BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046609
(399 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 184/294 (62%), Gaps = 8/294 (2%)
Query: 67 KIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKL-EGTNQDVAVKQLDRNGFQGNR-EFL 124
K FS REL VA+ NF+ N+LG GGFG+VY+G+L +GT VAVK+L QG +F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL--VAVKRLKEERXQGGELQFQ 83
Query: 125 VEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMK 184
EV M+SM + L+ L G+C+ +R+LVY YM NGS+ L + P ++ LDW R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 185 IAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
IA G+ARGL YLH+ P +I+RD KA+N+LLD++F + DFGLAKL D HV
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 202
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQN--LVTWATP 302
V GT G+ APEY TG+ + K+DV+ +GV+ LE+ITG+R D +R + + L+ W
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 303 LFKDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIE 356
L K+ +K + D L+GNY + + Q + VA +C Q RP MS+VV +E
Sbjct: 263 LLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 179/293 (61%), Gaps = 6/293 (2%)
Query: 67 KIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR-EFLV 125
K FS REL VA+ NF N+LG GGFG+VY+G+L VAVK+L QG +F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQT 76
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI 185
EV M+SM + L+ L G+C+ +R+LVY YM NGS+ L + P ++ LDW R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A G+ARGL YLH+ P +I+RD KA+N+LLD++F + DFGLAKL D HV V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAV 195
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQN--LVTWATPL 303
G G+ APEY TG+ + K+DV+ +GV+ LE+ITG+R D +R + + L+ W L
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 304 FKDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIE 356
K+ +K + D L+GNY + + Q + VA +C Q RP MS+VV +E
Sbjct: 256 LKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 174/300 (58%), Gaps = 13/300 (4%)
Query: 70 SYR----ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
SYR +L AT NF+ L+G G FG+VY+G L + VA+K+ QG EF
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESSQGIEEFET 84
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLL--DLPPNRKALDWNTRM 183
E+ LS +P+LV+L+G+C + ++ IL+Y+YM NG+L+ HL DLP ++ W R+
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRL 142
Query: 184 KIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
+I GAARGL YLH A +I+RD K+ N+LLD++F PK++DFG++K G D++H+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPL 303
V GT GY PEY + G+LT KSDVYSFGVV E++ R I S P E NL WA
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE- 258
Query: 304 FKDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKE 363
+ + + DP L + L + A CL + RP M DV+ +EY +E
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 172/300 (57%), Gaps = 13/300 (4%)
Query: 70 SYR----ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
SYR +L AT NF+ L+G G FG+VY+G L VA+K+ QG EF
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFET 84
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLL--DLPPNRKALDWNTRM 183
E+ LS +P+LV+L+G+C + ++ IL+Y+YM NG+L+ HL DLP ++ W R+
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRL 142
Query: 184 KIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
+I GAARGL YLH A +I+RD K+ N+LLD++F PK++DFG++K G ++H+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPL 303
V GT GY PEY + G+LT KSDVYSFGVV E++ R I S P E NL WA
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE- 258
Query: 304 FKDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKE 363
+ + + DP L + L + A CL + RP M DV+ +EY +E
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 172/307 (56%), Gaps = 28/307 (9%)
Query: 69 FSYRELCVATTNFNP------DNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQ 118
FS+ EL T NF+ N +GEGGFG VY+G + T VAVK+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 72
Query: 119 GNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKA 176
++F E+ +++ + LV L+G+ DGD LVY YMPNGSL D L LD P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---P 129
Query: 177 LDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG 236
L W+ R KIA GAA G+ +LHE+ I+RD K++N+LLD+ F K+SDFGLA+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 237 DKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
++ + +R++GT Y APE AL G++T KSD+YSFGVV LEIITG +D R E Q L
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 243
Query: 297 VTWATPLFKDRRKFTMMADPLLE--GNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTA 354
+ + + + D + + ++ +Y +VA+ CL E+ RP + V
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQL 300
Query: 355 IEYLAHS 361
++ + S
Sbjct: 301 LQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 171/307 (55%), Gaps = 28/307 (9%)
Query: 69 FSYRELCVATTNFNP------DNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQ 118
FS+ EL T NF+ N +GEGGFG VY+G + T VAVK+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 72
Query: 119 GNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKA 176
++F E+ +++ + LV L+G+ DGD LVY YMPNGSL D L LD P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---P 129
Query: 177 LDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG 236
L W+ R KIA GAA G+ +LHE+ I+RD K++N+LLD+ F K+SDFGLA+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 237 DKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
++ + R++GT Y APE AL G++T KSD+YSFGVV LEIITG +D R E Q L
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 243
Query: 297 VTWATPLFKDRRKFTMMADPLLE--GNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTA 354
+ + + + D + + ++ +Y +VA+ CL E+ RP + V
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQL 300
Query: 355 IEYLAHS 361
++ + S
Sbjct: 301 LQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 170/307 (55%), Gaps = 28/307 (9%)
Query: 69 FSYRELCVATTNFNP------DNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQ 118
FS+ EL T NF+ N +GEGGFG VY+G + T VAVK+L D +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 66
Query: 119 GNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKA 176
++F E+ +++ + LV L+G+ DGD LVY YMPNGSL D L LD P
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---P 123
Query: 177 LDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG 236
L W+ R KIA GAA G+ +LHE+ I+RD K++N+LLD+ F K+SDFGLA+
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 237 DKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
+ + R++GT Y APE AL G++T KSD+YSFGVV LEIITG +D R E Q L
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 237
Query: 297 VTWATPLFKDRRKFTMMADPLLE--GNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTA 354
+ + + + D + + ++ +Y +VA+ CL E+ RP + V
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQL 294
Query: 355 IEYLAHS 361
++ + S
Sbjct: 295 LQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 161/297 (54%), Gaps = 28/297 (9%)
Query: 69 FSYRELCVATTNFNP------DNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQ 118
FS+ EL T NF+ N GEGGFG VY+G + T VAVK+L D +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 63
Query: 119 GNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKA 176
++F E+ + + + LV L+G+ DGD LVY Y PNGSL D L LD P
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP---P 120
Query: 177 LDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG 236
L W+ R KIA GAA G+ +LHE+ I+RD K++N+LLD+ F K+SDFGLA+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 237 DKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
+ +R++GT Y APE AL G++T KSD+YSFGVV LEIITG +D R E Q L
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLL 234
Query: 297 VTWATPLFKDRRKFTMMADPLLE--GNYPIKGLYQALAVAAMCLQEEAGTRPMMSDV 351
+ + + + D + ++ Y +VA+ CL E+ RP + V
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXY---SVASQCLHEKKNKRPDIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 8/222 (3%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR--EFLVEVLML 130
++ + + N +G G FG V+R + G+ DVAVK L F R EFL EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS--DVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
L +P +V +G +V EY+ GSL LL R+ LD R+ +A+ A
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVA 147
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YLH + PP+++RD K+ N+L+D+ + K+ DFGL++L S GT
Sbjct: 148 KGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPE 204
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTE 292
+ APE KSDVYSFGV+ E+ T ++ N P +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 117/222 (52%), Gaps = 8/222 (3%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR--EFLVEVLML 130
++ + + N +G G FG V+R + G+ DVAVK L F R EFL EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS--DVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
L +P +V +G +V EY+ GSL LL R+ LD R+ +A+ A
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVA 147
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YLH + PP+++R+ K+ N+L+D+ + K+ DFGL++L + S S GT
Sbjct: 148 KGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPE 204
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTE 292
+ APE KSDVYSFGV+ E+ T ++ N P +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 31/214 (14%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLV 139
+ ++G GGFG+VYR G +VAVK D + Q E + +ML +P ++
Sbjct: 12 EEIIGIGGFGKVYRAFWIG--DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLD--LPPNRKALDWNTRMKIAHGAARGLEYLH 197
L G C+ LV E+ G L L +PP+ ++W ++ ARG+ YLH
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPD-ILVNWAVQI------ARGMNYLH 122
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP--------KLSDFGLAKLGPTGDKSHVSTRV--MG 247
+ A P+I+RD K+SN+L+ Q K++DFGLA+ + H +T++ G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAG 176
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
Y + APE + SDV+S+GV+ E++TG
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 150
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ L D H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 256
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 257 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 292
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 15/230 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G G VY T Q+VA++Q++ Q +E ++ E+L++ NP +VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ GD+ +V EY+ GSL D + + +D + + LE+LH + VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD K+ N+LL D + KL+DFG A++ P ++S ST V GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 195
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV-TWATPLFKDRRKFTMM 313
K D++S G++ +E+I G N P L+ T TP ++ K + +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G G VY T Q+VA++Q++ Q +E ++ E+L++ NP +VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ GD+ +V EY+ GSL D + + +D + + LE+LH + VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD K+ N+LL D + KL+DFG A++ P K + ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGP 195
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV-TWATPLFKDRRKFTMM 313
K D++S G++ +E+I G N P L+ T TP ++ K + +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 15/228 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G G VY T Q+VA++Q++ Q +E ++ E+L++ NP +VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ GD+ +V EY+ GSL D + + +D + + LE+LH + VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD K+ N+LL D + KL+DFG A++ P K + ++GT + APE
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGP 196
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV-TWATPLFKDRRKFT 311
K D++S G++ +E+I G N P L+ T TP ++ K +
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G G VY T Q+VA++Q++ Q +E ++ E+L++ NP +VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ GD+ +V EY+ GSL D + + +D + + LE+LH + VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD K+ N+LL D + KL+DFG A++ P K + ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGP 195
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV-TWATPLFKDRRKFTMM 313
K D++S G++ +E+I G N P L+ T TP ++ K + +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 73 ST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 125
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 237
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 238 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 127
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 239
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 240 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 275
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 25/214 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN-------REFLVEVLMLSMLSNPYLV 139
+G+GGFG V++G+L VA+K L +G +EF EV ++S L++P +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
L G + + +V E++P G L LLD + W+ ++++ A G+EY+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYM-QN 140
Query: 200 AQPPVIYRDFKASNVLLDQ-DFN----PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
PP+++RD ++ N+ L D N K++DFGL++ H + ++G + + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 255 EY--ALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
E A T K+D YSF ++ I+TG D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 130
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 242
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 243 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---I 152
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 264
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 265 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---I 153
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 265
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 266 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---I 130
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 242
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 243 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 125
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 237
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 238 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 273
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 15/228 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G G VY T Q+VA++Q++ Q +E ++ E+L++ NP +VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ GD+ +V EY+ GSL D + + +D + + LE+LH + VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+R+ K+ N+LL D + KL+DFG A++ P ++S ST V GT + APE
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 196
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV-TWATPLFKDRRKFT 311
K D++S G++ +E+I G N P L+ T TP ++ K +
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 147
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ D H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 253
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 254 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 149
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ D H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 255
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 256 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 154
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ D H T + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 260
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 261 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 150
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ D H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 256
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 257 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 292
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 87 LGEGGFGRVYRGKLEGT--NQD---VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V+ + QD VAVK L ++F E +L+ML + ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRK-----------ALDWNTRMKIAHGAA 190
G C +G ++V+EYM +G L L P+ K L + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+ YL A ++RD N L+ Q K+ DFG+++ + D V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ PE L + T +SDV+SFGVV EI T G++ TE + +T L + R
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR-- 260
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
A P + A+ C Q E R + DV ++ LA +
Sbjct: 261 ----ACP-----------PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 87 LGEGGFGRVYRGKLEG--TNQD---VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V+ + QD VAVK L ++F E +L+ML + ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRK-----------ALDWNTRMKIAHGAA 190
G C +G ++V+EYM +G L L P+ K L + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+ YL A ++RD N L+ Q K+ DFG+++ + D V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ PE L + T +SDV+SFGVV EI T G++ TE + +T L + R
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR-- 283
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
A P + A+ C Q E R + DV ++ LA +
Sbjct: 284 ----ACP-----------PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 87 LGEGGFGRVYRGKLEGT--NQD---VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V+ + QD VAVK L ++F E +L+ML + ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRK-----------ALDWNTRMKIAHGAA 190
G C +G ++V+EYM +G L L P+ K L + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+ YL A ++RD N L+ Q K+ DFG+++ + D V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ PE L + T +SDV+SFGVV EI T G++ TE + +T L + R
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR-- 254
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
A P + A+ C Q E R + DV ++ LA +
Sbjct: 255 ----ACP-----------PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 149
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ D H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 255
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 256 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 32/298 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G FG V++G T + VA+K +D + E + E+ +LS +PY+ G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + ++ EY+ GS D LL+ P LD I +GL+YLH + I
Sbjct: 75 LKDTKLWIIMEYLGGGSALD-LLEPGP----LDETQIATILREILKGLDYLHSEKK---I 126
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD KA+NVLL + KL+DFG+A G D +GT + APE +K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNY--P 323
+D++S G+ +E+ G P + L+ P P LEGNY P
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 231
Query: 324 IKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIEDSLDSCHHGRNSQ 381
+K +A CL +E RP +++ L ++K+ + + + +D + Q
Sbjct: 232 LKEFVEA------CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G+++L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFL-- 208
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ D H T + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 314
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 315 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 350
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 32/298 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G FG V++G T + VA+K +D + E + E+ +LS +PY+ G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + ++ EY+ GS D LL+ P LD I +GL+YLH + I
Sbjct: 75 LKDTKLWIIMEYLGGGSALD-LLEPGP----LDETQIATILREILKGLDYLHSEKK---I 126
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD KA+NVLL + KL+DFG+A G D +GT + APE +K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNY--P 323
+D++S G+ +E+ G P + L+ P P LEGNY P
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 231
Query: 324 IKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIEDSLDSCHHGRNSQ 381
+K +A CL +E RP +++ L ++K+ + + + +D + Q
Sbjct: 232 LKEFVEA------CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ 283
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 32/298 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G+G FG V++G T + VA+K +D + E+ +LS +PY+ G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + ++ EY+ GS D LL+ P LD I +GL+YLH + I
Sbjct: 90 LKDTKLWIIMEYLGGGSALD-LLEPGP----LDETQIATILREILKGLDYLHSEKK---I 141
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD KA+NVLL + KL+DFG+A G D +GT + APE +K
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNY--P 323
+D++S G+ +E+ G P + L+ P P LEGNY P
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 246
Query: 324 IKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIEDSLDSCHHGRNSQ 381
+K +A CL +E RP +++ L ++K+ + + + +D + Q
Sbjct: 247 LKEFVEA------CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQ 298
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---I 145
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA SH ++ G+ + APE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 257
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 258 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---I 153
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA SH ++ G+ + APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 265
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 266 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 301
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN-------REFLVEVLMLSMLSNPYLV 139
+G+GGFG V++G+L VA+K L +G +EF EV ++S L++P +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
L G + + +V E++P G L LLD + W+ ++++ A G+EY+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYM-QN 140
Query: 200 AQPPVIYRDFKASNVLLDQ-DFN----PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
PP+++RD ++ N+ L D N K++DFG ++ H + ++G + + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 255 EY--ALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
E A T K+D YSF ++ I+TG D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + + IA A+G++YLH + +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---I 125
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---GQ 261
I+RD K++N+ L +D K+ DFGLA SH ++ G+ + APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK--------VRSN 237
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
P K + + + A CL+++ RP+ ++ +IE LA S
Sbjct: 238 CP-KAMKRLM---AECLKKKRDERPLFPQILASIELLARS 273
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 141
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVS----TRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK + S T + A
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 247
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 248 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 283
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 148
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 254
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 255 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 144
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVS----TRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK + S T + A
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 250
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 251 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 130/279 (46%), Gaps = 29/279 (10%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 148
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK--LGPTGDKSHVSTRVMGTYGYCAPEY 256
A ++RD A N +LD+ F K++DFGLA+ H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 254
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 255 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 290
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN-------REFLVEVLMLSMLSNPYLV 139
+G+GGFG V++G+L VA+K L +G +EF EV ++S L++P +V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
L G + + +V E++P G L LLD + W+ ++++ A G+EY+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYM-QN 140
Query: 200 AQPPVIYRDFKASNVLLDQ-DFN----PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
PP+++RD ++ N+ L D N K++DF L++ H + ++G + + AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 255 EY--ALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
E A T K+D YSF ++ I+TG D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 149
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 255
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 256 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 147
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 253
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 254 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 149
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 255
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 256 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 146
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 252
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 253 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 288
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
T+ + LG G +G VY G + + VAVK L + + EFL E ++ + +P L
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 90
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
V L+G C +V EYMP G+L D+L + NR+ + + +A + +EYL +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLEK 148
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
I+RD A N L+ ++ K++DFGL++L TGD + APE
Sbjct: 149 KN---FIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 204
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ KSDV++FGV+ EI T
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 32/289 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G FG V++G T + VA+K +D + E + E+ +LS +PY+ G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + ++ EY+ GS D LL+ P LD I +GL+YLH + I
Sbjct: 95 LKDTKLWIIMEYLGGGSALD-LLEPGP----LDETQIATILREILKGLDYLHSEKK---I 146
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD KA+NVLL + KL+DFG+A G D +GT + APE +K
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNY--P 323
+D++S G+ +E+ G P + L+ P P LEGNY P
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 251
Query: 324 IKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIEDSLD 372
+K +A CL +E RP +++ L ++K+ + + + +D
Sbjct: 252 LKEFVEA------CLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELID 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 168
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 274
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 275 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 310
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
T+ + LG G FG VY G + + VAVK L + + EFL E ++ + +P L
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
V L+G C ++ E+M G+L D+L + NR+ + + +A + +EYL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
I+RD A N L+ ++ K++DFGL++L TGD + APE
Sbjct: 128 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + KSDV++FGV+ EI T
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 84 DNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLV 139
+ ++G G FG VY G L +G AVK L+R G +FL E +++ S+P ++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 140 NLVGYCVDGD-QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+L+G C+ + ++V YM +G L + + + N D + A+G++YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL-- 167
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS----HVSTRVMGTYGYCAP 254
A ++RD A N +LD+ F K++DFGLA+ DK H T + A
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMA 314
E T + T KSDV+SFGV+ E++T + P + N L + RR
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR------ 273
Query: 315 DPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAI 355
LL+ Y LY+ V C +A RP S++V+ I
Sbjct: 274 --LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 309
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 121
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 122 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPI 177
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + IA ARG++YLH + +
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL---TGQ 261
I+RD K++N+ L +D K+ DFGLA + SH ++ G+ + APE +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK--------VRSN 241
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLA 359
P + + A CL+++ RP ++ IE LA
Sbjct: 242 CPKR----MKRLMAECLKKKRDERPSFPRILAEIEELA 275
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 125
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPI 181
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN---REFLVEVLMLSMLSNP 136
+F NLLG+G F VYR + T +VA+K +D+ + EV + L +P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNR-KALDWNTRMKIAHGAARGLEY 195
++ L Y D + LV E NG + +L NR K N H G+ Y
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFMHQIITGMLY 127
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
LH +++RD SN+LL ++ N K++DFGLA + H + + GT Y +PE
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWA 300
A +SDV+S G +F ++ GR D N V A
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 125
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 181
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G N VA+K L + G FL E ++ L + LV L Y V
Sbjct: 17 LGNGQFGEVWMGTWNG-NTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L D +AL + +A A G+ Y+ I
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIERMN---YI 127
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +++N+L+ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E++T RV
Sbjct: 185 IKSDVWSFGILLTELVTKGRV 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
T+ + LG G +G VY G + + VAVK L + + EFL E ++ + +P L
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
V L+G C ++ E+M G+L D+L + NR+ + + +A + +EYL +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
I+RD A N L+ ++ K++DFGL++L TGD + APE
Sbjct: 128 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + KSDV++FGV+ EI T
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 121
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 122 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPI 177
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T VAVKQL +G R+F E+ +L L + ++V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 143 GYCV-DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G G Q + LV EY+P+G L D L +R LD + + + +G+EYL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
++RD A N+L++ + + K++DFGLAKL P DK + R G + APE
Sbjct: 148 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 203
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ +SDV+SFGVV E+ T
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T VAVKQL +G R+F E+ +L L + ++V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 143 GYCV-DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G G Q + LV EY+P+G L D L +R LD + + + +G+EYL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
++RD A N+L++ + + K++DFGLAKL P DK + R G + APE
Sbjct: 136 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 191
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ +SDV+SFGVV E+ T
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T VAVKQL +G R+F E+ +L L + ++V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 143 GYCV-DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G G Q + LV EY+P+G L D L +R LD + + + +G+EYL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
++RD A N+L++ + + K++DFGLAKL P DK + R G + APE
Sbjct: 135 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLS 190
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ +SDV+SFGVV E+ T
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 122
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 123 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPI 178
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 67
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 125
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 181
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 122
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 123 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 178
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 62
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 125
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 181
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 122
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 123 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 178
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 124
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 125 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 180
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ + + +A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQI 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ + + +A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQI 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 26 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 194 IKSDVWSFGILLTEIVTHGRI 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 195 IKSDVWSFGILLTEIVTHGRI 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G G FG V+ G N+D VA+K + R G +F+ E ++ LS+P LV L G C
Sbjct: 15 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ LV+E+M +G L D+ L R T + + G+ YL E+ VI
Sbjct: 72 LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD A N L+ ++ K+SDFG+ + D+ ST + +PE + ++K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 266 SDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPI 324
SDV+SFGV+ E+ + G+ +N +E ++ L+K R T
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH------------ 232
Query: 325 KGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
+YQ + C +E RP S ++ + +A S
Sbjct: 233 --VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 22 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 77
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 132
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 190 IKSDVWSFGILLTEIVTHGRI 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ + + +A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQI 125
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 126 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 181
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 75
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 133
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 134 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 189
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G G FG V+ G N+D VA+K + R G +F+ E ++ LS+P LV L G C
Sbjct: 13 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ LV+E+M +G L D+ L R T + + G+ YL E+ VI
Sbjct: 70 LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD A N L+ ++ K+SDFG+ + D+ ST + +PE + ++K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 266 SDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPI 324
SDV+SFGV+ E+ + G+ +N +E ++ L+K R T
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST------------- 229
Query: 325 KGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
+YQ + C +E RP S ++ + +A S
Sbjct: 230 -HVYQ---IMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 29 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 84
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 197 IKSDVWSFGILLTEIVTHGRI 217
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 23 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 78
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 133
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 191 IKSDVWSFGILLTEIVTHGRI 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ + + +A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQI 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 30 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 85
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 198 IKSDVWSFGILLTEIVTHGRI 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 195 IKSDVWSFGILLTEIVTHGRI 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 31 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 86
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 199 IKSDVWSFGILLTEIVTHGRI 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 27/278 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + IA ARG++YLH + +
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL---TGQ 261
I+RD K++N+ L +D K+ DFGLA SH ++ G+ + APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK--------VRSN 253
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLA 359
P + + A CL+++ RP ++ IE LA
Sbjct: 254 CPKR----MKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G G FG V+ G N+D VA+K + R G +F+ E ++ LS+P LV L G C
Sbjct: 18 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ LV+E+M +G L D+ L R T + + G+ YL E+ VI
Sbjct: 75 LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD A N L+ ++ K+SDFG+ + D+ ST + +PE + ++K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 266 SDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPI 324
SDV+SFGV+ E+ + G+ +N +E ++ L+K R T
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH------------ 235
Query: 325 KGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
+YQ + C +E RP S ++ + +A S
Sbjct: 236 --VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ + + +A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQI 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+RD A N L+ ++ K++DFGL++L TGD
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 176
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G G FG V+ G N+D VA+K + R G +F+ E ++ LS+P LV L G C
Sbjct: 15 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ LV+E+M +G L D+ L R T + + G+ YL E++ VI
Sbjct: 72 LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD A N L+ ++ K+SDFG+ + D+ ST + +PE + ++K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEE 293
SDV+SFGV+ E+ + ++ +R E
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 87 LGEGGFGRVYRGKLEGT--NQD---VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V+ + QD VAVK L ++F E +L+ L + ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNR---------KALDWNTRMKIAHGAARG 192
G CV+GD I+V+EYM +G L L P+ L + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 252
+ YL A ++RD N L+ ++ K+ DFG+++ + D V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + + T +SDV+S GVV EI T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
T+ + LG G +G VY G + + VAVK L + + EFL E ++ + +P L
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
V L+G C ++ E+M G+L D+L + NR+ + + +A + +EYL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
I+RD A N L+ ++ K++DFGL++L TGD + APE
Sbjct: 128 KN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLA 183
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + KSDV++FGV+ EI T
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 27/278 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG VY+GK G DVAVK L+ Q + F EV +L + ++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
Q +V ++ SL HL + + + IA ARG++YLH + +
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL---TGQ 261
I+RD K++N+ L +D K+ DFGLA SH ++ G+ + APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGN 321
+ +SDVY+FG+V E++TG+ N ++ + L D K + N
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK--------VRSN 253
Query: 322 YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLA 359
P + + A CL+++ RP ++ IE LA
Sbjct: 254 CPKR----MKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 87 LGEGGFGRVYRGK---LEGTNQD--VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V+ + L T VAVK L ++F E +L+ L + ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---------RKA---LDWNTRMKIAHGA 189
G C DGD I+V+EYM +G L L P+ R+A L + + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
A G+ YL A ++RD N L+ + K+ DFG+++ + D V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ PE + + T +SDV+SFGV+ EI T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 16 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 71
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 126
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 184 IKSDVWSFGILLTEIVTHGRI 204
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL- 141
LG+G FG V Y + T VAVKQL +G R+F E+ +L L + ++V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 142 -VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
V Y + LV EY+P+G L D L +R LD + + + +G+EYL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
++RD A N+L++ + + K++DFGLAKL P DK R G + APE
Sbjct: 132 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSPIFWYAPESLS 187
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ +SDV+SFGVV E+ T
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLM 129
++ + +F +LG+G FG+V+ + + TNQ A+K L ++ + + +VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 130 LSM-LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHG 188
LS+ +P+L ++ + V EY+ G L H+ + D + A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 127
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GL++LH ++YRD K N+LLD+D + K++DFG+ K GD + GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGT 182
Query: 249 YGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE L + D +SFGV+ E++ G+
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 126
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 184 IKSDVWSFGILLTELTTKGRV 204
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 25/239 (10%)
Query: 50 ITEELRKIGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKL----EGTNQ 105
+ E L G N +I EL +LG G FG VY+G E
Sbjct: 16 LVEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKI 68
