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.77 E-value=8.4e-19 Score=148.73 Aligned_cols=194 Identities=14% Similarity=0.131 Sum_probs=125.1
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHH-cCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeecc
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKA-VGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~-~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
.+||||||.|+||+. ..||+|++++|+|||+|+++.+.+ .++++|+|+++ ..+.+.+++. +++++
T Consensus 5 ~aIILAaG~ssRmg~---~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~------~v~~v---- 70 (371)
T 1w55_A 5 SLIMLAAGNSTRFNT---KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTK------NYEFI---- 70 (371)
T ss_dssp EEEEECCSCCTTTCS---SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCS------SSEEE----
T ss_pred EEEEECCCCCccCCC---CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhC------CCEEE----
Confidence 589999999999974 579999999999999999999998 46899999998 4443333221 23333
Q ss_pred CCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-c-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEe
Q 046608 81 TEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-E-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVE 158 (256)
Q Consensus 81 ~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~ 158 (256)
..+.|...++..+++.+..+ .+++++||+.+ + ..++++++.+.+. ++++.+.+..++..+.....+. ..+.
T Consensus 71 ~~g~g~~~sv~~aL~~l~~d---~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~~~~~d~vk~v~~t~~r--~~l~ 143 (371)
T 1w55_A 71 EGGDTRAESLKKALELIDSE---FVMVSDVARVLVSKNLFDRLIENLDKA--DCITPALKVADTTLFDNEALQR--EKIK 143 (371)
T ss_dssp ECCSSHHHHHHHHHTTCCSS---EEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEEECCCSCEEETTEEECG--GGCC
T ss_pred eCCCChHHHHHHHHHhcCCC---eEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEEEEeecCeeeeeeecCc--ccee
Confidence 23456779999999988643 89999999943 3 4488888766554 3444444443321110000010 1111
Q ss_pred EEeecCCCCCCCeEEEEEEEeCHhhHHhcccCCCCcchhhHHHHHhcC-cEEEEEeCceEEecCCHHHHHHHH
Q 046608 159 KFVEKPKNFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPEIAVEN-KLFAMVLPGFWMDIGQPKDYITGL 230 (256)
Q Consensus 159 ~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~v~~~~~~~~~~di~t~~d~~~a~ 230 (256)
.. . ..+.|+.+.+..+...... ..+....+...+ ++..++.++.|+|||||+||..|+
T Consensus 144 ~~-~------------~P~~f~~~~l~~~~~~~~~-~td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 144 LI-Q------------TPQISKTKLLKKALDQNLE-FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp EE-C------------SCEEEEHHHHHHHTSSCCC-CSSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred ec-C------------CcceecHHHHHHHHHhccc-ccCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 11 0 0246777766554322111 233333333334 777777666899999999999987
No 53
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.76 E-value=3.5e-17 Score=143.55 Aligned_cols=183 Identities=20% Similarity=0.256 Sum_probs=135.5
Q ss_pred CeEEEEeCCCCCccccCCCCCCCcccee---CCcchHHHHHHHHHH--------cC----CCEEEEEccCChHHHHHHHH
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDF---ANKPMILHQIEALKA--------VG----VTEVVLAINYQPEVMLNFLK 65 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i---~g~pli~~~l~~l~~--------~~----i~~i~vv~~~~~~~i~~~~~ 65 (256)
|.+||||||.||||+. ..||+|+|+ .|+|+|+++++++.. .| +..+++.+.+..+.+.++++
T Consensus 103 vavViLAGG~GTRLg~---~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~f~ 179 (505)
T 1jv1_A 103 VAVLLLAGGQGTRLGV---AYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFT 179 (505)
T ss_dssp EEEEEECCCCCCTTSC---SSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHHHH
T ss_pred eEEEEEcCCccccCCC---CCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHHHH
Confidence 5789999999999975 789999999 799999999999877 25 77777777777889999998
Q ss_pred hhhhccCc---EEEeecc---------------------CCcCCCcHHHHHHHh-----hhcCCCCCcEEEEeCCee-cc
Q 046608 66 EFEKKLEI---KITCSQE---------------------TEPLGTAGPLALARD-----KLIDDSGEPFFVLNSDVI-SE 115 (256)
Q Consensus 66 ~~~~~~~~---~v~~~~~---------------------~~~~g~~~s~~~~~~-----~i~~~~~~~~lv~~~D~~-~~ 115 (256)
+. +.+++ ++.+..| +.+.|+++.+..+.. .+...+.++++|+.+|++ ..
T Consensus 180 ~~-~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~~ 258 (505)
T 1jv1_A 180 KH-KYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVK 258 (505)
T ss_dssp HT-GGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTCC
T ss_pred hh-hhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCccccc
Confidence 73 34455 2544332 367888887765542 332222228999999996 65
Q ss_pred cchHHHHHHHHhcCCceEEEEEe-cCCCcCceeEEEcCCCCeEeEEeecCCC----------CCCCeEEEEEEEeCHhhH
Q 046608 116 YPLKQMIEFHRGHGGEASIMVTK-VDEPSKYGVVVMEETMGKVEKFVEKPKN----------FVGNKINAGIYLLNPSVL 184 (256)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~v~~~~~~~~v~~~~ek~~~----------~~~~~~~~Giy~~~~~~~ 184 (256)
.....++..+..+++++++.+++ ...+..+|.+..+++..+|.++.++|.. ...+..|+|+|+|+.+++
T Consensus 259 ~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~~f~l~~L 338 (505)
T 1jv1_A 259 VADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFL 338 (505)
T ss_dssp TTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEEEEEHHHH
T ss_pred cchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEECCeEEEEEEeeCCHHHhhhcccccccccceeeEEEEEecHHHH
Confidence 55678889999999999998886 5677889988775321234666666541 113589999999999988
Q ss_pred Hhc
Q 046608 185 DRI 187 (256)
Q Consensus 185 ~~l 187 (256)
+.+
T Consensus 339 ~~i 341 (505)
T 1jv1_A 339 RDV 341 (505)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 54
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.60 E-value=1.3e-14 Score=126.68 Aligned_cols=226 Identities=16% Similarity=0.156 Sum_probs=149.1
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeC-CcchHHHHHHHHHHcC------CCEEEEEccCChHHHHHHHH-hhhhccC
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAVG------VTEVVLAINYQPEVMLNFLK-EFEKKLE 72 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~-g~pli~~~l~~l~~~~------i~~i~vv~~~~~~~i~~~~~-~~~~~~~ 72 (256)
+.+|+||||.||||+. ..||+|+|++ |+|+|+++++++...+ +.-+++.+.+..+.+.++++ +. +.++
T Consensus 76 ~avViLAGGlGTRLg~---~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~-~~fG 151 (505)
T 2oeg_A 76 TVVLKLNGGLGTGMGL---CDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARY-PWLY 151 (505)
T ss_dssp EEEEEEECCCCGGGTC---CSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHC-HHHH
T ss_pred ceEEEEcCCcccccCC---CCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhh-hccC
Confidence 3589999999999985 8899999999 9999999999998875 33444444555888999998 52 2234
Q ss_pred c---EEE-e---------------e-------ccCCcCCCcHHHHHH-----HhhhcCCCCCcEEEEeCCeecc-cchHH
Q 046608 73 I---KIT-C---------------S-------QETEPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDVISE-YPLKQ 120 (256)
Q Consensus 73 ~---~v~-~---------------~-------~~~~~~g~~~s~~~~-----~~~i~~~~~~~~lv~~~D~~~~-~~~~~ 120 (256)
+ ++. + . .++.+.|+++.+... ++.+...+.++++|..+|++.. .|. .
T Consensus 152 l~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~-~ 230 (505)
T 2oeg_A 152 QVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK-R 230 (505)
T ss_dssp TTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-H
T ss_pred CCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-H
Confidence 3 222 1 1 223466998888644 3444322223899999999763 456 8
Q ss_pred HHHHHHhcCCceEEEEEecCCC-cCceeEEEc------CCCCe---------EeEEeecCCCC--------CCCeEEEEE
Q 046608 121 MIEFHRGHGGEASIMVTKVDEP-SKYGVVVME------ETMGK---------VEKFVEKPKNF--------VGNKINAGI 176 (256)
Q Consensus 121 ~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~------~~~~~---------v~~~~ek~~~~--------~~~~~~~Gi 176 (256)
++..+..+++++++.+++...+ ..+|++... .+ |+ +.++.+-|... .-.+.|+..
T Consensus 231 llg~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~~~~~~d-g~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~~Ninn 309 (505)
T 2oeg_A 231 VLAYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKD-GQPDAEKRVLLLRESAQCPKADMESFQDINKYSFFNTNN 309 (505)
T ss_dssp HHHHHHHHTCSEEEEEEECCTTCCSSEEEEEEEEEECCSS-SCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCEEEEEE
T ss_pred HHHHHHhcCCcEEEEEEEecCCccceeEEEEecccccccC-CccccccCceeEEEeccCChhhhhcccCccccCeeEEEE
Confidence 8889999999999999888776 567877662 34 56 44444444321 112589999
Q ss_pred EEeCHhhHHhcccC---CC----------------------Ccc---hhhHHHHHhcCcEEEEEeCc-eEEecCCHHHHH
Q 046608 177 YLLNPSVLDRIELK---PT----------------------SIE---KEVFPEIAVENKLFAMVLPG-FWMDIGQPKDYI 227 (256)
Q Consensus 177 y~~~~~~~~~l~~~---~~----------------------~~~---~~~~~~l~~~~~v~~~~~~~-~~~di~t~~d~~ 227 (256)
.+|+-+++..+.+. .. .+| .++++.+ ..+.++.+.- .|..+-+..|+.
T Consensus 310 ~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~---~~~~~~~V~R~~FsPvKn~~dl~ 386 (505)
T 2oeg_A 310 LWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMF---ESASAIVVPRSRFAPVKTCADLL 386 (505)
T ss_dssp EEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSC---TTCEEEECCGGGCCCCSSHHHHH
T ss_pred EEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhc---CcceEEEeccceeecccCCCCHH
Confidence 99998887754211 00 011 1233322 1233444332 688999999999
Q ss_pred HHHHHHHh
Q 046608 228 TGLRLYLD 235 (256)
Q Consensus 228 ~a~~~~~~ 235 (256)
.++..++.
T Consensus 387 ~~~sdly~ 394 (505)
T 2oeg_A 387 ALRSDAYV 394 (505)
T ss_dssp HHHSTTEE
T ss_pred HHHHHHHh
Confidence 88776554
No 55
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.57 E-value=1.4e-13 Score=116.73 Aligned_cols=181 Identities=22% Similarity=0.230 Sum_probs=132.7
Q ss_pred eEEEEeCCCCCccccCCCCCCCcccee---CCcchHHHHHHHHHH-------------cCCCEEEEEccCChHHHHHHHH
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDF---ANKPMILHQIEALKA-------------VGVTEVVLAINYQPEVMLNFLK 65 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i---~g~pli~~~l~~l~~-------------~~i~~i~vv~~~~~~~i~~~~~ 65 (256)
.+|+||||.||||+. ..||+|+|+ .|+|++++.++++.+ .++..+++.+.+..+.+.++++
T Consensus 37 avvlLAGG~GTRLG~---~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~~~f~ 113 (405)
T 3oc9_A 37 ALITPAGGQGSRLGF---EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEINNYFK 113 (405)
T ss_dssp EEEEECCSBCTTTTC---CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHHHHHH
T ss_pred EEEEecCCCcccccC---CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHHHHHH
Confidence 478999999999976 789999999 899999999988864 4677677777777899999998
Q ss_pred hhhhccCc---EEEeec---------------------cCCcCCCcHHHHHHH-----hhhcCCCCCcEEEEeCCe-ecc
Q 046608 66 EFEKKLEI---KITCSQ---------------------ETEPLGTAGPLALAR-----DKLIDDSGEPFFVLNSDV-ISE 115 (256)
Q Consensus 66 ~~~~~~~~---~v~~~~---------------------~~~~~g~~~s~~~~~-----~~i~~~~~~~~lv~~~D~-~~~ 115 (256)
+. +.+++ .+.+.. .+.+.|+++.+.... +.+...+-+++.+...|+ +..
T Consensus 114 ~~-~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~L~~ 192 (405)
T 3oc9_A 114 EH-QYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNILCK 192 (405)
T ss_dssp HT-GGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBTTCC
T ss_pred hC-cccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCcccc
Confidence 73 33444 244322 345677776665432 223332223899999999 666
Q ss_pred cchHHHHHHHHhcCCceEEEEEecCCC-cCceeEEE-cCCCCeEeEEeecCCCC---------CCCeEEEEEEEeCHhhH
Q 046608 116 YPLKQMIEFHRGHGGEASIMVTKVDEP-SKYGVVVM-EETMGKVEKFVEKPKNF---------VGNKINAGIYLLNPSVL 184 (256)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~-~~~~~~v~~~~ek~~~~---------~~~~~~~Giy~~~~~~~ 184 (256)
...-.++..+..+++++++-+++..++ ...|.+.. |+. .+|.++.+.|... .-+..|+++++|+.+++
T Consensus 193 ~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~dg~-~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~fs~~fL 271 (405)
T 3oc9_A 193 DVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQER-IKVVEYTELTDELNKQLSNGEFIYNCGHISINGYSTSFL 271 (405)
T ss_dssp SSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTE-EEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEEEEHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEECCe-eEEEEEeeCCHHHhhcCCCCceeeccceeEeeecCHHHH
Confidence 666788899999999999988888776 77887764 433 4788888866531 12367899999999999
Q ss_pred Hhc
Q 046608 185 DRI 187 (256)
Q Consensus 185 ~~l 187 (256)
+.+
T Consensus 272 ~~i 274 (405)
T 3oc9_A 272 EKA 274 (405)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
No 56
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.54 E-value=1e-13 Score=121.23 Aligned_cols=180 Identities=17% Similarity=0.212 Sum_probs=128.4
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeC---CcchHHHHHHHHHHc--------C------CCEEEEEccCChHHHHHH
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFA---NKPMILHQIEALKAV--------G------VTEVVLAINYQPEVMLNF 63 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~---g~pli~~~l~~l~~~--------~------i~~i~vv~~~~~~~i~~~ 63 (256)
|.+|+||||.||||+. ..||+|+|++ |+|+++++++++... | +..+++.+++..+.+.++
T Consensus 104 vavvlLaGG~GTRLg~---~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~~~ 180 (486)
T 2yqc_A 104 VAVLLMAGGQGTRLGS---SAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESF 180 (486)
T ss_dssp EEEEEEEESBCGGGTC---SSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHHHH
T ss_pred eEEEEEcCCccccCCC---CCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHHHH
Confidence 4689999999999965 7899999999 999999999999876 5 777888888888889999
Q ss_pred HHhhhhccCc---EEEeecc----------------------CCcCCCcHHHHHH-----HhhhcCCCCCcEEEEeCCee
Q 046608 64 LKEFEKKLEI---KITCSQE----------------------TEPLGTAGPLALA-----RDKLIDDSGEPFFVLNSDVI 113 (256)
Q Consensus 64 ~~~~~~~~~~---~v~~~~~----------------------~~~~g~~~s~~~~-----~~~i~~~~~~~~lv~~~D~~ 113 (256)
+++. +.+++ .+.+..| +.+.|+++.+... ++.+...+-+++.+...|.+
T Consensus 181 ~~~~-~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~ 259 (486)
T 2yqc_A 181 FIEN-NYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNC 259 (486)
T ss_dssp HHHT-GGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTBT
T ss_pred Hhhc-cccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCCc
Confidence 9863 33343 2221111 2466887766544 22332222237888999984
Q ss_pred cc--cchHHHHHHHHhcCCceEEEEEecCCC-cCceeEEEcC-CCC--eEeEEeecCCC------C------CCCeEEEE
Q 046608 114 SE--YPLKQMIEFHRGHGGEASIMVTKVDEP-SKYGVVVMEE-TMG--KVEKFVEKPKN------F------VGNKINAG 175 (256)
Q Consensus 114 ~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~-~~~--~v~~~~ek~~~------~------~~~~~~~G 175 (256)
.- .| -.++..+..+++++++.+++..++ ...|.+.... + | .|.++.|+|.. . .-+..|+|
T Consensus 260 l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~d-g~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~~Ni~ 337 (486)
T 2yqc_A 260 LVKVAD-PIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDN-QKPCVIEYSEISQELANKKDPQDSSKLFLRAANIV 337 (486)
T ss_dssp TCCTTC-HHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTT-TEEEEECGGGSCHHHHHCEETTEEEEESSCEEEEE
T ss_pred eeeccC-HHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecC-CCEEEEEEecCCHHHhhcccccccccccccceeEE
Confidence 43 23 346778888899999888776444 6778776441 3 4 47888887641 1 13588999
Q ss_pred EEEeCHhhHHh
Q 046608 176 IYLLNPSVLDR 186 (256)
Q Consensus 176 iy~~~~~~~~~ 186 (256)
.|+|+.++++.
T Consensus 338 ~~~~~l~~L~~ 348 (486)
T 2yqc_A 338 NHYYSVEFLNK 348 (486)
T ss_dssp EEEEEHHHHHH
T ss_pred EEEEeHHHHHH
Confidence 99999999877
No 57
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.49 E-value=2.6e-06 Score=74.30 Aligned_cols=224 Identities=17% Similarity=0.215 Sum_probs=129.5
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeC-CcchHHHHHHHHHHc----C--CCEEEEEcc-CChHHHHHHHHhhhhccCc
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFA-NKPMILHQIEALKAV----G--VTEVVLAIN-YQPEVMLNFLKEFEKKLEI 73 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~-g~pli~~~l~~l~~~----~--i~~i~vv~~-~~~~~i~~~~~~~~~~~~~ 73 (256)
-+|+||||.|+||+. ..||.++++. |+++++..++++... | +. .+|.++ ...+.+.++++++ ..++.
T Consensus 129 avvlLaGGlGTRLG~---~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IP-l~IMTS~~T~~~T~~~f~k~-~~fg~ 203 (528)
T 3r3i_A 129 VVVKLNGGLGTSMGC---KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVP-LVLMNSFNTDEDTKKILQKY-NHCRV 203 (528)
T ss_dssp EEEEECCCBCTTTTC---SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCC-EEEEECTTTHHHHHSSCGGG-TTSSC
T ss_pred EEEEeCCCCccccCC---CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCC-EEEEeccchhHHHHHHHHhc-CccCC
Confidence 468889999999977 7899999995 999999999988765 3 44 444454 5577888888764 33454
Q ss_pred EEEeecc---------------------------CCcCCCcHHHHH-----HHhhhcCCCCCcEEEEeCCeecccchHHH
Q 046608 74 KITCSQE---------------------------TEPLGTAGPLAL-----ARDKLIDDSGEPFFVLNSDVISEYPLKQM 121 (256)
Q Consensus 74 ~v~~~~~---------------------------~~~~g~~~s~~~-----~~~~i~~~~~~~~lv~~~D~~~~~~~~~~ 121 (256)
++.+..| +.+.|.++-+.. .++.+...+-+++.+...|.+.-.-=-.+
T Consensus 204 ~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp~~ 283 (528)
T 3r3i_A 204 KIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYI 283 (528)
T ss_dssp CEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCHHH
T ss_pred CeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCHHH
Confidence 4443333 123444432221 13344333334899999999543211234
Q ss_pred HHHHHhc----CCceEEEEEecCCCcC-ceeEEEcCCCCeEeEEeecCCCC--------CCCeEEEEEEEeCHhhHHhcc
Q 046608 122 IEFHRGH----GGEASIMVTKVDEPSK-YGVVVMEETMGKVEKFVEKPKNF--------VGNKINAGIYLLNPSVLDRIE 188 (256)
Q Consensus 122 ~~~~~~~----~~~~~i~~~~~~~~~~-~~~v~~~~~~~~v~~~~ek~~~~--------~~~~~~~Giy~~~~~~~~~l~ 188 (256)
+.....+ +++..+-+++...+.. -|.+...++.-.+.++.+-|... .=.+.|+...+|+-++++.+.
T Consensus 284 Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~~L~~L~~v~ 363 (528)
T 3r3i_A 284 LNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQ 363 (528)
T ss_dssp HHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECSSSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEEEHHHHHHHH
T ss_pred HHHHHhcccccCCcEEEEEeEccccCCcccEEEEECCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEEEHHHHHHHH
Confidence 5555555 7777776655444433 34443322112455555544311 112578999999988887653
Q ss_pred cCC-------------------CCcc---hhhHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHHHH
Q 046608 189 LKP-------------------TSIE---KEVFPEIAVENKLFAMVLP-GFWMDIGQPKDYITGLRLY 233 (256)
Q Consensus 189 ~~~-------------------~~~~---~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~~~a~~~~ 233 (256)
+.. ..++ .++++.. ....++.+. ..|..+-+..|++..+..+
T Consensus 364 ~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f---~~~~~i~VpR~rF~PvKn~sdLll~~Sdl 428 (528)
T 3r3i_A 364 EQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF---ENSLGINVPRSRFLPVKTTSDLLLVMSNL 428 (528)
T ss_dssp HTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS---SSCCCEECCGGGCCBCCSHHHHHHHHSTT
T ss_pred HhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc---cCcEEEEEehHHcccccchHHHHHHhcce
Confidence 211 0111 1222222 122233332 2588999999998776544
No 58
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=98.30 E-value=1e-06 Score=68.84 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=72.2
Q ss_pred CeEEEEe--CCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEE-EEEccCChHHHHHHHHhhhhccCcEEEe
Q 046608 1 MKALILV--GGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEV-VLAINYQPEVMLNFLKEFEKKLEIKITC 77 (256)
Q Consensus 1 m~aiIla--aG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i-~vv~~~~~~~i~~~~~~~~~~~~~~v~~ 77 (256)
|.+||++ +...|||.+ ...+......++||++|+++.+..++++.+ ++++++.. + ..+ .++.++.
T Consensus 4 ~~~vip~k~g~~KtRL~~---~l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~--~----~~~---~~~~~v~ 71 (211)
T 2i5e_A 4 MRAVIPYKKAGAKSRLSP---VLSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG--L----EEM---TEARVLL 71 (211)
T ss_dssp CEEEEECCCTTTTGGGTT---TSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT--C----SSC---CSSEEEE
T ss_pred eEEEEEeCCCCCccccCc---cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH--H----Hhh---cCCEEEE
Confidence 6789999 777888854 222333336679999999999999988999 88886543 1 111 2566643
Q ss_pred eccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec-c-cchHHHHH
Q 046608 78 SQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS-E-YPLKQMIE 123 (256)
Q Consensus 78 ~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~-~-~~~~~~~~ 123 (256)
+. .|.+.++..+...+ .+ +++++.||+.+ . ..++++++
T Consensus 72 --~~--~gl~~sl~~a~~~~-~~---~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 72 --DE--KDLNEALNRYLKEA-EE---PVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp --CC--SCHHHHHHHHHHHC-CS---CEEEECSCCTTCCHHHHHHHTT
T ss_pred --CC--CCHHHHHHHHHHhc-CC---CEEEEcCCcCCCCHHHHHHHHc
Confidence 23 67888999888777 33 79999999943 3 34666655
No 59
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.25 E-value=7.1e-05 Score=64.78 Aligned_cols=225 Identities=16% Similarity=0.187 Sum_probs=131.7
Q ss_pred eEEEEeCCCCCccccCCCCCCCcccee-CCcchHHHHHHHHHHc----C-CCEEEEEccCC-hHHHHHHHHhhhhccCc-
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDF-ANKPMILHQIEALKAV----G-VTEVVLAINYQ-PEVMLNFLKEFEKKLEI- 73 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i-~g~pli~~~l~~l~~~----~-i~~i~vv~~~~-~~~i~~~~~~~~~~~~~- 73 (256)
-+|+||||.||||+. ..||.++++ .|+++++..++++... + .-..+|.++.. .+.+.++++++ +.++.
T Consensus 78 avvlLaGGlGTRLG~---~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~-~~Fgl~ 153 (484)
T 3gue_A 78 VVLKLNGGLGTGMGL---NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKY-PTLYEV 153 (484)
T ss_dssp EEEEEECCCCGGGTC---SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGC-HHHHTT
T ss_pred EEEEEcCCcccccCC---CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhC-cccCCC
Confidence 367889999999987 789999999 8999999998887653 2 22455666554 77888888764 22221
Q ss_pred --EEEeecc-----------------------CCcCCCcHHHHH-----HHhhhcCCCCCcEEEEeCCeecccchHHHHH
Q 046608 74 --KITCSQE-----------------------TEPLGTAGPLAL-----ARDKLIDDSGEPFFVLNSDVISEYPLKQMIE 123 (256)
Q Consensus 74 --~v~~~~~-----------------------~~~~g~~~s~~~-----~~~~i~~~~~~~~lv~~~D~~~~~~~~~~~~ 123 (256)
.+.+..| +.+.|.++-+.. .++.+...+-+++.+...|.+....=-.++.
T Consensus 154 ~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~lG 233 (484)
T 3gue_A 154 FDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRLLD 233 (484)
T ss_dssp CCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHHHH
T ss_pred ccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHHHH
Confidence 1111111 123444432221 1233433333489999999943311135567
Q ss_pred HHHhcCCceEEEEEecCCCc-CceeEEEc---------CCCCe--EeEEeecCCC-------CC-CCeEEEEEEEeCHhh
Q 046608 124 FHRGHGGEASIMVTKVDEPS-KYGVVVME---------ETMGK--VEKFVEKPKN-------FV-GNKINAGIYLLNPSV 183 (256)
Q Consensus 124 ~~~~~~~~~~i~~~~~~~~~-~~~~v~~~---------~~~~~--v~~~~ek~~~-------~~-~~~~~~Giy~~~~~~ 183 (256)
.+..+++++.+-+++...+. .-|.+... .+ |+ +.++.+-|.. .. -...+++-.+++-..
T Consensus 234 ~~~~~~~d~~~kvv~Kt~~dekgG~l~~~~~~~~~~~~~d-G~~~vvEyseip~e~~~~f~~~~g~~~FNtnNi~~~l~~ 312 (484)
T 3gue_A 234 YMHEKQLGFLMEVCRRTESDKKGGHLAYKDVIDETTGQTR-RRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNIWINLME 312 (484)
T ss_dssp HHHHTTCSEEEEEEECCTTCCSSEEEEEEC--------CC-CEEEEEEGGGSCGGGHHHHTCTTTSCEEEEEEEEEEHHH
T ss_pred HHHhcCCCEEEEEEECCCCCCceeEEEEEccccccccCCC-CCEEEEEeccCCHHHHhhhcCCCCceEeEeeeEEEEHHH
Confidence 77778899988887775553 34533332 13 43 4555554331 11 226688888888766
Q ss_pred HHhc-ccC--C----------------------CCcc---hhhHHHHHhcCcEEEEEeC-ceEEecCCHHHHHHHHHHHH
Q 046608 184 LDRI-ELK--P----------------------TSIE---KEVFPEIAVENKLFAMVLP-GFWMDIGQPKDYITGLRLYL 234 (256)
Q Consensus 184 ~~~l-~~~--~----------------------~~~~---~~~~~~l~~~~~v~~~~~~-~~~~di~t~~d~~~a~~~~~ 234 (256)
++.+ ... . ..+| .++++.+ ....++.+. ..|..+-+..|++..+..+.
T Consensus 313 l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~---~~~~~ieV~R~rF~PvKn~sdLl~~~Sdly 389 (484)
T 3gue_A 313 LKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF---DRSEAVVVPRERFAPVKTCSDLLALRSDAY 389 (484)
T ss_dssp HHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS---SSEEEEECCGGGCCCCSSHHHHHHHHSTTE
T ss_pred HHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC---CccEEEEEChhhccccccchHHHHHhhhce
Confidence 6332 111 0 0011 1333332 244455443 47889999999988765543
No 60
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=98.05 E-value=3.6e-05 Score=68.38 Aligned_cols=145 Identities=13% Similarity=0.163 Sum_probs=90.3
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeC---CcchHHHHHHHHHHc-C-CCEEEEEcc-CChHHHHHHHHhhhhccCcEE
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFA---NKPMILHQIEALKAV-G-VTEVVLAIN-YQPEVMLNFLKEFEKKLEIKI 75 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~---g~pli~~~l~~l~~~-~-i~~i~vv~~-~~~~~i~~~~~~~~~~~~~~v 75 (256)
-+|+||||.|+||+- ..||.++|++ |+++++..++++.+. | .-..+|.++ ...+.+.+++++++-. ...+
T Consensus 116 avvllaGGlGTRLG~---~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fgl~-~~~V 191 (630)
T 3ogz_A 116 VFVLVAGGLGERLGY---SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQLE-VPNL 191 (630)
T ss_dssp EEEEECCCEEGGGTE---EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTTCC-CTTE
T ss_pred eEEEecCCcccccCC---CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhCCC-cccE
Confidence 367889999999987 6799999996 999999999988754 3 223455554 5578888999875321 1122
Q ss_pred Eeecc----------------------CCcCCCcHHH--HH---------------------HHhhhcCCCCCcEEEEeC
Q 046608 76 TCSQE----------------------TEPLGTAGPL--AL---------------------ARDKLIDDSGEPFFVLNS 110 (256)
Q Consensus 76 ~~~~~----------------------~~~~g~~~s~--~~---------------------~~~~i~~~~~~~~lv~~~ 110 (256)
.+..| +.+.|.++-+ +. .++.+...+-+++.+...
T Consensus 192 ~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~v 271 (630)
T 3ogz_A 192 HVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQD 271 (630)
T ss_dssp EEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEECT
T ss_pred EEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEcc
Confidence 22211 1234444322 11 244443333348899999
Q ss_pred Ceecccch-HHHHHHHHhcCCceEEEEEecCCCcCceeEEE
Q 046608 111 DVISEYPL-KQMIEFHRGHGGEASIMVTKVDEPSKYGVVVM 150 (256)
Q Consensus 111 D~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~ 150 (256)
|++.-... -.++..+..++.++.+-+++......-|.+..
T Consensus 272 DN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p~E~vG~l~~ 312 (630)
T 3ogz_A 272 TNAGATITIPISLALSAEHSLDMNFTCIPRVPKEPIGLLCR 312 (630)
T ss_dssp TBTTHHHHHHHHHHHHHHTTCSEEEEEECCCSSCSSCEEEE
T ss_pred CCccccccCHHHhHHHHhcCCCEEEEEEECCCCcceeeEEE
Confidence 99542222 23567777788888887776533344555443
No 61
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=97.92 E-value=0.0002 Score=56.99 Aligned_cols=89 Identities=10% Similarity=0.131 Sum_probs=59.4
Q ss_pred cchHHHHHHHHHHcCCCEEEEEccCChHHH---HHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEE
Q 046608 31 KPMILHQIEALKAVGVTEVVLAINYQPEVM---LNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFV 107 (256)
Q Consensus 31 ~pli~~~l~~l~~~~i~~i~vv~~~~~~~i---~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv 107 (256)
++|+.++++.+...+.+.++++++.....+ .... . . ++ .++.|. ..|.+.++..++..+-..+.+.+++
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-~--~--~~--~~~~q~-~~gLg~rl~~a~~~~~~~~~~~vli 108 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-G--P--QH--MFAAQQ-GLDLGERMKHAMQKAFDDGYDRVVL 108 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-C--T--TS--EEEECC-SSSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-c--C--Cc--EEecCC-CCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 489999999999988777777776554443 2222 1 1 23 334554 5588899999988762111227999
Q ss_pred EeCCe--ecccchHHHHHHHHh
Q 046608 108 LNSDV--ISEYPLKQMIEFHRG 127 (256)
Q Consensus 108 ~~~D~--~~~~~~~~~~~~~~~ 127 (256)
+.+|+ +....+.++++.+..
T Consensus 109 igaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 109 MGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp ECSSCTTCCHHHHHHHHHHTTT
T ss_pred EcCCCCCCCHHHHHHHHHHhcc
Confidence 99999 445568888775443
No 62
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=96.32 E-value=0.074 Score=41.72 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=66.8
Q ss_pred CCcchHHHHHHHHHHcCC--CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccC------CcCCCcHHHHHHHhhhcCC
Q 046608 29 ANKPMILHQIEALKAVGV--TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQET------EPLGTAGPLALARDKLIDD 100 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~~i--~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~------~~~g~~~s~~~~~~~i~~~ 100 (256)
+....|...|+.+.+... -+|+||-....+...+.++++....+++++..... ...|.+.+.-.+++..+.+
T Consensus 11 n~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g~ 90 (255)
T 1qg8_A 11 NKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEGE 90 (255)
T ss_dssp SCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCCS
T ss_pred CCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccCHHHHHHHHHHHcCCC
Confidence 445688899999887643 36777776666677777777644334555432200 3557777788888887665
Q ss_pred CCCcEEEEeCCeecccc-hHHHHHHHHhc
Q 046608 101 SGEPFFVLNSDVISEYP-LKQMIEFHRGH 128 (256)
Q Consensus 101 ~~~~~lv~~~D~~~~~~-~~~~~~~~~~~ 128 (256)
.++++.+|.+..++ +.++++.+.++
T Consensus 91 ---~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 91 ---YITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp ---EEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred ---EEEEeCCCCccChHHHHHHHHHHHhC
Confidence 89999999977766 78888877765
No 63
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=95.91 E-value=0.058 Score=41.90 Aligned_cols=101 Identities=14% Similarity=0.137 Sum_probs=67.5
Q ss_pred CCcchHHHHHHHHHHcCC--CEEEEEccCChHHHHHHHHhhhhcc-CcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcE
Q 046608 29 ANKPMILHQIEALKAVGV--TEVVLAINYQPEVMLNFLKEFEKKL-EIKITCSQETEPLGTAGPLALARDKLIDDSGEPF 105 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~~i--~~i~vv~~~~~~~i~~~~~~~~~~~-~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~ 105 (256)
+....|...|+.+.+... -+|+||-....+...+.++++..+. +++++ . .+..|.+.+.-.+++....+ ++
T Consensus 15 n~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i--~-~~n~G~~~a~N~g~~~a~g~---~i 88 (240)
T 3bcv_A 15 NVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVI--H-KKNAGLGMACNSGLDVATGE---YV 88 (240)
T ss_dssp SCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEE--E-CCCCCHHHHHHHHHHHCCSS---EE
T ss_pred CCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEE--E-CCCCChHHHHHHHHHHcCCC---EE
Confidence 455689999999987643 3677766544444444455443222 34443 2 34567788888888888766 89
Q ss_pred EEEeCCeecccc-hHHHHHHHHhcCCceEEE
Q 046608 106 FVLNSDVISEYP-LKQMIEFHRGHGGEASIM 135 (256)
Q Consensus 106 lv~~~D~~~~~~-~~~~~~~~~~~~~~~~i~ 135 (256)
+++.+|.+..++ +.++++.+.+++.++++.