Query: 106 DVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLE 164
VA+K L+ G + N EF+ E L+++ + +P+LV L+G C+ + LV + MP+G L
Sbjct: 69 PVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL 127
Query: 165 DHLLDLPPN---RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFN 221
+++ + N + L+W ++ A+G+ YL E +++RD A NVL+ +
Sbjct: 128 EYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEERR---LVHRDLAARNVLVKSPNH 178
Query: 222 PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
K++DFGLA+L +K + + + A E + T +SDV+S+GV E++T
Sbjct: 179 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 360 IKSDVWSFGILLTELTTKGRV 380
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 360 IKSDVWSFGILLTELTTKGRV 380
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 129
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 188 KSDVWSFGILLTELTTKGRV 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 19/224 (8%)
Query: 62 NNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNG 116
N + A+IF EL +LG G FG V++G E V +K + D++G
Sbjct: 21 NKVLARIFKETEL-------RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG 73
Query: 117 FQGNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA 176
Q + +L + L + ++V L+G C G LV +Y+P GSL DH+ +R A
Sbjct: 74 RQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ---HRGA 129
Query: 177 LDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG 236
L + A+G+ YL E +++R+ A NVLL +++DFG+A L P
Sbjct: 130 LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
Query: 237 DKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
DK + + + A E G+ T +SDV+S+GV E++T
Sbjct: 187 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 443 IKSDVWSFGILLTELTTKGRV 463
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 136/317 (42%), Gaps = 27/317 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR---EFLVEVLMLSMLSNPYLVNL 141
+ LG G FG+V GK E T VAVK L+R + + E+ L + +P+++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+V EY+ G L D++ LD ++ G++Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
V++RD K NVLLD N K++DFGL+ + G+ S G+ Y APE ++G+
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGR 190
Query: 262 LTA--KSDVYSFGVVFLEIITGRRVIDNSR-PTEEQNLV-------TWATPLFKDRRKFT 311
L A + D++S GV+ ++ G D+ PT + + + P K
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHM 250
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEE-ACIEDS 370
+ DP+ IK + + + P S + E L E+ C E+
Sbjct: 251 LQVDPMKRAT--IKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEE 308
Query: 371 LDSCHHGRNSQEPTAAA 387
+ SC + RN Q+P A A
Sbjct: 309 VLSCLYNRNHQDPLAVA 325
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 17 LGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 72
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 127
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+R+ +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 185 IKSDVWSFGILLTEIVTHGRI 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 29/277 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G G FG V+ G N+D VA+K + R G +F+ E ++ LS+P LV L G C
Sbjct: 16 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ LV E+M +G L D+ L R T + + G+ YL E+ VI
Sbjct: 73 LEQAPICLVTEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD A N L+ ++ K+SDFG+ + D+ ST + +PE + ++K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 266 SDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPI 324
SDV+SFGV+ E+ + G+ +N +E ++ L+K R T
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH------------ 233
Query: 325 KGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
+YQ + C +E RP S ++ + +A S
Sbjct: 234 --VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 308
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 366
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+R+ A N L+ ++ K++DFGL++L TGD
Sbjct: 367 SSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 422
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 302
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 360 IKSDVWSFGILLTELTTKGRV 380
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 46 RHRYITEELRKIGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKL----E 101
+ R + E L G+ N +I T F +LG G FG VY+G E
Sbjct: 23 QERELVEPLTPSGEAPNQALLRILK-------ETEFKKIKVLGSGAFGTVYKGLWIPEGE 75
Query: 102 GTNQDVAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPN 160
VA+ +L + + N+E L E +++ + NP++ L+G C+ + L+ + MP
Sbjct: 76 KVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPF 134
Query: 161 GSLEDHLLDLPPN---RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLD 217
G L D++ + N + L+W ++ A+G+ YL + +++RD A NVL+
Sbjct: 135 GCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVK 185
Query: 218 QDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLE 277
+ K++DFGLAKL +K + + + A E L T +SDV+S+GV E
Sbjct: 186 TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 245
Query: 278 IIT 280
++T
Sbjct: 246 LMT 248
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 194 IKSDVWSFGILLTELTTKGRV 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 266
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ ++ + +A
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQI 324
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+R+ A N L+ ++ K++DFGL++L TGD
Sbjct: 325 SSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 380
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G G FG V+ G N+D VA+K + + G +F+ E ++ LS+P LV L G C
Sbjct: 35 IGSGQFGLVHLGYW--LNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ LV+E+M +G L D+ L R T + + G+ YL E+ VI
Sbjct: 92 LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD A N L+ ++ K+SDFG+ + D+ ST + +PE + ++K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 266 SDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPI 324
SDV+SFGV+ E+ + G+ +N +E ++ L+K R T
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH------------ 252
Query: 325 KGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
+YQ + C +E RP S ++ + +A S
Sbjct: 253 --VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 121
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 122 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 125
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 184 KSDVWSFGILLTELTTKGRV 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 7/211 (3%)
Query: 70 SYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLM 129
+Y + + T+ + LG G +G VY G + + VAVK L + + EFL E +
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 269
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+ + +P LV L+G C ++ E+M G+L D+L + NR+ + + +A
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQI 327
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ +EYL + I+R+ A N L+ ++ K++DFGL++L TGD
Sbjct: 328 SSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPI 383
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + + KSDV++FGV+ EI T
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 137
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 138 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 60 GKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DR 114
G + A+IF EL +LG G FG V++G E V +K + D+
Sbjct: 1 GAMKVLARIFKETEL-------RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK 53
Query: 115 NGFQGNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNR 174
+G Q + +L + L + ++V L+G C G LV +Y+P GSL DH+ +R
Sbjct: 54 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ---HR 109
Query: 175 KALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGP 234
AL + A+G+ YL E +++R+ A NVLL +++DFG+A L P
Sbjct: 110 GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
Query: 235 TGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
DK + + + A E G+ T +SDV+S+GV E++T
Sbjct: 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLM 129
++ + +F +LG+G FG+V+ + + TNQ A+K L ++ + + +VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 130 LSM-LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHG 188
LS+ +P+L ++ + V EY+ G L H+ + D + A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 126
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GL++LH ++YRD K N+LLD+D + K++DFG+ K GD + GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGT 181
Query: 249 YGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE L + D +SFGV+ E++ G+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 127
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 186 KSDVWSFGILLTELTTKGRV 205
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 133
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 134 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G G V+ G G + VAVK L + G FL E ++ L + LV L Y V
Sbjct: 21 LGAGQAGEVWMGYYNGHTK-VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ I ++ EYM NGSL D L P+ L N + +A A G+ ++ E I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ + K++DFGLA+L + + + R + + APE G T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI+T R+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRI 209
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 15/197 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK +G DVAVK + + G EF E + LS+P LV G C
Sbjct: 16 LGSGQFGVVKLGKWKG-QYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY+ NG L ++L + K L+ + +++ + G+ +L ES Q I+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFL-ESHQ--FIH 127
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT---YGYCAPEYALTGQLT 263
RD A N L+D+D K+SDFG+ + D +VS+ +GT + APE + +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYS 183
Query: 264 AKSDVYSFGVVFLEIIT 280
+KSDV++FG++ E+ +
Sbjct: 184 SKSDVWAFGILMWEVFS 200
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 86 LLGEGGFGRVYRGKL----EGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVN 140
+LG G FG VY+G E VA+K L+ G + N EF+ E L+++ + +P+LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAARGLEYLH 197
L+G C+ + LV + MP+G L +++ + N + L+W ++ A+G+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYA 257
E +++RD A NVL+ + K++DFGLA+L +K + + + A E
Sbjct: 135 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ T +SDV+S+GV E++T
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSML 133
T +LG G FG VY+G E VA+K L N + N+E L E +++ +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
+PY+ L+G C+ + LV + MP G L DH+ + NR L + A+G+
Sbjct: 77 GSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRE---NRGRLGSQDLLNWCMQIAKGM 132
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
YL + +++RD A NVL+ + K++DFGLA+L + + + + A
Sbjct: 133 SYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
E L + T +SDV+S+GV E++T
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 29/208 (13%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 147 DGDQRI-LVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++ I +V EYM GSL D L L LP + +D + ++ + Y+H
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP---QLVDMSAQIASGMAYVERMNYVH- 134
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEY 256
RD +A+N+L+ ++ K++DFGLA+L + + + R + + APE
Sbjct: 135 --------RDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEA 183
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGRRV 284
AL G+ T KSDV+SFG++ E+ T RV
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 38/283 (13%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLV 139
F + +G+G FG VY+G T + VA+K +D + E+ +LS +PY+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G + + ++ EY+ GS D L P L+ I +GL+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-----LEETYIATILREILKGLDYLHSE 135
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT 259
+ I+RD KA+NVLL + + KL+DFG+A G D +GT + APE
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 260 GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLE 319
K+D++S G+ +E+ G + P L+ +P P LE
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLE 237
Query: 320 GNY--PIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAH 360
G + P K +A CL ++ RP TA E L H
Sbjct: 238 GQHSKPFKEFVEA------CLNKDPRFRP------TAKELLKH 268
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 152
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 153 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 147 DGDQRI-LVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++ I +V EYM GSL D L L LP + +D + ++ + Y+H
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP---QLVDMSAQIASGMAYVERMNYVH- 134
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYA 257
RD +A+N+L+ ++ K++DFGLA+L D + + + + APE A
Sbjct: 135 --------RDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 184
Query: 258 LTGQLTAKSDVYSFGVVFLEIITGRRV 284
L G+ T KSDV+SFG++ E+ T RV
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ + + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 124
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 125 EGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 28/283 (9%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y +GT + VAVK L + G Q + E+ +L L + +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 142 VGYCVD-GDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C D G++ + LV EY+P GSL D+L R ++ + A G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH-VSTRVMGTYGYCAPEYAL 258
I+R+ A NVLLD D K+ DFGLAK P G + + V + APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 259 TGQLTAKSDVYSFGVVFLEIITGRRVIDNSR--PTEEQNLVTWATPLFKDRRKFTMMADP 316
+ SDV+SFGV E++T D+S+ PT+ L+ A + + + +
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIA----QGQMTVLRLTEL 246
Query: 317 LLEGN---YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIE 356
L G P K + + C + EA RP +++ ++
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 28/283 (9%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y +GT + VAVK L + G Q + E+ +L L + +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 142 VGYCVD-GDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C D G++ + LV EY+P GSL D+L R ++ + A G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH-VSTRVMGTYGYCAPEYAL 258
I+R+ A NVLLD D K+ DFGLAK P G + + V + APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 259 TGQLTAKSDVYSFGVVFLEIITGRRVIDNSR--PTEEQNLVTWATPLFKDRRKFTMMADP 316
+ SDV+SFGV E++T D+S+ PT+ L+ A + + + +
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIA----QGQMTVLRLTEL 246
Query: 317 LLEGN---YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIE 356
L G P K + + C + EA RP +++ ++
Sbjct: 247 LERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM G L D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM G L D L K L + +A A G+ Y+ +
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 136
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGTYGYCAPEYALTGQLTA 264
+RD +A+N+L+ ++ K++DFGLA+L D + + + + APE AL G+ T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 195 KSDVWSFGILLTELTTKGRV 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGLA++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y +GT + VAVK L + G Q + E+ +L L + +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 142 VGYCVDGDQRIL--VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C D L V EY+P GSL D+L R ++ + A G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH-VSTRVMGTYGYCAPEYAL 258
I+RD A NVLLD D K+ DFGLAK P G + + V + APE
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 259 TGQLTAKSDVYSFGVVFLEIITGRRVIDNSR--PTEEQNLVTWATPLFKDRRKFTMMADP 316
+ SDV+SFGV E++T D+S+ PT+ L+ A + + + +
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIA----QGQMTVLRLTEL 263
Query: 317 LLEGN---YPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIE 356
L G P K + + C + EA RP +++ ++
Sbjct: 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +L G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 130
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 189
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG+G FG V+ G GT + VA+K L + G FL E ++ L + LV L Y V
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ I +V EYM GSL D L K L + +A A G+ Y+ +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMN---YV 303
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTGQLT 263
+RD +A+N+L+ ++ K++DFGL +L + + + R + + APE AL G+ T
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 264 AKSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ E+ T RV
Sbjct: 361 IKSDVWSFGILLTELTTKGRV 381
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +L G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFG AKL +K + +
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 129
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 188
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +L G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFGLAKL +K + +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFG AKL +K + +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 136
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 195
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 50/287 (17%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+ ++G G FG V + K +DVA+KQ++ + F+VE+ LS +++P +V L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRA--KDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPP-----NRKALDWNTRMKIAHGAARGLEYLHE 198
C++ LV EY GSL + L P A+ W + ++G+ YLH
Sbjct: 69 ACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHS 120
Query: 199 SAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYA 257
+I+RD K N+LL K+ DFG A ++H+ T G+ + APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVF 175
Query: 258 LTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWAT------PLFKDRRKFT 311
+ K DV+S+G++ E+IT R+ D + + WA PL K+ K
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWAVHNGTRPPLIKNLPK-- 231
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYL 358
PI+ L C ++ RP M ++V + +L
Sbjct: 232 -----------PIESL------MTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 190
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFG AKL +K + +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A +F E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRG--KLEGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLVN 140
D LG G FG V +G ++ DVA+K L + + + E + E ++ L NPY+V
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L+G C + +LV E G L L+ R+ + + ++ H + G++YL E
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K LG D S+ + R G + + APE
Sbjct: 131 ---FVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECI 185
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ +++SDV+S+GV E ++
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 50/287 (17%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+ ++G G FG V + K +DVA+KQ++ + + F+VE+ LS +++P +V L G
Sbjct: 14 EEVVGRGAFGVVCKAKWRA--KDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPP-----NRKALDWNTRMKIAHGAARGLEYLHE 198
C++ LV EY GSL + L P A+ W + ++G+ YLH
Sbjct: 70 ACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHS 121
Query: 199 SAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYA 257
+I+RD K N+LL K+ DFG A ++H+ T G+ + APE
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVF 176
Query: 258 LTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWAT------PLFKDRRKFT 311
+ K DV+S+G++ E+IT R+ D + + WA PL K+ K
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWAVHNGTRPPLIKNLPK-- 232
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYL 358
PI+ L C ++ RP M ++V + +L
Sbjct: 233 -----------PIESL------MTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 137
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 196
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 138
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 197
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 162
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 221
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT--YGYCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPESLT 190
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 135
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 194
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 190
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 208
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFG AKL +K + +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFG AKL +K + +
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 208
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKL----EGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSML 133
T F +LG G FG VY+G E VA+K+L + + N+E L E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKIAHGAA 190
NP++ L+G C+ + L+ + MP G L D++ + N + L+W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+G+ YL + +++RD A NVL+ + K++DFG AKL +K + +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E L T +SDV+S+GV E++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 153/329 (46%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + K +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDE 265
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
+ P+ + P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 266 GYRLPPPM---DCP-AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 49/327 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 128
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 129 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + K +
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDE 236
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
+ P+ + P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 237 GYRLPPPM---DCP-AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 289
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDR 396
S AAAR S +L+D+
Sbjct: 290 S--------------AAARPSNLLLDQ 302
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 15/220 (6%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNR-EFLVE 126
E VA LG+G FG VY G +G +D VA+K ++ R EFL E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 127 VLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRKAL---DWN 180
++ + ++V L+G G +++ E M G L+ +L L P N L +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 181 TRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH 240
+++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ + D
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 241 VSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ + + +PE G T SDV+SFGVV EI T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 49/327 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 101
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 155
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 156 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 267
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 268 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 316
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDR 396
S AAAR S +L+D+
Sbjct: 317 S--------------AAARPSNLLLDQ 329
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 49/327 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 91
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 145
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 146 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + K +
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDE 253
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
+ P+ + P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 254 GYRLPPPM---DCP-AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 306
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDR 396
S AAAR S +L+D+
Sbjct: 307 S--------------AAARPSNLLLDQ 319
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y +GT + VAVK L G Q + E+ +L L + ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 142 VGYCVD-GDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C D G++ + LV EY+P GSL D+L R + + A G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH-VSTRVMGTYGYCAPEYAL 258
I+R A NVLLD D K+ DFGLAK P G + + V + APE
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ SDV+SFGV E++T
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRN-GFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y +GT + VAVK L G Q + E+ +L L + ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 142 VGYCVD-GDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C D G++ + LV EY+P GSL D+L R + + A G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH-VSTRVMGTYGYCAPEYAL 258
I+R A NVLLD D K+ DFGLAK P G + + V + APE
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ SDV+SFGV E++T
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L +++ +D ++ +G+EYL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 132
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+R+ N+L++ + K+ DFGL K+ P DK + + G + APE
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPESLT 191
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LGEG +G VY+ + T Q VA+KQ+ +E + E+ ++ +P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY GS+ D ++ L K L + I +GLEYLH + I+
Sbjct: 95 KNTDLWIVMEYCGAGSVSD-IIRL--RNKTLTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKS 266
RD KA N+LL+ + + KL+DFG+A G D V+GT + APE +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 267 DVYSFGVVFLEIITGR 282
D++S G+ +E+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 49/329 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V EYM NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL ++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDRKS 398
S AAAR S +L+D+ +
Sbjct: 319 S--------------AAARPSNLLLDQSN 333
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-----RNGFQGNREFLVEVLMLSMLSNPYLVNL 141
+G G FG VY+GK G DVAVK L FQ R EV +L + ++
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRN---EVAVLRKTRHVNILLF 97
Query: 142 VGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+GY D +V ++ SL HL + IA A+G++YLH
Sbjct: 98 MGYMTK-DNLAIVTQWCEGSSLYKHL---HVQETKFQMFQLIDIARQTAQGMDYLHAKN- 152
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL--- 258
+I+RD K++N+ L + K+ DFGLA + S + G+ + APE
Sbjct: 153 --IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 259 TGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLL 318
+ +SDVYS+G+V E++TG + S ++ F R + A P L
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQII------FMVGRGY---ASPDL 259
Query: 319 EGNYPIKGLYQALA-VAAMCLQEEAGTRPMMSDVVTAIEYLAHS 361
Y K +A+ + A C+++ RP+ ++++IE L HS
Sbjct: 260 SKLY--KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRG--KLEGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLVN 140
D LG G FG V +G ++ DVA+K L + + + E + E ++ L NPY+V
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L+G C + +LV E G L L+ R+ + + ++ H + G++YL E
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++R+ A NVLL K+SDFGL+K LG D S+ + R G + + APE
Sbjct: 457 ---FVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECI 511
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ +++SDV+S+GV E ++
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 60
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQD---VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V RG+L+ + VA+K L + G+ + REFL E ++ +P +
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ L G + +++ E+M NG+L D L L N + + G A G+ YL E
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGAL-DSFLRL--NDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMG---TYGYCAPE 255
+ ++RD A N+L++ + K+SDFGL++ T +G + APE
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 256 YALTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SD +S+G+V E+++
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTR------------MKI 185
++NL+G C ++ EY G+L ++L P +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ EY+P GSL D+L + + +D ++ +G+EYL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICKGMEYL---G 134
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT--YGYCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 106/228 (46%), Gaps = 52/228 (22%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNL---- 141
L+G G +G VY+G L+ + VAVK F + F+ E N Y V L
Sbjct: 20 LIGRGRYGAVYKGSLD--ERPVAVKVF---SFANRQNFINE-------KNIYRVPLMEHD 67
Query: 142 -VGYCVDGDQRI---------LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
+ + GD+R+ LV EY PNGSL +L + DW + ++AH R
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTR 122
Query: 192 GLEYLH------ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA------KLGPTGDKS 239
GL YLH + +P + +RD + NVL+ D +SDFGL+ +L G++
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKS--------DVYSFGVVFLEII 279
+ + +GT Y APE L G + + D+Y+ G+++ EI
Sbjct: 183 NAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 30/239 (12%)
Query: 60 GKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKL--EGTNQDVAVKQLDRNGF 117
GKNN I+ + + +++GEG FG+V + ++ +G D A+K++
Sbjct: 10 GKNNPDPTIYP----VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 65
Query: 118 QGN-REFLVEVLMLSMLSN-PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHL-----LDL 170
+ + R+F E+ +L L + P ++NL+G C L EY P+G+L D L L+
Sbjct: 66 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 125
Query: 171 PP-------NRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPK 223
P L + A ARG++YL +Q I+RD A N+L+ +++ K
Sbjct: 126 DPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAK 182
Query: 224 LSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
++DFGL++ G + +V + MG + A E T SDV+S+GV+ EI++
Sbjct: 183 IADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQG 119
A ++ E VA LG+G FG VY G +G +D VA+K ++
Sbjct: 33 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 92
Query: 120 NR-EFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRK 175
R EFL E ++ + ++V L+G G +++ E M G L+ +L L P N
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 176 AL---DWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL 232
L + +++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ +
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 233 GPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + +PE G T SDV+SFGVV EI T
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTR------------MKI 185
++NL+G C ++ EY G+L ++L P +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQD---VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V RG+L+ + VA+K L + G+ + REFL E ++ +P +
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ L G + +++ E+M NG+L D L L N + + G A G+ YL E
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGAL-DSFLRL--NDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMG---TYGYCAPE 255
+ ++RD A N+L++ + K+SDFGL++ T +G + APE
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 256 YALTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SD +S+G+V E+++
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y + + T + VAVK L +G + E+ +L L + +V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 142 VGYCV-DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C DG I L+ E++P+GSL+++L P N+ ++ ++K A +G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST---RVMGTYGYCAPEY 256
++RD A NVL++ + K+ DFGL K T DK + R + Y APE
Sbjct: 146 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDSPVFWY-APEC 200
Query: 257 ALTGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGV E++T
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 15/197 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK G DVA+K + + G EF+ E ++ LS+ LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
++ EYM NG L ++L ++ R +++ +EYL ES Q ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FLH 128
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT---YGYCAPEYALTGQLT 263
RD A N L++ K+SDFGL++ D + S+R G+ + PE + + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMYSKFS 184
Query: 264 AKSDVYSFGVVFLEIIT 280
+KSD+++FGV+ EI +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPPN-----------RKALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP + L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 15/220 (6%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNR-EFLVE 126
E VA LG+G FG VY G +G +D VA+K ++ R EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 127 VLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRKAL---DWN 180
++ + ++V L+G G +++ E M G L+ +L L P N L +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 181 TRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH 240
+++A A G+ YL+ + ++RD A N ++ +DF K+ DFG+ + D
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 241 VSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ + + +PE G T SDV+SFGVV EI T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPPN-----------RKALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP + L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNL 141
LGEG FG+V Y + + T + VAVK L +G + E+ +L L + +V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 142 VGYCV-DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
G C DG I L+ E++P+GSL+++L P N+ ++ ++K A +G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST---RVMGTYGYCAPEY 256
++RD A NVL++ + K+ DFGL K T DK + R + Y APE
Sbjct: 134 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIET-DKEXXTVKDDRDSPVFWY-APEC 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGV E++T
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPPN-----------RKALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP + L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPPN-----------RKALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP + L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK G DVA+K + + G EF+ E ++ LS+ LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
++ EYM NG L ++L ++ R +++ +EYL ES Q ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FLH 143
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKS 266
RD A N L++ K+SDFGL++ D+ S + PE + + ++KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 267 DVYSFGVVFLEIIT 280
D+++FGV+ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPPN-----------RKALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 87 LGEGGFGRV----YRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LG+G FG V Y + T + VAVK+L + + R+F E+ +L L + +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 143 GYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
G C +R L+ E++P GSL ++L +++ +D ++ +G+EYL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCAPEYAL 258
I+RD N+L++ + K+ DFGL K+ P DK + G + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLT 193
Query: 259 TGQLTAKSDVYSFGVVFLEIIT 280
+ + SDV+SFGVV E+ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPPN-----------RKALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK G DVA+K + + G EF+ E ++ LS+ LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
++ EYM NG L ++L ++ R +++ +EYL ES Q ++
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FLH 123
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKS 266
RD A N L++ K+SDFGL++ D+ S + PE + + ++KS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 267 DVYSFGVVFLEIIT 280
D+++FGV+ EI +
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 33/297 (11%)
Query: 78 TTNFNP-----DNLLGEGGFGRVYRGKLEGTNQD----VAVKQLDRNGFQGNR-EFLVEV 127
TT +P ++G G FG VY+G L+ ++ VA+K L + R +FL E
Sbjct: 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 128 LMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAH 187
++ S+ ++ L G +++ EYM NG+L+ L + L + +
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ---LVGMLR 154
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVM 246
G A G++YL A ++RD A N+L++ + K+SDFGL++ L + ++ ++
Sbjct: 155 GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKD 306
+ APE + T+ SDV+SFG+V E++T RP E + +
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-----YGERPYWELSNHEVMKAINDG 266
Query: 307 RRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKE 363
R T M P +YQ + C Q+E RP +D+V+ ++ L + +
Sbjct: 267 FRLPTPMDCP--------SAIYQLM---MQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 33/207 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----------EVLMLSMLSNP 136
LG G FGRV+ + + A+K L +E +V E LMLS++++P
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVL-------KKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--ARGLE 194
+++ + G D Q ++ +Y+ G L L RK+ + + + A LE
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLL------RKSQRFPNPVAKFYAAEVCLALE 120
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YLH +IYRD K N+LLD++ + K++DFG AK P V+ + GT Y AP
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAP 172
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E T D +SFG++ E++ G
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK G DVA+K + + G EF+ E ++ LS+ LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
++ EYM NG L ++L ++ R +++ +EYL ES Q ++
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FLH 127
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKS 266
RD A N L++ K+SDFGL++ D+ S + PE + + ++KS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 267 DVYSFGVVFLEIIT 280
D+++FGV+ EI +
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEES 488
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 489 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 49/327 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V E M NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + K +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDE 265
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
+ P+ + P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 266 GYRLPPPM---DCP-AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDR 396
S AAAR S +L+D+
Sbjct: 319 S--------------AAARPSNLLLDQ 331
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEES 146
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEES 146
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEES 489
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 490 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEES 144
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 145 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK G DVA+K + + G EF+ E ++ LS+ LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
++ EYM NG L ++L ++ R +++ +EYL ES Q ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FLH 143
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKS 266
RD A N L++ K+SDFGL++ D+ S + PE + + ++KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 267 DVYSFGVVFLEIIT 280
D+++FGV+ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-IELVHQVSMGMKYLEES 136
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 137 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 86 LLGEGGFGRVYRGKL---EGTNQDVAVK--QLDRNGFQGNREFLVEVLMLSMLSNPYLVN 140
+LGEG FG V G L +GT+ VAVK +LD + + EFL E + S+P ++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 141 LVGYCVDGDQR-----ILVYEYMPNGSLEDHLL--DLPPNRKALDWNTRMKIAHGAARGL 193
L+G C++ + +++ +M G L +LL L K + T +K A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYL ++RD A N +L D ++DFGL+K +GD + A
Sbjct: 161 EYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
E T+KSDV++FGV EI T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 76 VATTNFNPDNL-----LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLML 130
+ + +P +L LG G FG V GK G DVA+K + + G EF+ E ++
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVM 58
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
LS+ LV L G C ++ EYM NG L ++L ++ R +++
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVC 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+EYL ES Q ++RD A N L++ K+SDFGL++ D+ S
Sbjct: 116 EAMEYL-ESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVR 171
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ PE + + ++KSD+++FGV+ EI +
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGN-REFLVEVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + + + E+ M+ M+ +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTR------------MKI 185
++NL+G C ++ EY G+L ++L P +N +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A+ ARG+EYL A I+RD A NVL+ +D K++DFGLA+ D H+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 246 MGTYG-----YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
T G + APE T +SDV+SFGV+ EI T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-IELVHQVSMGMKYLEES 124
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 125 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-IELVHQVSMGMKYLEES 130
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 131 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 26/214 (12%)
Query: 85 NLLGEGGFGRVYRGKL--EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSN-PYLVN 140
+++GEG FG+V + ++ +G D A+K++ + + R+F E+ +L L + P ++N
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHL-----LDLPP-------NRKALDWNTRMKIAHG 188
L+G C L EY P+G+L D L L+ P L + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
ARG++YL +Q I+RD A N+L+ +++ K++DFGL++ G + +V + MG
Sbjct: 141 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGR 192
Query: 249 YG--YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E T SDV+S+GV+ EI++
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V GK G DVA+K + + G EF+ E ++ LS+ LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
++ EYM NG L ++L ++ R +++ +EYL ES Q ++