T Consensus 89 ~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 89 AFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp EECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred EEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 999999977766 788888877766665543
No 64
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=95.81 E-value=0.13 Score=44.57 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=67.2
Q ss_pred CCc-chHHHHHHHHHHcCC----CEEEEEccCChH-HHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCC
Q 046608 29 ANK-PMILHQIEALKAVGV----TEVVLAINYQPE-VMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSG 102 (256)
Q Consensus 29 ~g~-pli~~~l~~l~~~~i----~~i~vv~~~~~~-~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~ 102 (256)
+.. ..|...|+.+.+... .+|+||-....+ ...+.++++..+....+.++...+..|.+.+.-.++.....+
T Consensus 39 N~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~gd-- 116 (472)
T 1xhb_A 39 NEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQ-- 116 (472)
T ss_dssp SCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCSS--
T ss_pred CCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhccCC--
Confidence 344 689999999888642 278777654433 344455544333332344444455568888888888888766
Q ss_pred CcEEEEeCCeecccc-hHHHHHHHHhcCCce
Q 046608 103 EPFFVLNSDVISEYP-LKQMIEFHRGHGGEA 132 (256)
Q Consensus 103 ~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~~ 132 (256)
.++++++|....++ +..+++.+.+....+
T Consensus 117 -~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 117 -VITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp -EEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred -eEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 89999999977665 888888877665433
No 65
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=95.08 E-value=3.3e-05 Score=65.61 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=47.2
Q ss_pred EEEEeCCeeccc--chHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCC-CeEeEEeecCCCCCC-CeEEEEEEEeC
Q 046608 105 FFVLNSDVISEY--PLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETM-GKVEKFVEKPKNFVG-NKINAGIYLLN 180 (256)
Q Consensus 105 ~lv~~~D~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~-~~v~~~~ek~~~~~~-~~~~~Giy~~~ 180 (256)
-++--+|++|.- ++.++++.+. +++.. .+++..+++..++.+. +.+ .|.|||..... .+.++|+|+|+
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g--~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~~~~~~aGiyI~~ 84 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK-----VEFQG--NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKHLKSSEAGAIIIS 84 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT-----CEEES--CTTCEECEECCTTTCCTTEE-EECCSSSTHHHHHTCCCSEEEEE
T ss_pred CcccCccccccCcCcHHHHHHhhC-----CEEEC--CCcceEEEEeccccCCCCeE-EEEeCchhhhhhhcCCcEEEEeC
Confidence 467789999986 7999998765 34432 4566778888877531 566 99999974222 35689999999
Q ss_pred HhhHHh
Q 046608 181 PSVLDR 186 (256)
Q Consensus 181 ~~~~~~ 186 (256)
++++..
T Consensus 85 ~~~l~~ 90 (374)
T 2iu8_A 85 RTQFQK 90 (374)
T ss_dssp HHHHHT
T ss_pred hhHhhh
Confidence 988763
No 66
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=94.58 E-value=0.25 Score=44.03 Aligned_cols=100 Identities=14% Similarity=0.206 Sum_probs=64.8
Q ss_pred ceeCCc--chHHHHHHHHHHcCC-C---EEEEEccCChHHH-HHHHHhhhhcc-CcEEEeeccCCcCCCcHHHHHHHhhh
Q 046608 26 VDFANK--PMILHQIEALKAVGV-T---EVVLAINYQPEVM-LNFLKEFEKKL-EIKITCSQETEPLGTAGPLALARDKL 97 (256)
Q Consensus 26 l~i~g~--pli~~~l~~l~~~~i-~---~i~vv~~~~~~~i-~~~~~~~~~~~-~~~v~~~~~~~~~g~~~s~~~~~~~i 97 (256)
+|.-|. ..|...|+.+.+... . +|+||-....+.. .+.++++.... +++++ ...+..|.+.+.-.++...
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi--~~~~n~G~~~A~N~G~~~A 195 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRIL--RTKKREGLIRTRMLGASVA 195 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEE--ECSSCCCHHHHHHHHHHHC
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEE--ECCCCCCHHHHHHHHHHhc
Confidence 333454 588888888876542 2 7777765443322 44444433222 34443 4445568888888888888
Q ss_pred cCCCCCcEEEEeCCeecccc-hHHHHHHHHhcCC
Q 046608 98 IDDSGEPFFVLNSDVISEYP-LKQMIEFHRGHGG 130 (256)
Q Consensus 98 ~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~ 130 (256)
..+ .++++++|.....+ +..+++.+.+...
T Consensus 196 ~gd---~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 196 TGD---VITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp CSS---EEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred CCC---EEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 765 89999999977655 8888888776543
No 67
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=93.77 E-value=0.47 Score=42.65 Aligned_cols=104 Identities=15% Similarity=0.114 Sum_probs=69.1
Q ss_pred cee-CCcchHHHHHHHHHHcC---CCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCC
Q 046608 26 VDF-ANKPMILHQIEALKAVG---VTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDS 101 (256)
Q Consensus 26 l~i-~g~pli~~~l~~l~~~~---i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~ 101 (256)
+|. +....|..+|+.+.... .-+|+||-....+...+.++++....++.++... ....|.+.+.-.++.....+
T Consensus 99 Ip~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~-~~~~g~~~a~N~g~~~a~g~- 176 (625)
T 2z86_A 99 IPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQK-DYGYQLCAVRNLGLRAAKYN- 176 (625)
T ss_dssp EEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEEC-CCSCCHHHHHHHHHHHCCSS-
T ss_pred EecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeC-CCCcchhHHHHHHHHhCCcC-
Confidence 444 34468899999998763 3477777765555566667766444455554332 22334667777888877665
Q ss_pred CCcEEEEeCCeecccc-hHHHHHHHHhcCCceE
Q 046608 102 GEPFFVLNSDVISEYP-LKQMIEFHRGHGGEAS 133 (256)
Q Consensus 102 ~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~~~ 133 (256)
.++++.+|.....+ +..+++.+......++
T Consensus 177 --~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~ 207 (625)
T 2z86_A 177 --YVAILDCDMAPNPLWVQSYMELLAVDDNVAL 207 (625)
T ss_dssp --EEEEECTTEEECTTHHHHHHHHHHHCTTEEE
T ss_pred --EEEEECCCCCCCHHHHHHHHHHHhcCCceEE
Confidence 89999999977766 7888887776654433
No 68
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=92.83 E-value=0.24 Score=40.73 Aligned_cols=100 Identities=11% Similarity=-0.005 Sum_probs=66.2
Q ss_pred CCcchHHHHHHHHHHcC---CCEEEEEccCChHHHHHHHHhhhhccCcEEEe----ec-cCCcCCCcHHHHHHHhhhcCC
Q 046608 29 ANKPMILHQIEALKAVG---VTEVVLAINYQPEVMLNFLKEFEKKLEIKITC----SQ-ETEPLGTAGPLALARDKLIDD 100 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~~---i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~----~~-~~~~~g~~~s~~~~~~~i~~~ 100 (256)
+....|..+|+.+.+.. ..+|+||-+...+...+.++++. .++.. .. .....|.+.++-.++...+.+
T Consensus 58 N~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~----~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~gd 133 (329)
T 3ckj_A 58 DEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAG----ARVVSREQALPEVPIRPGKGEALWRSLAASRGD 133 (329)
T ss_dssp SCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTT----CEEEEHHHHCTTSCCCCSHHHHHHHHHHHCCCS
T ss_pred CCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhh----hhhccceeeeccCCCCCCHHHHHHHHHHhCCCC
Confidence 45578899999887752 25788877555555566666553 22211 11 344567778888888887765
Q ss_pred CCCcEEEEeCCee-cccc-hHHHHHHHHhc-CCceEEE
Q 046608 101 SGEPFFVLNSDVI-SEYP-LKQMIEFHRGH-GGEASIM 135 (256)
Q Consensus 101 ~~~~~lv~~~D~~-~~~~-~~~~~~~~~~~-~~~~~i~ 135 (256)
.++++++|.. +..+ +.++++.+.++ +.+++..
T Consensus 134 ---~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g 168 (329)
T 3ckj_A 134 ---IVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKS 168 (329)
T ss_dssp ---EEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEE
T ss_pred ---EEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEE
Confidence 8999999998 6665 78888875543 4454444
No 69
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=92.52 E-value=0.67 Score=39.19 Aligned_cols=191 Identities=10% Similarity=0.023 Sum_probs=101.4
Q ss_pred CCcchHHHHHHHHHH----cC-CCEEEEEccCChHHHHHHHHhhhhccCcEEEe-----eccCCcCCCcHHHHHHHhhhc
Q 046608 29 ANKPMILHQIEALKA----VG-VTEVVLAINYQPEVMLNFLKEFEKKLEIKITC-----SQETEPLGTAGPLALARDKLI 98 (256)
Q Consensus 29 ~g~pli~~~l~~l~~----~~-i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~-----~~~~~~~g~~~s~~~~~~~i~ 98 (256)
+....|..+|+.+.+ .+ ..+|+||-+...+...+.++++. .++.. .......|.+.++..++....
T Consensus 104 Ne~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~----~~v~~~~~~~i~~~~n~G~g~A~n~G~~~A~ 179 (387)
T 3f1y_A 104 NVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHG----AEVYSENELMSGYGDAHGKGDAMWRALSVTR 179 (387)
T ss_dssp SCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTT----CEEEEGGGTTGGGCSCCSHHHHHHHHTTTCC
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhC----chhcccceeEecCCccCCHHHHHHHHHHhcC
Confidence 445677777777754 22 45888887665555666666653 33321 122345678888888888876
Q ss_pred CCCCCcEEEEeCCee-cccc-hHHHHHHHHhc-CCceEEEEEecCCCcCceeEEEcCCCCeEeEEeec-------CCCCC
Q 046608 99 DDSGEPFFVLNSDVI-SEYP-LKQMIEFHRGH-GGEASIMVTKVDEPSKYGVVVMEETMGKVEKFVEK-------PKNFV 168 (256)
Q Consensus 99 ~~~~~~~lv~~~D~~-~~~~-~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~~~ek-------~~~~~ 168 (256)
.+ .++++++|.. .+++ +.++++...+. +.+.++........... ....... +++.+.... +....
T Consensus 180 gd---~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~-~~~~~~~-g~v~~~~~~~l~~~~~~~l~~ 254 (387)
T 3f1y_A 180 GD---LVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGE-SIEEDGG-GRVTELTAKPLFNLFYPELAG 254 (387)
T ss_dssp SS---EEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------CCBCC-SHHHHHTHHHHHHHHCGGGTT
T ss_pred CC---EEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeecccccccc-ccccccC-CchhhhhHHHHHHHHhHhhcc
Confidence 65 8999999998 6655 78888877655 56666554432211000 0000111 333221100 00000
Q ss_pred CCeEEEEEEEeCHhhHHhcc-cCCCCcchhhHHHHH-hcC-c-EEEEEeCceEEecCCHHHHHH
Q 046608 169 GNKINAGIYLLNPSVLDRIE-LKPTSIEKEVFPEIA-VEN-K-LFAMVLPGFWMDIGQPKDYIT 228 (256)
Q Consensus 169 ~~~~~~Giy~~~~~~~~~l~-~~~~~~~~~~~~~l~-~~~-~-v~~~~~~~~~~di~t~~d~~~ 228 (256)
-....+|.++|+.++++.+. ...+.++.+++-.+. ..| . +.-+++.-+..+-.+...+-.
T Consensus 255 ~~d~~sG~~a~rR~~l~~i~f~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~~~~~glsk 318 (387)
T 3f1y_A 255 FVQPLAGEFVADRELFCSIPFLTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRHQHLRDLSR 318 (387)
T ss_dssp CSCTTCSCEEEEHHHHTTSCEECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCCCCHHHHHH
T ss_pred ccccccccEEEEHHHHHhCCCCCCcchHHHHHHHHHHhcCCCeEEEEecceeecCCCCHHHHHH
Confidence 01123678999999999873 223444445544443 334 3 655655322223333444433
No 70
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=91.78 E-value=1.4 Score=38.42 Aligned_cols=98 Identities=13% Similarity=0.167 Sum_probs=63.5
Q ss_pred ceeCCc-c-hHHHHHHHHHHcCC-C---EEEEEccCCh-HHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhc
Q 046608 26 VDFANK-P-MILHQIEALKAVGV-T---EVVLAINYQP-EVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLI 98 (256)
Q Consensus 26 l~i~g~-p-li~~~l~~l~~~~i-~---~i~vv~~~~~-~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~ 98 (256)
+|.-|. . .|...|+.+.+... . +|+||-.... +.+...+... .+++++ ...+..|.+.+.-.++....
T Consensus 72 Ip~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~---~~v~vi--~~~~n~G~~~A~N~G~~~A~ 146 (501)
T 2ffu_A 72 ITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI---EKVRVL--RNDRREGLMRSRVRGADAAQ 146 (501)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGB---TTEEEE--ECSSCCHHHHHHHHHHHHCC
T ss_pred EEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcC---CCEEEE--ECCCCcCHHHHHHHHHHhcC
Confidence 444454 3 78888988876542 2 7777764332 2333333221 145444 33445677888888888887
Q ss_pred CCCCCcEEEEeCCeecccc-hHHHHHHHHhcCCc
Q 046608 99 DDSGEPFFVLNSDVISEYP-LKQMIEFHRGHGGE 131 (256)
Q Consensus 99 ~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~ 131 (256)
.+ .++++++|....++ +..+++.+.+....
T Consensus 147 gd---~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 147 AK---VLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp SS---EEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CC---EEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 66 89999999976655 88998888776654
No 71
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=90.08 E-value=2.1 Score=39.89 Aligned_cols=100 Identities=19% Similarity=0.254 Sum_probs=63.4
Q ss_pred cceeCCcc--hHHHHHHHHHHcCC-C---EEEEEccCChHHH---------------HHHHHhhhhccCcEEEeeccCCc
Q 046608 25 LVDFANKP--MILHQIEALKAVGV-T---EVVLAINYQPEVM---------------LNFLKEFEKKLEIKITCSQETEP 83 (256)
Q Consensus 25 ll~i~g~p--li~~~l~~l~~~~i-~---~i~vv~~~~~~~i---------------~~~~~~~~~~~~~~v~~~~~~~~ 83 (256)
++|.-|.+ ++...|+.+.+... . +|+|+.....+.. .+.++.+.++.++.+.... .+.
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~-~~~ 223 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRE-RNE 223 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEECS-SCC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEec-CCC
Confidence 34444543 66999999977642 2 6777775443222 2233333344466655332 233
Q ss_pred CCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccc-hHHHHHHHHhc
Q 046608 84 LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRGH 128 (256)
Q Consensus 84 ~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~~ 128 (256)
.|.+.++-.+++..+.+ .++++++|...+++ +.++++.+.+.
T Consensus 224 ~GKa~alN~gl~~a~gd---~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 224 HAKAGNMSAALERLKGE---LVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp SHHHHHHHHHHHHCCCS---EEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred CcchHHHHHHHHhcCCC---EEEEECCCCCcChHHHHHHHHHHhcC
Confidence 56677888888888766 89999999977766 78888877544
No 72
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=89.33 E-value=2.6 Score=37.77 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=63.6
Q ss_pred CCcchHHHHHHHHHHcCC--CEEEEEccCChHHHHHHHHhhhhcc-CcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcE
Q 046608 29 ANKPMILHQIEALKAVGV--TEVVLAINYQPEVMLNFLKEFEKKL-EIKITCSQETEPLGTAGPLALARDKLIDDSGEPF 105 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~~i--~~i~vv~~~~~~~i~~~~~~~~~~~-~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~ 105 (256)
+....|...|+.+..... -+|+||-+...+...+.++++.... +++++ . .+..|.+.+.-.++.....+ .+
T Consensus 385 n~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~--~-~~n~G~~~a~n~g~~~a~g~---~i 458 (625)
T 2z86_A 385 NCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFI--S-QKNKGIGSASNTAVRLCRGF---YI 458 (625)
T ss_dssp SCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEE--E-ECCCCHHHHHHHHHHHCCSS---EE
T ss_pred CCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEE--e-CCCCCHHHHHHHHHHhcCCC---EE
Confidence 456799999999886542 3677776544444455555543222 34444 2 34557788888888887765 89
Q ss_pred EEEeCCeecccc-hHHHHHHHHhcC
Q 046608 106 FVLNSDVISEYP-LKQMIEFHRGHG 129 (256)
Q Consensus 106 lv~~~D~~~~~~-~~~~~~~~~~~~ 129 (256)
+++.+|.++.++ +.++++.+....
T Consensus 459 ~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 459 GQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp EECCTTCEECTTHHHHHHHHHHHCT
T ss_pred EEECCCcccChhHHHHHHHHHHhCC
Confidence 999999977666 788887765544
No 73
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=87.32 E-value=4.5 Score=34.24 Aligned_cols=156 Identities=10% Similarity=0.042 Sum_probs=81.1
Q ss_pred CEEEEEccCChHHHHHHHH----hhhhccCcEEEeeccC--C--cCCCcHHHHHHH----hhhcCCCCCcEEEEeCCee-
Q 046608 47 TEVVLAINYQPEVMLNFLK----EFEKKLEIKITCSQET--E--PLGTAGPLALAR----DKLIDDSGEPFFVLNSDVI- 113 (256)
Q Consensus 47 ~~i~vv~~~~~~~i~~~~~----~~~~~~~~~v~~~~~~--~--~~g~~~s~~~~~----~~i~~~~~~~~lv~~~D~~- 113 (256)
-+|+||-+...+...+.++ +.....+++++...+. . ..|.+.++..++ ...+.+ .+++++||..
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd---~vv~mDADlq~ 105 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWE---RIHFYDADITS 105 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCS---EEEECCTTCSS
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCC---EEEEEcCCCCC
Confidence 3677776555444444444 2210225555433322 2 468889999998 555444 8899999995
Q ss_pred ccc-chHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcC-C-----CCeEeEEeecCCCCCCCeEEEEEEEeCHhhHHh
Q 046608 114 SEY-PLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEE-T-----MGKVEKFVEKPKNFVGNKINAGIYLLNPSVLDR 186 (256)
Q Consensus 114 ~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~-~-----~~~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~ 186 (256)
+++ .+.++++...+ ++|.++...... ..-+.+...- . ........ +...+ .+|.+.++.++++.
T Consensus 106 ~~P~~i~~Ll~~l~~-g~D~V~g~~~r~--~~~~~~~~~~~~~ll~~~~~~~~~~-~i~dp-----~sG~~a~~R~vl~~ 176 (397)
T 2bo4_A 106 FGPDWITKAEEAADF-GYGLVRHYFPRA--STDAMITWMITRTGFALLWPHTELS-WIEQP-----LGGELLMRREVAAM 176 (397)
T ss_dssp CCHHHHHHHHHHHHT-TCSEEEEECCCC--TTSCHHHHHTHHHHHHHHCTTSSGG-GCSCT-----TCCCEEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHc-CCCEEEEEeccc--cCCcHHHHHHHHHHHHHHHHHhhcc-ccccC-----CcccEEEeHHHHHH
Confidence 454 47888886644 577766542211 0000000000 0 00000000 11111 26788999999887
Q ss_pred cc-------cCCCCcchhhHHHHHhcC-cEEEEEeC
Q 046608 187 IE-------LKPTSIEKEVFPEIAVEN-KLFAMVLP 214 (256)
Q Consensus 187 l~-------~~~~~~~~~~~~~l~~~~-~v~~~~~~ 214 (256)
+. ...+.++.++.-.+...| ++.-+++.
T Consensus 177 l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 177 LYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp HHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred HhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 72 223444445555555555 67666664
No 74
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=86.94 E-value=1.6 Score=39.61 Aligned_cols=101 Identities=11% Similarity=0.160 Sum_probs=61.8
Q ss_pred CCcchHHHHHHHHHHc-----CCCEEEEEccCCh-----HHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhc
Q 046608 29 ANKPMILHQIEALKAV-----GVTEVVLAINYQP-----EVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLI 98 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~-----~i~~i~vv~~~~~-----~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~ 98 (256)
++...|...|+.+.+. .+.+|+||-+... +.+.+.+..... +++++ .+. ..|.+.+.-.++....
T Consensus 190 N~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--~I~vI--~~~-N~G~a~a~N~Gl~~A~ 264 (657)
T 4fix_A 190 NRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGS--RLSIH--DQP-NLGGSGGYSRVMYEAL 264 (657)
T ss_dssp SCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG--GEEEE--ECC-CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCC--CEEEE--ECC-CCCHHHHHHHHHHHHH
Confidence 5567888999888664 2346777765432 234444443322 34443 333 5566666667766653
Q ss_pred CC-CCCcEEEEeCCeecccc-hHHHHHHHHhcCCceEE
Q 046608 99 DD-SGEPFFVLNSDVISEYP-LKQMIEFHRGHGGEASI 134 (256)
Q Consensus 99 ~~-~~~~~lv~~~D~~~~~~-~~~~~~~~~~~~~~~~i 134 (256)
.. +.+.+++++.|.+..++ +.++++.+.......++
T Consensus 265 g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~v 302 (657)
T 4fix_A 265 KNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLV 302 (657)
T ss_dssp HHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEE
T ss_pred hcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEE
Confidence 21 12289999999977666 88888887766544333
No 75
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=85.68 E-value=0.15 Score=46.83 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=0.0
Q ss_pred CCcchHHHHHHHHHHcCC--CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEE
Q 046608 29 ANKPMILHQIEALKAVGV--TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFF 106 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~~i--~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~l 106 (256)
++...|..+|+.+.+... -+|+||-....+...+.++++...++..+.+....+..|.+.+.-.|+.....+ .++
T Consensus 12 N~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~gd---yI~ 88 (729)
T 3l7i_A 12 NAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVETP---YFM 88 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccCC---EEE
Confidence 334566777777655532 356666654455555666655433222344444444567778888888877765 899
Q ss_pred EEeCCeecccc-hHHHHHHHH
Q 046608 107 VLNSDVISEYP-LKQMIEFHR 126 (256)
Q Consensus 107 v~~~D~~~~~~-~~~~~~~~~ 126 (256)
++.+|.+..++ +..+++.+.
T Consensus 89 flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 89 FLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp ---------------------
T ss_pred EECCCCCCChhHHHHHHHHhc
Confidence 99999977655 777777666
No 76
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=76.86 E-value=20 Score=29.53 Aligned_cols=96 Identities=7% Similarity=0.049 Sum_probs=55.5
Q ss_pred ceeCCcchHHHHHHHHHHcCC----CEEEEEccCChHHHHHHHHhhhhccCcEEEeec-------cCCcCCC------cH
Q 046608 26 VDFANKPMILHQIEALKAVGV----TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQ-------ETEPLGT------AG 88 (256)
Q Consensus 26 l~i~g~pli~~~l~~l~~~~i----~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~-------~~~~~g~------~~ 88 (256)
+..-|+|=+.++|+.+.++.. ..++|+-....+++.+.++++..+ +....-. +.+..|. +.
T Consensus 8 I~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~--I~~~~~~d~~~~~~~~~N~g~~~y~~ia~ 85 (343)
T 1fo8_A 8 VIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSA--VTHIRQPDLSNIAVQPDHRKFQGYYKIAR 85 (343)
T ss_dssp EEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGG--SEEEECSCCCCCCCCTTCGGGHHHHHHHH
T ss_pred EEECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCc--eEEEEcCCccccccchhhcCcccchhHhH
Confidence 344677768899998888742 256666666677888888876422 2221101 1111222 13
Q ss_pred HHHHHHhhh-cCCCCCcEEEEeCCeecccchHHHHH
Q 046608 89 PLALARDKL-IDDSGEPFFVLNSDVISEYPLKQMIE 123 (256)
Q Consensus 89 s~~~~~~~i-~~~~~~~~lv~~~D~~~~~~~~~~~~ 123 (256)
.+..++..+ .....+.++++-.|++..+++-+.++
T Consensus 86 h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~ 121 (343)
T 1fo8_A 86 HYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQ 121 (343)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHH
T ss_pred HHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHH
Confidence 444555443 21112289999999999888554443
No 77
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=76.40 E-value=24 Score=27.19 Aligned_cols=41 Identities=5% Similarity=-0.132 Sum_probs=30.1
Q ss_pred CCCcHHHHHHHhhhcCCCCCcEEEEeCCeecccc-hHHHHHHHHh
Q 046608 84 LGTAGPLALARDKLIDDSGEPFFVLNSDVISEYP-LKQMIEFHRG 127 (256)
Q Consensus 84 ~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~ 127 (256)
.|.+.+.=.+++....+ +++++++|..++++ +.++++.+.+
T Consensus 60 ~g~a~a~N~Gi~~A~g~---yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 60 FHGFSWHKQMLPRCKGR---YVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCTTTHHHHHGGGCCSS---EEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCC---EEEEECCCcccCccHHHHHHHHHHh
Confidence 35556666676666655 89999999977766 7888877665
No 78
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=73.83 E-value=27 Score=26.49 Aligned_cols=86 Identities=14% Similarity=0.157 Sum_probs=46.3
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHc--CCCEEEEEccCChHHHHHHHHhhhhccCcEEEee
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAV--GVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCS 78 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~--~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~ 78 (256)
|+..|++.|.|+-| +.+++.+.+- +.+-+.|++++......+...+ .++++...
T Consensus 1 ~riaVl~SG~Gs~L--------------------~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~----~gIp~~~~ 56 (209)
T 1meo_A 1 ARVAVLISGTGSNL--------------------QALIDSTREPNSSAQIDIVISNKAAVAGLDKAER----AGIPTRVI 56 (209)
T ss_dssp CEEEEEESSSCTTH--------------------HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH----TTCCEEEC
T ss_pred CeEEEEEECCchHH--------------------HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH----cCCCEEEE
Confidence 57788888888644 4455555443 2333445555554444444433 37877643
Q ss_pred ccCCcCCC----cHHHHHHHhhhcCCCCCcEEEEeCCe-ecc
Q 046608 79 QETEPLGT----AGPLALARDKLIDDSGEPFFVLNSDV-ISE 115 (256)
Q Consensus 79 ~~~~~~g~----~~s~~~~~~~i~~~~~~~~lv~~~D~-~~~ 115 (256)
... ...+ ...+...++..+.+ ++|+.|-. +++
T Consensus 57 ~~~-~~~~r~~~~~~~~~~l~~~~~D----liv~a~y~~il~ 93 (209)
T 1meo_A 57 NHK-LYKNRVEFDSAIDLVLEEFSID----IVCLAGFMRILS 93 (209)
T ss_dssp CGG-GSSSHHHHHHHHHHHHHHTTCC----EEEEESCCSCCC
T ss_pred Ccc-ccCchhhhhHHHHHHHHhcCCC----EEEEcchhhhCC
Confidence 222 1122 13445555555554 77777765 666
No 79
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=73.58 E-value=15 Score=28.06 Aligned_cols=86 Identities=21% Similarity=0.196 Sum_probs=46.9
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCC-CEEEEEccC-ChHHHHHHHHhhhhccCcEEEee
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGV-TEVVLAINY-QPEVMLNFLKEFEKKLEIKITCS 78 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i-~~i~vv~~~-~~~~i~~~~~~~~~~~~~~v~~~ 78 (256)
|+..|++.|.|+-|.. +++....-.+ -+|..|+.. ....+.+..++ .++++...
T Consensus 3 ~riavl~Sg~Gsnl~a--------------------li~~~~~~~l~~eI~~Visn~~~a~v~~~A~~----~gIp~~~~ 58 (211)
T 3p9x_A 3 KRVAIFASGSGTNAEA--------------------IIQSQKAGQLPCEVALLITDKPGAKVVERVKV----HEIPVCAL 58 (211)
T ss_dssp CEEEEECCTTCHHHHH--------------------HHHHHHTTCCSSEEEEEEESCSSSHHHHHHHT----TTCCEEEC
T ss_pred CEEEEEEeCCchHHHH--------------------HHHHHHcCCCCcEEEEEEECCCCcHHHHHHHH----cCCCEEEe
Confidence 4677888888876643 4555544333 356655543 33344444443 37877543
Q ss_pred ccCCcCCC----cHHHHHHHhhhcCCCCCcEEEEeCCe-ecc
Q 046608 79 QETEPLGT----AGPLALARDKLIDDSGEPFFVLNSDV-ISE 115 (256)
Q Consensus 79 ~~~~~~g~----~~s~~~~~~~i~~~~~~~~lv~~~D~-~~~ 115 (256)
... ...+ ...+...++..+.+ ++|+.|-. +++
T Consensus 59 ~~~-~~~~r~~~d~~~~~~l~~~~~D----liv~agy~~Il~ 95 (211)
T 3p9x_A 59 DPK-TYPSKEAYEIEVVQQLKEKQID----FVVLAGYMRLVG 95 (211)
T ss_dssp CGG-GSSSHHHHHHHHHHHHHHTTCC----EEEESSCCSCCC
T ss_pred Chh-hcCchhhhHHHHHHHHHhcCCC----EEEEeCchhhcC
Confidence 221 1122 13455566666654 88887776 666
No 80
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=72.11 E-value=22 Score=27.04 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=54.0
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCC-CEEE-EEccCChHHHHHHHHhhhhccCcEEEee
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGV-TEVV-LAINYQPEVMLNFLKEFEKKLEIKITCS 78 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i-~~i~-vv~~~~~~~i~~~~~~~~~~~~~~v~~~ 78 (256)
|+.+|++.|.|+-| +.+++.+.+-.+ -+|. |++++......++.++ .++++...
T Consensus 1 ~ri~vl~Sg~gsnl--------------------~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~----~gIp~~~~ 56 (212)
T 1jkx_A 1 MNIVVLISGNGSNL--------------------QAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ----AGIATHTL 56 (212)
T ss_dssp CEEEEEESSCCHHH--------------------HHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH----TTCEEEEC
T ss_pred CEEEEEEECCcHHH--------------------HHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH----cCCcEEEe
Confidence 57788888887644 445666655432 2444 5555444444444433 47887653
Q ss_pred ccCCcCCC----cHHHHHHHhhhcCCCCCcEEEEeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 79 QETEPLGT----AGPLALARDKLIDDSGEPFFVLNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 79 ~~~~~~g~----~~s~~~~~~~i~~~~~~~~lv~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
... ...+ ...+...++..+.+ ++|+.|-+ +.+ ..+++... ..++-.++.
T Consensus 57 ~~~-~~~~r~~~~~~~~~~l~~~~~D----liv~agy~~il~---~~~l~~~~----~~~iNiHpS 110 (212)
T 1jkx_A 57 IAS-AFDSREAYDRELIHEIDMYAPD----VVVLAGFMRILS---PAFVSHYA----GRLLNIHPS 110 (212)
T ss_dssp CGG-GCSSHHHHHHHHHHHHGGGCCS----EEEESSCCSCCC---HHHHHHTT----TSEEEEESS
T ss_pred Ccc-cccchhhccHHHHHHHHhcCCC----EEEEeChhhhCC---HHHHhhcc----CCEEEEccC
Confidence 221 1112 13444555555553 78887776 666 34444321 234555554
No 81
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=64.71 E-value=24 Score=22.34 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=34.0
Q ss_pred CCccceeCCc------chHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhh
Q 046608 22 PKPLVDFANK------PMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEK 69 (256)
Q Consensus 22 pK~ll~i~g~------pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~ 69 (256)
|+.-+.+.|. ..++..|+.+...|+..+.|+.|...-.+.+.+.++-+
T Consensus 3 ~~~~lDLhG~~~~eA~~~l~~fl~~a~~~g~~~v~IIHGkG~GvLr~~V~~~L~ 56 (83)
T 2zqe_A 3 EVKEVDLRGLTVAEALLEVDQALEEARALGLSTLRLLHGKGTGALRQAIREALR 56 (83)
T ss_dssp -CCEEECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCSTTSHHHHHHHHHHH
T ss_pred CccEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHh
Confidence 4556666665 46778888888899999999999885555555554433
No 82
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=64.16 E-value=22 Score=27.08 Aligned_cols=74 Identities=15% Similarity=0.115 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHcCC--CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCC----cHHHHHHHhhhcCCCCCcEE
Q 046608 33 MILHQIEALKAVGV--TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT----AGPLALARDKLIDDSGEPFF 106 (256)
Q Consensus 33 li~~~l~~l~~~~i--~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~----~~s~~~~~~~i~~~~~~~~l 106 (256)
.+..+++.+.+.++ +-+.|++++......+..++ .++++...... ...+ ...+...+...+.+ ++
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~----~gIp~~~~~~~-~~~~r~~~~~~~~~~l~~~~~D----li 84 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKK----HNVECKVIQRK-EFPSKKEFEERMALELKKKGVE----LV 84 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHH----HTCCEEECCGG-GSSSHHHHHHHHHHHHHHTTCC----EE
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHH----cCCCEEEeCcc-cccchhhhhHHHHHHHHhcCCC----EE
Confidence 44556666666554 33445555544444444443 37877643221 1122 13344555555553 77
Q ss_pred EEeCCe-ecc
Q 046608 107 VLNSDV-ISE 115 (256)
Q Consensus 107 v~~~D~-~~~ 115 (256)
|+.|-. +.+
T Consensus 85 v~a~y~~il~ 94 (216)
T 2ywr_A 85 VLAGFMRILS 94 (216)
T ss_dssp EESSCCSCCC
T ss_pred EEeCchhhCC
Confidence 777775 555
No 83
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=62.60 E-value=18 Score=27.68 Aligned_cols=91 Identities=15% Similarity=0.084 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHc-CCCEEEEEc-cCChHHHHHHHHhhhhccCcEEEeeccCCcCCC---cHHHHHHHhhhcCCCCCcEEE
Q 046608 33 MILHQIEALKAV-GVTEVVLAI-NYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT---AGPLALARDKLIDDSGEPFFV 107 (256)
Q Consensus 33 li~~~l~~l~~~-~i~~i~vv~-~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~---~~s~~~~~~~i~~~~~~~~lv 107 (256)
.++.+++.+..- +. +|..|+ ++......+..+ +.++++........... ...+...++..+.+ ++|
T Consensus 18 nl~all~~~~~~~~~-eI~~Vis~~~~a~~~~~A~----~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~D----liv 88 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAI-EIRAVISNRADAYGLKRAQ----QADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPK----LIV 88 (215)
T ss_dssp HHHHHHHHHHTTCSE-EEEEEEESCTTCHHHHHHH----HTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCS----EEE
T ss_pred HHHHHHHHHHcCCCC-EEEEEEeCCcchHHHHHHH----HcCCCEEEeCccccCchhHhHHHHHHHHHhcCCC----EEE
Confidence 444555555542 22 455444 343332223333 33787764322111111 13445555555553 778
Q ss_pred EeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 108 LNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 108 ~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
+.|-+ +++ ..+++... ..++-.++.