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYL-ESKQ--FLH 134
Query: 207 RDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKS 266
RD A N L++ K+SDFGL++ D+ S + PE + + ++KS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 267 DVYSFGVVFLEIIT 280
D+++FGV+ EI +
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%), Gaps = 49/327 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V E M NGSL+ L RK T +++ G A
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 158 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + + R
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMSNQDVIKAVDEGYRL 269
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
M P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 270 PPPMDCP--------AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDR 396
S AAAR S +L+D+
Sbjct: 319 S--------------AAARPSNLLLDQ 331
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-IELVHQVSMGMKYLEES 126
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D+++ + G + + APE
Sbjct: 127 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 49/327 (14%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLMLSML 133
TN + D ++G G FG V G+L+ ++ VA+K L + G+ + R+FL E ++
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF 74
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAA 190
+P ++ L G ++V E M NGSL+ L RK T +++ G A
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL------RKHDAQFTVIQLVGMLRGIA 128
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-Y 249
G++YL + ++RD A N+L++ + K+SDFGL+++ ++ +TR
Sbjct: 129 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRK 309
+ +PE + T+ SDV+S+G+V E+++ RP E + + K +
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDE 236
Query: 310 FTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIED 369
+ P+ + P LYQ + C Q++ RP +V+ ++ L + I
Sbjct: 237 GYRLPPPM---DCP-AALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 289
Query: 370 SLDSCHHGRNSQEPTAAARGSTVLMDR 396
S AAAR S +L+D+
Sbjct: 290 S--------------AAARPSNLLLDQ 302
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 81 FNPDNL-----LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSN 135
F P +L LG+G FG+ + T + + +K+L R + R FL EV ++ L +
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 136 PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALD----WNTRMKIAHGAAR 191
P ++ +G + + EY+ G+L + K++D W+ R+ A A
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-------KSMDSQYPWSQRVSFAKDIAS 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL------GPTGDKS------ 239
G+ YLH +I+RD + N L+ ++ N ++DFGLA+L P G +S
Sbjct: 120 GMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII 279
V+G + APE K DV+SFG+V EII
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 28/287 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+G+G FG V++G T Q VA+K +D + E + E+ +LS + Y+ G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ G + ++ EY+ GS D L P D + +GL+YLH + I
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGP-----FDEFQIATMLKEILKGLDYLHSEKK---I 142
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD KA+NVLL + + KL+DFG+A G D +GT + APE +K
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPIK 325
+D++S G+ +E+ G + P L+ P P L G++ K
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PTLVGDF-TK 246
Query: 326 GLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIEDSLD 372
+ + CL ++ RP +++ + +SK+ + + + +D
Sbjct: 247 SFKEFIDA---CLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELID 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNR-EFLVE 126
E VA LG+G FG VY G +G +D VA+K ++ R EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 127 VLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP---NRKAL---DWN 180
++ + ++V L+G G +++ E M G L+ +L L P N L +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 181 TRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH 240
+++A A G+ YL+ + ++RD A N + +DF K+ DFG+ + D
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 241 VSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ + + +PE G T SDV+SFGVV EI T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLML 130
+ + + + ++G G G V G+L Q VA+K L + G+ + R+FL E ++
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSEASIM 104
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---H 187
+P ++ L G G ++V EYM NGSL+ L R T M++
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL------RTHDGQFTIMQLVGMLR 158
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVM 246
G G+ YL + ++RD A NVL+D + K+SDFGL++ L D ++ +T
Sbjct: 159 GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII 279
+ APE ++ SDV+SFGVV E++
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------RKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++RD A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------RKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++RD A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 84 DNLLGEGGFGRVYRGKLE----GTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
D LG G FG V +G + V + + + N E L E ++ L NPY+V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
++G C + + +LV E G L +L NR D N +++ H + G++YL ES
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-IELVHQVSMGMKYLEES 130
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
++RD A NVLL K+SDFGL+K D++ + G + + APE
Sbjct: 131 N---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ ++KSDV+SFGV+ E +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------RKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++RD A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQ---DVAVKQLDRNGF--QGNREFLVEVLML 130
+ + + + ++G G G V G+L Q VA+K L + G+ + R+FL E ++
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLSEASIM 104
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---H 187
+P ++ L G G ++V EYM NGSL+ L R T M++
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL------RTHDGQFTIMQLVGMLR 158
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVM 246
G G+ YL + ++RD A NVL+D + K+SDFGL++ L D + +T
Sbjct: 159 GVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII 279
+ APE ++ SDV+SFGVV E++
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 29/281 (10%)
Query: 84 DNLLGEGGFGRVYRG--KLEGTNQ-DVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G KL G + VA+K L + G+ + R+FL E ++ +P +
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++L G ++V EYM NGSL+ L N + + G + G++YL +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSD 142
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYA 257
++RD A N+L++ + K+SDFGL+++ ++ +TR + APE
Sbjct: 143 MG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 258 LTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPL 317
+ T+ SDV+S+G+V E+++ RP E + + R + M P
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMTNQDVIKAVEEGYRLPSPMDCP- 253
Query: 318 LEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYL 358
LYQ + C Q+E +RP ++V ++ L
Sbjct: 254 -------AALYQLMLD---CWQKERNSRPKFDEIVNMLDKL 284
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G+G FG V G G VAVK + + + FL E +++ L + LV L+G V
Sbjct: 201 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + +V EYM GSL D+L R L + +K + +EYL + +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD A NVL+ +D K+SDFGL K T D + + + APE + +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFST 365
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI + RV
Sbjct: 366 KSDVWSFGILLWEIYSFGRV 385
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 26/214 (12%)
Query: 85 NLLGEGGFGRVYRGKL--EGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSN-PYLVN 140
+++GEG FG+V + ++ +G D A+K++ + + R+F E+ +L L + P ++N
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHL-----LDLPP-------NRKALDWNTRMKIAHG 188
L+G C L EY P+G+L D L L+ P L + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
ARG++YL +Q I+R+ A N+L+ +++ K++DFGL++ G + +V + MG
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGR 199
Query: 249 YG--YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E T SDV+S+GV+ EI++
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 17/199 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG-YC 145
LG+G FG+VY+ K + T A K ++ + +++VE+ +L+ +PY+V L+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
DG I++ E+ P G+++ +L+L + L + L +LH +I
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKR---II 139
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD KA NVL+ + + +L+DFG+ AK T K +GT + APE + +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCETMKD 196
Query: 265 -----KSDVYSFGVVFLEI 278
K+D++S G+ +E+
Sbjct: 197 TPYDYKADIWSLGITLIEM 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G+G FG V G G VAVK + + + FL E +++ L + LV L+G V
Sbjct: 29 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + +V EYM GSL D+L R L + +K + +EYL + +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 139
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD A NVL+ +D K+SDFGL K T D + + + APE + +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFST 193
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI + RV
Sbjct: 194 KSDVWSFGILLWEIYSFGRV 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
+GEG FGRV++ + G VAVK L + +F E +++ NP +V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA----LDWNTRMK------------ 184
L+G C G L++EYM G L + L + P+ D +TR +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 185 ----IAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH 240
IA A G+ YL E ++RD N L+ ++ K++DFGL++ + D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 241 VSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ PE + T +SDV+++GVV EI +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G+G FG V G G VAVK + + + FL E +++ L + LV L+G V
Sbjct: 14 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + +V EYM GSL D+L R L + +K + +EYL + +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD A NVL+ +D K+SDFGL K T D + + + APE + +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFST 178
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI + RV
Sbjct: 179 KSDVWSFGILLWEIYSFGRV 198
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 17/199 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG-YC 145
LG+G FG+VY+ K + T A K ++ + +++VE+ +L+ +PY+V L+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
DG I++ E+ P G+++ +L+L + L + L +LH +I
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKR---II 131
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD KA NVL+ + + +L+DFG+ AK T K +GT + APE + +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK---RDSFIGTPYWMAPEVVMCETMKD 188
Query: 265 -----KSDVYSFGVVFLEI 278
K+D++S G+ +E+
Sbjct: 189 TPYDYKADIWSLGITLIEM 207
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG V+ G+L N VAVK R + +FL E +L S+P +V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
C +V E + G D L L L T +++ AA G+EYL
Sbjct: 181 CTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
I+RD A N L+ + K+SDFG+++ G + + APE G+ ++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 265 KSDVYSFGVVFLEIIT 280
+SDV+SFG++ E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G+G FG V G G VAVK + + + FL E +++ L + LV L+G V
Sbjct: 20 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 147 DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ + +V EYM GSL D+L R L + +K + +EYL + +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD A NVL+ +D K+SDFGL K T D + + + APE +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFST 184
Query: 265 KSDVYSFGVVFLEIITGRRV 284
KSDV+SFG++ EI + RV
Sbjct: 185 KSDVWSFGILLWEIYSFGRV 204
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR-----NGFQGNREFLVEVLMLSMLS 134
N+ LGEG FG+V T Q VA+K +++ + QG E E+ L +L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYLRLLR 62
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P+++ L D+ I+V EY N L D R + + +E
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
Y H +++RD K N+LLD+ N K++DFGL+ + G+ S G+ Y AP
Sbjct: 118 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 171
Query: 255 EYALTGQLTA--KSDVYSFGVVFLEIITGRRVIDN-SRPTEEQNL 296
E ++G+L A + DV+S GV+ ++ R D+ S P +N+
Sbjct: 172 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR-----NGFQGNREFLVEVLMLSMLS 134
N+ LGEG FG+V T Q VA+K +++ + QG E E+ L +L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYLRLLR 72
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P+++ L D+ I+V EY N L D R + + +E
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
Y H +++RD K N+LLD+ N K++DFGL+ + G+ S G+ Y AP
Sbjct: 128 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 181
Query: 255 EYALTGQLTA--KSDVYSFGVVFLEIITGRRVIDN-SRPTEEQNL 296
E ++G+L A + DV+S GV+ ++ R D+ S P +N+
Sbjct: 182 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 225
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR-----NGFQGNREFLVEVLMLSMLS 134
N+ LGEG FG+V T Q VA+K +++ + QG E E+ L +L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYLRLLR 71
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P+++ L D+ I+V EY N L D R + + +E
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
Y H +++RD K N+LLD+ N K++DFGL+ + G+ S G+ Y AP
Sbjct: 127 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 180
Query: 255 EYALTGQLTA--KSDVYSFGVVFLEIITGRRVIDN-SRPTEEQNL 296
E ++G+L A + DV+S GV+ ++ R D+ S P +N+
Sbjct: 181 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 224
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 3 CFHYCCVAKEKFH------RKSIKKSIKGYREAKSLASFANISFKTESSRHRYITEELR- 55
C + V + FH R+ +I+ + + A + F++ S EE+
Sbjct: 77 CLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEV 136
Query: 56 KIGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRN 115
+ K K+ +T F Y +L LG+G FG+V K + T + A+K L +
Sbjct: 137 SLAKPKHRVTMNEFEYLKL------------LGKGTFGKVILVKEKATGRYYAMKILKKE 184
Query: 116 GFQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP 172
E L E +L +P+L L D+ V EY G L HL
Sbjct: 185 VIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----- 239
Query: 173 NRKALDWNTRMKIAHGA--ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA 230
+R+ + R + +GA L+YLH ++ V+YRD K N++LD+D + K++DFGL
Sbjct: 240 SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 231 KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
K G D + + T GT Y APE D + GVV E++ GR
Sbjct: 297 KEG-IKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 72 RELCVATTNFNPDNLLGEGGFGRVYRGKLEG-----TNQDVAVKQL-DRNGFQGNREFLV 125
+E+ ++ F + LGE FG+VY+G L G Q VA+K L D+ EF
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------------ 173
E ++ + L +P +V L+G +++ Y +G L + L+ P+
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ AL+ + + A G+EYL V+++D NVL+ N K+SD GL +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 234 PTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + APE + G+ + SD++S+GVV E+ +
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQD---VAVKQLDR-NGFQGNREFLVEVLMLSMLSNPYLV 139
D ++G+G FG VY G+ Q+ A+K L R Q FL E L++ L++P ++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 140 NLVGYCV--DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHG--AARGLEY 195
L+G + +G +L+ YM +G L + P R + I+ G ARG+EY
Sbjct: 86 ALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRS--PQRNP---TVKDLISFGLQVARGMEY 139
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR----VMGTYGY 251
L E ++RD A N +LD+ F K++DFGLA+ D+ + S + +
Sbjct: 140 LAEQK---FVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVKW 194
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
A E T + T KSDV+SFGV+ E++T R R + +L + L + RR
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLTHF---LAQGRR--- 246
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLA 359
L + Y LYQ V C + + RP +V +E +
Sbjct: 247 -----LPQPEYCPDSLYQ---VMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL------PPNRKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++RD A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR-----NGFQGNREFLVEVLMLSMLS 134
N+ LGEG FG+V T Q VA+K +++ + QG E E+ L +L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER--EISYLRLLR 66
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P+++ L D+ I+V EY N L D R + + +E
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
Y H +++RD K N+LLD+ N K++DFGL+ + G+ S G+ Y AP
Sbjct: 122 YCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAP 175
Query: 255 EYALTGQLTA--KSDVYSFGVVFLEIITGRRVIDN-SRPTEEQNL 296
E ++G+L A + DV+S GV+ ++ R D+ S P +N+
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 219
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYL 138
++ ++G G V + VA+K+++ Q + E L E+ +S +P +
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLED---HLLDLPPNRK-ALDWNTRMKIAHGAARGLE 194
V+ V D+ LV + + GS+ D H++ ++ LD +T I GLE
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG---DKSHVSTRVMGTYGY 251
YLH++ Q I+RD KA N+LL +D + +++DFG++ TG ++ V +GT +
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 252 CAPEYALTGQLTA---KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRR 308
APE + Q+ K+D++SFG+ +E+ TG P + L P
Sbjct: 193 MAPE--VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------ 244
Query: 309 KFTMMADPLLEGNYPIKGLYQALA-----VAAMCLQEEAGTRPMMSDVVTAIEYLAH 360
P LE K + + + ++CLQ++ RP TA E L H
Sbjct: 245 -------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP------TAAELLRH 288
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG V+ G+L N VAVK R + +FL E +L S+P +V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
C +V E + G D L L L T +++ AA G+EYL
Sbjct: 181 CTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
I+RD A N L+ + K+SDFG+++ G + + APE G+ ++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 265 KSDVYSFGVVFLEIIT 280
+SDV+SFG++ E +
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 72 RELCVATTNFNPDNLLGEGGFGRVYRGKLEG-----TNQDVAVKQL-DRNGFQGNREFLV 125
+E+ ++ F + LGE FG+VY+G L G Q VA+K L D+ EF
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------------ 173
E ++ + L +P +V L+G +++ Y +G L + L+ P+
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ AL+ + + A G+EYL V+++D NVL+ N K+SD GL +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 234 PTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
D + + + APE + G+ + SD++S+GVV E+ +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------RKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++RD A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYL 138
++ ++G G V + VA+K+++ Q + E L E+ +S +P +
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLED---HLLDLPPNRK-ALDWNTRMKIAHGAARGLE 194
V+ V D+ LV + + GS+ D H++ ++ LD +T I GLE
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG---DKSHVSTRVMGTYGY 251
YLH++ Q I+RD KA N+LL +D + +++DFG++ TG ++ V +GT +
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 252 CAPEYALTGQLTA---KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRR 308
APE + Q+ K+D++SFG+ +E+ TG P + L P
Sbjct: 188 MAPE--VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------ 239
Query: 309 KFTMMADPLLEGNYPIKGLYQALA-----VAAMCLQEEAGTRPMMSDVVTAIEYLAH 360
P LE K + + + ++CLQ++ RP TA E L H
Sbjct: 240 -------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP------TAAELLRH 283
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ +++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 84 DNLLGEGGFGRVYRG--KLEGTNQD-VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G KL G + VA+K L ++G+ + R+FL E ++ +P +
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++L G +++ E+M NGSL+ L N + + G A G++YL
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYL-- 151
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMG---TYGYCAPE 255
A ++RD A N+L++ + K+SDFGL++ T +G + APE
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 256 YALTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SDV+S+G+V E+++
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 84 DNLLGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G+L+ + VA+K L + G+ + R+FL E ++ +P +
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL-KVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA---HGAARGLEY 195
V+L G G ++V E+M NG+L+ L RK T +++ G A G+ Y
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFL------RKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG--YCA 253
L + ++RD A N+L++ + K+SDFGL+++ D V T G + A
Sbjct: 161 LADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTA 216
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + T+ SDV+S+G+V E+++
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLVGYC 145
LG GGFG V R + T + VA+KQ + NRE + +E+ ++ L++P +V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 81
Query: 146 VDGDQRI-------LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
DG Q++ L EY G L +L N L + + L YLHE
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 199 SAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K N++L Q K+ D G AK D+ + T +GT Y APE
Sbjct: 141 NR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPE 194
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITG-RRVIDNSRPTE 292
+ T D +SFG + E ITG R + N +P +
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLVGYC 145
LG GGFG V R + T + VA+KQ + NRE + +E+ ++ L++P +V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 80
Query: 146 VDGDQRI-------LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
DG Q++ L EY G L +L N L + + L YLHE
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 199 SAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K N++L Q K+ D G AK D+ + T +GT Y APE
Sbjct: 140 NR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPE 193
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITG-RRVIDNSRPTE 292
+ T D +SFG + E ITG R + N +P +
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S L++ +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 159 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S L++ +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 173 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
+++L+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV---EVLMLSMLSNPYLVNLVG 143
LGEG FG+V T Q VA+K + R + + + E+ L +L +P+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
++V EY G L D++++ +K + + + +EY H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRHK--- 128
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLT 263
+++RD K N+LLD + N K++DFGL+ + G+ S G+ Y APE + G+L
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKLY 184
Query: 264 A--KSDVYSFGVVFLEIITGRRVIDN 287
A + DV+S G+V ++ GR D+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSM 132
+ +F+ ++G GGFG VY + T + A+K LD+ QG L E +MLS+
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 133 LSN---PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI-AHG 188
+S P++V + D+ + + M G L HL ++ + M+ A
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAE 299
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GLE++H V+YRD K +N+LLD+ + ++SD GLA + K H S +GT
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 352
Query: 249 YGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITG 281
+GY APE G + +D +S G + +++ G
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSM 132
+ +F+ ++G GGFG VY + T + A+K LD+ QG L E +MLS+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 133 LSN---PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI-AHG 188
+S P++V + D+ + + M G L HL ++ + M+ A
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAE 300
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GLE++H V+YRD K +N+LLD+ + ++SD GLA + K H S +GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 249 YGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITG 281
+GY APE G + +D +S G + +++ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSM 132
+ +F+ ++G GGFG VY + T + A+K LD+ QG L E +MLS+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 133 LSN---PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI-AHG 188
+S P++V + D+ + + M G L HL ++ + M+ A
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAE 300
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GLE++H V+YRD K +N+LLD+ + ++SD GLA + K H S +GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 249 YGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITG 281
+GY APE G + +D +S G + +++ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ Y G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSM 132
+ +F+ ++G GGFG VY + T + A+K LD+ QG L E +MLS+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 133 LSN---PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI-AHG 188
+S P++V + D+ + + M G L HL ++ + M+ A
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAE 300
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GLE++H V+YRD K +N+LLD+ + ++SD GLA + K H S +GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 249 YGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITG 281
+GY APE G + +D +S G + +++ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++ L+G C ++ EY G+L ++L PP NR + + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G + + VAVK L + G + FL E ++ L + LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 147 DGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
+ ++ EYM GSL D L + LP K +D++ ++ A G+ Y+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLP---KLIDFSAQI------AEGMAYIERK 129
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
I+RD +A+NVL+ + K++DFGLA++ + + + R + + APE
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAI 183
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
G T KSDV+SFG++ EI+T
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQD---VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G+L+ + VA+K L + G+ + R+FL E ++ +P +
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++L G +++ EYM NGSL+ L N + + G G++YL +
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRK---NDGRFTVIQLVGMLRGIGSGMKYLSD 149
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYA 257
+ ++RD A N+L++ + K+SDFG++++ ++ +TR + APE
Sbjct: 150 MS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SDV+S+G+V E+++
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN---REFLVEVLMLSMLSNPYLVNLVG 143
+G G FG VY + ++ VA+K++ +G Q N ++ + EV L L +P + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
+ LV EY GS D LL++ ++K L + HGA +GL YLH
Sbjct: 122 CYLREHTAWLVMEYC-LGSASD-LLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---G 260
+I+RD KA N+LL + KL DFG A + + +GT + APE L G
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEG 228
Query: 261 QLTAKSDVYSFGVVFLEI 278
Q K DV+S G+ +E+
Sbjct: 229 QYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN---REFLVEVLMLSMLSNPYLVNLVG 143
+G G FG VY + ++ VA+K++ +G Q N ++ + EV L L +P + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
+ LV EY GS D LL++ ++K L + HGA +GL YLH
Sbjct: 83 CYLREHTAWLVMEYC-LGSASD-LLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT---G 260
+I+RD KA N+LL + KL DFG A + + +GT + APE L G
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEG 189
Query: 261 QLTAKSDVYSFGVVFLEI 278
Q K DV+S G+ +E+
Sbjct: 190 QYDGKVDVWSLGITCIEL 207
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 158 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 158 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 175 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 159 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------RKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++R+ A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 185 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 165 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQD---VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G+L+ + VA+K L + G+ + R+FL E ++ +P +
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++L G +++ EYM NGSL+ L N + + G G++YL +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRK---NDGRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYA 257
+ ++RD A N+L++ + K+SDFG++++ ++ +TR + APE
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SDV+S+G+V E+++
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN------RKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG---- 250
YL+ ++RD A N ++ DF K+ DFG+ T D + G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGM-----TRDIYETAYYRKGGKGLLPV 196
Query: 251 -YCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE G T SD++SFGVV EI +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQD---VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G+L+ + VA+K L + G+ + R+FL E ++ +P +
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++L G +++ EYM NGSL+ L N + + G G++YL +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRK---NDGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYA 257
+ ++RD A N+L++ + K+SDFG++++ ++ +TR + APE
Sbjct: 129 MS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 258 LTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SDV+S+G+V E+++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 173 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-------VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPY 137
LGEG FG+V + G ++D VAVK L + + + LV E+ M+ M+ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-LDLPP--------NR---KALDWNTRMKI 185
++NL+G C ++ Y G+L ++L PP NR + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+ ARG+EYL A I+RD A NVL+ ++ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 87 LGEGGFGRVYRGK----LEGTNQD-VAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVN 140
LG+G FG VY G ++G + VAVK ++ + R EFL E ++ + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL------PPNRKALDWNTRMKIAHGAARGLE 194
L+G G ++V E M +G L+ +L L P R +++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YL+ ++R+ A N ++ DF K+ DFG+ + D + + + AP
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E G T SD++SFGVV EI +
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 159 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 86 LLGEGGFGRVY------RGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
+LG GGFG V+ GKL + + R G+QG +VE +L+ + + ++V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
+L LV M G + H+ ++ + + GLE+LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLA---KLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q +IYRD K NVLLD D N ++SD GLA K G T K + GT G+ APE
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGR 282
L + D ++ GV E+I R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 150 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 3 CFHYCCVAKEKFH------RKSIKKSIKGYREAKSLASFANISFKTESSRHRYITEELR- 55
C + V + FH R+ +I+ + + F++ S EE+
Sbjct: 80 CLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDFRSGSPSDNSGAEEMEV 139
Query: 56 KIGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRN 115
+ K K+ +T F Y +L LG+G FG+V K + T + A+K L +
Sbjct: 140 SLAKPKHRVTMNEFEYLKL------------LGKGTFGKVILVKEKATGRYYAMKILKKE 187
Query: 116 GFQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPP 172
E L E +L +P+L L D+ V EY G L HL
Sbjct: 188 VIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----- 242
Query: 173 NRKALDWNTRMKIAHGA--ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA 230
+R+ + R + +GA L+YLH ++ V+YRD K N++LD+D + K++DFGL
Sbjct: 243 SRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 231 KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
K G D + + T GT Y APE D + GVV E++ GR
Sbjct: 300 KEG-IKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 86 LLGEGGFGRVY------RGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
+LG GGFG V+ GKL + + R G+QG +VE +L+ + + ++V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
+L LV M G + H+ ++ + + GLE+LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLA---KLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q +IYRD K NVLLD D N ++SD GLA K G T K + GT G+ APE
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGR 282
L + D ++ GV E+I R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 173 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 137 YLVNLVGYCVDGDQRILV-YEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARG 192
+ V L +C D+++ Y NG L ++ RK ++ TR A
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSA 149
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 252
LEYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y
Sbjct: 150 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIITG 281
+PE SD+++ G + +++ G
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 176 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQL-DRNGFQGNREFLVEVLMLSMLSNPYLVN 140
LG G FG VY G++ G D VAVK L + Q +FL+E L++S ++ +V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDL---PPNRKALDWNTRMKIAHGAARGLEYLH 197
+G + R ++ E M G L+ L + P +L + +A A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ I+RD A N LL P K+ DFG+A+ M +
Sbjct: 199 ENH---FIHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIIT 280
PE + G T+K+D +SFGV+ EI +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 86 LLGEGGFGRVY------RGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
+LG GGFG V+ GKL + + R G+QG +VE +L+ + + ++V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
+L LV M G + H+ ++ + + GLE+LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLA---KLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q +IYRD K NVLLD D N ++SD GLA K G T K + GT G+ APE
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGR 282
L + D ++ GV E+I R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 86 LLGEGGFGRVY------RGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
+LG GGFG V+ GKL + + R G+QG +VE +L+ + + ++V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIV 248
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
+L LV M G + H+ ++ + + GLE+LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLA---KLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q +IYRD K NVLLD D N ++SD GLA K G T K + GT G+ APE
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPEL 360
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITGR 282
L + D ++ GV E+I R
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 84 DNLLGEGGFGRVYRG--KLEGTNQD-VAVKQLDRNGF--QGNREFLVEVLMLSMLSNPYL 138
+ ++G G FG V G KL G + VA+K L ++G+ + R+FL E ++ +P +
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
++L G +++ E+M NGSL+ L N + + G A G++YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYL-- 125
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMG---TYGYCAPE 255
A ++R A N+L++ + K+SDFGL++ T +G + APE
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 256 YALTGQLTAKSDVYSFGVVFLEIIT 280
+ T+ SDV+S+G+V E+++
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 87 LGEGGFGRVYRG-----KLEGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLVN 140
LGEG FG+V + K VAVK L N R+ L E +L +++P+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHL---------------------LDLPPNRKALDW 179
L G C +L+ EY GSL L LD P+ +AL
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD-HPDERALTM 149
Query: 180 NTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS 239
+ A ++G++YL E + +++RD A N+L+ + K+SDFGL++ D
Sbjct: 150 GDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
++ + A E T +SDV+SFGV+ EI+T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI------RKIGSFDETCTRFYTAE-IVSAL 145
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE + SD+++ G + +++ G
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A + L
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAEIVS-AL 120
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A + L
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAEIVS-AL 122
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A + L
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAEIVS-AL 121
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 122 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A + L
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAEIVS-AL 123
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 143
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 87 LGEGGFGRVYRG-----KLEGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLVN 140
LGEG FG+V + K VAVK L N R+ L E +L +++P+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHL---------------------LDLPPNRKALDW 179
L G C +L+ EY GSL L LD P+ +AL
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD-HPDERALTM 149
Query: 180 NTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS 239
+ A ++G++YL A+ +++RD A N+L+ + K+SDFGL++ D
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
++ + A E T +SDV+SFGV+ EI+T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V T+FN +LG+G FG+V +GT + A+K L ++ + + +VE +L++
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 133 LSNPYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNR--KALDWNTRMKIAHGA 189
L P + + C R+ V EY+ G L H+ + + +A+ + + I
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI---- 131
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR-VMGT 248
GL +LH+ +IYRD K NV+LD + + K++DFG+ K V+TR GT
Sbjct: 132 --GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGT 183
Query: 249 YGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTE 292
Y APE D +++GV+ E++ G+ D E
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 26/207 (12%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ G + + VAVK L + G + FL E ++ L + LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 147 DGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
+ ++ E+M GSL D L + LP K +D++ ++ A G+ Y+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP---KLIDFSAQI------AEGMAYIERK 128
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYA 257
I+RD +A+NVL+ + K++DFGLA++ + + + R + + APE
Sbjct: 129 N---YIHRDLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAI 182
Query: 258 LTGQLTAKSDVYSFGVVFLEIITGRRV 284
G T KS+V+SFG++ EI+T ++
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKI 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 145
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 127
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 128 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 145
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 146
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 145
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 143
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLD-------RNGFQGNREFLVEVLMLSMLSNPY 137
+ LGEG F VY+ + + TNQ VA+K++ ++G NR L E+ +L LS+P
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPN 73
Query: 138 LVNLVGYCVDGDQRILVYEYMPNG---SLEDHLLDLPPNR-KALDWNTRMKIAHGAARGL 193
++ L+ LV+++M ++D+ L L P+ KA T +GL
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT--------LQGL 125
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH+ +++RD K +N+LLD++ KL+DFGLAK + ++++ V T Y A
Sbjct: 126 EYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRA 180
Query: 254 PEYALTGQLTAKS-DVYSFGVVFLEII 279
PE ++ D+++ G + E++
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 146
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 143
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 142
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G + L L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELAN 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 229
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 230 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 142
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 145
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 33/227 (14%)
Query: 90 GGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
G FG V++ +L N VAVK D+ +Q RE + + + L+ +
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEK 79
Query: 147 DGD----QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA-- 200
G + L+ + GSL D+L + WN +A +RGL YLHE
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 201 ------QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
+P + +RDFK+ NVLL D L+DFGLA G + +GT Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 255 EY---ALTGQLTA--KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
E A+ Q A + D+Y+ G+V E+++ + D P +E L
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG--PVDEYML 239
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + +ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 145
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYL 138
+N +LG+G FG V + K T Q+ AVK +++ + L EV +L L +P +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ L D +V E G L D ++ RK + +I G+ Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+++RD K N+LL ++D + K+ DFGL+ K + R+ GT Y APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIAPE 193
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITG 281
L G K DV+S GV+ +++G
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ + VAVK + + G FL E ++ L + LV L V
Sbjct: 190 LGAGQFGEVWMATY-NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 246
Query: 147 DGDQRILVYEYMPNGSLEDHLLD----LPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
+ ++ E+M GSL D L P K +D++ ++ A G+ ++ Q
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIE---QR 297
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
I+RD +A+N+L+ K++DFGLA++G + APE G
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARVG-----------AKFPIKWTAPEAINFGSF 346
Query: 263 TAKSDVYSFGVVFLEIITGRRV 284
T KSDV+SFG++ +EI+T R+
Sbjct: 347 TIKSDVWSFGILLMEIVTYGRI 368
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYL 138
+N +LG+G FG V + K T Q+ AVK +++ + L EV +L L +P +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ L D +V E G L D ++ RK + +I G+ Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+++RD K N+LL ++D + K+ DFGL+ K + R+ GT Y APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIAPE 193
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITG 281
L G K DV+S GV+ +++G
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F V + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 148
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 149 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 27/284 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQ-LDRNGFQGNREF-LVEVLMLSMLSNPYLVNLVG 143
L+GEG +G V + + + T + VA+K+ L+ + + ++ + E+ +L L + LVNL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
C + LV+E++ + L+D L+L PN LD+ K G+ + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDD--LELFPN--GLDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
+I+RD K N+L+ Q KL DFG A+ L G+ V + T Y APE +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPELLVGDVK 201
Query: 263 TAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQ--------NLVTWATPLFKDRRKFTMM 313
K+ DV++ G + E+ G + ++ NL+ LF F +
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 314 ADPLLEGNYPIKGLYQALA-----VAAMCLQEEAGTRPMMSDVV 352
P ++ P++ Y L+ +A CL + RP ++++
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQ-----DVAVKQLDRNGFQGNREFLV-EVLMLSML 133
N +LG G FG+V G ++ VAVK L RE L+ E+ M++ L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 134 -SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHL-------------------LDLPPN 173
S+ +VNL+G C L++EY G L ++L L+ +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
L + + A+ A+G+E+L + ++RD A NVL+ K+ DFGLA+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 234 PTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ V + APE G T KSDV+S+G++ EI +
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 87 LGEGGFGRVYRG-----KLEGTNQDVAVKQLDRNGFQGN-REFLVEVLMLSMLSNPYLVN 140
LGEG FG+V + K VAVK L N R+ L E +L +++P+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHL---------------------LDLPPNRKALDW 179
L G C +L+ EY GSL L LD P+ +AL
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD-HPDERALTM 149
Query: 180 NTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS 239
+ A ++G++YL A+ +++RD A N+L+ + K+SDFGL++ D
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
++ + A E T +SDV+SFGV+ EI+T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 123
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 124 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAG 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 77 ATTNFNPDNL------LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLML 130
T + NP++ LG+G FG+VY+ + + T+ A K +D + +++VE+ +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
+ +P +V L+ + ++ E+ G+++ +L+L + L + +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTL 145
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
L YLH++ +I+RD KA N+L D + KL+DFG++ + S +GT
Sbjct: 146 DALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPY 200
Query: 251 YCAPEYALTGQ-----LTAKSDVYSFGVVFLEI 278
+ APE + K+DV+S G+ +E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAVK +D+ ++ EV ++ +L++P
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR------ 191
+V L LV EY G + D+L+ + RMK A+
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 125
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
++Y H Q +++RD KA N+LLD D N K++DFG + G+K G+ Y
Sbjct: 126 AVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPY 179
Query: 252 CAPEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
APE + + DV+S GV+ +++G S P + QNL
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 219
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 77 ATTNFNPDNL------LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLML 130
T + NP++ LG+G FG+VY+ + + T+ A K +D + +++VE+ +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
+ +P +V L+ + ++ E+ G+++ +L+L + L + +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTL 145
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
L YLH++ +I+RD KA N+L D + KL+DFG++ + S +GT
Sbjct: 146 DALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPY 200
Query: 251 YCAPEYALTGQ-----LTAKSDVYSFGVVFLEI 278
+ APE + K+DV+S G+ +E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITGRRVID 286
A+ DV+S G+V ++ G D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITGRRVID 286
A+ DV+S G+V ++ G D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG +G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 125
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ + VAVK + + G FL E ++ L + LV L V
Sbjct: 23 LGAGQFGEVWMATY-NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 79
Query: 147 DGDQRILVYEYMPNGSLEDHLLD----LPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
+ ++ E+M GSL D L P K +D++ ++ A G+ ++ Q
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIE---QR 130
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTG 260
I+RD +A+N+L+ K++DFGLA++ + + + R + + APE G
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 261 QLTAKSDVYSFGVVFLEIITGRRV 284
T KSDV+SFG++ +EI+T R+
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRI 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 120
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ ++ +S GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDY 173
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 225
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 226 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 227
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 228 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 77 ATTNFNPDNL------LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLML 130
T + NP++ LG+G FG+VY+ + + T+ A K +D + +++VE+ +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 131 SMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
+ +P +V L+ + ++ E+ G+++ +L+L + L + +
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTL 145
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR--VMGT 248
L YLH++ +I+RD KA N+L D + KL+DFG++ + + R +GT
Sbjct: 146 DALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGT 198
Query: 249 YGYCAPEYALTGQ-----LTAKSDVYSFGVVFLEI 278
+ APE + K+DV+S G+ +E+
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 80
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 136
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 137 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 189
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 241
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 242 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 120
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 173
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 225
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 226 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 229
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 230 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 177
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 229
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 230 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 145
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 198
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 250
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 251 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 17/220 (7%)
Query: 68 IFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FL 124
+F + + + +LG+G FG V K + T Q+ AVK + + + + L
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 125 VEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMK 184
EV +L L +P ++ L + D LV E G L D ++ +RK +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAAR 136
Query: 185 IAHGAARGLEYLHESAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDKSHV 241
I G+ Y+H++ +++RD K N+LL+ +D N ++ DFGL+ K
Sbjct: 137 IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+GT Y APE L G K DV+S GV+ +++G
Sbjct: 194 K---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV--EVLMLSMLSNP 136
+F +LGEG F + T+++ A+K L+ R+ + N+ V E ++S L +P
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN---TRMKIAHGAARGL 193
+ V L D ++ Y NG L ++ RK ++ TR A L
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTAE-IVSAL 143
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
EYLH +I+RD K N+LL++D + +++DFG AK+ K + +GT Y +
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITG 281
PE SD+++ G + +++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYLVNLVG 143
+LG+G FG V + K T Q+ AVK +++ + L EV +L L +P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V E G L D ++ RK + +I G+ Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 204 VIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
+++RD K N+LL ++D + K+ DFGL+ K + R+ GT Y APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIAPE-VLRG 197
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
K DV+S GV+ +++G
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
PE K D++S GV+ E + G+
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 17/223 (7%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-- 122
T +F + + + +LG+G FG V K + T Q+ AVK + + + +
Sbjct: 12 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 123 -FLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
L EV +L L +P ++ L + D LV E G L D ++ +RK
Sbjct: 72 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVD 127
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDK 238
+I G+ Y+H++ +++RD K N+LL+ +D N ++ DFGL+ K
Sbjct: 128 AARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+GT Y APE L G K DV+S GV+ +++G
Sbjct: 185 MKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G + L L D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELAN 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDY 177
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 229
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 230 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 62
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 118
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 171
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 223
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 224 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 254
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 118
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G D + + T GT
Sbjct: 119 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPE 173
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 227
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 228 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 67
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 123
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 176
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 228
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 229 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 259
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G D + + T GT
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPE 170
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
LG G FG V+ + VAVK + + G FL E ++ L + LV L V
Sbjct: 196 LGAGQFGEVWMATY-NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 147 DGDQRILVYEYMPNGSLEDHLLD----LPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
+ ++ E+M GSL D L P K +D++ ++ A G+ ++ Q
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFIE---QR 303
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY--GYCAPEYALTG 260
I+RD +A+N+L+ K++DFGLA++ + + + R + + APE G
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 261 QLTAKSDVYSFGVVFLEIITGRRV 284
T KSDV+SFG++ +EI+T R+
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRI 384
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 79 TNFNPDNLLGEGGFGRVYR-GKLEGTN--QDVAVKQL--------DRNGFQGNREFLVEV 127
+ F +LG+G FG+V+ K+ G++ Q A+K L DR + R+ LVEV
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 128 LMLSMLSNPYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA 186
++P++V L Y + ++ L+ +++ G L L + + + +A
Sbjct: 85 ------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 134
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A L++LH +IYRD K N+LLD++ + KL+DFGL+K +K S
Sbjct: 135 E-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 188
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
GT Y APE T +D +SFGV+ E++TG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G D + + T GT
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPE 170
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 17/223 (7%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-- 122
T +F + + + +LG+G FG V K + T Q+ AVK + + + +
Sbjct: 35 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 94
Query: 123 -FLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
L EV +L L +P ++ L + D LV E G L D ++ +RK
Sbjct: 95 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVD 150
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDK 238
+I G+ Y+H++ +++RD K N+LL+ +D N ++ DFGL+ K
Sbjct: 151 AARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 207
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+GT Y APE L G K DV+S GV+ +++G
Sbjct: 208 MKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAVK +D+ + ++ EV ++ +L++P
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR------ 191
+V L LV EY G + D+L+ + RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
++Y H Q +++RD KA N+LLD D N K++DFG + G+K G+ Y
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 252 CAPEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
APE + + DV+S GV+ +++G S P + QNL
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 79 TNFNPDNLLGEGGFGRVYR-GKLEGTN--QDVAVKQL--------DRNGFQGNREFLVEV 127
+ F +LG+G FG+V+ K+ G++ Q A+K L DR + R+ LVEV
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 128 LMLSMLSNPYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA 186
++P++V L Y + ++ L+ +++ G L L + + + +A
Sbjct: 84 ------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 133
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A L++LH +IYRD K N+LLD++ + KL+DFGL+K +K S
Sbjct: 134 E-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 187
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
GT Y APE T +D +SFGV+ E++TG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 79 TNFNPDNLLGEGGFGRVYR-GKLEGTN--QDVAVKQL--------DRNGFQGNREFLVEV 127
+ F +LG+G FG+V+ K+ G++ Q A+K L DR + R+ LVEV
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 128 LMLSMLSNPYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA 186
++P++V L Y + ++ L+ +++ G L L + + + +A
Sbjct: 84 ------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 133
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A L++LH +IYRD K N+LLD++ + KL+DFGL+K +K S
Sbjct: 134 E-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 187
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
GT Y APE T +D +SFGV+ E++TG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAVK +D+ + ++ EV ++ +L++P
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR------ 191
+V L LV EY G + D+L+ + RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
++Y H Q +++RD KA N+LLD D N K++DFG + G+K G+ Y
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 252 CAPEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
APE + + DV+S GV+ +++G S P + QNL
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-- 122
T +F + + + +LG+G FG V K + T Q+ AVK + + + +
Sbjct: 36 TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 95
Query: 123 -FLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
L EV +L L +P ++ L + D LV E G L D ++ +RK
Sbjct: 96 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVD 151
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDK 238
+I G+ Y+H++ +++RD K N+LL+ +D N ++ DFGL+ +
Sbjct: 152 AARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEA 205
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
S +GT Y APE L G K DV+S GV+ +++G
Sbjct: 206 SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV------EVLMLSMLSNPYL 138
+ LG G FG+V G+ + T VAVK L+R Q R V E+ L + +P++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNR---QKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ L +V EY+ G L D++ + + + R ++ ++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEAR-RLFQQILSAVDYCHR 129
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
V++RD K NVLLD N K++DFGL+ + G+ S G+ Y APE +
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VI 182
Query: 259 TGQLTA--KSDVYSFGVVFLEIITGRRVIDNSR-PT 291
+G+L A + D++S GV+ ++ G D+ PT
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 77 ATTNFNPDN---LLGE-GGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSM 132
T + NP++ ++GE G FG+VY+ + + T+ A K +D + +++VE+ +L+
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARG 192
+P +V L+ + ++ E+ G+++ +L+L + L + +
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDA 120
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR--VMGTYG 250
L YLH++ +I+RD KA N+L D + KL+DFG++ ++ + R +GT
Sbjct: 121 LNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPY 174
Query: 251 YCAPEYALTGQ-----LTAKSDVYSFGVVFLEI 278
+ APE + K+DV+S G+ +E+
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG G V T + VAVK +D + E+ + ML++ +V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 146 VDGDQRILVYEYMPNGSLEDHL---LDLP-PNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+G+ + L EY G L D + + +P P+ + + H G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYLHGIG- 124
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
+ +RD K N+LLD+ N K+SDFGLA + ++ + ++ GT Y APE +
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 262 LTAKS-DVYSFGVVFLEIITG 281
A+ DV+S G+V ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAVK +D+ + ++ EV ++ +L++P
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR------ 191
+V L LV EY G + D+L+ + RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
++Y H Q +++RD KA N+LLD D N K++DFG + G+K G Y
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPY 178
Query: 252 CAPEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
APE + + DV+S GV+ +++G S P + QNL
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 121
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K+++FG + P+ + T + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 174
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 226
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 227 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 257
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAVK +D+ + ++ EV ++ +L++P
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR----GL 193
+V L LV EY G + D+L+ A W + K A R +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV-------AHGW-MKEKEARAKFRQIVSAV 119
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
+Y H Q +++RD KA N+LLD D N K++DFG + G+K G+ Y A
Sbjct: 120 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 173
Query: 254 PEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
PE + + DV+S GV+ +++G S P + QNL
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 121
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 174
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 226
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 227 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 257
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSN 135
T+FN +LG+G FG+V + +GT++ AVK L ++ + + +VE +L++
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 136 PYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA----- 189
P + + C R+ V EY+ G L H+ + R K H
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV----------GRFKEPHAVFYAAE 450
Query: 190 -ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-G 247
A GL +L +IYRD K NV+LD + + K++DFG+ K V+T+ G
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCG 504
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
T Y APE D ++FGV+ E++ G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 120
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDY 173
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 225
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 226 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ ++ + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 175
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 227
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 228 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
LG GG VY + N VA+K + R + + F EV S LS+ +V+++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
+ D LV EY+ +L +++ P L +T + + G+++ H+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
+++RD K N+L+D + K+ DFG+AK L T + V+GT Y +PE A G+
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTVQYFSPEQA-KGEA 188
Query: 263 TAK-SDVYSFGVVFLEIITGR 282
T + +D+YS G+V E++ G
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V F LLG+G FG+V K + T + A+K L + E L E +L
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARF-YGAEIV 119
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-GTY 249
L+YLH ++ V+YRD K N++LD+D + K++DFGL K G K + + GT
Sbjct: 120 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 174
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + +A+K QL++ G + + EV + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 60
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 116
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + T + GT Y
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 169
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 221
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 222 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 252
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLSMLS 134
+F+ LG+G FG VY + + +A+K QL++ G + + EV + S L
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLR 70
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P ++ L GY D + L+ EY P G++ L L D A L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SRFDEQRTATYITELANALS 126
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
Y H VI+RD K N+LL + K++DFG + P+ + T + GT Y P
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPP 179
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E K D++S GV+ E + G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAV+ +D+ + ++ EV ++ +L++P
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR------ 191
+V L LV EY G + D+L+ + RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
++Y H Q +++RD KA N+LLD D N K++DFG + G+K G+ Y
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 252 CAPEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
APE + + DV+S GV+ +++G S P + QNL
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + Y T + A K + ++ + E+ + L NP++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKA+ +G++YLH +
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-- 162
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L+ D + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEVLCKKG 218
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + D++S G + ++ G+ + S
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V F LLG+G FG+V K + T + A+K L + E L E +L
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARF-YGAEIV 118
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-GTY 249
L+YLH ++ V+YRD K N++LD+D + K++DFGL K G K + + GT
Sbjct: 119 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 173
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VAV+ +D+ + ++ EV ++ +L++P
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR------ 191
+V L LV EY G + D+L+ + RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----------HGRMKEKEARAKFRQIVS 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
++Y H Q +++RD KA N+LLD D N K++DFG + G+K G+ Y
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPY 178
Query: 252 CAPEYALTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
APE + + DV+S GV+ +++G S P + QNL
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V F LLG+G FG+V K + T + A+K L + E L E +L
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARF-YGAEIV 120
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-GTY 249
L+YLH ++ V+YRD K N++LD+D + K++DFGL K G K + + GT
Sbjct: 121 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTP 175
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ ++ + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 145
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 198
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 250
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 251 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 281
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ ++ + GT Y
Sbjct: 120 ALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
PE K D++S GV+ E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K+++FG + P+ + T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 175
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 227
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 228 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 175
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 227
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 228 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV------EVLMLSMLSNPYL 138
+ LG G FG+V G+ + T VAVK L+R Q R V E+ L + +P++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNR---QKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ L +V EY+ G L D++ + + + R ++ ++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEAR-RLFQQILSAVDYCHR 129
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
V++RD K NVLLD N K++DFGL+ + G+ S G+ Y APE +
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VI 182
Query: 259 TGQLTA--KSDVYSFGVVFLEIITGRRVIDNSR-PT 291
+G+L A + D++S GV+ ++ G D+ PT
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT 218
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 119
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 224
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 225 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 255
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G + + GT
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPE 170
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + Y T + A K + ++ + E+ + L NP++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKA+ +G++YLH +
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-- 162
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L+ D + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKKG 218
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + D++S G + ++ G+ + S
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSN 135
T+FN +LG+G FG+V + +GT++ AVK L ++ + + +VE +L++
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 136 PYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA----- 189
P + + C R+ V EY+ G L H+ + R K H
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV----------GRFKEPHAVFYAAE 129
Query: 190 -ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-G 247
A GL +L +IYRD K NV+LD + + K++DFG+ K V+T+ G
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCG 183
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
T Y APE D ++FGV+ E++ G+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G + + GT
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPE 170
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + Y T + A K + ++ + E+ + L NP++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKA+ +G++YLH +
Sbjct: 109 GFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-- 162
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L+ D + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKKG 218
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + D++S G + ++ G+ + S
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VA+K +D+ ++ EV ++ +L++P
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
+V L L+ EY G + D+L+ + + + R K ++Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLV---AHGRMKEKEARSKFRQ-IVSAVQYCH 128
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYA 257
Q +++RD KA N+LLD D N K++DFG + G K G+ Y APE
Sbjct: 129 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELF 182
Query: 258 LTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
+ + DV+S GV+ +++G S P + QNL
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G + + GT
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPE 170
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLS 131
A +F LG+G FG VY + + + +A+K QL++ G + + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P ++ L GY D + L+ EY P G++ L L D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELAN 122
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L Y H VI+RD K N+LL K++DFG + P+ + + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 175
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFT 311
PE K D++S GV+ E + G+ + + E ++ R +FT
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--------RVEFT 227
Query: 312 MMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
D + EG A + + L+ RPM+ +V+
Sbjct: 228 -FPDFVTEG---------ARDLISRLLKHNPSQRPMLREVL 258
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
V +F+ LLG+G FG+V + + T + A+K L + E + E +L
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA--A 190
+P+L L D+ V EY G L HL +R+ + R + +GA
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARF-YGAEIV 120
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
LEYLH V+YRD K N++LD+D + K++DFGL K G + + GT
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPE 175
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
Y APE D + GVV E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+GEG G V + T + VAVK++D Q RE L EV+++ + +V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ GD+ +V E++ G+L D + N + + + R L YLH VI
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQG---VI 163
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD K+ ++LL D KLSDFG + ++GT + APE +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 266 SDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATP 302
D++S G++ +E+I G N P + + + P
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLP 258
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + Y T + A K + ++ + E+ + L NP++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKA+ +G++YLH +
Sbjct: 93 GFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-- 146
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L+ D + K+ DFGLA K+ G++ + GT Y APE
Sbjct: 147 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKKG 202
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + D++S G + ++ G+ + S
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 12 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+P G + HL +
Sbjct: 72 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-- 129
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 130 -RFXEPHARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-- 182
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 183 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPY 137
N+ +G+G F +V + T ++VA+K +D+ ++ EV ++ +L++P
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
+V L L+ EY G + D+L+ + + + R K ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLV---AHGRMKEKEARSKFRQ-IVSAVQYCH 131
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYA 257
Q +++RD KA N+LLD D N K++DFG + G K G Y APE
Sbjct: 132 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELF 185
Query: 258 LTGQLTA-KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
+ + DV+S GV+ +++G S P + QNL
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 219
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 101/227 (44%), Gaps = 34/227 (14%)
Query: 90 GGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLSNPYLVNLVG--- 143
G FG V++ +L N+ VAVK D+ +Q EV L + + ++ +G
Sbjct: 35 GRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNE----YEVYSLPGMKHENILQFIGAEK 88
Query: 144 --YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA- 200
VD D L+ + GSL D L + WN IA ARGL YLHE
Sbjct: 89 RGTSVDVD-LWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 201 ------QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
+P + +RD K+ NVLL + ++DFGLA G + + +GT Y AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 255 EY---ALTGQLTA--KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
E A+ Q A + D+Y+ G+V E+ + R P +E L
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYML 247
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ +E L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ K++DFGLAK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+P G + HL +
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 140 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 191 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 40 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 99
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+P G + HL +
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-- 157
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 158 -RFSEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 210
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 211 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+P G + HL +
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 140 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 191 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 65 TAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-- 122
T F + + + +LG+G FG V K + T Q+ AVK + + + +
Sbjct: 12 TPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 123 -FLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
L EV +L L +P + L + D LV E G L D ++ +RK
Sbjct: 72 SLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVD 127
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLD---QDFNPKLSDFGLAKLGPTGDK 238
+I G+ Y H++ +++RD K N+LL+ +D N ++ DFGL+ K
Sbjct: 128 AARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+GT Y APE L G K DV+S GV+ +++G
Sbjct: 185 XKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
+G G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EYMP G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ K++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+P G + HL +
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG-- 137
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 138 -RFSEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 191 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPYLV 139
LG G FG+V G ++ VAVK L +E L+ E+ ++S L + +V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
NL+G C G +++ EY G L + L + L+ + IA+ A + LH S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRR---KSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 200 AQPP----------VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+Q I+RD A NVLL K+ DFGLA+ V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G++ EI +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY P G + HL +
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG-- 137
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+++DQ K++DFG AK
Sbjct: 138 -RFSEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK-- 190
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 191 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSN-----PYLVN 140
L+G G +G+VY+G+ T Q A+K +D G + E E+ ML S+ Y
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 141 LVGYCVDG--DQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ G DQ LV E+ GS+ D + + N +W I RGL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLH- 146
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYA 257
Q VI+RD K NVLL ++ KL DFG+ A+L T + + +GT + APE
Sbjct: 147 --QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGTPYWMAPEVI 201
Query: 258 LTGQ-----LTAKSDVYSFGVVFLEIITG 281
+ KSD++S G+ +E+ G
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
+G G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EYMP G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ K++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 12 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+P G + HL +
Sbjct: 72 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRF 131
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 132 SEP---HARFYAAQ-IVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-- 182
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 183 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
+ NF +LG+G FG+V +++ T AVK L ++ + + + E +LS+
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 133 LSN-PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
N P+L L D+ V E++ G L H+ +R+ + R A
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI---QKSRRFDEARARFYAAE-IIS 135
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
L +LH+ +IYRD K NVLLD + + KL+DFG+ K G + + GT Y
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDY 190
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
APE D ++ GV+ E++ G
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--REFLVEVLMLSMLSNPYLVNLVGY 144
+G+G F +V + T ++VAVK +D+ + ++ EV + +L++P +V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
LV EY G + D+L+ + + + R K ++Y H Q +
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLV---AHGRXKEKEARAKFRQ-IVSAVQYCH---QKFI 134
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
++RD KA N+LLD D N K++DFG + G+K G Y APE +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDG 191
Query: 265 -KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
+ DV+S GV+ +++G S P + QNL
Sbjct: 192 PEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLSMLS 134
+F+ LG+G FG VY + + +A+K QL++ G + + EV + S L
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLR 70
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P ++ L GY D + L+ EY P G++ L L D A L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SRFDEQRTATYITELANALS 126
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
Y H VI+RD K N+LL + K++DFG + P+ + + GT Y P
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPP 179
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E K D++S GV+ E + G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K + T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLS-NPYLVNLVGY 144
+L EGGF VY + G+ ++ A+K+L N + NR + EV + LS +P N+V +
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP---NIVQF 91
Query: 145 CV----------DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
C G L+ + G L + L + +R L +T +KI + R ++
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM-ESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA 230
++H +PP+I+RD K N+LL KL DFG A
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K + T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K + T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ +E L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ +++DFGLAK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLS 131
+A + + +LGEG FG VY G +G +VAVK ++ N+E F+ E +++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P++V L+G ++ + ++ E P G L +L N+ +L T + + +
Sbjct: 65 NLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICK 120
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ YL ES ++RD N+L+ KL DFGL++ D S + +
Sbjct: 121 AMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KW 176
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+PE + T SDV+ F V EI++
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G FG V+RGK G ++VAVK +R+ F RE E+ ML + N++
Sbjct: 11 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF---RE--AEIYQTVMLRHE---NIL 60
Query: 143 GYCVDGD-------QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
G+ + Q LV +Y +GSL D+L NR + +K+A A GL +
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAH 115
Query: 196 LH-----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVS-TRVMGT 248
LH +P + +RD K+ N+L+ ++ ++D GLA + D ++ +GT
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 249 YGYCAPEYALTGQLTAK-------SDVYSFGVVFLEI 278
Y APE L + K +D+Y+ G+VF EI
Sbjct: 176 KRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLS 131
+A + + +LGEG FG VY G +G +VAVK ++ N+E F+ E +++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P++V L+G ++ + ++ E P G L +L N+ +L T + + +
Sbjct: 81 NLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICK 136
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ YL ES ++RD N+L+ KL DFGL++ D S + +
Sbjct: 137 AMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KW 192
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+PE + T SDV+ F V EI++
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G FG V+RGK G ++VAVK +R+ F RE E+ ML + N++
Sbjct: 17 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF---RE--AEIYQTVMLRHE---NIL 66
Query: 143 GYCVDGD-------QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
G+ + Q LV +Y +GSL D+L NR + +K+A A GL +
Sbjct: 67 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAH 121