T Consensus 89 ~agy~~il~---~~~l~~~~----~~~iNiHpS 114 (215)
T 3tqr_A 89 LAGFMRKLG---KAFVSHYS----GRMINIHPS 114 (215)
T ss_dssp ESSCCSCCC---HHHHHHTT----TSEEEEESS
T ss_pred EccchhhCC---HHHHhhcc----CCeEEeCcc
Confidence 77765 666 34444321 234555554
No 84
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=62.30 E-value=30 Score=26.68 Aligned_cols=95 Identities=8% Similarity=0.058 Sum_probs=49.4
Q ss_pred CCcchHHHHHHHHHHcCC-CEE-EEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCC----cHHHHHHHhhhcCCCC
Q 046608 29 ANKPMILHQIEALKAVGV-TEV-VLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT----AGPLALARDKLIDDSG 102 (256)
Q Consensus 29 ~g~pli~~~l~~l~~~~i-~~i-~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~----~~s~~~~~~~i~~~~~ 102 (256)
|.-..+..+++.+.+..+ -+| .|++.+......+..+ +.++++...... ...+ ...+...++..+.+
T Consensus 31 G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~----~~gIp~~~~~~~-~~~~r~~~~~~~~~~l~~~~~D-- 103 (229)
T 3auf_A 31 GSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERAR----RAGVDALHMDPA-AYPSRTAFDAALAERLQAYGVD-- 103 (229)
T ss_dssp SCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHH----HTTCEEEECCGG-GSSSHHHHHHHHHHHHHHTTCS--
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHH----HcCCCEEEECcc-cccchhhccHHHHHHHHhcCCC--
Confidence 444577888888877632 244 4555544444444443 347887643222 1122 13445555555554
Q ss_pred CcEEEEeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 103 EPFFVLNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 103 ~~~lv~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
++|+.|-. +++ ..+++... ..++-.++.
T Consensus 104 --liv~agy~~IL~---~~~l~~~~----~~~iNiHpS 132 (229)
T 3auf_A 104 --LVCLAGYMRLVR---GPMLTAFP----NRILNIHPS 132 (229)
T ss_dssp --EEEESSCCSCCC---HHHHHHST----TCEEEEESS
T ss_pred --EEEEcChhHhCC---HHHHhhcc----CCEEEEccC
Confidence 78887775 666 44444321 234555554
No 85
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=60.17 E-value=29 Score=26.37 Aligned_cols=91 Identities=7% Similarity=0.014 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHcCC-CEEE-EEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCC----cHHHHHHHhhhcCCCCCcEE
Q 046608 33 MILHQIEALKAVGV-TEVV-LAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT----AGPLALARDKLIDDSGEPFF 106 (256)
Q Consensus 33 li~~~l~~l~~~~i-~~i~-vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~----~~s~~~~~~~i~~~~~~~~l 106 (256)
.+..+++.+.+..+ -+|. |++.+....+.+..++ .++++...... ...+ ...+...+...+.+ ++
T Consensus 16 ~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~----~gIp~~~~~~~-~~~~~~~~~~~~~~~l~~~~~D----li 86 (212)
T 3av3_A 16 NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR----ENVPAFVFSPK-DYPSKAAFESEILRELKGRQID----WI 86 (212)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH----TTCCEEECCGG-GSSSHHHHHHHHHHHHHHTTCC----EE
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH----cCCCEEEeCcc-cccchhhhHHHHHHHHHhcCCC----EE
Confidence 45566777766532 2444 5555444444444443 37877643222 1122 12444555555554 78
Q ss_pred EEeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 107 VLNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 107 v~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
|+.|-+ +++ .++++... ..++-.++.
T Consensus 87 v~a~y~~il~---~~~l~~~~----~~~iNiHpS 113 (212)
T 3av3_A 87 ALAGYMRLIG---PTLLSAYE----GKIVNIHPS 113 (212)
T ss_dssp EESSCCSCCC---HHHHHHTT----TCEEEEESS
T ss_pred EEchhhhhCC---HHHHhhhc----CCEEEEecC
Confidence 887765 666 44444321 235555554
No 86
>3vdp_A Recombination protein RECR; zinc finger, DNA repair, DNA binding; 2.45A {Thermoanaerobacter tengcongensis} PDB: 3vdu_A 3ve5_D
Probab=56.14 E-value=42 Score=25.49 Aligned_cols=53 Identities=26% Similarity=0.361 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHcCCCEEEEEccCC--hHHHHHHHHhhhhccCcEEEeeccCCcCC
Q 046608 33 MILHQIEALKAVGVTEVVLAINYQ--PEVMLNFLKEFEKKLEIKITCSQETEPLG 85 (256)
Q Consensus 33 li~~~l~~l~~~~i~~i~vv~~~~--~~~i~~~~~~~~~~~~~~v~~~~~~~~~g 85 (256)
-|..+++++..-++++|++.+++. .+....++.+.-+.+++++.-..+.-+.|
T Consensus 137 ~i~~L~~Ri~~~~v~EVIlAtnpTvEGeaTa~Yi~~~Lk~~~vkvTRiA~GiPvG 191 (212)
T 3vdp_A 137 RIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVG 191 (212)
T ss_dssp THHHHHHHHHHSCCSEEEECCCSSHHHHHHHHHHHHHHTTTTCEEEECCBSBCTT
T ss_pred CHHHHHHHHhcCCCcEEEEECCCCccHHHHHHHHHHHhhhcCCCeeeccccCcCC
Confidence 477888888888899999999988 45556666665455578887655544444
No 87
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=53.24 E-value=21 Score=27.27 Aligned_cols=74 Identities=9% Similarity=-0.001 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHcCC-CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCC----cHHHHHHHhhhcCCCCCcEE
Q 046608 32 PMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT----AGPLALARDKLIDDSGEPFF 106 (256)
Q Consensus 32 pli~~~l~~l~~~~i-~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~----~~s~~~~~~~i~~~~~~~~l 106 (256)
+.++.+++.+.. .+ -+|+.|+........+..+ +.++++.... .....+ ...+...++..+.+ ++
T Consensus 24 snl~all~~~~~-~~~~eI~~Vis~~~a~~~~~A~----~~gIp~~~~~-~~~~~~r~~~d~~~~~~l~~~~~D----li 93 (215)
T 3da8_A 24 SLLRSLLDAAVG-DYPARVVAVGVDRECRAAEIAA----EASVPVFTVR-LADHPSRDAWDVAITAATAAHEPD----LV 93 (215)
T ss_dssp HHHHHHHHHSST-TCSEEEEEEEESSCCHHHHHHH----HTTCCEEECC-GGGSSSHHHHHHHHHHHHHTTCCS----EE
T ss_pred HHHHHHHHHHhc-cCCCeEEEEEeCCchHHHHHHH----HcCCCEEEeC-cccccchhhhhHHHHHHHHhhCCC----EE
Confidence 455666666543 22 2455444333233333333 3377776442 111111 12344444444443 77
Q ss_pred EEeCCe-ecc
Q 046608 107 VLNSDV-ISE 115 (256)
Q Consensus 107 v~~~D~-~~~ 115 (256)
++.|-+ +++
T Consensus 94 vlagy~~iL~ 103 (215)
T 3da8_A 94 VSAGFMRILG 103 (215)
T ss_dssp EEEECCSCCC
T ss_pred EEcCchhhCC
Confidence 776665 666
No 88
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=47.76 E-value=43 Score=23.50 Aligned_cols=57 Identities=9% Similarity=0.207 Sum_probs=39.2
Q ss_pred CCCccceeCCc------chHHHHHHHHHHcCCCEEEEEccCChH------HHHHHHHhhhhccCcEEEe
Q 046608 21 VPKPLVDFANK------PMILHQIEALKAVGVTEVVLAINYQPE------VMLNFLKEFEKKLEIKITC 77 (256)
Q Consensus 21 ~pK~ll~i~g~------pli~~~l~~l~~~~i~~i~vv~~~~~~------~i~~~~~~~~~~~~~~v~~ 77 (256)
.|..-+.+.|. ..+...|+.+...|+..+.|+.|.... .+.+.+..|-.+.....-|
T Consensus 45 ~~~~~LDLHG~~~~EA~~~L~~fL~~a~~~g~r~V~IIHGKG~gs~~~~~vLk~~V~~wL~~~~~V~~f 113 (137)
T 3qd7_X 45 PQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAY 113 (137)
T ss_dssp CGGGEEECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCSSTTSHHHHHHHHHHHHHHTSTTEEEE
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCchHHHHHHHHHHHhcCCceeEE
Confidence 45666777776 467788888888899999999987643 5666666665444433333
No 89
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=42.72 E-value=1.7 Score=37.95 Aligned_cols=107 Identities=15% Similarity=0.270 Sum_probs=57.1
Q ss_pred CcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEe----CCeecccchHHHHHHHHh--cC---------CceEEEE
Q 046608 72 EIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLN----SDVISEYPLKQMIEFHRG--HG---------GEASIMV 136 (256)
Q Consensus 72 ~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~----~D~~~~~~~~~~~~~~~~--~~---------~~~~i~~ 136 (256)
+..+.+.....+.+++.++..+-+.+. .++|+. +|.+.+.++..++..|.+ ++ ...++..
T Consensus 112 g~~vt~~~~~~pL~~a~~i~~~d~~~~-----~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~L 186 (496)
T 3c8v_A 112 GQHFVCDGKMIPLHDDEVITIKDSFLN-----KTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDL 186 (496)
T ss_dssp TCEEEETTEEEECSSCCEEEEESCEEE-----SCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEES
T ss_pred CCEEEEEecccchhHhhhHHhhhhcCC-----ceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceeeH
Confidence 566776666677787777544433331 136666 466544444444443332 11 1233333
Q ss_pred EecCCC--cCceeEEEcCCCCeEeEEeecCCCC--CCCeEEEEEEEeCHhhHHhc
Q 046608 137 TKVDEP--SKYGVVVMEETMGKVEKFVEKPKNF--VGNKINAGIYLLNPSVLDRI 187 (256)
Q Consensus 137 ~~~~~~--~~~~~v~~~~~~~~v~~~~ek~~~~--~~~~~~~Giy~~~~~~~~~l 187 (256)
....++ ..++.+. . ++++...++|... .++.....+|.|..+.++..
T Consensus 187 ~~l~d~li~~~~~~~---~-g~i~~~~~~pg~~~i~~~~~lnf~Y~f~~~~L~~~ 237 (496)
T 3c8v_A 187 STIHNSVVRYFSYVQ---T-GELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKY 237 (496)
T ss_dssp CEEESCEECTTCEEE---S-SEEESCEECTTEEEEECTTSEEEEEECCHHHHTTT
T ss_pred HHHHHHHHHHHhhhc---C-CceEEeeecCCceecccccccceEEEcCHHHHHHH
Confidence 334455 4566552 2 6777777776521 11223446999998887764
No 90
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=42.24 E-value=41 Score=25.61 Aligned_cols=74 Identities=9% Similarity=-0.026 Sum_probs=38.2
Q ss_pred chHHHHHHHHHHcCC-CEEEEEcc-CChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEe
Q 046608 32 PMILHQIEALKAVGV-TEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLN 109 (256)
Q Consensus 32 pli~~~l~~l~~~~i-~~i~vv~~-~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~ 109 (256)
+.++.+++.+..-++ -+|..|+. +......+..+ +.++++........ ....+...++..+.+ ++|+.
T Consensus 20 snl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~----~~gIp~~~~~~~~~--~~~~~~~~L~~~~~D----livla 89 (215)
T 3kcq_A 20 SNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQ----SYGIPTFVVKRKPL--DIEHISTVLREHDVD----LVCLA 89 (215)
T ss_dssp HHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHH----HTTCCEEECCBTTB--CHHHHHHHHHHTTCS----EEEES
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHH----HcCCCEEEeCcccC--ChHHHHHHHHHhCCC----EEEEe
Confidence 455666666654332 35555554 32222222333 33787764422211 125566666666664 88888
Q ss_pred CCe-ecc
Q 046608 110 SDV-ISE 115 (256)
Q Consensus 110 ~D~-~~~ 115 (256)
|-+ +.+
T Consensus 90 gy~~IL~ 96 (215)
T 3kcq_A 90 GFMSILP 96 (215)
T ss_dssp SCCSCCC
T ss_pred CCceEeC
Confidence 876 666
No 91
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=40.30 E-value=1.4 Score=34.25 Aligned_cols=46 Identities=17% Similarity=0.291 Sum_probs=27.5
Q ss_pred cEEEEEeCce----EEecCCHHHHHHHHHHHHhhhccc---------------CCcccccCceeccCC
Q 046608 207 KLFAMVLPGF----WMDIGQPKDYITGLRLYLDFLQKN---------------SSSKLATGSNIIGNV 255 (256)
Q Consensus 207 ~v~~~~~~~~----~~di~t~~d~~~a~~~~~~~~~~~---------------~~~~~~~~~~~~g~~ 255 (256)
+++.+...++ |.|++| |+.+++.++...... ....+.+++.|.|+|
T Consensus 40 ~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v 104 (240)
T 3r8y_A 40 QAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHV 104 (240)
T ss_dssp EEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSC
T ss_pred eEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCc
Confidence 4444444444 667766 777877766433222 226677888887775
No 92
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=40.17 E-value=1e+02 Score=22.15 Aligned_cols=97 Identities=14% Similarity=0.030 Sum_probs=56.8
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEe
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLN 109 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~ 109 (256)
+..-++..++.+.++ ++|+++.......+..++...-.+.+..+..... ....+......++.+ .++++-
T Consensus 25 ~~~~l~~~~~~i~~a--~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~-----~~~~~~~~~~~~~~~---d~~i~i 94 (187)
T 3sho_A 25 QPEAIEAAVEAICRA--DHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTE-----GGSTLTITLANLRPT---DLMIGV 94 (187)
T ss_dssp CHHHHHHHHHHHHHC--SEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECC-----CTHHHHHHHHTCCTT---EEEEEE
T ss_pred CHHHHHHHHHHHHhC--CEEEEEecCchHHHHHHHHHHHHhcCCCEEEecC-----CchhHHHHHhcCCCC---CEEEEE
Confidence 345677888888887 5777776544555555554433334665554321 223344444555554 466665
Q ss_pred CCeecccchHHHHHHHHhcCCceEEEE
Q 046608 110 SDVISEYPLKQMIEFHRGHGGEASIMV 136 (256)
Q Consensus 110 ~D~~~~~~~~~~~~~~~~~~~~~~i~~ 136 (256)
+-.-...++.++++..++.+...+.++
T Consensus 95 S~sG~t~~~~~~~~~ak~~g~~vi~IT 121 (187)
T 3sho_A 95 SVWRYLRDTVAALAGAAERGVPTMALT 121 (187)
T ss_dssp CCSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred eCCCCCHHHHHHHHHHHHCCCCEEEEe
Confidence 555444557777787788877655444
No 93
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=38.16 E-value=1.2e+02 Score=22.72 Aligned_cols=85 Identities=12% Similarity=0.081 Sum_probs=49.8
Q ss_pred hhcCCCCCcEEEEeCC---eecc-cchHHHHHHHHhcCCceEEEEEecCCCcCceeEEEcCCCCeEeEEeecCCCCCCCe
Q 046608 96 KLIDDSGEPFFVLNSD---VISE-YPLKQMIEFHRGHGGEASIMVTKVDEPSKYGVVVMEETMGKVEKFVEKPKNFVGNK 171 (256)
Q Consensus 96 ~i~~~~~~~~lv~~~D---~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~~v~~~~ek~~~~~~~~ 171 (256)
.++..+.+.++.+++| +-++ +++.+++ +.++|.++...+.+....+... .+ ..+..+ ....-..