Query: 196 LH-----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVS-TRVMGT 248
LH +P + +RD K+ N+L+ ++ ++D GLA + D ++ +GT
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 249 YGYCAPEYALTGQLTAK-------SDVYSFGVVFLEI 278
Y APE L + K +D+Y+ G+VF EI
Sbjct: 182 KRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G FG V+RGK G ++VAVK +R+ F RE E+ ML + N++
Sbjct: 12 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF---RE--AEIYQTVMLRHE---NIL 61
Query: 143 GYCVDGD-------QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
G+ + Q LV +Y +GSL D+L NR + +K+A A GL +
Sbjct: 62 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAH 116
Query: 196 LH-----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVS-TRVMGT 248
LH +P + +RD K+ N+L+ ++ ++D GLA + D ++ +GT
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 249 YGYCAPEYALTGQLTAK-------SDVYSFGVVFLEI 278
Y APE L + K +D+Y+ G+VF EI
Sbjct: 177 KRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPYLV 139
LG G FG+V G ++ VAVK L +E L+ E+ ++S L + +V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAARG 192
NL+G C G +++ EY G L + L LD R L+ + + A+G
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVAQG 164
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 252
+ +L A I+RD A NVLL K+ DFGLA+ V +
Sbjct: 165 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIIT 280
APE T +SDV+S+G++ EI +
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLS 131
+A + + +LGEG FG VY G +G +VAVK ++ N+E F+ E +++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
L +P++V L+G ++ + ++ E P G L +L N+ +L T + + +
Sbjct: 69 NLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICK 124
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ YL ES ++RD N+L+ KL DFGL++ D S + +
Sbjct: 125 AMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KW 180
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+PE + T SDV+ F V EI++
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G FG V+RGK G ++VAVK +R+ F RE E+ ML + N++
Sbjct: 14 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF---RE--AEIYQTVMLRHE---NIL 63
Query: 143 GYCVDGD-------QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
G+ + Q LV +Y +GSL D+L NR + +K+A A GL +
Sbjct: 64 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAH 118
Query: 196 LH-----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVS-TRVMGT 248
LH +P + +RD K+ N+L+ ++ ++D GLA + D ++ +GT
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 249 YGYCAPEYALTGQLTAK-------SDVYSFGVVFLEI 278
Y APE L + K +D+Y+ G+VF EI
Sbjct: 179 KRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPYLV 139
LG G FG+V G ++ VAVK L +E L+ E+ ++S L + +V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAARG 192
NL+G C G +++ EY G L + L LD R L+ + + A+G
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVAQG 172
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 252
+ +L A I+RD A NVLL K+ DFGLA+ V +
Sbjct: 173 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIIT 280
APE T +SDV+S+G++ EI +
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 36/270 (13%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNG-FQGNREFLVEV-LMLSMLSNPYLVNLVGY 144
+G G G+V++ + T +AVKQ+ R+G + N+ L+++ ++L PY+V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 145 CVDGDQRILVYEYMPNGSLEDHL---LDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
+ + E M G+ + L + P + L +M +A + L YL E
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERIL---GKMTVA--IVKALYYLKEKHG 145
Query: 202 PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K SN+LLD+ KL DFG++ G D R G Y APE
Sbjct: 146 --VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVD-DKAKDRSAGCAAYMAPERIDPPD 200
Query: 262 LTA-----KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADP 316
T ++DV+S G+ +E+ TG+ N + F+ K P
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------------FEVLTKVLQEEPP 248
Query: 317 LLEGNYPIKGLYQALAVAAMCLQEEAGTRP 346
LL G+ G +Q+ CL ++ RP
Sbjct: 249 LLPGHMGFSGDFQSF--VKDCLTKDHRKRP 276
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + + R A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSL---D 162
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G FG V+RGK G ++VAVK +R+ F RE E+ ML + N++
Sbjct: 37 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF---RE--AEIYQTVMLRHE---NIL 86
Query: 143 GYCVDGD-------QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
G+ + Q LV +Y +GSL D+L NR + +K+A A GL +
Sbjct: 87 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAH 141
Query: 196 LH-----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVS-TRVMGT 248
LH +P + +RD K+ N+L+ ++ ++D GLA + D ++ +GT
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 249 YGYCAPEYALTGQLTAK-------SDVYSFGVVFLEI 278
Y APE L + K +D+Y+ G+VF EI
Sbjct: 202 KRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ K++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFL-VEVLMLSMLSNPYLVNLVGYC 145
LG G FG V+ + + + +K ++++ Q E + E+ +L L +P ++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
D +V E G L + ++ KAL ++ L Y H V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 206 YRDFKASNVLLDQDFNP----KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++D K N+L QD +P K+ DFGLA+L + + S T GT Y APE
Sbjct: 147 HKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPE-VFKRD 201
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATP 302
+T K D++S GVV ++TG + E Q T+ P
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 130
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D +V + +CAPE T
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
+G G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ K++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 130
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D +V + +CAPE T
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----EVLMLSMLSNPYLVNL 141
+LG GG V+ + ++DVAVK L R + F + E + L++P +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 142 V----GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
G +V EY+ +L D + P + +++ A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEY 256
++ +I+RD K +N+L+ K+ DFG+A+ + +G+ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
A + A+SDVYS G V E++TG
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 134
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D +V + +CAPE T
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 134
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D +V + +CAPE T
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 73 ELCVATTNFNPDNLLGEGGFGRVYRGKL---EGTNQDVAVKQLDRNGFQGN--REFLVEV 127
++ + F +LG+G FG V +L +G+ VAVK L + + EFL E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 128 LMLSMLSNPYLVNLVGYCVDGDQR------ILVYEYMPNGSLEDHLLD--LPPNRKALDW 179
+ +P++ LVG + + +++ +M +G L LL + N L
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 180 NTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKS 239
T ++ A G+EYL I+RD A N +L +D ++DFGL++ +GD
Sbjct: 137 QTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ A E T SDV++FGV EI+T
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G FG V+RGK G ++VAVK +R+ F RE E+ ML + N++
Sbjct: 50 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF---RE--AEIYQTVMLRHE---NIL 99
Query: 143 GYCVDGD-------QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
G+ + Q LV +Y +GSL D+L NR + +K+A A GL +
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAH 154
Query: 196 LH-----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVS-TRVMGT 248
LH +P + +RD K+ N+L+ ++ ++D GLA + D ++ +GT
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 249 YGYCAPEYALTGQLTAK-------SDVYSFGVVFLEI 278
Y APE L + K +D+Y+ G+VF EI
Sbjct: 215 KRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV-EVLMLSML 133
+AT+ + P +G G +G VY+ + + VA+K + NG +G V EV +L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 134 S---NPYLVNLVGYCVDG--DQRI---LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI 185
+P +V L+ C D+ I LV+E++ + L +L PP L T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP--PGLPAETIKDL 117
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
RGL++LH + +++RD K N+L+ KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPV 171
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
+ T Y APE L D++S G +F E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 162
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 140
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D +V + +CAPE T
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + + R A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 162
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSK 214
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K S + F LG G FGRV K + T A+K LD+
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E + ++ P+LV L D +V EY P G + HL +
Sbjct: 80 VVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG-- 137
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ K++DFG AK
Sbjct: 138 -RFSEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK-- 190
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 191 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPYLV 139
LG G FG+V G ++ VAVK L +E L+ E+ ++S L + +V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHES 199
NL+G C G +++ EY G L + L + L+ + IA+ + LH S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRR---KSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 200 AQPP----------VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+Q I+RD A NVLL K+ DFGLA+ V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G++ EI +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
+ +F+ ++G G + +V +L+ T++ A+K + + + + E +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 133 LSN-PYLVNLVGYCVDGDQRIL-VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
SN P+LV L C + R+ V EY+ G L H+ RK + + R A +
Sbjct: 77 ASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAE-IS 131
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
L YLHE +IYRD K NVLLD + + KL+D+G+ K G GD ++ GT
Sbjct: 132 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTP 185
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
Y APE D ++ GV+ E++ GR D
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 123/273 (45%), Gaps = 56/273 (20%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G+G +G V+RG G + VAVK R+ RE E+ +L + N++G+
Sbjct: 16 VGKGRYGEVWRGLWHG--ESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHD---NILGFI 68
Query: 146 VD-------GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH- 197
Q L+ Y +GSL D L R+ L+ + +++A AA GL +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHV 123
Query: 198 ----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTG-DKSHVSTRV-MGTYGY 251
+P + +RDFK+ NVL+ + ++D GLA + G D + +GT Y
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 252 CAPEYALTGQLTAK-------SDVYSFGVVFLEIITGRR-----VIDNSRPTEEQNLVTW 299
APE L Q+ +D+++FG+V EI RR ++++ RP V
Sbjct: 184 MAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYD--VVP 238
Query: 300 ATPLFKDRRKFT------------MMADPLLEG 320
P F+D +K + ADP+L G
Sbjct: 239 NDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSG 271
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ K++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ---GNREFLVEVLMLSM 132
V F +LG+GGFG V ++ T + A K+L++ + G L E +L
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLP----PNRKALDWNTRMKIAHG 188
+++ ++V+L D LV M G L+ H+ + P +A+ + +
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI----- 295
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GLE LH ++YRD K N+LLD + ++SD GLA P G + RV GT
Sbjct: 296 -CCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GT 348
Query: 249 YGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
GY APE + T D ++ G + E+I G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+P G + HL + + + R A EYLH
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSLD--- 147
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSK 199
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 200 GYNKAVDWWALGVLIYEMAAG 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV-EVLMLSML 133
+AT+ + P +G G +G VY+ + + VA+K + NG +G V EV +L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 134 S---NPYLVNLVGYCVDG--DQRI---LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI 185
+P +V L+ C D+ I LV+E++ + L +L PP L T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP--PGLPAETIKDL 117
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
RGL++LH + +++RD K N+L+ KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPV 171
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
+ T Y APE L D++S G +F E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 130
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D V + +CAPE T
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
+ +F+ ++G G + +V +L+ T++ A+K + + + + E +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 133 LSN-PYLVNLVGYCVDGDQRIL-VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
SN P+LV L C + R+ V EY+ G L H+ RK + + R A +
Sbjct: 62 ASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAE-IS 116
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
L YLHE +IYRD K NVLLD + + KL+D+G+ K G GD ++ GT
Sbjct: 117 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTP 170
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
Y APE D ++ GV+ E++ GR D
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----EVLMLSMLSNPYLVNL 141
+LG GG V+ + ++DVAVK L R + F + E + L++P +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 142 VGY----CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
G +V EY+ +L D + P + +++ A + L + H
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEY 256
++ +I+RD K +N+++ K+ DFG+A+ + +G+ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
A + A+SDVYS G V E++TG
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ---GNREFLVEVLMLSM 132
V F +LG+GGFG V ++ T + A K+L++ + G L E +L
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLP----PNRKALDWNTRMKIAHG 188
+++ ++V+L D LV M G L+ H+ + P +A+ + +
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI----- 295
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
GLE LH ++YRD K N+LLD + ++SD GLA P G + RV GT
Sbjct: 296 -CCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GT 348
Query: 249 YGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
GY APE + T D ++ G + E+I G+
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLV-EVLMLSML 133
+AT+ + P +G G +G VY+ + + VA+K + NG +G V EV +L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 134 S---NPYLVNLVGYCVDG--DQRI---LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI 185
+P +V L+ C D+ I LV+E++ + L +L PP L T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP--PGLPAETIKDL 117
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
RGL++LH + +++RD K N+L+ KL+DFGLA++ V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPV 171
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
+ T Y APE L D++S G +F E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----EVLMLSMLSNPYLVNL 141
+LG GG V+ + ++DVAVK L R + F + E + L++P +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 142 V----GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
G +V EY+ +L D + P + +++ A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEY 256
++ +I+RD K +N+++ K+ DFG+A+ + +G+ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
A + A+SDVYS G V E++TG
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----EVLMLSMLSNPYLVNL 141
+LG GG V+ + ++DVAVK L R + F + E + L++P +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 142 V----GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
G +V EY+ +L D + P + +++ A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEY 256
++ +I+RD K +N+++ K+ DFG+A+ + +G+ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
A + A+SDVYS G V E++TG
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----EVLMLSMLSNPYLVNL 141
+LG GG V+ + ++DVAVK L R + F + E + L++P +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 142 V----GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
G +V EY+ +L D + P + +++ A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEY 256
++ +I+RD K +N+++ K+ DFG+A+ + +G+ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
A + A+SDVYS G V E++TG
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF-QGNREFLV-EVLMLSMLSNPYLVNLVGY 144
+G G +GR + + + + + K+LD + ++ LV EV +L L +P +V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 145 CVDGDQRIL--VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ- 201
+D L V EY G L + R+ LD +++ L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 202 -PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
V++RD K +NV LD N KL DFGLA++ D S T V GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKTFV-GTPYYMSPEQMNRM 191
Query: 261 QLTAKSDVYSFGVVFLEI 278
KSD++S G + E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 87 LGEGGFGRVYRGKLE---GTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVN 140
LG+G FG V RG+ + G VAVK L + + +F+ EV + L + L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L G + + +V E P GSL D L ++ T + A A G+ YL ES
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYL-ESK 140
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT-YGYCAPEYALT 259
+ I+RD A N+LL K+ DFGL + P D V + +CAPE T
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+ SD + FGV E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
+ +F+ ++G G + +V +L+ T++ A++ + + + + E +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 133 LSN-PYLVNLVGYCVDGDQRIL-VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
SN P+LV L C + R+ V EY+ G L H+ RK + + R A +
Sbjct: 109 ASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAE-IS 163
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
L YLHE +IYRD K NVLLD + + KL+D+G+ K G GD ++ GT
Sbjct: 164 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTP 217
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
Y APE D ++ GV+ E++ GR D
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSM 132
+ +F+ ++G G + +V +L+ T++ A+K + + + + E +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 133 LSN-PYLVNLVGYCVDGDQRIL-VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
SN P+LV L C + R+ V EY+ G L H+ RK + + R A +
Sbjct: 66 ASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAE-IS 120
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
L YLHE +IYRD K NVLLD + + KL+D+G+ K G GD ++ GT
Sbjct: 121 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTP 174
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVID 286
Y APE D ++ GV+ E++ GR D
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHSL---D 162
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ K++DFG AK V R GT Y APE L+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV----EVLMLSMLSNPYLVNL 141
+LG GG V+ + ++DVAVK L R + F + E + L++P +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 142 V----GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
G +V EY+ +L D + P + +++ A + L + H
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 150
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-LGPTGDKSHVSTRVMGTYGYCAPEY 256
++ +I+RD K +N+++ K+ DFG+A+ + +G+ + V+GT Y +PE
Sbjct: 151 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
A + A+SDVYS G V E++TG
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-----EVLML 130
+AT+ + P +G G +G VY+ + + VA+K + G L EV +L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 131 SMLS---NPYLVNLVGYCVDG--DQRI---LVYEYMPNGSLEDHLLDLPPNRKALDWNTR 182
L +P +V L+ C D+ I LV+E++ + L +L PP L T
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPP--PGLPAETI 122
Query: 183 MKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVS 242
+ RGL++LH + +++RD K N+L+ KL+DFGLA++
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMAL 176
Query: 243 TRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
T V+ T Y APE L D++S G +F E+
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 28 EAKSLASFANI-----------SFKTESSRHRYITEELRKIGKGKNNITAKIFSYRE-LC 75
+A SL S A S KTE + +TE+L+ + + YRE +
Sbjct: 44 QAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVD----------YEYREEVH 93
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSN 135
AT LG G FG V+R + + T AVK++ F+ E++ + L++
Sbjct: 94 WATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTS 144
Query: 136 PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
P +V L G +G + E + GSL L + L + + A GLEY
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 196 LHESAQPPVIYRDFKASNVLLDQD-FNPKLSDFGLAK-LGPTGDKSHVSTR--VMGTYGY 251
LH +++ D KA NVLL D + L DFG A L P G + T + GT +
Sbjct: 201 LHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETH 257
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
APE L AK DV+S + L ++ G
Sbjct: 258 MAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 162
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ K++DFG AK V R GT Y APE L+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 14 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 73
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 74 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 131
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 132 -RFXEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 184
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 185 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 136
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 137 -RFXEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN 180
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L + K +
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKE----AKRIPEE 114
Query: 181 TRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH 240
K++ RGL YL E Q +++RD K SN+L++ KL DFG++ G D
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS-- 168
Query: 241 VSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
++ +GT Y APE + +SD++S G+ +E+ GR I
Sbjct: 169 MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
++F +LG+G FG+V + + ++ A+K++ R+ + L EV++L+ L++ Y+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYV 64
Query: 139 V----------NLVGYCVDGDQRILVY---EYMPNGSLED--HLLDLPPNRKALDWNTRM 183
V N V ++ ++ EY NG+L D H +L R W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-WRLFR 123
Query: 184 KIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK------------ 231
+I L Y+H +I+RD K N+ +D+ N K+ DFGLAK
Sbjct: 124 QIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 232 ---LGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEII 279
L + D T +GT Y A E TG K D+YS G++F E+I
Sbjct: 177 SQNLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY P G + HL + + + + R A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHSL---D 162
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+++DQ K++DFG AK V R GT Y APE L+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 136
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 137 -RFXEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 136
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 137 -RFXEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 28 EAKSLASFANI-----------SFKTESSRHRYITEELRKIGKGKNNITAKIFSYRELCV 76
+A SL S A S KTE + +TE+L+ + + YRE
Sbjct: 25 QAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVD----------YEYREEVH 74
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNP 136
T+ LG G FG V+R + + T AVK++ F+ E++ + L++P
Sbjct: 75 WATH---QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSP 126
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYL 196
+V L G +G + E + GSL L + L + + A GLEYL
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQ----LVKEQGCLPEDRALYYLGQALEGLEYL 182
Query: 197 HESAQPPVIYRDFKASNVLLDQD-FNPKLSDFGLAK-LGPTGDKSHVST--RVMGTYGYC 252
H +++ D KA NVLL D + L DFG A L P G + T + GT +
Sbjct: 183 HSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHM 239
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIITG 281
APE L AK DV+S + L ++ G
Sbjct: 240 APEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 79 TNFNPDNLLGEGGFGRVY---------RGKLEGTN--QDVAVKQLDRNGFQGNREFLVEV 127
++F +LG+G FG+V+ G L + +K DR + R+ L +V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 128 LMLSMLSNPYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA 186
++P++V L Y + ++ L+ +++ G L L + + + +A
Sbjct: 88 ------NHPFVVKL-HYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLA 137
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A GL++LH +IYRD K N+LLD++ + KL+DFGL+K +K S
Sbjct: 138 E-LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FC 191
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
GT Y APE + +D +S+GV+ E++TG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 40 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 157
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 158 -RFXEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 210
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 211 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G VY+ K + + VA+K+ LD + E+ +L L +P +V+L+
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI-AHGAARGLEYLHESAQPP 203
LV+E+M +D L N+ L ++++KI + RG+ + H+
Sbjct: 88 IHSERCLTLVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHR--- 139
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQL 262
+++RD K N+L++ D KL+DFGLA+ +S+ T + T Y AP+ + + +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKY 197
Query: 263 TAKSDVYSFGVVFLEIITGR 282
+ D++S G +F E+ITG+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 136
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 137 -RFAEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 44/271 (16%)
Query: 28 EAKSLASFAN-----------ISFKTESSRHRYITEELRKIGKGKNNITAKIFSYRELCV 76
+A SLAS A + +TE + +TE+L+ + + YRE V
Sbjct: 23 QAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD----------YEYREE-V 71
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNP 136
P LG G FG V+R K + T AVK++ F+ + E++ + LS+P
Sbjct: 72 HWMTHQPR--LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSP 124
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKALDWNTRMKIAHGAARGLE 194
+V L G +G + E + GSL + + P +AL + + A GLE
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLE 178
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFN-PKLSDFGLAK-LGPTGDKSHVST--RVMGTYG 250
YLH +++ D KA NVLL D + L DFG A L P G + T + GT
Sbjct: 179 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ APE + AK D++S + L ++ G
Sbjct: 236 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G VY+ K + + VA+K+ LD + E+ +L L +P +V+L+
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI-AHGAARGLEYLHESAQPP 203
LV+E+M +D L N+ L ++++KI + RG+ + H+
Sbjct: 88 IHSERCLTLVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHR--- 139
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQL 262
+++RD K N+L++ D KL+DFGLA+ +S+ T + T Y AP+ + + +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKY 197
Query: 263 TAKSDVYSFGVVFLEIITGR 282
+ D++S G +F E+ITG+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF-QGNREFLV-EVLMLSMLSNPYLVNLVGY 144
+G G +GR + + + + + K+LD + ++ LV EV +L L +P +V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 145 CVDGDQRIL--VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ- 201
+D L V EY G L + R+ LD +++ L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 202 -PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
V++RD K +NV LD N KL DFGLA++ + + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 261 QLTAKSDVYSFGVVFLEI 278
KSD++S G + E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-- 136
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 137 -RFSEPHARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + + T + A K + ++ + +E+ + L++ ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKAL G +YLH +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L++D K+ DFGLA K+ G++ V + GT Y APE
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + DV+S G + ++ G+ + S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTR---VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R + GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 8/198 (4%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF-QGNREFLV-EVLMLSMLSNPYLVNLVGY 144
+G G +GR + + + + + K+LD + ++ LV EV +L L +P +V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 145 CVDGDQRIL--VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ- 201
+D L V EY G L + R+ LD +++ L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 202 -PPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
V++RD K +NV LD N KL DFGLA++ + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 261 QLTAKSDVYSFGVVFLEI 278
KSD++S G + E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 15/228 (6%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 40 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 160 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 210
Query: 234 PTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ + GT Y APE L+ D ++ GV+ E+ G
Sbjct: 211 ---RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 97/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTR---VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R + GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+LG G FG+V++ + T +A K + G + E E+ +++ L + L+ L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ +LV EY+ G L D ++D N LD MK G+ ++H Q ++
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMH---QMYIL 209
Query: 206 YRDFKASNVL-LDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLT 263
+ D K N+L +++D K+ DFGLA+ +K V+ GT + APE ++
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVS 266
Query: 264 AKSDVYSFGVVFLEIITG 281
+D++S GV+ +++G
Sbjct: 267 FPTDMWSVGVIAYMLLSG 284
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPYLV 139
LG G FG+V G ++ VAVK L +E L+ E+ ++S L + +V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTR------------MKIAH 187
NL+G C G +++ EY G L + L P +N + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMG 247
A+G+ +L A I+RD A NVLL K+ DFGLA+ V
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G++ EI +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 20 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 79
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 139
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 140 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 191 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 34/223 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+GEG G V + + + VAVK++D Q EV+++ + +V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA------RGLEYLHESA 200
GD+ +V E++ G+L D + +TRM AA + L LH
Sbjct: 219 VGDELWVVMEFLEGGALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV------MGTYGYCAP 254
VI+RD K+ ++LL D KLSDFG + VS V +GT + AP
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAP 316
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
E + D++S G++ +E++ G N P + ++
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + + T + A K + ++ + +E+ + L++ ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKAL G +YLH +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L++D K+ DFGLA K+ G++ V + GT Y APE
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + DV+S G + ++ G+ + S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+GEG G V + + + VAVK++D Q RE L EV+++ + +V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA------RGLEYLHES 199
+ GD+ +V E++ G+L D + +TRM AA + L LH
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT 259
VI+RD K+ ++LL D KLSDFG + ++GT + APE
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISR 199
Query: 260 GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ D++S G++ +E++ G N P + ++
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 237
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFL-VEVLMLSMLSNPYLVNLVGYC 145
+G GGF +V T + VA+K +D+N + + E+ L L + ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
++ +V EY P G L D+++ + + TR+ + + Y+H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIIS---QDRLSEEETRV-VFRQIVSAVAYVHSQGYA--- 130
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ--LT 263
+RD K N+L D+ KL DFGL P G+K + G+ Y APE + G+ L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLG 188
Query: 264 AKSDVYSFGVVFLEIITGRRVIDN 287
+++DV+S G++ ++ G D+
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDD 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+GEG G V + + + VAVK++D Q RE L EV+++ + +V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA------RGLEYLHES 199
+ GD+ +V E++ G+L D + +TRM AA + L LH
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT 259
VI+RD K+ ++LL D KLSDFG + ++GT + APE
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISR 201
Query: 260 GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ D++S G++ +E++ G N P + ++
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 239
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 44/271 (16%)
Query: 28 EAKSLASFAN-----------ISFKTESSRHRYITEELRKIGKGKNNITAKIFSYRELCV 76
+A SLAS A + +TE + +TE+L+ + + YRE V
Sbjct: 9 QAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD----------YEYREE-V 57
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNP 136
P +G G FG V+R K + T AVK++ F+ + E++ + LS+P
Sbjct: 58 HWMTHQPR--VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSP 110
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKALDWNTRMKIAHGAARGLE 194
+V L G +G + E + GSL + + P +AL + + A GLE
Sbjct: 111 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLE 164
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFN-PKLSDFGLAK-LGPTGDKSHVSTR--VMGTYG 250
YLH +++ D KA NVLL D + L DFG A L P G + T + GT
Sbjct: 165 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ APE + AK D++S + L ++ G
Sbjct: 222 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 44/271 (16%)
Query: 28 EAKSLASFAN-----------ISFKTESSRHRYITEELRKIGKGKNNITAKIFSYRELCV 76
+A SLAS A + +TE + +TE+L+ + + YRE V
Sbjct: 25 QAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVD----------YEYREE-V 73
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNP 136
P +G G FG V+R K + T AVK++ F+ + E++ + LS+P
Sbjct: 74 HWMTHQPR--VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSP 126
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHL--LDLPPNRKALDWNTRMKIAHGAARGLE 194
+V L G +G + E + GSL + + P +AL + + A GLE
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ------ALEGLE 180
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFN-PKLSDFGLAK-LGPTGDKSHVST--RVMGTYG 250
YLH +++ D KA NVLL D + L DFG A L P G + T + GT
Sbjct: 181 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 237
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ APE + AK D++S + L ++ G
Sbjct: 238 HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+GEG G V + + + VAVK++D Q RE L EV+++ + +V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA------RGLEYLHES 199
+ GD+ +V E++ G+L D + +TRM AA + L LH
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT 259
VI+RD K+ ++LL D KLSDFG + ++GT + APE
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISR 190
Query: 260 GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ D++S G++ +E++ G N P + ++
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + + T + A K + ++ + +E+ + L++ ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKAL G +YLH +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L++D K+ DFGLA K+ G++ V + GT Y APE
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + DV+S G + ++ G+ + S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+GEG G V + + + VAVK++D Q RE L EV+++ + +V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA------RGLEYLHES 199
+ GD+ +V E++ G+L D + +TRM AA + L LH
Sbjct: 91 LVGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 200 AQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT 259
VI+RD K+ ++LL D KLSDFG + ++GT + APE
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISR 194
Query: 260 GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ D++S G++ +E++ G N P + ++
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 34/223 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+GEG G V + + + VAVK++D Q EV+++ + +V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAA------RGLEYLHESA 200
GD+ +V E++ G+L D + +TRM AA + L LH
Sbjct: 142 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV------MGTYGYCAP 254
VI+RD K+ ++LL D KLSDFG + VS V +GT + AP
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAP 239
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
E + D++S G++ +E++ G N P + ++
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVGYC 145
+GEG G V + + + + VAVK +D Q RE L EV+++ + +V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
+ G++ ++ E++ G+L D + + N + + + + L YLH VI
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQG---VI 163
Query: 206 YRDFKASNVLLDQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+RD K+ ++LL D KLSDFG A++ K ++GT + APE
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK---XLVGTPYWMAPEVISRSLYAT 220
Query: 265 KSDVYSFGVVFLEIITG 281
+ D++S G++ +E++ G
Sbjct: 221 EVDIWSLGIMVIEMVDG 237
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Query: 83 PDN-----LLGEGGFGRVYRGKLEGTNQDVAVKQLDR--NGFQGNREFLVEVLMLSMLSN 135
PDN L+G G +G VY + T ++VA+K+++R + L E+ +L+ L +
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 84
Query: 136 PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
Y++ L + D Y+ + L L L I + G +
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL-------------------GPTG 236
+HES +I+RD K +N LL+QD + K+ DFGLA+ GP
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 237 DK------SHVSTRVMGTYGYCAPEYALTGQLTAKS-DVYSFGVVFLEIIT 280
SHV TR Y APE L + KS D++S G +F E++
Sbjct: 202 KNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYLVNLVGYC 145
LGEG + VY+GK + T+ VA+K++ +G + EV +L L + +V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
LV+EY+ + L+ +L D ++ + RGL Y H V+
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHRQK---VL 122
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLTA 264
+RD K N+L+++ KL+DFGLA+ K++ + V T Y P+ L + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ D++ G +F E+ TGR + S E+ + +
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF---LVEVLMLSMLSNPYLVNLVG 143
LG G FGRV K T A+K LD+ ++ L E +L ++ P+LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D +V EY+ G + HL + + + R A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYAAQ-IVLTFEYLHSL---D 161
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM---GTYGYCAPEYALTG 260
+IYRD K N+L+DQ +++DFG AK V R GT Y APE L+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
D ++ GV+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ ++ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLSMLS 134
+F+ LG+G FG VY + + +A+K QL++ G + + E+ + S L
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLR 73
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P ++ + Y D + L+ E+ P G L L D A L
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALH 129
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-GTYGYCA 253
Y HE VI+RD K N+L+ K++DFG + P+ + R M GT Y
Sbjct: 130 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLP 181
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
PE K D++ GV+ E + G D+ TE +
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 87 LGEGGFGRVYRGKLEGTNQD-----VAVKQLDRNGFQGNREFLV-EVLMLSML-SNPYLV 139
LG G FG+V G ++ VAVK L +E L+ E+ ++S L + +V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHLL---------DLPPNR----------KALDWN 180
NL+G C G +++ EY G L + L L P + + L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 181 TRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH 240
+ + A+G+ +L A I+RD A NVLL K+ DFGLA+
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 241 VSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
V + APE T +SDV+S+G++ EI +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLSMLS 134
+F+ LG+G FG VY + + +A+K QL++ G + + E+ + S L
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLR 72
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P ++ + Y D + L+ E+ P G L L D A L
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALH 128
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-GTYGYCA 253
Y HE VI+RD K N+L+ K++DFG + P+ + R M GT Y
Sbjct: 129 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLP 180
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
PE K D++ GV+ E + G D+ TE +
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 45/257 (17%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEV---------LMLS 131
++P +++G G V R T + AVK ++ + + E L EV ++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
+ +P+++ L+ LV++ M G L D+L + + AL I
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLE 211
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ +LH + +++RD K N+LLD + +LSDFG + G+K + GT GY
Sbjct: 212 AVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGY 265
Query: 252 CAPEYALTGQ------LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFK 305
APE + D+++ GV+ ++ G +P F
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG-------------------SPPFW 306
Query: 306 DRRKFTMMADPLLEGNY 322
RR+ M+ ++EG Y
Sbjct: 307 HRRQILMLR-MIMEGQY 322