T Consensus 48 Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV~GsYp~K~~~~~s~~---a~-~y~~~i----~~~~V~d 115 (203)
T 2c0n_A 48 FLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVVCGYYYLKTLRGYSVY---RK-DWEKEI----FDGEVNG 115 (203)
T ss_dssp HHHCTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEEEEECBCTTSSSBSEE---SS-SBCSSC----CCEECSE
T ss_pred HHhcCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEEEEEeeccCCCccchH---HH-HHHHhc----cCceeee
Confidence 3443333489999999 7555 3466666 4578888888776542211111 11 111111 1112236
Q ss_pred EEEEEEEeCHhhHHhcccCCC
Q 046608 172 INAGIYLLNPSVLDRIELKPT 192 (256)
Q Consensus 172 ~~~Giy~~~~~~~~~l~~~~~ 192 (256)
..+|+-.+++++++.|....+
T Consensus 116 ~~tGF~lIkR~V~e~L~~p~f 136 (203)
T 2c0n_A 116 CGLGFTFIKREFLEKIKRPAF 136 (203)
T ss_dssp ECSSEEEEEHHHHTTSCSSCC
T ss_pred ccccEEEEhHHHHHHHhhhhh
Confidence 678999999999999876544
No 94
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=37.33 E-value=86 Score=25.63 Aligned_cols=101 Identities=12% Similarity=0.105 Sum_probs=53.8
Q ss_pred HHHHHHHHHcCCCEEEEEccCC-hHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe-
Q 046608 35 LHQIEALKAVGVTEVVLAINYQ-PEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDV- 112 (256)
Q Consensus 35 ~~~l~~l~~~~i~~i~vv~~~~-~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~- 112 (256)
..-++.+.++|++.+.|.+... .+...+.++. .++.++.+.+.....+..+.+-+....+.+...+ .-.|..+|+
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~-ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~G--a~~i~l~DT~ 172 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTEADVSKQHIEY-ARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYG--ATCIYMADSG 172 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHH-HHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHT--CSEEEEECTT
T ss_pred HHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHH-HHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCC--CCEEEECCCc
Confidence 4567777888999888877543 1233333332 2233677766654333334444444334333222 234556666
Q ss_pred --ecccchHHHHHHHHhcCC-ceEEEEEe
Q 046608 113 --ISEYPLKQMIEFHRGHGG-EASIMVTK 138 (256)
Q Consensus 113 --~~~~~~~~~~~~~~~~~~-~~~i~~~~ 138 (256)
..+..+.++++..++.-. +..+..+.
T Consensus 173 G~~~P~~v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 173 GAMSMNDIRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp CCCCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred CccCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 335557888887765542 44454443
No 95
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=36.98 E-value=43 Score=27.01 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=39.3
Q ss_pred chHHHHHHHHHHcCC-CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCc---HHHHHHHhhhcCCCCCcEEE
Q 046608 32 PMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTA---GPLALARDKLIDDSGEPFFV 107 (256)
Q Consensus 32 pli~~~l~~l~~~~i-~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~---~s~~~~~~~i~~~~~~~~lv 107 (256)
+-++.+++....-.+ -+|..|++...+ +.+. ..+.++++...+.. ..+.. ..+...++..+.+ ++|
T Consensus 117 ~nl~~ll~~~~~g~l~~~I~~Visn~~~-~~~~----A~~~gIp~~~~~~~-~~~r~~~~~~~~~~l~~~~~D----liV 186 (302)
T 3o1l_A 117 HCLADLLHRWHSDELDCDIACVISNHQD-LRSM----VEWHDIPYYHVPVD-PKDKEPAFAEVSRLVGHHQAD----VVV 186 (302)
T ss_dssp HHHHHHHHHHHTTCSCSEEEEEEESSST-THHH----HHTTTCCEEECCCC-SSCCHHHHHHHHHHHHHTTCS----EEE
T ss_pred hhHHHHHHHHHCCCCCcEEEEEEECcHH-HHHH----HHHcCCCEEEcCCC-cCCHHHHHHHHHHHHHHhCCC----EEE
Confidence 455666666654322 356655543322 2222 23447877654322 11111 3455555555554 888
Q ss_pred EeCCe-ecccch
Q 046608 108 LNSDV-ISEYPL 118 (256)
Q Consensus 108 ~~~D~-~~~~~~ 118 (256)
+.|-+ +++..+
T Consensus 187 lagym~IL~~~~ 198 (302)
T 3o1l_A 187 LARYMQILPPQL 198 (302)
T ss_dssp ESSCCSCCCTTH
T ss_pred HhHhhhhcCHHH
Confidence 88887 666443
No 96
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=36.28 E-value=66 Score=24.33 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=37.4
Q ss_pred chHHHHHHHHHHcCC-CEEEEEcc-CChHHHHHHHHhhhhccCcEEEeeccCCcCCC----cHHHHHHHhhhcCCCCCcE
Q 046608 32 PMILHQIEALKAVGV-TEVVLAIN-YQPEVMLNFLKEFEKKLEIKITCSQETEPLGT----AGPLALARDKLIDDSGEPF 105 (256)
Q Consensus 32 pli~~~l~~l~~~~i-~~i~vv~~-~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~----~~s~~~~~~~i~~~~~~~~ 105 (256)
+.++.+++.+..-.+ -+|..|+. +......+..+ +.++++...... ...+ -..+...++..+.+ +
T Consensus 19 snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~----~~gIp~~~~~~~-~~~~r~~~d~~~~~~l~~~~~D----l 89 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAE----AAGIATQVFKRK-DFASKEAHEDAILAALDVLKPD----I 89 (209)
T ss_dssp HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHH----HTTCCEEECCGG-GSSSHHHHHHHHHHHHHHHCCS----E
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHH----HcCCCEEEeCcc-ccCCHHHHHHHHHHHHHhcCCC----E
Confidence 345556666655433 25555444 32222222333 337877643321 1111 13555666666664 7
Q ss_pred EEEeCCe-ecc
Q 046608 106 FVLNSDV-ISE 115 (256)
Q Consensus 106 lv~~~D~-~~~ 115 (256)
+|+.|-+ +++
T Consensus 90 iv~agy~~il~ 100 (209)
T 4ds3_A 90 ICLAGYMRLLS 100 (209)
T ss_dssp EEESSCCSCCC
T ss_pred EEEeccccCcC
Confidence 8877765 665
No 97
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=36.05 E-value=69 Score=24.20 Aligned_cols=57 Identities=23% Similarity=0.295 Sum_probs=31.3
Q ss_pred CeEEEEeCCCCCccccCCCCCCCccceeCCcc-h--HHHHHHHHHHcCCCEEEEEccCC--hHHHHHHHHh
Q 046608 1 MKALILVGGFGTRLRPLTLSVPKPLVDFANKP-M--ILHQIEALKAVGVTEVVLAINYQ--PEVMLNFLKE 66 (256)
Q Consensus 1 m~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~p-l--i~~~l~~l~~~~i~~i~vv~~~~--~~~i~~~~~~ 66 (256)
|+++|+|||.. .|+.+++...-+ + .+.=.+.+.+.|+.--+++...+ .++..+++++
T Consensus 1 Mki~i~~gg~~---------~p~~~~~~~~~~~~i~~DgGa~~l~~~g~~Pd~ivGD~DSi~~~~~~~~~~ 62 (212)
T 3l8m_A 1 MKANLLCGNRN---------LPKHILVEHKHEHWIGIDRGTLILLESGITPQFAVGDFDSISDSERNFIQQ 62 (212)
T ss_dssp CEEEEECCSSS---------CCTTHHHHTTTSEEEEETHHHHHHHHTTCCCSEEESCCCCSCHHHHHHHHH
T ss_pred CEEEEEeCCCC---------CchhhhhcccCCEEEEECHHHHHHHHCCCCccEEEeCcccCCHHHHHHHhc
Confidence 89999998741 234444432222 1 35566777778865555555443 3444444443
No 98
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=35.98 E-value=22 Score=28.46 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=47.8
Q ss_pred chHHHHHHHHHHcCC-CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcC--CCcHHHHHHHhhhcCCCCCcEEEE
Q 046608 32 PMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPL--GTAGPLALARDKLIDDSGEPFFVL 108 (256)
Q Consensus 32 pli~~~l~~l~~~~i-~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~--g~~~s~~~~~~~i~~~~~~~~lv~ 108 (256)
+-++.+++....-.+ -+|..|++...+. +.....+.++++...+..... .....+...++..+.+ ++|+
T Consensus 100 ~nl~~ll~~~~~g~l~~~i~~Visn~~~a----~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~D----livl 171 (287)
T 3nrb_A 100 HCLGDLLYRHRLGELDMEVVGIISNHPRE----ALSVSLVGDIPFHYLPVTPATKAAQESQIKNIVTQSQAD----LIVL 171 (287)
T ss_dssp HHHHHHHHHHHHTSSCCEEEEEEESSCGG----GCCCCCCTTSCEEECCCCGGGHHHHHHHHHHHHHHHTCS----EEEE
T ss_pred cCHHHHHHHHHCCCCCeEEEEEEeCChHH----HHHHHHHcCCCEEEEeccCcchhhHHHHHHHHHHHhCCC----EEEh
Confidence 566677777665433 3566555443322 333344558887654322110 0112445555666554 8888
Q ss_pred eCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 109 NSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 109 ~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
.|-+ +.+ ..+++.+. ..++-.++.
T Consensus 172 agym~il~---~~~l~~~~----~~~iNiHpS 196 (287)
T 3nrb_A 172 ARYMQILS---DDLSAFLS----GRCINIHHS 196 (287)
T ss_dssp SSCCSCCC---HHHHHHHT----TSEEEEESS
T ss_pred hhhhhhcC---HHHHhhcc----CCeEEECcc
Confidence 8887 666 34444332 134555544
No 99
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=32.82 E-value=1.3e+02 Score=22.39 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=45.0
Q ss_pred HHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc
Q 046608 37 QIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE 115 (256)
Q Consensus 37 ~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~ 115 (256)
.|+.|++.|+ ++.|+++.....+...++.. ++.-.+... .+-...+..+++.++-.. .-++.-||...+
T Consensus 84 ~L~~L~~~G~-~l~I~T~~~~~~~~~~l~~l----gi~~~f~~~---k~K~~~l~~~~~~lg~~~--~~~~~vGDs~nD 152 (211)
T 3ij5_A 84 GIRCLITSDI-DVAIITGRRAKLLEDRANTL----GITHLYQGQ---SDKLVAYHELLATLQCQP--EQVAYIGDDLID 152 (211)
T ss_dssp HHHHHHHTTC-EEEEECSSCCHHHHHHHHHH----TCCEEECSC---SSHHHHHHHHHHHHTCCG--GGEEEEECSGGG
T ss_pred HHHHHHHCCC-EEEEEeCCCHHHHHHHHHHc----CCchhhccc---CChHHHHHHHHHHcCcCc--ceEEEEcCCHHH
Confidence 7899999987 68888888777777777654 443332211 334567777777766432 235567888765
No 100
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=32.42 E-value=59 Score=22.12 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=27.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+.++.+.+...++.-..+.++
T Consensus 99 G~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k 135 (150)
T 2dxq_A 99 GRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYES 135 (150)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHH
Confidence 4579999999999889999998887665444444443
No 101
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=32.41 E-value=1.6e+02 Score=23.39 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=52.4
Q ss_pred cchHHHHHHHHHHcCCCEEEEEccCChH-----------H----HHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHh
Q 046608 31 KPMILHQIEALKAVGVTEVVLAINYQPE-----------V----MLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARD 95 (256)
Q Consensus 31 ~pli~~~l~~l~~~~i~~i~vv~~~~~~-----------~----i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~ 95 (256)
+.-++..++.+..++.+.|.+..+-... + +.+.++ +.++.+..+.+..+..+.-+..-+....+
T Consensus 79 ~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~-~a~~~g~~v~~~~~d~~~~~~~~~~~~~~ 157 (293)
T 3ewb_X 79 EGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHIS-YARQKFDVVQFSPEDATRSDRAFLIEAVQ 157 (293)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHH-HHHTTCSCEEEEEETGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHH-HHHhCCCEEEEEeccCCCCCHHHHHHHHH
Confidence 3457788888877888877766543321 1 122222 23344666766655543334444444444
Q ss_pred hhcCCCCCcEEEEeCCe---ecccchHHHHHHHHhc
Q 046608 96 KLIDDSGEPFFVLNSDV---ISEYPLKQMIEFHRGH 128 (256)
Q Consensus 96 ~i~~~~~~~~lv~~~D~---~~~~~~~~~~~~~~~~ 128 (256)
.+...+ .-.|..+|+ ..+..+.++++..++.
T Consensus 158 ~~~~~G--~~~i~l~DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 158 TAIDAG--ATVINIPDTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp HHHHTT--CCEEEEECSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHcC--CCEEEecCCCCCCCHHHHHHHHHHHHHh
Confidence 443322 235777888 3455577887776654
No 102
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=32.16 E-value=57 Score=25.51 Aligned_cols=44 Identities=7% Similarity=0.228 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhcc-CcEEE
Q 046608 33 MILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKL-EIKIT 76 (256)
Q Consensus 33 li~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~-~~~v~ 76 (256)
++.-+++.+.+.|+++++++.++....+...+++...++ ++.+.
T Consensus 98 ~l~di~~sl~~~G~rrlvivNgHGGN~l~~a~~~l~~~~~~~~v~ 142 (254)
T 3lub_A 98 ILEDIVSSLHVQGFRKLLILSGHGGNNFKGMIRDLAFEYPDFLIA 142 (254)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESCTTCCCHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHHHHCCCcEEE
Confidence 566677888999999999999877433554455544443 45443
No 103
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=30.65 E-value=1.4e+02 Score=24.25 Aligned_cols=97 Identities=15% Similarity=0.067 Sum_probs=54.5
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHH---------------HHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHH
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEV---------------MLNFLKEFEKKLEIKITCSQETEPLGTAGPLALAR 94 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~---------------i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~ 94 (256)
++.-++..++.+..+|++.|.+..+-..-. +.+.++ +.+..+..+.+..+..+.-+.+-+....
T Consensus 79 ~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~-~a~~~g~~v~f~~~d~~~~~~~~~~~~~ 157 (325)
T 3eeg_A 79 KEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVK-QAKKVVHEVEFFCEDAGRADQAFLARMV 157 (325)
T ss_dssp CHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHH-HHHTTSSEEEEEEETGGGSCHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHH-HHHHCCCEEEEEccccccchHHHHHHHH
Confidence 445677778888877888877765433211 112222 2233467777766655444444444444
Q ss_pred hhhcCCCCCcEEEEeCCe---ecccchHHHHHHHHhcC
Q 046608 95 DKLIDDSGEPFFVLNSDV---ISEYPLKQMIEFHRGHG 129 (256)
Q Consensus 95 ~~i~~~~~~~~lv~~~D~---~~~~~~~~~~~~~~~~~ 129 (256)
+.+...+ .-.|..+|+ ..+..+.++++..++.-
T Consensus 158 ~~~~~~G--~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 158 EAVIEAG--ADVVNIPDTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp HHHHHHT--CSEEECCBSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHhcC--CCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 4433222 235788888 34555778887766543
No 104
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=30.33 E-value=52 Score=22.75 Aligned_cols=27 Identities=15% Similarity=0.400 Sum_probs=21.9
Q ss_pred eeCCcchHHHHHHHHHHcCCCEEEEEc
Q 046608 27 DFANKPMILHQIEALKAVGVTEVVLAI 53 (256)
Q Consensus 27 ~i~g~pli~~~l~~l~~~~i~~i~vv~ 53 (256)
..+|+||.+++++.++++|+.-..+.-
T Consensus 21 ~~~g~pL~~~Iv~~a~~~GiaGaTV~r 47 (127)
T 2dcl_A 21 KWEGRPLYKVIVEKLREMGIAGATVYR 47 (127)
T ss_dssp EETTEEHHHHHHHHHHHTTCSCEEEEE
T ss_pred ccCCcCHHHHHHHHHHHCCCCeEEEEc
Confidence 447999999999999999986655543
No 105
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=29.82 E-value=63 Score=22.80 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=31.7
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+-|+++.++.+.+.|+.++.+.+..+++.-..+.++.
T Consensus 76 G~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~ 113 (141)
T 2d4p_A 76 LRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAE 113 (141)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHC
Confidence 45799999999999999999999988877666666553
No 106
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=28.85 E-value=1.6e+02 Score=21.16 Aligned_cols=69 Identities=14% Similarity=0.045 Sum_probs=43.5
Q ss_pred HHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc
Q 046608 37 QIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE 115 (256)
Q Consensus 37 ~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~ 115 (256)
.|+.|++.|+ ++.++++.....+...++.. ++.-.+... .+-...+..+++.++-.. .-++.-||...+
T Consensus 54 ~l~~L~~~g~-~~~i~T~~~~~~~~~~~~~l----gl~~~f~~~---~~K~~~~~~~~~~~g~~~--~~~~~vGD~~nD 122 (189)
T 3mn1_A 54 GIKMLIASGV-TTAIISGRKTAIVERRAKSL----GIEHLFQGR---EDKLVVLDKLLAELQLGY--EQVAYLGDDLPD 122 (189)
T ss_dssp HHHHHHHTTC-EEEEECSSCCHHHHHHHHHH----TCSEEECSC---SCHHHHHHHHHHHHTCCG--GGEEEEECSGGG
T ss_pred HHHHHHHCCC-EEEEEECcChHHHHHHHHHc----CCHHHhcCc---CChHHHHHHHHHHcCCCh--hHEEEECCCHHH
Confidence 7899999987 78888988777777766654 443222211 233467777777775432 234445888754
No 107
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=28.80 E-value=45 Score=22.55 Aligned_cols=26 Identities=15% Similarity=0.291 Sum_probs=21.0
Q ss_pred eeCCcchHHHHHHHHHHcCCCEEEEE
Q 046608 27 DFANKPMILHQIEALKAVGVTEVVLA 52 (256)
Q Consensus 27 ~i~g~pli~~~l~~l~~~~i~~i~vv 52 (256)
..+|+||.+++++.++++|+.-..|.