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 27/211 (12%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR-------------EFLVEVLMLSML 133
LG G +G V K + + + A+K + ++ F R E E+ +L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
+P ++ L D LV E+ G L + ++ NR D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSGI 159
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQD---FNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
YLH + +++RD K N+LL+ N K+ DFGL+ K + +GT
Sbjct: 160 CYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAY 213
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
Y APE L + K DV+S GV+ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 44/252 (17%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+G+G +G V+ GK G + VAVK + + F RE E+ ++ + ++ +
Sbjct: 45 IGKGRYGEVWMGKWRG--EKVAVKVFFTTEEASWF---RE--TEIYQTVLMRHENILGFI 97
Query: 143 GYCVDGD----QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ G Q L+ +Y NGSL D+L LD + +K+A+ + GL +LH
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 199 -----SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV----STRVMGTY 249
+P + +RD K+ N+L+ ++ ++D GLA + D + V +TRV GT
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRV-GTK 210
Query: 250 GYCAPEYALTG------QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQ----NLVTW 299
Y PE Q +D+YSFG++ E+ RR + E Q +LV
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHDLVP- 267
Query: 300 ATPLFKDRRKFT 311
+ P ++D R+
Sbjct: 268 SDPSYEDMREIV 279
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 6 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 65
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 66 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 125
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+D+ +++DFG AK
Sbjct: 126 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAK-- 176
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE L+ D ++ GV+ E+ G
Sbjct: 177 ------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+++DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y APE ++ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVG 143
++LG G F V + + T + VA+K + + +G + E+ +L + +P +V L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLD--LPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
G L+ + + G L D +++ R A ++ ++YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLHDLG- 136
Query: 202 PPVIYRDFKASNVL---LDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+++RD K N+L LD+D +SDFGL+K+ G V + GT GY APE
Sbjct: 137 --IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 259 TGQLTAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL--DRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G V++ + T Q VA+K+ + + L E+ ML L +P LVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLD-----LPPNR-KALDWNTRMKIAHGAARGLEYLHE 198
+ LV+EY + L H LD +P + K++ W T + + + H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQT--------LQAVNFCHK 120
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
I+RD K N+L+ + KL DFG A+L TG + V T Y +PE +
Sbjct: 121 HN---CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPELLV 175
Query: 259 -TGQLTAKSDVYSFGVVFLEIITG 281
Q DV++ G VF E+++G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + + T + A K + ++ + +E+ + L++ ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKAL G +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L++D K+ DFGLA K+ G++ + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 193
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + DV+S G + ++ G+ + S
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR--NGFQGNREFLVEVLMLSMLSNPY 137
N+ +L+G G +G VY + N++VA+K+++R + L E+ +L+ L + Y
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L + D Y+ + L L L I + G +++H
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL----------------------GPT 235
ES +I+RD K +N LL+QD + K+ DFGLA+ GP
Sbjct: 149 ESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 236 GDK------SHVSTRVMGTYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEII 279
SHV TR Y APE L + T D++S G +F E++
Sbjct: 206 NKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + + T + A K + ++ + +E+ + L++ ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKAL G +YLH +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L++D K+ DFGLA K+ G++ + GT Y APE
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 197
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + DV+S G + ++ G+ + S
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVG 143
++LG G F V + + T + VA+K + + +G + E+ +L + +P +V L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLD--LPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
G L+ + + G L D +++ R A ++ ++YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLHDLG- 136
Query: 202 PPVIYRDFKASNVL---LDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+++RD K N+L LD+D +SDFGL+K+ G V + GT GY APE
Sbjct: 137 --IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 259 TGQLTAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF---QGNREFLVEVLMLSMLSNPYLVNLV 142
LG+GGF + + T + A K + ++ + +E+ + L++ ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G+ D D +V E SL L+L RKAL G +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
VI+RD K N+ L++D K+ DFGLA K+ G++ + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKG 193
Query: 262 LTAKSDVYSFGVVFLEIITGRRVIDNS 288
+ + DV+S G + ++ G+ + S
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLVEVLMLSMLS 134
+F+ LG+G FG VY + + +A+K QL++ G + + E+ + S L
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLR 72
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P ++ + Y D + L+ E+ P G L L D A L
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALH 128
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM-GTYGYCA 253
Y HE VI+RD K N+L+ K++DFG + P+ + R M GT Y
Sbjct: 129 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLP 180
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
PE K D++ GV+ E + G D+ TE +
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVG 143
++LG G F V + + T + VA+K + + +G + E+ +L + +P +V L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLD--LPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
G L+ + + G L D +++ R A ++ ++YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLHDLG- 136
Query: 202 PPVIYRDFKASNVL---LDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+++RD K N+L LD+D +SDFGL+K+ D V + GT GY APE
Sbjct: 137 --IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYVAPEVLA 191
Query: 259 TGQLTAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYL-ESKR- 131
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINFRRF 189
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGK-LEGTNQDVAVKQLD-RNGFQGN-----REFLVE 126
LC A + +GEG +G+V++ + L+ + VA+K++ + G +G RE V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 127 VLMLSMLSNPYLVNLVGYCV----DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
+ L +P +V L C D + ++ LV+E++ + L +L +P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTET 121
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV 241
+ RGL++LH V++RD K N+L+ KL+DFGLA++
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
T V+ T Y APE L D++S G +F E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 87 LGEGGFGRVYRG---------KLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPY 137
LG+G F ++++G +L T +V +K LD+ + F M+S LS+ +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
LV G CV GD+ ILV E++ GSL+ + L N+ ++ ++++A A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAAAMHFLE 130
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR--VMGTYGYCAPE 255
E+ +I+ + A N+LL ++ + K + KL G V + + + PE
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 256 YALTGQ-LTAKSDVYSFGVVFLEIITG 281
+ L +D +SFG EI +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGK-LEGTNQDVAVKQLD-RNGFQGN-----REFLVE 126
LC A + +GEG +G+V++ + L+ + VA+K++ + G +G RE V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 127 VLMLSMLSNPYLVNLVGYCV----DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
+ L +P +V L C D + ++ LV+E++ + L +L +P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTET 121
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV 241
+ RGL++LH V++RD K N+L+ KL+DFGLA++
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
T V+ T Y APE L D++S G +F E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 43/232 (18%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
++F +LG+G FG+V + + ++ A+K++ R+ + L EV++L+ L++ Y+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYV 64
Query: 139 V----------NLVGYCVDGDQRILVY---EYMPNGSLED--HLLDLPPNRKALDWNTRM 183
V N V ++ ++ EY N +L D H +L R W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-WRLFR 123
Query: 184 KIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK------------ 231
+I L Y+H +I+RD K N+ +D+ N K+ DFGLAK
Sbjct: 124 QILEA----LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 232 ---LGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEII 279
L + D T +GT Y A E TG K D+YS G++F E+I
Sbjct: 177 SQNLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYLVNLVG 143
++LG G F V + + T + VA+K + + +G + E+ +L + +P +V L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLD--LPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
G L+ + + G L D +++ R A ++ ++YLH+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLHDLG- 136
Query: 202 PPVIYRDFKASNVL---LDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+++RD K N+L LD+D +SDFGL+K+ D V + GT GY APE
Sbjct: 137 --IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYVAPEVLA 191
Query: 259 TGQLTAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVM---GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
V R GT Y AP L+ D ++ GV+ E+ G
Sbjct: 190 ------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGK-LEGTNQDVAVKQLD-RNGFQGN-----REFLVE 126
LC A + +GEG +G+V++ + L+ + VA+K++ + G +G RE V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 127 VLMLSMLSNPYLVNLVGYCV----DGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNT 181
+ L +P +V L C D + ++ LV+E++ + L +L +P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTET 121
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV 241
+ RGL++LH V++RD K N+L+ KL+DFGLA++
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMA 175
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEI 278
T V+ T Y APE L D++S G +F E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 12/226 (5%)
Query: 77 ATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSN 135
+++ F LG G + VY+G + T VA+K++ + +G + E+ ++ L +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 136 PYLVNLVGYCVDGDQRILVYEYMPNG---SLEDHLLDLPPNRKALDWNTRMKIAHGAARG 192
+V L ++ LV+E+M N ++ + P + L+ N +G
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTP--RGLELNLVKYFQWQLLQG 120
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 252
L + HE+ +++RD K N+L+++ KL DFGLA+ G + + + T Y
Sbjct: 121 LAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVTLWYR 175
Query: 253 APEYALTGQLTAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
AP+ + + + S D++S G + E+ITG+ + + E+ L+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 131
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD--RNGFQGNREFLVEVLMLSML-SNPYLVNLVG 143
LG G F V + + T Q+ A K L R G E L E+ +L + S P ++NL
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
+ + IL+ EY G E L LP + + N +++ G+ YLH Q
Sbjct: 97 VYENTSEIILILEYAAGG--EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNN 151
Query: 204 VIYRDFKASNVLLDQDF---NPKLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALT 259
+++ D K N+LL + + K+ DFG++ K+G + +MGT Y APE
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR----EIMGTPEYLAPEILNY 207
Query: 260 GQLTAKSDVYSFGVVFLEIIT 280
+T +D+++ G++ ++T
Sbjct: 208 DPITTATDMWNIGIIAYMLLT 228
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 97/235 (41%), Gaps = 29/235 (12%)
Query: 57 IGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG 116
+ K K + K + + F+ LG G FGRV K + + A+K LD+
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 117 FQGNREF---LVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPN 173
++ L E +L ++ P+LV L D +V EY+ G + HL +
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 174 RKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG 233
+ + R A EYLH +IYRD K N+L+DQ +++DFG AK
Sbjct: 139 SEP---HARFYAAQ-IVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 189
Query: 234 PTGDKSHVSTRVMG-TYGYC------APEYALTGQLTAKSDVYSFGVVFLEIITG 281
RV G T+ C APE L+ D ++ GV+ E+ G
Sbjct: 190 ----------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 3 CFHYCCVAKEKFHRKSIKKSIKGYREAKSLASFANISFKTESSRHRYITEELRKIGKGK- 61
CF + + +R KK + +RE S+ + S ++ EL +GKGK
Sbjct: 41 CFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAY-IEDHSGNGTFVNTEL--VGKGKR 97
Query: 62 ---NNITA--------KIFSYRELCVATTNFNPDNL---------LGEGGFGRVYRGKLE 101
NN + K+F + +L V + P L LG G G V
Sbjct: 98 RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER 157
Query: 102 GTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYLVNLVGYCVDGDQRIL 153
T + VA++ + + F RE E+ +L L++P ++ + + D + +
Sbjct: 158 KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYI 216
Query: 154 VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA------HGAARGLEYLHESAQPPVIYR 207
V E M G L D ++ N R+K A + ++YLHE+ +I+R
Sbjct: 217 VLELMEGGELFDKVVG----------NKRLKEATCKLYFYQMLLAVQYLHENG---IIHR 263
Query: 208 DFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL---TGQ 261
D K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE + T
Sbjct: 264 DLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPEVLVSVGTAG 320
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D +S GV+ ++G
Sbjct: 321 YNRAVDCWSLGVILFICLSG 340
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAA 190
+V L+ ++ LV+E++ + L+D + + LP + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYL---------FQLL 113
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 251 YCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNG-FQGN--REFLVEVLMLSMLSNPYLVNLVG 143
+G+G FG+V + T + A+K +++ + N R E+ ++ L +P+LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D + +V + + G L HL N + ++ I L+YL
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICE-LVMALDYLQNQR--- 135
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLT 263
+I+RD K N+LLD+ + ++DF +A + P ++ ++T + GT Y APE + +
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPEMFSSRKGA 192
Query: 264 AKS---DVYSFGVVFLEIITGRR 283
S D +S GV E++ GRR
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 86 LLGEGGFGRVYR-GKLEGTN--QDVAVKQLDRNGFQGNRE----FLVEVLMLSMLSNPYL 138
+LG+GG+G+V++ K+ G N + A+K L + N + E +L + +P++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
V+L+ G + L+ EY+ G L + L ++ +A + L +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAE-ISMALGHLHQ 139
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+IYRD K N++L+ + KL+DFGL K + V+ GT Y APE +
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 259 TGQLTAKSDVYSFGVVFLEIITG 281
D +S G + +++TG
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 86 LLGEGGFGRVYR-GKLEGTN--QDVAVKQLDRNGFQGNRE----FLVEVLMLSMLSNPYL 138
+LG+GG+G+V++ K+ G N + A+K L + N + E +L + +P++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
V+L+ G + L+ EY+ G L + L ++ +A + L +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAE-ISMALGHLHQ 139
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+IYRD K N++L+ + KL+DFGL K + V+ GT Y APE +
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 259 TGQLTAKSDVYSFGVVFLEIITG 281
D +S G + +++TG
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 27/253 (10%)
Query: 46 RHRYITEELRKIGKGKNNITAKIFSY-----RELCVATTNFNPDNLL---------GEGG 91
R Y +E KI +GK +++ +Y ++ D++L G G
Sbjct: 4 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 63
Query: 92 FGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQR 151
FG V+R T + A K + E+ +S+L +P LVNL D ++
Sbjct: 64 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 123
Query: 152 ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKA 211
+++YE+M G L + + D + + ++ +GL ++HE+ ++ D K
Sbjct: 124 VMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKP 177
Query: 212 SNVLL--DQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDV 268
N++ + KL DFGL A L P K V GT + APE A + +D+
Sbjct: 178 ENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKV-TTGTAEFAAPEVAEGKPVGYYTDM 233
Query: 269 YSFGVVFLEIITG 281
+S GV+ +++G
Sbjct: 234 WSVGVLSYILLSG 246
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 3 CFHYCCVAKEKFHRKSIKKSIKGYREAKSLASFANISFKTESSRHRYITEELRKIGKGK- 61
CF + + +R KK + +RE S+ + S ++ EL +GKGK
Sbjct: 55 CFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAY-IEDHSGNGTFVNTEL--VGKGKR 111
Query: 62 ---NNITA--------KIFSYRELCVATTNFNPDNL---------LGEGGFGRVYRGKLE 101
NN + K+F + +L V + P L LG G G V
Sbjct: 112 RPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFER 171
Query: 102 GTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYLVNLVGYCVDGDQRIL 153
T + VA++ + + F RE E+ +L L++P ++ + + D + +
Sbjct: 172 KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYI 230
Query: 154 VYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA------HGAARGLEYLHESAQPPVIYR 207
V E M G L D ++ N R+K A + ++YLHE+ +I+R
Sbjct: 231 VLELMEGGELFDKVVG----------NKRLKEATCKLYFYQMLLAVQYLHENG---IIHR 277
Query: 208 DFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL---TGQ 261
D K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE + T
Sbjct: 278 DLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPEVLVSVGTAG 334
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D +S GV+ ++G
Sbjct: 335 YNRAVDCWSLGVILFICLSG 354
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 27/253 (10%)
Query: 46 RHRYITEELRKIGKGKNNITAKIFSY-----RELCVATTNFNPDNLL---------GEGG 91
R Y +E KI +GK +++ +Y ++ D++L G G
Sbjct: 110 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169
Query: 92 FGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCVDGDQR 151
FG V+R T + A K + E+ +S+L +P LVNL D ++
Sbjct: 170 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 229
Query: 152 ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKA 211
+++YE+M G L + + D + + ++ +GL ++HE+ ++ D K
Sbjct: 230 VMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKP 283
Query: 212 SNVLL--DQDFNPKLSDFGL-AKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDV 268
N++ + KL DFGL A L P K V GT + APE A + +D+
Sbjct: 284 ENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKV-TTGTAEFAAPEVAEGKPVGYYTDM 339
Query: 269 YSFGVVFLEIITG 281
+S GV+ +++G
Sbjct: 340 WSVGVLSYILLSG 352
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 133
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 191
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAA 190
+V L+ ++ LV+E++ + L+D + + LP + L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYL---------FQLL 115
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 251 YCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 131
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 128
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 186
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAA 190
+V L+ ++ LV+E++ + L+D + + LP + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYL---------FQLL 116
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 251 YCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPY-LV 139
LG G FG+V G VAVK L + RE L+ E+ +LS L N +V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL--------------LDLPPNRKALDWNTRMKI 185
NL+G C G +++ EY G L + L + + ALD +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
++ A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G+ E+ +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 159
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 217
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPY-LV 139
LG G FG+V G VAVK L + RE L+ E+ +LS L N +V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL--------------LDLPPNRKALDWNTRMKI 185
NL+G C G +++ EY G L + L + + ALD +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
++ A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G+ E+ +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPY-LV 139
LG G FG+V G VAVK L + RE L+ E+ +LS L N +V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL--------------LDLPPNRKALDWNTRMKI 185
NL+G C G +++ EY G L + L + + ALD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
++ A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G+ E+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 134
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 192
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVN 140
F ++ LG G VYR K +GT + A+K L + + E+ +L LS+P ++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIK 112
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLD--LPPNRKALDWNTRMKIAHGAARGLEYLHE 198
L + LV E + G L D +++ R A D ++ + YLHE
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAVAYLHE 166
Query: 199 SAQPPVIYRDFKASNVLLDQ---DFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +++RD K N+L D K++DFGL+K+ + + V GT GYCAPE
Sbjct: 167 NG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPE 220
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITG 281
+ D++S G++ ++ G
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSML 133
V NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA------- 186
++P +V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSY 112
Query: 187 -HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
+GL + H V++RD K N+L++ + KL+DFGLA+ G T
Sbjct: 113 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHE 167
Query: 246 MGTYGYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
+ T Y APE L + + + D++S G +F E++T R
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYL-ESKR- 511
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 569
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYL-ESKR- 136
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ + KL DFGL++ S + + APE +
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 194
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 113 LQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 13/207 (6%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FLVEV-LMLSMLS 134
++F+ ++G+G FG+V + + AVK L + +E + E ++L +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P+LV L D+ V +Y+ G L HL R L+ R A A L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAE-IASALG 153
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
YLH ++YRD K N+LLD + L+DFGL K + + ++ GT Y AP
Sbjct: 154 YLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAP 208
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E D + G V E++ G
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPY-LV 139
LG G FG+V G VAVK L + RE L+ E+ +LS L N +V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL--------------LDLPPNRKALDWNTRMKI 185
NL+G C G +++ EY G L + L + + ALD +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
++ A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G+ E+ +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 87 LGEGGFGRVYRG---------KLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPY 137
LG+G F ++++G +L T +V +K LD+ + F M+S LS+ +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
LV G C GD+ ILV E++ GSL+ + L N+ ++ ++++A A + +L
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAWAMHFLE 130
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR--VMGTYGYCAPE 255
E+ +I+ + A N+LL ++ + K + KL G V + + + PE
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 256 YALTGQ-LTAKSDVYSFGVVFLEIITG 281
+ L +D +SFG EI +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 119
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 120 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 174
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 111
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 113
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 168
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 111
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 23/221 (10%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR-EFLVEVLMLSMLSNPYL 138
+F + LG G G V++ + + +A K + R + + E+ +L ++PY+
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 139 VNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LDWNTRMKIAHGAARGLEY 195
V G + DG+ I + E+M GSL+ L +KA + K++ +GL Y
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
L E + +++RD K SN+L++ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITGRRVI------DNSRP 290
+ +SD++S G+ +E+ GR I ++SRP
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRP 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPY-LV 139
LG G FG+V G VAVK L + RE L+ E+ +LS L N +V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLEDHL--------------LDLPPNRKALDWNTRMKI 185
NL+G C G +++ EY G L + L + + ALD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
++ A+G+ +L A I+RD A N+LL K+ DFGLA+ V
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+S+G+ E+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYL-ESKR- 131
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ KL DFGL++ S + + APE +
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 189
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ +DL +K +D + I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLS--------MDL---KKFMDASALTGIPLPLIKSYLFQL 113
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ +DL +K +D + I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLS--------MDL---KKFMDASALTGIPLPLIKSYLFQL 115
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 119
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 120 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 174
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L + KS D++S G + E+++ R + ++ N +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 16/164 (9%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LD 178
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L +KA +
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIP 105
Query: 179 WNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDK 238
K++ +GL YL E + +++RD K SN+L++ KL DFG++ G D+
Sbjct: 106 EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE 161
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
++ +GT Y +PE + +SD++S G+ +E+ GR
Sbjct: 162 --MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LD 178
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L +KA +
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIP 164
Query: 179 WNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDK 238
K++ +GL YL E + +++RD K SN+L++ KL DFG++ G D
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS 220
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
++ +GT Y +PE + +SD++S G+ +E+ GR I
Sbjct: 221 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L + KS D++S G + E+++ R + ++ N +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E M ++D L D R AL + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERME--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 132 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 244
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 245 LRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 87 LGEGGFGRVYRG---KLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPYLVNLV 142
+GEG FG V++G E VA+K RE FL E L + +P++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
G + I++ E G L L + +LD + + A+ + L YL ES +
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYL-ESKR- 511
Query: 203 PVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
++RD A NVL+ KL DFGL++ S + + APE +
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPESINFRRF 569
Query: 263 TAKSDVYSFGVVFLEII 279
T+ SDV+ FGV EI+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L + KS D++S G + E+++ R + ++ N +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L + KS D++S G + E+++ R + ++ N +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G+G +G V+RG +G N VAVK R+ RE E+ ML + N++G+
Sbjct: 16 VGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRE--TELYNTVMLRHE---NILGFI 68
Query: 146 VD-------GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH- 197
Q L+ Y GSL D+L LD + ++I A GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 198 ----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL--GPTGDKSHVSTRVMGTYGY 251
+P + +RD K+ N+L+ ++ ++D GLA + T + +GT Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 252 CAPEYA-LTGQLTA-----KSDVYSFGVVFLEIITGRRVIDN 287
APE T Q+ + D+++FG+V E+ RR++ N
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LD 178
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L +KA +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIP 129
Query: 179 WNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDK 238
K++ +GL YL E + +++RD K SN+L++ KL DFG++ G D
Sbjct: 130 EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS 185
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
++ +GT Y +PE + +SD++S G+ +E+ GR I
Sbjct: 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + T + T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L + KS D++S G + E+++ R + ++ N +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LD 178
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L +KA +
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIP 121
Query: 179 WNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDK 238
K++ +GL YL E + +++RD K SN+L++ KL DFG++ G D
Sbjct: 122 EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS 177
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGR 282
++ +GT Y +PE + +SD++S G+ +E+ GR
Sbjct: 178 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 113
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 113
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 111
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 76 VATTNFNPDNL-----LGEGGFGRVYRGKLEGTNQDVAVK-----QLDRNGFQGNREFLV 125
+ T +F D+ LG+G FG VY + + ++ VA+K Q+++ G + +
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRR 72
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI 185
E+ + + L +P ++ L Y D + L+ EY P G L L D I
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATI 128
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
A L Y H VI+RD K N+LL K++DFG + P+ + +
Sbjct: 129 MEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TM 181
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
GT Y PE K D++ GV+ E++ G
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 25/209 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSN--PYLVNLVGY 144
+G G +G V + + + Q +AVK++ + ++ L+ L + M S+ PY+V G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 145 CV-DGDQRILVYEYMPNG------SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
+GD I + E M + L D+ P KI + L +L
Sbjct: 90 LFREGDCWICM-ELMSTSFDKFYKYVYSVLDDVIPE------EILGKITLATVKALNHLK 142
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE-- 255
E+ + +I+RD K SN+LLD+ N KL DFG++ G D S TR G Y APE
Sbjct: 143 ENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVD-SIAKTRDAGCRPYMAPERI 197
Query: 256 --YALTGQLTAKSDVYSFGVVFLEIITGR 282
A +SDV+S G+ E+ TGR
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G+G +G V+RG +G N VAVK R+ RE E+ ML + N++G+
Sbjct: 16 VGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRE--TELYNTVMLRHE---NILGFI 68
Query: 146 VD-------GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH- 197
Q L+ Y GSL D+L LD + ++I A GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 198 ----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL--GPTGDKSHVSTRVMGTYGY 251
+P + +RD K+ N+L+ ++ ++D GLA + T + +GT Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 252 CAPEYA-LTGQLTA-----KSDVYSFGVVFLEIITGRRVIDN 287
APE T Q+ + D+++FG+V E+ RR++ N
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYL 138
+F + LG G G V++ + + +A K + R ++ E+ +L ++PY+
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 139 VNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LDWNTRMKIAHGAARGLEY 195
V G + DG+ I + E+M GSL+ L +KA + K++ +GL Y
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
L E + +++RD K SN+L++ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
+ +SD++S G+ +E+ GR I
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 113
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 168
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 115
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 114
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 169
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 114
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 169
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 114
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 169
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 115
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 111
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 29/292 (9%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSM--L 133
V + P LG G +G V + + + Q +AVK++ ++ L+ L +SM +
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 107
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
P+ V G + E M + SL+ + + + + KIA + L
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 166
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+LH VI+RD K SNVL++ K+ DFG++ G D S T G Y A
Sbjct: 167 EHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVD-SVAKTIDAGCKPYMA 221
Query: 254 PEYALTGQL-----TAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRR 308
PE + +L + KSD++S G+ +E+ R D +W TP F+ +
Sbjct: 222 PE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP-FQQLK 268
Query: 309 KFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAH 360
+ P L + K + + + CL++ + RP +++ + H
Sbjct: 269 QVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 317
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 41/304 (13%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLSN 135
NF + +G G F VYR VA+K++ D + + + E+ +L L++
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 136 PYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEY 195
P ++ ++ ++ +V E G L + ++ + T K LE+
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+H V++RD K +NV + KL D GL + K+ + ++GT Y +PE
Sbjct: 152 MHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPE 206
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMAD 315
KSD++S G + E + +P + D+ +
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYE------------------MAALQSPFYGDKMNLYSLCK 248
Query: 316 PLLEGNYPI-------KGLYQALAVAAMCLQEEAGTRPMMSDVVTAIEYLAHSKEEACIE 368
+ + +YP + L Q + MC+ + RP ++ V Y + AC
Sbjct: 249 KIEQCDYPPLPSDHYSEELRQ---LVNMCINPDPEKRPDVTYV-----YDVAKRMHACTA 300
Query: 369 DSLD 372
SL+
Sbjct: 301 SSLE 304
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 107/259 (41%), Gaps = 46/259 (17%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG--------FQGNRE-FLVEVLML 130
N+ P +LG G V R + T ++ AVK +D G Q RE L EV +L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 131 SMLS-NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+S +P ++ L LV++ M G L D+L + + L KI
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRAL 133
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ LH+ +++RD K N+LLD D N KL+DFG + G+K V GT
Sbjct: 134 LEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTP 187
Query: 250 GYCAPEYALTGQ------LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPL 303
Y APE + D++S GV+ ++ G +P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-------------------SPP 228
Query: 304 FKDRRKFTMMADPLLEGNY 322
F R++ M+ ++ GNY
Sbjct: 229 FWHRKQMLMLR-MIMSGNY 246
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+L++ + K+ DFGLA++ P D + T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 116
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 117 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 171
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-EVLMLSMLSNPYL 138
+F + LG G G V++ + + +A K + R ++ E+ +L ++PY+
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 139 VNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LDWNTRMKIAHGAARGLEY 195
V G + DG+ I + E+M GSL+ L +KA + K++ +GL Y
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIPEQILGKVSIAVIKGLTY 119
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
L E + +++RD K SN+L++ KL DFG++ G D ++ +GT Y +PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPE 173
Query: 256 YALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
+ +SD++S G+ +E+ GR I
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD-RNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+G+G +G V+RG +G N VAVK R+ RE E+ ML + N++G+
Sbjct: 45 VGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRE--TELYNTVMLRHE---NILGFI 97
Query: 146 VD-------GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH- 197
Q L+ Y GSL D+L LD + ++I A GL +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 198 ----ESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL--GPTGDKSHVSTRVMGTYGY 251
+P + +RD K+ N+L+ ++ ++D GLA + T + +GT Y
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 252 CAPEYA-LTGQLTA-----KSDVYSFGVVFLEIITGRRVIDN 287
APE T Q+ + D+++FG+V E+ RR++ N
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 252
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAA 190
+V L+ ++ LV+E++ + L+ + + LP + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYL---------FQLL 112
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 167
Query: 251 YCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 107/259 (41%), Gaps = 46/259 (17%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG--------FQGNRE-FLVEVLML 130
N+ P +LG G V R + T ++ AVK +D G Q RE L EV +L
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 131 SMLS-NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+S +P ++ L LV++ M G L D+L + + L KI
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRAL 120
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ LH+ +++RD K N+LLD D N KL+DFG + G+K V GT
Sbjct: 121 LEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTP 174
Query: 250 GYCAPEYALTGQ------LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPL 303
Y APE + D++S GV+ ++ G +P
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-------------------SPP 215
Query: 304 FKDRRKFTMMADPLLEGNY 322
F R++ M+ ++ GNY
Sbjct: 216 FWHRKQMLMLR-MIMSGNY 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LD 178
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L +KA +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIP 102
Query: 179 WNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDK 238
K++ +GL YL E + +++RD K SN+L++ KL DFG++ G D
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS 158
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
++ +GT Y +PE + +SD++S G+ +E+ GR I
Sbjct: 159 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 122 EFLVEVLMLSMLSNPYLVNLVG-YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKA--LD 178
+ + E+ +L ++PY+V G + DG+ I + E+M GSL+ L +KA +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVL------KKAGRIP 102
Query: 179 WNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDK 238
K++ +GL YL E + +++RD K SN+L++ KL DFG++ G D
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS 158
Query: 239 SHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVI 285
++ +GT Y +PE + +SD++S G+ +E+ GR I
Sbjct: 159 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQL-DRNGFQGNRE-FLVEVLMLSMLSNPYLVNL 141
D +G G F VY+G T +VA +L DR + R+ F E L L +P +V
Sbjct: 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 142 VGY---CVDGDQRI-LVYEYMPNGSLEDHLLDLPPNR-KAL-DWNTRMKIAHGAARGLEY 195
V G + I LV E +G+L+ +L + K L W ++ +GL++
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQF 144
Query: 196 LHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAP 254
LH + PP+I+RD K N+ + K+ D GLA L ++ + V+GT + AP
Sbjct: 145 LH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAP 199
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIIT 280
E + DVY+FG LE T
Sbjct: 200 E-XYEEKYDESVDVYAFGXCXLEXAT 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 107/259 (41%), Gaps = 46/259 (17%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNG--------FQGNRE-FLVEVLML 130
N+ P +LG G V R + T ++ AVK +D G Q RE L EV +L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 131 SMLS-NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGA 189
+S +P ++ L LV++ M G L D+L + + L KI
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRAL 133
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+ LH+ +++RD K N+LLD D N KL+DFG + G+K V GT
Sbjct: 134 LEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTP 187
Query: 250 GYCAPEYALTGQ------LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPL 303
Y APE + D++S GV+ ++ G +P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-------------------SPP 228
Query: 304 FKDRRKFTMMADPLLEGNY 322
F R++ M+ ++ GNY
Sbjct: 229 FWHRKQMLMLR-MIMSGNY 246
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHL-------LDLPPNRKALDWNTRMKIAHGAA 190
+V L+ ++ LV+E++ + L+ + + LP + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYL---------FQLL 116
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 251 YCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 120/288 (41%), Gaps = 42/288 (14%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P ++A + + + + H
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RV 245
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 212
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLF 304
+ APE T +SDV+SFGV+ EI + G + EE
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 263
Query: 305 KDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
+ ++ T M P +Y +YQ + C E RP S++V
Sbjct: 264 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 304
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALDWNTRMKIAH------G 188
NL+G C G +++ E+ G+L +L + P + + + + H
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGT 248
A+G+E+L A I+RD A N+LL + K+ DFGLA+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 249 YGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 16/216 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G + R + TN + AVK +D++ + E +E+L L +P ++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYD 91
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
DG LV E M G L D +L +K + H + +EYLH V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHSQG---VVH 144
Query: 207 RDFKASNVL-LDQDFNP---KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
RD K SN+L +D+ NP ++ DFG AK ++ + T + APE
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 263 TAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
D++S G++ ++ G N + ++T
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 39/286 (13%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD-WNTRMKIAH------ 187
NL+G C G +++ E+ G+L +L + P + D + + + H
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMG 247
A+G+E+L A I+RD A N+LL + K+ DFGLA+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKD 306
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 263
Query: 307 RRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 264 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 302
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 99/238 (41%), Gaps = 59/238 (24%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
+F L+G GGFG+V++ K + ++++ N + RE V L+ L + V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDH---V 65
Query: 140 NLVGY--CVDGDQRILVYEYMP---NGSLEDHLLDLPPNRK------------------- 175
N+V Y C DG ++Y P + SLE D P N K
Sbjct: 66 NIVHYNGCWDG------FDYDPETSDDSLESSDYD-PENSKNSSRSKTKCLFIQMEFCDK 118
Query: 176 -------------ALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP 222
LD +++ +G++Y+H +I+RD K SN+ L
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQV 175
Query: 223 KLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII 279
K+ DFGL L G + TR GT Y +PE + + D+Y+ G++ E++
Sbjct: 176 KIGDFGLVTSLKNDGKR----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 16/216 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G + R + TN + AVK +D++ + E +E+L L +P ++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYD 91
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
DG LV E M G L D +L +K + H + +EYLH V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHSQG---VVH 144
Query: 207 RDFKASNVL-LDQDFNP---KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
RD K SN+L +D+ NP ++ DFG AK ++ + T + APE
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 263 TAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
D++S G++ ++ G N + ++T
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT 238
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+ + LD + E+ +L L++P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 112
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+ + LD + E+ +L L++P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 111
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ G T + T
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 72 RELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FLVEVL 128
R L + +++ ++G G FG V + + + + A+K L + + F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 129 MLSMLSNPYLVNLVGYCVDGDQRIL--VYEYMPNGSLEDHLLDLP-PNRKALDWNTRMKI 185
+++ ++P++V L +C D + L V EYMP G L + + + P + A + + +
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVL 185
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTR 244
A L+ +H +I+RD K N+LLD+ + KL+DFG K+ TG H T
Sbjct: 186 A------LDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDTA 235
Query: 245 VMGTYGYCAPEYALT----GQLTAKSDVYSFGVVFLEIITG 281
V GT Y +PE + G + D +S GV E++ G
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 116/287 (40%), Gaps = 40/287 (13%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A+G+E+L A I+RD A N+LL + K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFK 305
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCR 253
Query: 306 DRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 254 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 293
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPY 137
NF +GEG +G VY+ + + T + VA+K+ LD + E+ +L L++P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA--------HGA 189
+V L+ ++ LV+E++ DL +K +D + I
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ--------DL---KKFMDASALTGIPLPLIKSYLFQL 115
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
+GL + H V++RD K N+L++ + KL+DFGLA+ +++ V T
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 170
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGR 282
Y APE L + + + D++S G +F E++T R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 43/232 (18%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
++F +LG+G FG+V + + ++ A+K++ R+ + L EV +L+ L++ Y+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYV 64
Query: 139 V----------NLVGYCVDGDQRILVY---EYMPNGSLED--HLLDLPPNRKALDWNTRM 183
V N V ++ ++ EY N +L D H +L R W
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-WRLFR 123
Query: 184 KIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK------------ 231
+I L Y+H +I+R+ K N+ +D+ N K+ DFGLAK
Sbjct: 124 QILEA----LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 232 ---LGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEII 279
L + D T +GT Y A E TG K D YS G++F E I
Sbjct: 177 SQNLPGSSDN---LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 116/287 (40%), Gaps = 40/287 (13%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A+G+E+L A I+RD A N+LL + K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFK 305
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCR 253
Query: 306 DRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 254 RLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 293
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYL 138
LG G G V T + VA+K + + F RE E+ +L L++P +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ + + D + +V E M G L D ++ K L T + ++YLHE
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 256 YAL---TGQLTAKSDVYSFGVVFLEIITG 281
+ T D +S GV+ ++G
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYL 138
LG G G V T + VA+K + + F RE E+ +L L++P +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ + + D + +V E M G L D ++ K L T + ++YLHE
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 256 YAL---TGQLTAKSDVYSFGVVFLEIITG 281
+ T D +S GV+ ++G
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RV 245
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLF 304
+ APE T +SDV+SFGV+ EI + G + EE
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 252
Query: 305 KDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
+ ++ T M P +Y +YQ + C E RP S++V
Sbjct: 253 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 293
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYL 138
LG G G V T + VA+K + + F RE E+ +L L++P +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ + + D + +V E M G L D ++ K L T + ++YLHE
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE
Sbjct: 132 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 185
Query: 256 YAL---TGQLTAKSDVYSFGVVFLEIITG 281
+ T D +S GV+ ++G
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG-Y 144
+LG+G +G VY G+ +A+K++ + ++ E+ + L + +V +G +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLD----LPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
+G +I + E +P GSL L L N + + + T+ + GL+YLH++
Sbjct: 89 SENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ 142
Query: 201 QPPVIYRDFKASNVLLDQDFNP-KLSDFG----LAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+++RD K NVL++ K+SDFG LA + P + GT Y APE
Sbjct: 143 ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAPE 193
Query: 256 YALTGQ--LTAKSDVYSFGVVFLEIITGR 282
G +D++S G +E+ TG+
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYL 138
LG G G V T + VA+K + + F RE E+ +L L++P +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ + + D + +V E M G L D ++ K L T + ++YLHE
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 256 YAL---TGQLTAKSDVYSFGVVFLEIITG 281
+ T D +S GV+ ++G
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLG-PTGDKSHVSTRVMGTY 249
RGL+Y+H + V++RD K SN+LL+ + K+ DFGLA++ P D + + T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 250 GYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
Y APE L + KS D++S G + E+++ R +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A+G+E+L A I+RD A N+LL + K+ DFGLA+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQG-NREFLVEVLMLSMLSNPY-LV 139
LG G FG+V G T + VAVK L +R + E+ +L + + +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKA----LDWNTRMKIAHGAA 190
NL+G C G +++ E+ G+L +L + P + L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV---STRVMG 247
+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARL-- 208
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKD 306
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FXRR 259
Query: 307 RRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 260 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 298
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
+F L+G GGFG+V++ K + +K++ N + R EV L+ L + V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDH---V 64
Query: 140 NLVGY--CVDG-----------DQR------ILVYEYMPNGSLEDHLLDLPPNRKALDWN 180
N+V Y C DG R + E+ G+LE + + LD
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKV 122
Query: 181 TRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKS 239
+++ +G++Y+H +I RD K SN+ L K+ DFGL L G +
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 240 HVSTRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII 279
R GT Y +PE + + D+Y+ G++ E++
Sbjct: 180 ----RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RV 245
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLF 304
+ APE T +SDV+SFGV+ EI + G + EE
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FC 252
Query: 305 KDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
+ ++ T M P +Y +YQ + C E RP S++V
Sbjct: 253 RRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 293
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 117/284 (41%), Gaps = 38/284 (13%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLLD-----LPPNRKALDWNTRMKI---AHGAA 190
NL+G C G +++ E+ G+L +L +P D+ T + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RVMGTY 249
+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPL 210
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKDRR 308
+ APE T +SDV+SFGV+ EI + G + EE + +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRRLK 261
Query: 309 KFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
+ T M P +Y +YQ + C E RP S++V
Sbjct: 262 EGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 298
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD--RNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG FG+ K + +K+++ R + E EV +L+ + +P +V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLD----LPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
+ +V +Y G L + L + LDW ++ +A L+++H+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRK 145
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
+++RD K+ N+ L +D +L DFG+A++ ++ +GT Y +PE
Sbjct: 146 ---ILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 261 QLTAKSDVYSFGVVFLEIIT 280
KSD+++ G V E+ T
Sbjct: 201 PYNNKSDIWALGCVLYELCT 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 147 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 199
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 259
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 260 LRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 42/269 (15%)
Query: 76 VATTNFNPDNLLGEGGFGRVYR-GKLEG--TNQDVAVKQLDRNGF----QGNREFLVEVL 128
V NF +LG G +G+V+ K+ G T + A+K L + + E
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 129 MLSML-SNPYLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIA 186
+L + +P+LV L Y + ++ L+ +Y+ G L HL R+ +
Sbjct: 111 VLEHIRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYV 165
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
LE+LH+ +IYRD K N+LLD + + L+DFGL+K D++ +
Sbjct: 166 GEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFC 221
Query: 247 GTYGYCAPEYALTGQL--TAKSDVYSFGVVFLEIITG-----------------RRVIDN 287
GT Y AP+ G D +S GV+ E++TG RR++ +
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 281
Query: 288 SRPTEEQNLVTWATPLFKDRRKFTMMADP 316
P ++ + L KD + +M DP
Sbjct: 282 EPPYPQE-----MSALAKDLIQRLLMKDP 305
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 88 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 137
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 192
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 193 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ--GNRE------FLVEVLMLSMLSNPYL 138
LG G G V T + VA+K + + F RE E+ +L L++P +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ + + D + +V E M G L D ++ K L T + ++YLHE
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 199 SAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+ +I+RD K NVLL ++D K++DFG +K+ G+ S + T + GT Y APE
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 192
Query: 256 YAL---TGQLTAKSDVYSFGVVFLEIITG 281
+ T D +S GV+ ++G
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RV 245
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 210
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQG-NREFLVEVLMLSMLSNPY-LV 139
LG G FG+V G T + VAVK L +R + E+ +L + + +V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV---ST 243
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 247
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATP 302
R+ + APE T +SDV+SFGV+ EI + G + EE
Sbjct: 248 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------- 296
Query: 303 LFKDRRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
+ ++ T M P +Y +YQ + C E RP S++V
Sbjct: 297 FCRRLKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 339
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 160 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 272
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 148 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 200
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 260
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 261 LRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 133 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 245
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG-Y 144
+LG+G +G VY G+ +A+K++ + ++ E+ + L + +V +G +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLD----LPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
+G +I + E +P GSL L L N + + + T+ + GL+YLH++
Sbjct: 75 SENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ 128
Query: 201 QPPVIYRDFKASNVLLDQDFNP-KLSDFG----LAKLGPTGDKSHVSTRVMGTYGYCAPE 255
+++RD K NVL++ K+SDFG LA + P + GT Y APE
Sbjct: 129 ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQYMAPE 179
Query: 256 YALTGQ--LTAKSDVYSFGVVFLEIITGR 282
G +D++S G +E+ TG+
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 175 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 227
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 287
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 110 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 167 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 219
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 279
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 280 LRPSDRPTFEEIQNHPWMQDVLL 302
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 22 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 78 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 127
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 183 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 133 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 245
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 40/226 (17%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLD---RNGFQGNREFLVEVLMLSMLS-NPYLVNLV 142
LG+G +G V++ T + VAVK++ +N R F E+++L+ LS + +VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 143 GYC-VDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKA--LDWNTRMKIAHGAARGLEYLHE 198
D D+ + LV++YM DL +A L+ + + + + ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET--------DLHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-------------------LGPTGDKS 239
+++RD K SN+LL+ + + K++DFGL++ D
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 240 HVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
+ T + T Y APE L + + T D++S G + EI+ G+ +
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 161 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLA 273
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 160 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLA 272
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 74 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 131 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 183
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 243
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 244 LRPSDRPTFEEIQNHPWMQDVLL 266
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 161 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLA 273
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 160 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLA 272
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPY 137
T+F P LG GGFG V+ K + + + A+K++ + RE + EV L+ L +P
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSL--------EDHLLDLPPNRKALDWNTRMKIAH-- 187
+V ++ + + P L +++L D R ++ R H
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A +E+LH +++RD K SN+ D K+ DFGL ++ M
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 247 ----------GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII 279
GT Y +PE + K D++S G++ E++
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 45 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 100
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 101 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 150
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 205
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 206 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 87 LGEGGFGRVYRGKLEG-----TNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL--V 139
LG G FG+V G T + VAVK L L+ L + + +L V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 140 NLVGYCVD-GDQRILVYEYMPNGSLEDHLL----DLPPNRKALD--WNTRMKIAH----- 187
NL+G C G +++ E+ G+L +L + P + A + + + + H
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 188 -GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
A+G+E+L A I+RD A N+LL + K+ DFGLA+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 247 GTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 133 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 245
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 132 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 244
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 245 LRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 46 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 101
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 102 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 151
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 206
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 207 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G + R + TN + AVK +D++ E +E+L L +P ++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYD 86
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
DG +V E M G L D +L +K + + +EYLH V++
Sbjct: 87 DGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 207 RDFKASNVL-LDQDFNP---KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
RD K SN+L +D+ NP ++ DFG AK ++ + T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 263 TAKSDVYSFGVVFLEIITG 281
A D++S GV+ ++TG
Sbjct: 198 DAACDIWSLGVLLYTMLTG 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 128 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 240
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G +G V T VAVK+L R FQ L +L + N++G
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIG--- 95
Query: 147 DGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIAHGAARGL 193
L+ + P SLE+ HL+ N +K D + + I + RGL
Sbjct: 96 ------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 148
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR Y A
Sbjct: 149 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 200
Query: 254 PEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
PE L D++S G + E++TGR + + ++ L+
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ---GNREFLVEVLMLSMLSNPYLV---N 140
+G G +G V + T Q VA+K++ N F + L E+ +L + ++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIP-NAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
++ V + VY + +E L + + + L + RGL+Y+H SA
Sbjct: 121 ILRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH-SA 177
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH--VSTRVMGTYGYCAPEYAL 258
Q VI+RD K SN+L++++ K+ DFG+A+ T H T + T Y APE L
Sbjct: 178 Q--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 259 T-GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ + T D++S G +F E++ R++ + L+
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 22 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPNR-----KALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N K D + + I
Sbjct: 78 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI- 127
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 183 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 148 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 200
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 260
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 261 LRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 128 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ +E Q+L+ W
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLA 240
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 148 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 200
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 260
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 261 LRPXDRPTFEEIQNHPWMQDVLL 283
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 147 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 199
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 259
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 260 LRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 15/220 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQ---GNREFLVEVLMLSMLSNPYLV---N 140
+G G +G V + T Q VA+K++ N F + L E+ +L + ++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIP-NAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
++ V + VY + +E L + + + L + RGL+Y+H SA
Sbjct: 122 ILRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH-SA 178
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSH--VSTRVMGTYGYCAPEYAL 258
Q VI+RD K SN+L++++ K+ DFG+A+ T H T + T Y APE L
Sbjct: 179 Q--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 259 T-GQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
+ + T D++S G +F E++ R++ + L+
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 31 NLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 87 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 136
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-- 191
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 192 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 89 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 138
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-- 193
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 194 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 89 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 138
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-- 193
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 194 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 29/278 (10%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSM--L 133
V + P LG G +G V + + + Q +AVK++ ++ L+ L +SM +
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 63
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
P+ V G + E M + SL+ + + + + KIA + L
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+LH VI+RD K SNVL++ K+ DFG++ + G Y A
Sbjct: 123 EHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMA 177
Query: 254 PEYALTGQL-----TAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRR 308
PE + +L + KSD++S G+ +E+ R D +W TP F+ +
Sbjct: 178 PE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP-FQQLK 224
Query: 309 KFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRP 346
+ P L + K + + + CL++ + RP
Sbjct: 225 QVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 259
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLM 129
C + + +G+G FG V++ + T Q VA+K++ ++ GF L E+ +
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA--LREIKI 70
Query: 130 LSMLSNPYLVNLVGYC---VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMK-I 185
L +L + +VNL+ C R Y+ E L L N + +K +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK---LGPTGDKSHVS 242
GL Y+H + +++RD KA+NVL+ +D KL+DFGLA+ L +
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 243 TRVMGTYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
RV+ T Y PE L + D++ G + E+ T ++ + TE+ L
Sbjct: 188 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 88 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 137
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 192
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 193 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 78 TTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLS 134
+++F +LLGEG +G V + T + VA+K++ D+ F L E+ +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFK 67
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNR----KALDWNTRMKIAHGAA 190
+ ++ + QR +E + L+ +R + L + +
Sbjct: 68 HENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL---------GPTGDKSHV 241
R ++ LH S VI+RD K SN+L++ + + K+ DFGLA++ PTG +S +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 STRVMGTYGYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
T + T Y APE LT +++ DV+S G + E+ R +
Sbjct: 180 -TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 180 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 232
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 292
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 293 LRPSDRPTFEEIQNHPWMQDVLL 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 89 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 138
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-- 193
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 194 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 78 TTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLS 134
+++F +LLGEG +G V + T + VA+K++ D+ F L E+ +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFK 67
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNR----KALDWNTRMKIAHGAA 190
+ ++ + QR +E + L+ +R + L + +
Sbjct: 68 HENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL---------GPTGDKSHV 241
R ++ LH S VI+RD K SN+L++ + + K+ DFGLA++ PTG +S +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 STRVMGTYGYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
T + T Y APE LT +++ DV+S G + E+ R +
Sbjct: 180 -TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 161 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLA 273
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 161 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLA 273
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 160 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLA 272
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV-----------------EVLM 129
L +G F ++ E N+ A+K+ +++ + R+F E+ +
Sbjct: 39 LNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI 96
Query: 130 LSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSL---EDHLLDLPPNRKALDWNTRMK-I 185
++ + N Y + G + D+ ++YEYM N S+ +++ L N +K I
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRV 245
Y+H + + +RD K SN+L+D++ KLSDFG ++ DK +R
Sbjct: 157 IKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEY--MVDKKIKGSR- 211
Query: 246 MGTYGYCAPEY--ALTGQLTAKSDVYSFGV 273
GTY + PE+ + AK D++S G+
Sbjct: 212 -GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 31 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 87 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 136
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-- 191
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 192 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 107/263 (40%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E ++D L D R AL + + H
Sbjct: 118 VIRLLDWFERPDSFVLILER--PEPVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 175 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 227
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 287
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLL-----DLPPNRKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ ++ +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 31 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 87 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 136
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 191
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 192 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 38 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 93
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 94 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 143
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 198
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 199 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 25 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 80
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 81 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 130
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 131 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 185
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 186 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 37 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 92
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 93 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 142
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-- 197
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 198 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 89 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 138
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 193
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 194 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 38 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 93
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 94 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 143
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 198
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 199 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 31 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 87 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 136
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 191
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 192 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 23 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 78
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 79 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 128
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 183
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 184 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 84 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 133
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 188
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 189 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 84 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 133
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 188
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 189 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 37 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 92
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 93 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 142
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 197
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 198 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 88 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 137
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 192
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 193 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 22 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 78 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 127
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 183 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 98 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 155 NCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 207
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 267
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 268 LRPSDRPTFEEIQNHPWMQDVLL 290
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 22 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 78 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 127
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ V+TR
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-- 182
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 183 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 24 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 79
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 80 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 129
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 130 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 184
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 185 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLL-----DLPPNRKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ ++ +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSMLSNPY-- 137
LLG GGFG VY G N VA+K ++++ E +EV++L +S+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 138 LVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
++ L+ + D +L+ E P ++D L D R AL + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPE-PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
V++RD K N+L+D + KL DFG L K V T GT Y PE+
Sbjct: 128 NXG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 257 ALTGQLTAKS-DVYSFGVVFL-------------EIITGRRVIDNSRPTEEQNLVTWAT- 301
+ +S V+S G++ EII G+ E Q+L+ W
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLA 240
Query: 302 ------PLFKDRRKFTMMADPLL 318
P F++ + M D LL
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 46 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 101
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 102 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 151
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 206
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 207 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG---NREFLVEVLMLSMLSNPYLVNLVG 143
+G G +G V Q VAVK+L R FQ R E+ +L L + N++G
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHE---NVIG 83
Query: 144 YCVDGDQRILVYEYMPNGSLEDHL-LDLPPNRKALDWNTRMK-----------IAHGAAR 191
L+ + P S+ED + L D N +K + + R
Sbjct: 84 ---------LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
GL+Y+H + +I+RD K SNV +++D ++ DFGLA+ +V+TR Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 252 CAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNS 288
APE L D++S G + E++ G+ + S
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 45 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 100
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 101 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 150
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 205
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 206 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 84 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 133
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 188
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 189 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 46 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 101
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 102 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 151
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ V+TR
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-- 206
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 207 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 88 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 137
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-- 192
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 193 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 23 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 78
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 79 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 128
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 183
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 184 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 49 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 104
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 105 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 154
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-- 209
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 210 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 84 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 133
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-- 188
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 189 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 49 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 104
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 105 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 154
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 209
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 210 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLM 129
C + + +G+G FG V++ + T Q VA+K++ ++ GF L E+ +
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA--LREIKI 70
Query: 130 LSMLSNPYLVNLVGYC---VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMK-I 185
L +L + +VNL+ C R Y+ E L L N + +K +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK---LGPTGDKSHVS 242
GL Y+H + +++RD KA+NVL+ +D KL+DFGLA+ L +
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 243 TRVMGTYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
RV+ T Y PE L + D++ G + E+ T ++ + TE+ L
Sbjct: 188 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLM 129
C + + +G+G FG V++ + T Q VA+K++ ++ GF L E+ +
Sbjct: 12 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA--LREIKI 69
Query: 130 LSMLSNPYLVNLVGYC---VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMK-I 185
L +L + +VNL+ C R Y+ E L L N + +K +
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK---LGPTGDKSHVS 242
GL Y+H + +++RD KA+NVL+ +D KL+DFGLA+ L +
Sbjct: 130 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 243 TRVMGTYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
RV+ T Y PE L + D++ G + E+ T ++ + TE+ L
Sbjct: 187 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 238
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
+LG G F V+ K T + A+K + ++ + E+ +L + + +V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
LV + + G L D +L+ R + ++YLHE+ ++
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 206 YRDFKASNVL-LDQDFNPK--LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
+RD K N+L L + N K ++DFGL+K+ G + + GT GY APE
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPY 184
Query: 263 TAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 185 SKAVDCWSIGVITYILLCG 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 42/247 (17%)
Query: 54 LRKIGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD 113
+RK G K ++ + + V+ T+ +G G +G V + + + VA+K+L