T Consensus 25 ~~~g~pL~~~Iv~~~~~~GiaGaTV~ 50 (114)
T 1o51_A 25 KHSGKPLFEYLVKRAYELGMKGVTVY 50 (114)
T ss_dssp EETTEEHHHHHHHHHHHTTCSCCEEE
T ss_pred ccCCeEHHHHHHHHHHHCCCCeEEEE
Confidence 35799999999999999997654443
No 108
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=28.54 E-value=72 Score=21.43 Aligned_cols=37 Identities=11% Similarity=0.252 Sum_probs=26.9
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-..+.++
T Consensus 87 G~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k 123 (144)
T 2pdo_A 87 ANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYER 123 (144)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHH
Confidence 4579999999999989999888776555444444444
No 109
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=28.16 E-value=1.6e+02 Score=20.87 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=44.0
Q ss_pred HHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc
Q 046608 37 QIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE 115 (256)
Q Consensus 37 ~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~ 115 (256)
.|+.|++.|+ .+.|+++.....+...++.. ++. .+. . ...-...+..+++.++-.. .-++.-||...+
T Consensus 47 ~l~~L~~~g~-~~~i~T~~~~~~~~~~~~~l----gi~-~~~-~--~~~k~~~l~~~~~~~~~~~--~~~~~vGD~~nD 114 (176)
T 3mmz_A 47 GIAALRKSGL-TMLILSTEQNPVVAARARKL----KIP-VLH-G--IDRKDLALKQWCEEQGIAP--ERVLYVGNDVND 114 (176)
T ss_dssp HHHHHHHTTC-EEEEEESSCCHHHHHHHHHH----TCC-EEE-S--CSCHHHHHHHHHHHHTCCG--GGEEEEECSGGG
T ss_pred HHHHHHHCCC-eEEEEECcChHHHHHHHHHc----CCe-eEe-C--CCChHHHHHHHHHHcCCCH--HHEEEEcCCHHH
Confidence 6889999987 67888877777777666654 455 222 1 2344677777777776432 234567888765
No 110
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=27.50 E-value=2.2e+02 Score=23.06 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHcCCCEEEEEccCChH-HHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCC
Q 046608 33 MILHQIEALKAVGVTEVVLAINYQPE-VMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSD 111 (256)
Q Consensus 33 li~~~l~~l~~~~i~~i~vv~~~~~~-~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D 111 (256)
.+..+-+.+.+.|..++.|+++.... ...+.+.+.-+..++++..... .+.++.+.+..+ +.+...+.+.++-+.|=
T Consensus 21 ~~~~l~~~l~~~g~~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~-~~~~~~~~v~~~-~~~~~~~~d~IIavGGG 98 (354)
T 3ce9_A 21 KIYNIGQIIKKGNFKRVSLYFGEGIYELFGETIEKSIKSSNIEIEAVET-VKNIDFDEIGTN-AFKIPAEVDALIGIGGG 98 (354)
T ss_dssp CGGGHHHHHGGGTCSEEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEE-ECCCBHHHHHHH-HTTSCTTCCEEEEEESH
T ss_pred HHHHHHHHHHhcCCCeEEEEECccHHHHHHHHHHHHHHHcCCeEEEEec-CCCCCHHHHHHH-HHhhhcCCCEEEEECCh
Confidence 44555556666677899999987632 2233333222222555543332 345577888888 77765443233334443
Q ss_pred eecccchHHHHHH
Q 046608 112 VISEYPLKQMIEF 124 (256)
Q Consensus 112 ~~~~~~~~~~~~~ 124 (256)
.+.+ .-+++..
T Consensus 99 sv~D--~aK~vA~ 109 (354)
T 3ce9_A 99 KAID--AVKYMAF 109 (354)
T ss_dssp HHHH--HHHHHHH
T ss_pred HHHH--HHHHHHh
Confidence 4433 4555553
No 111
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=27.34 E-value=79 Score=21.34 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=27.9
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 91 g~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k 127 (160)
T 3f8k_A 91 GTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRK 127 (160)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHH
Confidence 4579999999998889999998887766554445544
No 112
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=27.24 E-value=75 Score=21.86 Aligned_cols=37 Identities=11% Similarity=0.003 Sum_probs=28.7
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 113 g~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k 149 (166)
T 4evy_A 113 ATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRS 149 (166)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHH
Confidence 4579999999999999999998887776555555544
No 113
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=27.21 E-value=41 Score=25.78 Aligned_cols=10 Identities=40% Similarity=0.381 Sum_probs=9.0
Q ss_pred CeEEEEeCCC
Q 046608 1 MKALILVGGF 10 (256)
Q Consensus 1 m~aiIlaaG~ 10 (256)
|+++|+|+|.
T Consensus 1 Mkv~Iv~gG~ 10 (223)
T 3k94_A 1 MIIHIVGGGP 10 (223)
T ss_dssp CEEEEECSSC
T ss_pred CEEEEEeCCC
Confidence 9999999985
No 114
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=26.93 E-value=80 Score=21.53 Aligned_cols=38 Identities=11% Similarity=0.041 Sum_probs=28.8
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+.|+.++++.+.+.|+..+.+.+...+..-....++.
T Consensus 113 g~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~ 150 (165)
T 1s3z_A 113 AKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQAL 150 (165)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHc
Confidence 45799999999999899999988877665555555543
No 115
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=26.31 E-value=48 Score=26.53 Aligned_cols=92 Identities=9% Similarity=-0.046 Sum_probs=48.5
Q ss_pred cchHHHHHHHHHHcCC-CEEEEEccCC-hHHHHHHHHhhhhccCcEEEeeccCCcCCC---cHHHHHHHhhhcCCCCCcE
Q 046608 31 KPMILHQIEALKAVGV-TEVVLAINYQ-PEVMLNFLKEFEKKLEIKITCSQETEPLGT---AGPLALARDKLIDDSGEPF 105 (256)
Q Consensus 31 ~pli~~~l~~l~~~~i-~~i~vv~~~~-~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~---~~s~~~~~~~i~~~~~~~~ 105 (256)
-+-++.+++....-.+ -+|..|++.. .+ +.....++++++...+... .+. ...+...++..+.+ +
T Consensus 100 g~nl~~ll~~~~~g~l~~~i~~Visn~p~~-----~~~~A~~~gIp~~~~~~~~-~~r~~~~~~~~~~l~~~~~D----l 169 (288)
T 3obi_A 100 DHCLADILYRWRVGDLHMIPTAIVSNHPRE-----TFSGFDFGDIPFYHFPVNK-DTRRQQEAAITALIAQTHTD----L 169 (288)
T ss_dssp CHHHHHHHHHHHTTSSCEEEEEEEESSCGG-----GSCCTTTTTCCEEECCCCT-TTHHHHHHHHHHHHHHHTCC----E
T ss_pred CCCHHHHHHHHHCCCCCeEEEEEEcCCChh-----HHHHHHHcCCCEEEeCCCc-ccHHHHHHHHHHHHHhcCCC----E
Confidence 3566667777665433 3666666544 33 2233445588876543221 111 12455555666554 8
Q ss_pred EEEeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 106 FVLNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 106 lv~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
+|+.|-+ +++ ..+++.+. ..++-.++.
T Consensus 170 ivlagy~~il~---~~~l~~~~----~~~iNiHpS 197 (288)
T 3obi_A 170 VVLARYMQILS---DEMSARLA----GRCINIHHS 197 (288)
T ss_dssp EEESSCCSCCC---HHHHHHTT----TSEEEEEEE
T ss_pred EEhhhhhhhCC---HHHHhhhc----CCeEEeCcc
Confidence 8888887 666 44444322 234555554
No 116
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=26.20 E-value=74 Score=21.51 Aligned_cols=37 Identities=3% Similarity=0.071 Sum_probs=28.4
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 92 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~ 128 (162)
T 3lod_A 92 GEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTR 128 (162)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHH
Confidence 4579999999999989999988887766555555554
No 117
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=26.02 E-value=83 Score=21.15 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=29.4
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+-|+.++++.+...|+..+.+.+...+.......++.
T Consensus 106 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 143 (164)
T 4e0a_A 106 GRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSL 143 (164)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHHc
Confidence 45799999999999999999998877665555555543
No 118
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=25.52 E-value=1.4e+02 Score=22.61 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=45.4
Q ss_pred eEEEEeCCCCCccccCCCCCCCccceeCCcchHHHHHHHHHHcCCCEEEEEccCC--hHHHHHHHHhhhhccCcEEEe-e
Q 046608 2 KALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVTEVVLAINYQ--PEVMLNFLKEFEKKLEIKITC-S 78 (256)
Q Consensus 2 ~aiIlaaG~g~Rl~~~~~~~pK~ll~i~g~pli~~~l~~l~~~~i~~i~vv~~~~--~~~i~~~~~~~~~~~~~~v~~-~ 78 (256)
+++|+|+|.-..+ |+.. ++ .--.+.=.+.+.+.|+.--+++...+ .++..+++++. +++++. .
T Consensus 3 ~~~I~~gG~~~~~-------~~~~-~~--~i~~DgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~----~~~i~~~~ 68 (218)
T 3ihk_A 3 KVALFSGGDLTYF-------TRDF-DY--FVGIDKGSSFLLKNQLPLDLAIGDFDSVSAEEFKQIKAK----AKKLVMAP 68 (218)
T ss_dssp EEEEECSSCCSCC-------CCCC-SE--EEEETHHHHHHHHTTCCCSEEEECCTTSCHHHHHHHHTT----CSSEEECC
T ss_pred EEEEEECCCCccC-------cccC-CE--EEEEcHHHHHHHHcCCCCCEEEeCcccCCHHHHHHHHhc----CCeEEECC
Confidence 5888888864322 2211 11 00134556777778865555555433 23444444432 455543 3
Q ss_pred ccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe
Q 046608 79 QETEPLGTAGPLALARDKLIDDSGEPFFVLNSDV 112 (256)
Q Consensus 79 ~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~ 112 (256)
++...+.+.-|+..+.+..+.. .++ +.|-+
T Consensus 69 ~eKD~TD~e~Al~~a~~~~~~~---~I~-i~Ga~ 98 (218)
T 3ihk_A 69 AEKNDTDTELALKTIFDCFGRV---EII-VFGAF 98 (218)
T ss_dssp SSCSSCHHHHHHHHHHHHTSSC---EEE-EESCS
T ss_pred CCCCCCHHHHHHHHHHHhCCCC---EEE-EECCC
Confidence 3333344455666666543333 344 45544
No 119
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=25.52 E-value=83 Score=21.95 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=26.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHH
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLK 65 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~ 65 (256)
|+.|+.++++.+.+.|+..+.+.+...+..-..+.+
T Consensus 106 G~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~ 141 (170)
T 2bei_A 106 GSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYK 141 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHH
Confidence 468999999999999999988877665544333333
No 120
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=25.46 E-value=1e+02 Score=24.70 Aligned_cols=91 Identities=7% Similarity=0.014 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHcCC-CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCC---cHHHHHHHhhhcCCCCCcEEE
Q 046608 32 PMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT---AGPLALARDKLIDDSGEPFFV 107 (256)
Q Consensus 32 pli~~~l~~l~~~~i-~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~---~~s~~~~~~~i~~~~~~~~lv 107 (256)
+-++.+++....-.+ -+|..|++...+ ..... .++++++...+... .+. ...+...++..+.+ ++|
T Consensus 107 ~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~A----~~~gIp~~~~~~~~-~~r~~~~~~~~~~l~~~~~D----liv 176 (292)
T 3lou_A 107 HCLADLLFRWKMGELKMDIVGIVSNHPD-FAPLA----AQHGLPFRHFPITA-DTKAQQEAQWLDVFETSGAE----LVI 176 (292)
T ss_dssp HHHHHHHHHHHHTSSCCEEEEEEESSST-THHHH----HHTTCCEEECCCCS-SCHHHHHHHHHHHHHHHTCS----EEE
T ss_pred cCHHHHHHHHHcCCCCcEEEEEEeCcHH-HHHHH----HHcCCCEEEeCCCc-CCHHHHHHHHHHHHHHhCCC----EEE
Confidence 466667776655432 356655543322 12222 33478876543221 111 13455556666654 888
Q ss_pred EeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 108 LNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 108 ~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
+.|-+ +.+ ..+++.+. ..++-.++.
T Consensus 177 la~y~~il~---~~~l~~~~----~~~iNiHpS 202 (292)
T 3lou_A 177 LARYMQVLS---PEASARLA----NRAINIHHS 202 (292)
T ss_dssp ESSCCSCCC---HHHHHHTT----TSEEEEEEE
T ss_pred ecCchhhCC---HHHHhhhc----CCeEEeCCC
Confidence 88887 666 44444322 234555554
No 121
>3abq_B Ethanolamine ammonia-lyase light chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_B* 3abr_B* 3abs_B* 3any_B* 3ao0_B*
Probab=24.41 E-value=81 Score=25.34 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=37.1
Q ss_pred CcchHHHHHHHHHHcC--CCEEEEEccCC---hHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHH
Q 046608 30 NKPMILHQIEALKAVG--VTEVVLAINYQ---PEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLA 91 (256)
Q Consensus 30 g~pli~~~l~~l~~~~--i~~i~vv~~~~---~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~ 91 (256)
..|++..++..|...| +..++++..-. .++|.+.+.. ++.+..+.+..+.++++|+-
T Consensus 189 a~~~l~aL~~~L~~~g~~vap~v~v~qgRValgDeIge~L~A-----~~vvvLIGERPGLss~dSlg 250 (306)
T 3abq_B 189 YEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGA-----KVVILLVGERPGLGQSESLS 250 (306)
T ss_dssp HHHHHHHHHHHHHTTTCCBCCCEEEETCCTTHHHHHHHHHTC-----SEEEEEEECCCCSSCCCCEE
T ss_pred HHHHHHHHHHHHHhcCCCcCCeEEEeeCeehHHHHHHHHHCC-----CEEEEEEeCCCCCCCcccce
Confidence 3478888899998776 34556655322 4566666653 56667777777777766653
No 122
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=24.38 E-value=61 Score=25.86 Aligned_cols=92 Identities=7% Similarity=0.027 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHHcCC-CEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCC---cHHHHHHHhhhcCCCCCcEE
Q 046608 31 KPMILHQIEALKAVGV-TEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGT---AGPLALARDKLIDDSGEPFF 106 (256)
Q Consensus 31 ~pli~~~l~~l~~~~i-~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~---~~s~~~~~~~i~~~~~~~~l 106 (256)
-+-++.+|+....-.+ -+|..|++...+ ..... .++++++...+... .+. ...+...++..+.+ ++
T Consensus 101 g~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~A----~~~gIp~~~~~~~~-~~r~~~~~~~~~~l~~~~~D----li 170 (286)
T 3n0v_A 101 DHCLNDLLYRQRIGQLGMDVVAVVSNHPD-LEPLA----HWHKIPYYHFALDP-KDKPGQERKVLQVIEETGAE----LV 170 (286)
T ss_dssp CHHHHHHHHHHHTTSSCCEEEEEEESSST-THHHH----HHTTCCEEECCCBT-TBHHHHHHHHHHHHHHHTCS----EE
T ss_pred CCCHHHHHHHHHCCCCCcEEEEEEeCcHH-HHHHH----HHcCCCEEEeCCCc-CCHHHHHHHHHHHHHhcCCC----EE
Confidence 3566777777665322 356655543322 22222 33478776543221 111 12455566666654 88
Q ss_pred EEeCCe-ecccchHHHHHHHHhcCCceEEEEEec
Q 046608 107 VLNSDV-ISEYPLKQMIEFHRGHGGEASIMVTKV 139 (256)
Q Consensus 107 v~~~D~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 139 (256)
|+.|-+ +.+ ..+++.+. ..++-.++.
T Consensus 171 vla~y~~il~---~~~l~~~~----~~~iNiHpS 197 (286)
T 3n0v_A 171 ILARYMQVLS---PELCRRLD----GWAINIHHS 197 (286)
T ss_dssp EESSCCSCCC---HHHHHHTT----TSEEEEEEC
T ss_pred EecccccccC---HHHHhhhc----CCeEEeccc
Confidence 888887 666 44444322 234555554
No 123
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=24.31 E-value=1.8e+02 Score=20.00 Aligned_cols=71 Identities=11% Similarity=0.110 Sum_probs=43.1
Q ss_pred HHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeec
Q 046608 35 LHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVIS 114 (256)
Q Consensus 35 ~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~ 114 (256)
...|+.+++.|+ +++++++.....+...++.. ++...+.. .......+..+++.++-.. .-++.-||...
T Consensus 42 ~~~l~~l~~~g~-~~~i~T~~~~~~~~~~l~~~----gl~~~~~~---~kp~~~~~~~~~~~~~~~~--~~~~~vGD~~~ 111 (162)
T 2p9j_A 42 GIGIKLLQKMGI-TLAVISGRDSAPLITRLKEL----GVEEIYTG---SYKKLEIYEKIKEKYSLKD--EEIGFIGDDVV 111 (162)
T ss_dssp HHHHHHHHTTTC-EEEEEESCCCHHHHHHHHHT----TCCEEEEC---C--CHHHHHHHHHHTTCCG--GGEEEEECSGG
T ss_pred HHHHHHHHHCCC-EEEEEeCCCcHHHHHHHHHc----CCHhhccC---CCCCHHHHHHHHHHcCCCH--HHEEEECCCHH
Confidence 467888888876 68888887777777777654 44333321 2334566667777665432 23556777764
Q ss_pred c
Q 046608 115 E 115 (256)
Q Consensus 115 ~ 115 (256)
+
T Consensus 112 D 112 (162)
T 2p9j_A 112 D 112 (162)
T ss_dssp G
T ss_pred H
Confidence 3
No 124
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=23.94 E-value=91 Score=20.87 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=28.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+.+.|+..+.+.+...+..-....++
T Consensus 86 g~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k 122 (157)
T 1mk4_A 86 GKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTK 122 (157)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHH
Confidence 4579999999998888999998887766555555554
No 125
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=23.76 E-value=2e+02 Score=21.84 Aligned_cols=32 Identities=9% Similarity=-0.147 Sum_probs=22.8
Q ss_pred eeCCcchHHHHHHHHHHcCCCEEEEEccCChH
Q 046608 27 DFANKPMILHQIEALKAVGVTEVVLAINYQPE 58 (256)
Q Consensus 27 ~i~g~pli~~~l~~l~~~~i~~i~vv~~~~~~ 58 (256)
-..+........+.|.+.|..+|.++.+....
T Consensus 99 ~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~ 130 (280)
T 3gyb_A 99 ANDDFRGAEIATKHLIDLGHTHIAHLRVGSGA 130 (280)
T ss_dssp EECHHHHHHHHHHHHHHTTCCSEEEECCSSHH
T ss_pred EechHHHHHHHHHHHHHCCCCeEEEEeCCCch
Confidence 33445556666677777899999999987654
No 126
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=23.63 E-value=3.1e+02 Score=22.61 Aligned_cols=98 Identities=12% Similarity=0.027 Sum_probs=54.9
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChH-----------HHHHHHH---hhhhccCcEEEeeccCCcCCCcHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPE-----------VMLNFLK---EFEKKLEIKITCSQETEPLGTAGPLALARD 95 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~-----------~i~~~~~---~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~ 95 (256)
+..-++..++.+..+|.+.|.+...-..- ++.+.+. .+.+..+..+.+..+..+.-..+-+....+
T Consensus 85 ~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~ 164 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICG 164 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHH
Confidence 55677888888888998877766643321 1112211 123344666777666544444444443333
Q ss_pred hhcCCCCCcEEEEeCCe---ecccchHHHHHHHHhcC
Q 046608 96 KLIDDSGEPFFVLNSDV---ISEYPLKQMIEFHRGHG 129 (256)
Q Consensus 96 ~i~~~~~~~~lv~~~D~---~~~~~~~~~~~~~~~~~ 129 (256)
.+...+ .-.|..+|+ ..+..+.++++...+.-
T Consensus 165 ~~~~~G--a~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 165 AVIEAG--ATTINIPDTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp HHHHHT--CCEEEEECSSSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHcC--CCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 333222 245777888 34555788887766543
No 127
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=23.63 E-value=95 Score=21.39 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=27.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 121 g~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k 157 (179)
T 2oh1_A 121 SKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVR 157 (179)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHH
Confidence 4579999999998889999988887665554444444
No 128
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=23.35 E-value=2e+02 Score=23.77 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=15.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEcc
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAIN 54 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~ 54 (256)
+.|.+.-.++.+.+.|+++|+++--
T Consensus 107 ~~P~i~d~l~~l~~~G~~~ivvlPl 131 (362)
T 1lbq_A 107 AKPLTAETYKQMLKDGVKKAVAFSQ 131 (362)
T ss_dssp SSSCHHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCHHHHHHHHHHcCCCeEEEEec
Confidence 4566666666666666666655543
No 129
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=23.35 E-value=91 Score=20.88 Aligned_cols=37 Identities=11% Similarity=0.087 Sum_probs=28.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+.+.|+..+.+.+...+..-....++
T Consensus 93 g~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k 129 (162)
T 2fia_A 93 GSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFES 129 (162)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHH
Confidence 4579999999999888999998887666555555554
No 130
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=23.34 E-value=98 Score=20.94 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=28.4
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++.
T Consensus 106 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 143 (174)
T 2cy2_A 106 GRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHL 143 (174)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHc
Confidence 45799999999988889999888876665555555543
No 131
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=23.21 E-value=1e+02 Score=20.63 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=27.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 96 g~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k 132 (163)
T 3d8p_A 96 GKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSN 132 (163)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHH
Confidence 3578999999998888999998887665544444444
No 132
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=22.94 E-value=99 Score=21.74 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=27.0
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+-+...+..-..+.++
T Consensus 108 G~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k 144 (180)
T 1tiq_A 108 GKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKK 144 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHH
Confidence 4689999999999889999998886555443334333
No 133
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=22.42 E-value=2.9e+02 Score=21.75 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=33.4
Q ss_pred EEEEccCChHHHHHHHHhhh---hc--cCcEEEeeccCCcC--CCcHHHHHHH----hhhcCCCCCcEEEEeCCeecccc
Q 046608 49 VVLAINYQPEVMLNFLKEFE---KK--LEIKITCSQETEPL--GTAGPLALAR----DKLIDDSGEPFFVLNSDVISEYP 117 (256)
Q Consensus 49 i~vv~~~~~~~i~~~~~~~~---~~--~~~~v~~~~~~~~~--g~~~s~~~~~----~~i~~~~~~~~lv~~~D~~~~~~ 117 (256)
|+|.+....+.+.+.+.+.. .+ ...+++++.+.... +.+.+.-.+. .....+ .++++++|.+...+
T Consensus 69 IIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d~~f~~a~a~N~G~~~al~~A~gd---~i~flD~D~i~~~d 145 (287)
T 2fy7_A 69 IIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYT---CFVFSDVDLIPMND 145 (287)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSCCCHHHHHHHHHHHHHHHSCCC---EEEEECTTEEESBT
T ss_pred EEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCCccchhhhhhhHHHHHHHhCCCC---EEEEECCCcccCCC
Confidence 44444444556666665543 11 13445544443222 2222232333 334443 89999999987665
No 134
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=22.28 E-value=1.1e+02 Score=20.73 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=28.5
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+.|+.++++.+...|+..+.+.+...+.......++.
T Consensus 100 g~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~ 137 (174)
T 3dr6_A 100 GRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSL 137 (174)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhC
Confidence 45799999999988899999887776665555555543
No 135
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=21.99 E-value=2.2e+02 Score=20.67 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=49.2
Q ss_pred cchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeC
Q 046608 31 KPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNS 110 (256)
Q Consensus 31 ~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~ 110 (256)
..-++..++.+.++ -++|+++.......+..++...-.+.+..+..... .+........++.+ .++++-+
T Consensus 31 ~~~i~~~~~~i~~a-~~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~------~~~~~~~~~~~~~~---dvvI~iS 100 (201)
T 3fxa_A 31 EEALVKTVEKIAEC-TGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTP------SDAVHGTLGVLQKE---DILILIS 100 (201)
T ss_dssp HHHHHHHHHHHHHC-SSCEEEECCTHHHHHHHHHHHHHHHTTCCEEECCH------HHHTTTGGGGCCTT---CEEEEEC
T ss_pred HHHHHHHHHHHHhc-CCcEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCc------hHHHhhhhhcCCCC---CEEEEEe
Confidence 34677788888876 12676665433444444444322333555543321 12222222344444 4665555
Q ss_pred CeecccchHHHHHHHHhcCCceEEEE
Q 046608 111 DVISEYPLKQMIEFHRGHGGEASIMV 136 (256)
Q Consensus 111 D~~~~~~~~~~~~~~~~~~~~~~i~~ 136 (256)
-.-...++.++++..++.++..+.++
T Consensus 101 ~sG~t~~~~~~~~~ak~~g~~vi~IT 126 (201)
T 3fxa_A 101 KGGNTGELLNLIPACKTKGSTLIGVT 126 (201)
T ss_dssp SSSCCHHHHTTHHHHHHHTCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHcCCeEEEEE
Confidence 44444456677777777776554444
No 136
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=21.88 E-value=1.5e+02 Score=24.89 Aligned_cols=38 Identities=5% Similarity=-0.070 Sum_probs=26.9
Q ss_pred CCCcHHHHHHHhhh---cCCCCCcEEEEeCCeecccchHHHHHH
Q 046608 84 LGTAGPLALARDKL---IDDSGEPFFVLNSDVISEYPLKQMIEF 124 (256)
Q Consensus 84 ~g~~~s~~~~~~~i---~~~~~~~~lv~~~D~~~~~~~~~~~~~ 124 (256)
.|-+.++..++... +.+ .+++++||...+..+.++++.
T Consensus 143 ~GKG~Am~aGl~~A~~~~gd---~Vv~~DaDl~iP~~v~~~~kg 183 (394)
T 2zu9_A 143 SGKGEGMLVGLLLAKAIGAE---YVGFVDADNYIPGAVNEYVKD 183 (394)
T ss_dssp CSHHHHHHHHHHHHHHTTCS---EEEECCSCBSCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhCCCC---EEEEEeCCCCCHHHHHHHHHH
Confidence 48888999999887 554 899999999333334455543
No 137
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=21.81 E-value=1.1e+02 Score=20.55 Aligned_cols=38 Identities=5% Similarity=0.088 Sum_probs=28.0
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+.|+.++++.+...|+..+.+.+......-....++.
T Consensus 106 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~ 143 (166)
T 2fe7_A 106 GRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSI 143 (166)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHc
Confidence 35799999999988889999888876665545555543
No 138
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=21.75 E-value=2.9e+02 Score=21.52 Aligned_cols=21 Identities=19% Similarity=0.458 Sum_probs=18.9
Q ss_pred cEEEEeCCeecccchHHHHHH
Q 046608 104 PFFVLNSDVISEYPLKQMIEF 124 (256)
Q Consensus 104 ~~lv~~~D~~~~~~~~~~~~~ 124 (256)
.++.+.+|+++..++.++.+.
T Consensus 103 kvlylD~D~iv~~di~~L~~~ 123 (276)
T 3tzt_A 103 EILYLDPDMLVINPLDDLLRT 123 (276)
T ss_dssp EEEEECSSEEECSCSHHHHTC
T ss_pred eEEEEeCCeeecCCHHHHhhc
Confidence 899999999998899998874
No 139
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=21.60 E-value=75 Score=22.87 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=28.2
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|++++++.+.+.|+..+.+.+...+..-..+.++
T Consensus 130 G~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k 166 (199)
T 1u6m_A 130 GSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYAS 166 (199)
T ss_dssp HHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHH
Confidence 4689999999999999999998887666544444443
No 140
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=21.53 E-value=96 Score=21.38 Aligned_cols=37 Identities=8% Similarity=0.195 Sum_probs=27.4
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+.++.+.+...+..-....++
T Consensus 99 G~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek 135 (166)
T 2ae6_A 99 GGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEK 135 (166)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHH
Confidence 4579999999998889999998887665444444443
No 141
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=21.50 E-value=1e+02 Score=20.91 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=27.1
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 99 g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k 135 (169)
T 3g8w_A 99 NRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSS 135 (169)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHH
Confidence 4579999999998889999988776665544444443
No 142
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=21.49 E-value=1.6e+02 Score=19.88 Aligned_cols=52 Identities=12% Similarity=0.101 Sum_probs=28.1
Q ss_pred eCCcchH--HHHHHHHHHcCCCEEEEEccCCh-HHHHHHHHhhhhccCcEEEeecc
Q 046608 28 FANKPMI--LHQIEALKAVGVTEVVLAINYQP-EVMLNFLKEFEKKLEIKITCSQE 80 (256)
Q Consensus 28 i~g~pli--~~~l~~l~~~~i~~i~vv~~~~~-~~i~~~~~~~~~~~~~~v~~~~~ 80 (256)
+.|.|++ +.+.+.+...+++.+++.+.... +...+.+.. ....++++...+.
T Consensus 46 i~g~pV~g~~~l~~~~~~~~id~viia~~~~~~~~~~~i~~~-l~~~gv~v~~vP~ 100 (141)
T 3nkl_A 46 MQGITIYRPKYLERLIKKHCISTVLLAVPSASQVQKKVIIES-LAKLHVEVLTIPN 100 (141)
T ss_dssp ETTEEEECGGGHHHHHHHHTCCEEEECCTTSCHHHHHHHHHH-HHTTTCEEEECCC
T ss_pred ecCeEEECHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHH-HHHcCCeEEECCC
Confidence 4555554 34444555567888888775443 333333332 2334777766543
No 143
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=21.20 E-value=2.3e+02 Score=20.09 Aligned_cols=94 Identities=5% Similarity=-0.151 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCe
Q 046608 33 MILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDV 112 (256)
Q Consensus 33 li~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~ 112 (256)
-++..++.+.+++ .+|+++.......+.+++...-.+.+..+..... .+........++.+ .++++-+-.
T Consensus 37 ~i~~~~~~i~~a~-~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~------~~~~~~~~~~~~~~---d~vI~iS~s 106 (183)
T 2xhz_A 37 NFTLACEKMFWCK-GKVVVMGMGASGHIGRKMAATFASTGTPSFFVHP------GEAAHGDLGMVTPQ---DVVIAISNS 106 (183)
T ss_dssp HHHHHHHHHHTCS-SCEEEEECHHHHHHHHHHHHHHHTTTCCEEECCT------THHHHHTSTTCCTT---CEEEEECSS
T ss_pred HHHHHHHHHHhCC-CeEEEEeecHHHHHHHHHHHHHHhcCceEEEeCc------hHHhhhhhccCCCC---CEEEEEeCC
Confidence 6778888888773 3677665333444444554332333555543321 12222222334443 466655544
Q ss_pred ecccchHHHHHHHHhcCCceEEEE
Q 046608 113 ISEYPLKQMIEFHRGHGGEASIMV 136 (256)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~i~~ 136 (256)
-...++.++++..++.+...+.++
T Consensus 107 G~t~~~~~~~~~ak~~g~~vi~IT 130 (183)
T 2xhz_A 107 GESSEITALIPVLKRLHVPLICIT 130 (183)
T ss_dssp SCCHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEE
Confidence 444456777777777777554444
No 144
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=20.85 E-value=2.5e+02 Score=20.45 Aligned_cols=69 Identities=14% Similarity=0.134 Sum_probs=43.8
Q ss_pred HHHHHHHcCCCEEEEEccCChHHHHHHHHhhhhccCcEEEeeccCCcCCCcHHHHHHHhhhcCCCCCcEEEEeCCeecc
Q 046608 37 QIEALKAVGVTEVVLAINYQPEVMLNFLKEFEKKLEIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISE 115 (256)
Q Consensus 37 ~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~g~~~s~~~~~~~i~~~~~~~~lv~~~D~~~~ 115 (256)
.|+.|++.|+ ++.|+++.....+...++.. ++.-.+.. .......+..+++.++-.. .=++.-||...+
T Consensus 60 ~l~~L~~~G~-~~~ivT~~~~~~~~~~l~~l----gi~~~~~~---~k~k~~~~~~~~~~~~~~~--~~~~~vGD~~nD 128 (195)
T 3n07_A 60 GVKALMNAGI-EIAIITGRRSQIVENRMKAL----GISLIYQG---QDDKVQAYYDICQKLAIAP--EQTGYIGDDLID 128 (195)
T ss_dssp HHHHHHHTTC-EEEEECSSCCHHHHHHHHHT----TCCEEECS---CSSHHHHHHHHHHHHCCCG--GGEEEEESSGGG
T ss_pred HHHHHHHCCC-EEEEEECcCHHHHHHHHHHc----CCcEEeeC---CCCcHHHHHHHHHHhCCCH--HHEEEEcCCHHH
Confidence 4889999986 67888888777777777654 45433321 2344567777777765432 234556887654
No 145
>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}
Probab=20.74 E-value=1.2e+02 Score=21.27 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=28.8
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHhh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF 67 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~~ 67 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++.
T Consensus 118 g~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~ 155 (187)
T 3pp9_A 118 GKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKC 155 (187)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHC
Confidence 45799999999988899999988877665555555543
No 146
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Probab=20.61 E-value=1.1e+02 Score=20.74 Aligned_cols=37 Identities=5% Similarity=0.124 Sum_probs=27.7
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+.+.|+..+.+.+...+..-....++
T Consensus 115 g~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k 151 (172)
T 2r1i_A 115 GSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEA 151 (172)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHH
Confidence 4579999999999888999988887665554444444
No 147
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=20.40 E-value=98 Score=20.41 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=27.3
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...+..-....++
T Consensus 101 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k 137 (152)
T 1qsm_A 101 GGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVK 137 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHH
Confidence 4579999999998888888888776665554445544
No 148
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Probab=20.33 E-value=1.3e+02 Score=20.36 Aligned_cols=37 Identities=16% Similarity=0.339 Sum_probs=27.6
Q ss_pred CcchHHHHHHHHHHcCCCEEEEEccCChHHHHHHHHh
Q 046608 30 NKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKE 66 (256)
Q Consensus 30 g~pli~~~l~~l~~~~i~~i~vv~~~~~~~i~~~~~~ 66 (256)
|+.|+.++++.+...|+..+.+.+...........++
T Consensus 79 g~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k 115 (157)
T 1y9k_A 79 GKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQK 115 (157)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHH
Confidence 4579999999998888999988887665544445544
Done!