Sbjct: 5 IRKKGFYKQDVNKTAWELPKTYVSPTH------VGSGAYGSVCSAIDKRSGEKVAIKKLS 58
Query: 114 RNGFQGN---REFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLE---DHL 167
R FQ + E+L+L + + N++G L+ + P SL D
Sbjct: 59 R-PFQSEIFAKRAYRELLLLKHMQHE---NVIG---------LLDVFTPASSLRNFYDFY 105
Query: 168 LDLPPNRKALDWNTRMK--------IAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQD 219
L +P + L +K + + +GL+Y+H + V++RD K N+ +++D
Sbjct: 106 LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNED 162
Query: 220 FNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEI 278
K+ DFGLA+ +V TR Y APE L+ D++S G + E+
Sbjct: 163 CELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
Query: 279 ITGRRVI 285
+TG+ +
Sbjct: 218 LTGKTLF 224
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG---NREFLVEVLMLSMLSNPYLVNLVG 143
+G G +G V Q VAVK+L R FQ R E+ +L L + N++G
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHE---NVIG 91
Query: 144 YCVDGDQRILVYEYMPNGSLEDHL-LDLPPNRKALDWNTRMK-----------IAHGAAR 191
L+ + P S+ED + L D N +K + + R
Sbjct: 92 ---------LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
GL+Y+H + +I+RD K SNV +++D ++ DFGLA+ +V+TR Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 252 CAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNS 288
APE L D++S G + E++ G+ + S
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 67 KIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV- 125
KIF ++E LG G F V + + T + AVK + + +G +
Sbjct: 22 KIFEFKET------------LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN 69
Query: 126 EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKI 185
E+ +L + + +V L + LV + + G L D +++ + D +T ++
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-DASTLIRQ 128
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVS 242
A + YLH +++RD K N+L D++ +SDFGL+K+ GD V
Sbjct: 129 VLDA---VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VM 179
Query: 243 TRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ GT GY APE + D +S GV+ ++ G
Sbjct: 180 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + +GT ++ A K + + +R E EV +L + +P ++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L + +++L + + G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 135
Query: 201 QPPVIYRDFKASNV-LLDQDF-NP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ NP KL DFG+A G++ + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG---NREFLVEVLMLSMLSNPYLVNLVG 143
+G G +G V Q VAVK+L R FQ R E+ +L L + N++G
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHE---NVIG 91
Query: 144 YCVDGDQRILVYEYMPNGSLEDHL-LDLPPNRKALDWNTRMK-----------IAHGAAR 191
L+ + P S+ED + L D N +K + + R
Sbjct: 92 ---------LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
GL+Y+H + +I+RD K SNV +++D ++ DFGLA+ +V+TR Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 252 CAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNS 288
APE L D++S G + E++ G+ + S
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLM 129
C + + +G+G FG V++ + T Q VA+K++ ++ GF L E+ +
Sbjct: 13 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA--LREIKI 70
Query: 130 LSMLSNPYLVNLVGYC---VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMK-I 185
L +L + +VNL+ C R Y+ E L L N + +K +
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 186 AHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK---LGPTGDKSHVS 242
GL Y+H + +++RD KA+NVL+ +D KL+DFGLA+ L +
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 243 TRVMGTYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
RV+ T Y PE L + D++ G + E+ T ++ + TE+ L
Sbjct: 188 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQL 239
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 42/247 (17%)
Query: 54 LRKIGKGKNNITAKIFSYRELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLD 113
+RK G K ++ + + V+ T+ +G G +G V + + + VA+K+L
Sbjct: 23 IRKKGFYKQDVNKTAWELPKTYVSPTH------VGSGAYGSVCSAIDKRSGEKVAIKKLS 76
Query: 114 RNGFQGN---REFLVEVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLE---DHL 167
R FQ + E+L+L + + N++G L+ + P SL D
Sbjct: 77 RP-FQSEIFAKRAYRELLLLKHMQHE---NVIG---------LLDVFTPASSLRNFYDFY 123
Query: 168 LDLPPNRKALDWNTRMK--------IAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQD 219
L +P + L M+ + + +GL+Y+H + V++RD K N+ +++D
Sbjct: 124 LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNED 180
Query: 220 FNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEI 278
K+ DFGLA+ +V TR Y APE L+ D++S G + E+
Sbjct: 181 CELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 279 ITGRRVI 285
+TG+ +
Sbjct: 236 LTGKTLF 242
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + +GT ++ A K + + +R E EV +L + +P ++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L + +++L + + G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 128
Query: 201 QPPVIYRDFKASNV-LLDQDF-NP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ NP KL DFG+A G++ + GT + APE
Sbjct: 129 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 182
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ T D+ T +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE---MTGXV 183
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
T Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 72 RELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FLVEVL 128
R+L + ++ ++G G FG V + + T + A+K L + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 129 MLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLP-PNRKALDWNTRMKIAH 187
+++ ++P++V L D +V EYMP G L + + + P + A + + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVM 246
A + ++H RD K N+LLD+ + KL+DFG K+ G T V
Sbjct: 187 DAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAV- 235
Query: 247 GTYGYCAPEYALT----GQLTAKSDVYSFGVVFLEIITG 281
GT Y +PE + G + D +S GV E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 78 TTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL---DRNGFQGNREFLVEVLMLSMLS 134
+++F +LLGEG +G V + T + VA+K++ D+ F L E+ +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT--LREIKILKHFK 67
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNR----KALDWNTRMKIAHGAA 190
+ ++ + QR +E + L+ +R + L + +
Sbjct: 68 HENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKL---------GPTGDKSHV 241
R ++ LH S VI+RD K SN+L++ + + K+ DFGLA++ PTG +S +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 STRVMGTYGYCAPEYALTGQLTAKS-DVYSFGVVFLEIITGRRV 284
+ T Y APE LT +++ DV+S G + E+ R +
Sbjct: 180 -VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L + FQ L +L +
Sbjct: 38 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHMKHE 93
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 94 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 143
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 198
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 199 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ D+GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 72 RELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FLVEVL 128
R+L + ++ ++G G FG V + + T + A+K L + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 129 MLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLP-PNRKALDWNTRMKIAH 187
+++ ++P++V L D +V EYMP G L + + + P + A + + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVM 246
A + ++H RD K N+LLD+ + KL+DFG K+ G T V
Sbjct: 187 DAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAV- 235
Query: 247 GTYGYCAPEYALT----GQLTAKSDVYSFGVVFLEIITG 281
GT Y +PE + G + D +S GV E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLL-----DLPPNRKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ ++ ++K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DFGL + +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 72 RELCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FLVEVL 128
R+L + ++ ++G G FG V + + T + A+K L + + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 129 MLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLP-PNRKALDWNTRMKIAH 187
+++ ++P++V L D +V EYMP G L + + + P + A + + +A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 188 GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLA-KLGPTGDKSHVSTRVM 246
A + ++H RD K N+LLD+ + KL+DFG K+ G T V
Sbjct: 182 DAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAV- 230
Query: 247 GTYGYCAPEYALT----GQLTAKSDVYSFGVVFLEIITG 281
GT Y +PE + G + D +S GV E++ G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVN 140
F + + G+G FG V GK + T VA+K++ ++ NRE + + L++L +P +V
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 141 LVGYCV---DGDQRIL----VYEYMPNGSLEDHLLDLPPN---RKALDWNTRMKI-AHGA 189
L Y + D+R + V EY+P D L N R+ +K+
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQ-DFNPKLSDFGLA-KLGPT-GDKSHVSTRVM 246
R + LH + V +RD K NVL+++ D KL DFG A KL P+ + +++ +R
Sbjct: 139 IRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY- 196
Query: 247 GTYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEIITGRRVI--DNS 288
Y APE Q T D++S G +F E++ G + DNS
Sbjct: 197 ----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + +GT ++ A K + + +R E EV +L + +P ++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L + +++L + + G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 149
Query: 201 QPPVIYRDFKASNV-LLDQDF-NP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ NP KL DFG+A G++ + GT + APE
Sbjct: 150 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 203
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVL-----MLSMLSNPYLV 139
++G+G F V R T Q AVK +D F + E L + ML +P++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 140 NLV-GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
L+ Y DG +V+E+M L ++ A + +H + LE L
Sbjct: 90 ELLETYSSDG-MLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 199 SAQPPVIYRDFKASNVLLDQDFNP---KLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAP 254
+I+RD K NVLL N KL DFG+A +LG +G V+ +GT + AP
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG---LVAGGRVGTPHFMAP 202
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E DV+ GV+ +++G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G +G V + +AVK+L R FQ L +L + N++G
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHENVIG--- 114
Query: 147 DGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIAHGAARGL 193
L+ + P SLE+ HL+ N +K D + + I + RGL
Sbjct: 115 ------LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGL 167
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
+Y+H + +I+RD K SN+ +++D K+ DFGLA+ +V+TR Y A
Sbjct: 168 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 219
Query: 254 PEYALTG-QLTAKSDVYSFGVVFLEIITGR 282
PE L D++S G + E++TGR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ DF LA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
L E G +++G+ +G + V V ++ + +R+F E L + S+P ++ ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 147 D--GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
L+ +MP GSL + L + +D + +K A ARG+ +LH + +P +
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLH-TLEPLI 134
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLT- 263
+ +V++D+D ++S +A + S S M + APE AL +
Sbjct: 135 PRHALNSRSVMIDEDMTARIS---MADV----KFSFQSPGRMYAPAWVAPE-ALQKKPED 186
Query: 264 ---AKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEG 320
+D++SF V+ E++T R V F D + LEG
Sbjct: 187 TNRRSADMWSFAVLLWELVT-REVP------------------FADLSNMEIGMKVALEG 227
Query: 321 NYPI--KGLYQALA-VAAMCLQEEAGTRPMMSDVVTAIEYL 358
P G+ ++ + +C+ E+ RP +V +E +
Sbjct: 228 LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G + R + TN + AVK +D++ E +E+L L +P ++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYD 86
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
DG +V E G L D +L +K + + +EYLH V++
Sbjct: 87 DGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQG---VVH 139
Query: 207 RDFKASNVL-LDQDFNP---KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
RD K SN+L +D+ NP ++ DFG AK + + T T + APE
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXTPCY-TANFVAPEVLERQGY 197
Query: 263 TAKSDVYSFGVVFLEIITG 281
A D++S GV+ +TG
Sbjct: 198 DAACDIWSLGVLLYTXLTG 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 38/217 (17%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + E++++ ++++
Sbjct: 28 NLKP---IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 84 ---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTP 184
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S GV+ E+I G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ FGLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 31/284 (10%)
Query: 76 VATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLS--ML 133
V + P LG G +G V + + + Q AVK++ ++ L+ L +S +
Sbjct: 31 VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV 90
Query: 134 SNPYLVNLVGYCV-DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARG 192
P+ V G +GD + + + + SL+ + + + + KIA +
Sbjct: 91 DCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 148
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYC 252
LE+LH VI+RD K SNVL++ K DFG++ + G Y
Sbjct: 149 LEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYX 203
Query: 253 APEYALTGQL-----TAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDR 307
APE + +L + KSD++S G+ +E+ R D +W TP F+
Sbjct: 204 APE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD-----------SWGTP-FQQL 250
Query: 308 RKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDV 351
++ P L + K + + + CL++ + RP ++
Sbjct: 251 KQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 185 IAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
+ + +GL Y+H + +I+RD K N+ +++D K+ DFGLA+ + V TR
Sbjct: 133 LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR 189
Query: 245 VMGTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNS 288
Y APE L + T D++S G + E+ITG+ + S
Sbjct: 190 -----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ D GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ D GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 44/220 (20%)
Query: 80 NFNPDNLLGEGGFGRV---YRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSML 133
N P +G G G V Y LE ++VA+K+L R N R + E++++ ++
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILE---RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGA 189
++ N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 81 NHK---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHER 127
Query: 190 AR--------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV 241
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S +
Sbjct: 128 MSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFM 181
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
T + T Y APE L D++S GV+ E+I G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLD--RNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
L+G+G FG+VY G+ G +VA++ +D R+ + F EV+ + +V +G
Sbjct: 40 LIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
C+ ++ +L + D + LD N +IA +G+ YLH
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 204 VIYRDFKASNVLLDQDFNPKLSDFGLAKL------GPTGDKSHVSTRVMGTYGYCAPEYA 257
++++D K+ NV D ++DFGL + G DK + G + APE
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPE-- 204
Query: 258 LTGQLTA-----------KSDVYSFGVVFLEI 278
+ QL+ SDV++ G ++ E+
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLV 139
N +P +G G +G V T VAVK+L R FQ L +L +
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVGYCVDGDQRILVYEYMPNGSLED--------HLLDLPPN-----RKALDWNTRMKIA 186
N++G L+ + P SLE+ HL+ N +K D + + I
Sbjct: 82 NVIG---------LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI- 131
Query: 187 HGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVM 246
+ RGL+Y+H + +I+RD K SN+ +++D K+ D GLA+ +V+TR
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-- 186
Query: 247 GTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
Y APE L D++S G + E++TGR + + ++ L+
Sbjct: 187 ---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
++G G FG V++ KL +++ VA+K++ ++ NRE + + ++ +P +V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQI----MRIVKHPNVVDLKAFF 101
Query: 146 V-DGDQRI-----LVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
+GD++ LV EY+P H L L M + R L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQLLRSLAYIH 158
Query: 198 ESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ +RD K N+LLD KL DFG AK+ G+ + + + Y Y APE
Sbjct: 159 SIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSRY-YRAPEL 212
Query: 257 AL-TGQLTAKSDVYSFGVVFLEIITGR 282
T D++S G V E++ G+
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 52/259 (20%)
Query: 46 RHRYITEELRKIGKGKNNITAKIFS--YRELCVATTNFNPDNLLGEGGFGRVYRGKLEGT 103
R +Y+ E L AK F+ +E+ + +F ++G G FG V K++ T
Sbjct: 48 RDKYVAEFLE---------WAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNT 98
Query: 104 NQDVAVKQLDR---------NGFQGNREFLVE-------VLMLSMLSNPYLVNLVGYCVD 147
+ A+K L++ F+ R+ LV L + +L ++ Y V
Sbjct: 99 ERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVG 158
Query: 148 GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYR 207
GD L+ ++ ED L P A + M +A + L Y+H R
Sbjct: 159 GDLLTLLSKF------EDKL----PEDMARFYIGEMVLAIDSIHQLHYVH---------R 199
Query: 208 DFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT-----GQL 262
D K NVLLD + + +L+DFG + L D + S+ +GT Y +PE G+
Sbjct: 200 DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 258
Query: 263 TAKSDVYSFGVVFLEIITG 281
+ D +S GV E++ G
Sbjct: 259 GPECDWWSLGVCMYEMLYG 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 52/259 (20%)
Query: 46 RHRYITEELRKIGKGKNNITAKIFS--YRELCVATTNFNPDNLLGEGGFGRVYRGKLEGT 103
R +Y+ E L AK F+ +E+ + +F ++G G FG V K++ T
Sbjct: 64 RDKYVAEFLE---------WAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNT 114
Query: 104 NQDVAVKQLDR---------NGFQGNREFLVE-------VLMLSMLSNPYLVNLVGYCVD 147
+ A+K L++ F+ R+ LV L + +L ++ Y V
Sbjct: 115 ERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVG 174
Query: 148 GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYR 207
GD L+ ++ ED L P A + M +A + L Y+H R
Sbjct: 175 GDLLTLLSKF------EDKL----PEDMARFYIGEMVLAIDSIHQLHYVH---------R 215
Query: 208 DFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALT-----GQL 262
D K NVLLD + + +L+DFG + L D + S+ +GT Y +PE G+
Sbjct: 216 DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 274
Query: 263 TAKSDVYSFGVVFLEIITG 281
+ D +S GV E++ G
Sbjct: 275 GPECDWWSLGVCMYEMLYG 293
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
D LGEG F + + +NQ AVK + + + N + + L L +P +V L
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCE-GHPNIVKLHE 73
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D LV E + G L + + +K I + ++H+
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMHDVG--- 126
Query: 204 VIYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
V++RD K N+L + + K+ DFG A+L P D + T T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAPELLNQN 184
Query: 261 QLTAKSDVYSFGVVFLEIITGR 282
D++S GV+ +++G+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 29 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 78
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 79 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 184
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G V++ K T++ VA+K+ LD + L E+ +L L + +V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ LV+E+ + L+ + LD +GL + H V
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
++RD K N+L++++ KL+DFGLA+ + + + V T Y P+ +L +
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 265 KS-DVYSFGVVFLEIITGRRVIDNSRPTEEQ 294
S D++S G +F E+ R + ++Q
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 44/220 (20%)
Query: 80 NFNPDNLLGEGGFGRV---YRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSML 133
N P +G G G V Y LE ++VA+K+L R N R + E++++ ++
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILE---RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGA 189
++ N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 81 NHK---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHER 127
Query: 190 AR--------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV 241
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFM 181
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
T + T Y APE L D++S G + E+I G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE---FLVEVLMLSMLSNP 136
+F ++G G FG V KL+ ++ A+K L++ E F E +L +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSL-------EDHLLDLPPNRKALDWNTRMKIAHGA 189
++ L D + LV +Y G L ED L P A + M IA +
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL----PEEMARFYLAEMVIAIDS 190
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
L Y+H RD K N+L+D + + +L+DFG + L D + S+ +GT
Sbjct: 191 VHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTP 240
Query: 250 GYCAPEYALT-----GQLTAKSDVYSFGVVFLEIITG 281
Y +PE G+ + D +S GV E++ G
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+++LGEG RV T+Q+ AVK +++ EV ML V +
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
+ + R LV+E M GS+ H+ R+ + + A L++LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG-- 131
Query: 203 PVIYRDFKASNVLLDQ--DFNP-KLSDFGLAK-LGPTGDKSHVSTRVM----GTYGYCAP 254
+ +RD K N+L + +P K+ DFGL + GD S +ST + G+ Y AP
Sbjct: 132 -IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 255 EYALTGQLTA-----KSDVYSFGVVFLEIITG 281
E A + D++S GV+ +++G
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYY 191
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
APE L A D++S G + E++ G + + ++ N V
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 44/220 (20%)
Query: 80 NFNPDNLLGEGGFGRV---YRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSML 133
N P +G G G V Y LE ++VA+K+L R N R + E++++ ++
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILE---RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVV 80
Query: 134 SNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGA 189
++ N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 81 NHK---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHER 127
Query: 190 AR--------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV 241
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S +
Sbjct: 128 MSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFM 181
Query: 242 STRVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
T + T Y APE L D++S G + E+I G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSMLSNP--- 136
+ D+L+G+G FG+V + + VA+K + ++ F + +EV +L +++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ--IEVRLLELMNKHDTE 113
Query: 137 ---YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
Y+V+L + + + LV+E M + +L D L + N + + N K A L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRN--TNFRGVSLNLTRKFAQQMCTAL 170
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
+L + + +I+ D K N+LL NPK S + G + + + + Y +
Sbjct: 171 LFL-ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRS 226
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
PE L D++S G + +E+ TG + + ++ N +
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+G G G V +++VA+K+L R N R + VLM
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-------------- 115
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR------- 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 192 -GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T + T
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 228
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
Y APE L D++S G + E++ GR ID EQ
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + E++++ +++
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
+++L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 84 NIISLLNV------------FTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTP 184
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAH---- 187
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 188 ----GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T + + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYY 189
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLV 297
APE L D++S G + E++ G + + ++ N V
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+G G G V +++VA+K+L R N R + VLM
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-------------- 70
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAH--------GAA 190
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 129
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T + T
Sbjct: 130 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRY 183
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
Y APE L D++S G + E++ GR ID EQ
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+G G G V +++VA+K+L R N R + VLM
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-------------- 115
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR------- 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 192 -GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T + T
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 228
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
Y APE L D++S G + E++ GR ID EQ
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSMLSNP--- 136
+ D+L+G+G FG+V + + VA+K + ++ F + +EV +L +++
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ--IEVRLLELMNKHDTE 94
Query: 137 ---YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
Y+V+L + + + LV+E M + +L D L + N + + N K A L
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRN--TNFRGVSLNLTRKFAQQMCTAL 151
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
+L + + +I+ D K N+LL NPK S + G + + + + Y +
Sbjct: 152 LFL-ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRS 207
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
PE L D++S G + +E+ TG + + ++ N +
Sbjct: 208 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+G G G V +++VA+K+L R N R + VLM
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-------------- 71
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR------- 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 192 -GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T + T
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + VLM
Sbjct: 29 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM------- 78
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 79 -------KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 184
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + VLM
Sbjct: 27 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM------- 76
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 77 -------KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMS 128
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 129 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 182
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + VLM
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM------- 77
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 78 -------KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 183
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + VLM
Sbjct: 29 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM------- 78
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 79 -------KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMT 184
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+G G G V +++VA+K+L R N R + VLM
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-------------- 70
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR------- 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 129
Query: 192 -GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T + T
Sbjct: 130 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 183
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
Y APE L D++S G + E++ GR ID EQ
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+G G G V +++VA+K+L R N R + VLM
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-------------- 71
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR------- 191
CV+ I L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEE-FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 192 -GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T + T
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRY 184
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + E++++ +++
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
+++L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 84 NIISLLNV------------FTPQKTLEE-FQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTP 184
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM +
Sbjct: 33 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK- 88
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 89 ---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSY 135
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 136 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 189
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT------GRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM +
Sbjct: 22 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK- 77
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 78 ---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSY 124
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 125 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTP 178
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT------GRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQD--VAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
LGEGGF Y +EG + A+K++ + Q E E M + ++P ++ LV Y
Sbjct: 37 LGEGGFS--YVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 145 CVD----GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
C+ + L+ + G+L + + L L + + + G RGLE +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 201 QPPVIYRDFKASNVLLDQDFNPKLSDFG---LAKLGPTGDKSHVSTRVMG----TYGYCA 253
+RD K +N+LL + P L D G A + G + ++ + T Y A
Sbjct: 155 ---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 254 PE-YALTGQ--LTAKSDVYSFGVVFLEIITG 281
PE +++ + ++DV+S G V ++ G
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V +++VA+K+L R N R + E++++ +++
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAH----- 187
+++L+ + P +LE+ D+ + +D N +M++ H
Sbjct: 84 NIISLLNV------------FTPQKTLEE-FQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 188 ---GAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S + T
Sbjct: 131 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTP 184
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEII------TGRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 18/200 (9%)
Query: 87 LGEGGFG--RVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+G G FG R+ R KL T + VAVK ++R G + E++ L +P +V
Sbjct: 28 IGSGNFGVARLMRDKL--TKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ ++ EY G L + + N + G+ Y H S Q +
Sbjct: 85 ILTPTHLAIIMEYASGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCH-SMQ--I 137
Query: 205 IYRDFKASNVLLDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQL 262
+RD K N LLD P K+ DFG +K + + +GT Y APE L +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEY 194
Query: 263 TAK-SDVYSFGVVFLEIITG 281
K +DV+S GV ++ G
Sbjct: 195 DGKIADVWSCGVTLYVMLVG 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 40/218 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM
Sbjct: 30 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM------- 79
Query: 137 YLVNLVGYCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR 191
CV+ I L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 80 -------KCVNHKNIIGLLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 131
Query: 192 --------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST 243
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S +
Sbjct: 132 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMV 185
Query: 244 RVMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ T Y APE L D++S G + E+I G
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G FG + + N+ VAVK ++R G + + E++ L +P +V +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY G L + + N + G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYAHAMQ---VAH 138
Query: 207 RDFKASNVLLDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
RD K N LLD P K++DFG +K + + +GT Y APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA---VGTPAYIAPEVLLKKEYDG 195
Query: 265 K-SDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
K +DV+S GV ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G FG + + +N+ VAVK ++R G + + E++ L +P +V +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY G L + + N + G+ Y H V +
Sbjct: 85 TPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQ---VCH 137
Query: 207 RDFKASNVLLDQDFNPKLS--DFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
RD K N LLD P+L DFG +K + + +GT Y APE L +
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDG 194
Query: 265 K-SDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
K +DV+S GV ++ G ++ P E +N
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLS-NPYLVNLVG 143
LLGEG + +V ++ AVK +++ EV L N ++ L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
+ D + LV+E + GS+ H+ +K + ++ A L++LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTKG--- 131
Query: 204 VIYRDFKASNVLLD--QDFNP-KLSDFGLAKLGPTGDKSHVS---------TRVMGTYGY 251
+ +RD K N+L + + +P K+ DF L +G K + S T G+ Y
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLG----SGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 252 CAPEY--ALTGQLT---AKSDVYSFGVVFLEIITG 281
APE T Q T + D++S GVV +++G
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G V++ K T++ VA+K+ LD + L E+ +L L + +V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ LV+E+ + L+ + LD +GL + H V
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
++RD K N+L++++ KL++FGLA+ + + + V T Y P+ +L +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYS 180
Query: 265 KS-DVYSFGVVFLEIITGRRVIDNSRPTEEQ 294
S D++S G +F E+ R + ++Q
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 75 CVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRN------GFQGN-------- 120
CV + + +G+G +G V E N A+K L + GF
Sbjct: 9 CVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRP 68
Query: 121 ------------REFLVEVLMLSMLSNPYLVNLVGYCVDG--DQRILVYEYMPNGSLEDH 166
+ E+ +L L +P +V LV D D +V+E + G + +
Sbjct: 69 APGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME- 127
Query: 167 LLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSD 226
P K L + +G+EYLH +I+RD K SN+L+ +D + K++D
Sbjct: 128 ----VPTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIAD 180
Query: 227 FGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ--LTAKS-DVYSFGVVFLEIITGR 282
FG++ D + + +GT + APE + + K+ DV++ GV + G+
Sbjct: 181 FGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 16/225 (7%)
Query: 81 FNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQL-DRNGFQGNREFLVEVLMLSMLSNP--- 136
+ D+L+G+G FG+V + + VA+K + ++ F + +EV +L +++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQ--IEVRLLELMNKHDTE 113
Query: 137 ---YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGL 193
Y+V+L + + + LV+E M + +L D L + N + + N K A L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRN--TNFRGVSLNLTRKFAQQMCTAL 170
Query: 194 EYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
+L + + +I+ D K N+LL NPK + G + + + + Y +
Sbjct: 171 LFL-ATPELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRS 226
Query: 254 PEYALTGQLTAKSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVT 298
PE L D++S G + +E+ TG + + ++ N +
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G VY+ + + A+K+ L++ + E+ +L L + +V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ +LV+E++ LLD+ L+ T G+ Y H+ V
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLT 263
++RD K N+L++++ K++DFGLA+ G T + T Y AP+ + + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 264 AKSDVYSFGVVFLEIITG 281
D++S G +F E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+++LGEG RV T+Q+ AVK +++ EV ML V +
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 144 YCVDGDQRI-LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQP 202
+ + R LV+E M GS+ H+ R+ + + A L++LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHNKG-- 131
Query: 203 PVIYRDFKASNVLLDQ--DFNP-KLSDFGLAK-LGPTGDKSHVSTRVM----GTYGYCAP 254
+ +RD K N+L + +P K+ DF L + GD S +ST + G+ Y AP
Sbjct: 132 -IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 255 EYALTGQLTA-----KSDVYSFGVVFLEIITG 281
E A + D++S GV+ +++G
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G VY+ + + A+K+ L++ + E+ +L L + +V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ +LV+E++ LLD+ L+ T G+ Y H+ V
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLT 263
++RD K N+L++++ K++DFGLA+ G T + T Y AP+ + + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 264 AKSDVYSFGVVFLEIITG 281
D++S G +F E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQ--LDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG +G VY+ + + A+K+ L++ + E+ +L L + +V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ +LV+E++ LLD+ L+ T G+ Y H+ V
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR---V 121
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL-TGQLT 263
++RD K N+L++++ K++DFGLA+ G T + T Y AP+ + + + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 264 AKSDVYSFGVVFLEIITG 281
D++S G +F E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T + A K + + + +R E EV +L + +P ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L +++L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ + KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYLVNLVGY 144
LG+G F V R + Q+ A K ++ +++ E + +L +P +V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ LV++ + G L + ++ A ++ + +H + LE ++ Q +
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 205 IYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++RD K N+LL KL+DFGLA + G++ GT GY +PE
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQ-QAWFGFAGTPGYLSPEVLRKDP 209
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D+++ GV+ ++ G
Sbjct: 210 YGKPVDIWACGVILYILLVG 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM +
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK- 83
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 84 ---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S +
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEP 184
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT------GRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G FG + + +N+ VAVK ++R G + E++ L +P +V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY G L + + N + G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQ---VCH 138
Query: 207 RDFKASNVLLDQDFNPKLS--DFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
RD K N LLD P+L DFG +K + + +GT Y APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDG 195
Query: 265 K-SDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
K +DV+S GV ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF-----QGNREFLVEVLMLSMLSNPYLV 139
++LG+G V+RG+ + T A+K + F REF V L L++ +V
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV----LKKLNHKNIV 70
Query: 140 NLVGYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
L + R +L+ E+ P GSL +L+ P N L + + + G+ +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 198 ESAQPPVIYRDFKASNVL--LDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ +++R+ K N++ + +D KL+DFG A+ D+ VS + GT Y
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-ELEDDEQFVS--LYGTEEYLH 183
Query: 254 PEYALTGQLT--------AKSDVYSFGVVFLEIITG 281
P+ L A D++S GV F TG
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYLVNLVGY 144
LG+G F V R T Q+ A K ++ +++ E + +L +P +V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ LV++ + G L + ++ A ++ + +H + LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 205 IYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++RD K N+LL + KL+DFGLA + GD+ GT GY +PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D+++ GV+ ++ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNPYLVNLVG 143
++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++ Y G
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 114
Query: 144 YCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
D LV +Y+P + H + M + R L Y+H
Sbjct: 115 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLAYIHSFG- 170
Query: 202 PPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGYCAPEYAL 258
+ +RD K N+LLD D KL DFG AK G+ S++ +R Y APE
Sbjct: 171 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 223
Query: 259 -TGQLTAKSDVYSFGVVFLEIITGRRVI 285
T+ DV+S G V E++ G+ +
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 41 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 100
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 161 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 239 SHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRVI 285
S++ +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 215 SYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNP 136
++ ++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
Y G D LV +Y+P + H + M + R L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLA 136
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGY 251
Y+H + +RD K N+LLD D KL DFG AK G+ S++ +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 252 CAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
APE T+ DV+S G V E++ G+ +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDR--NGFQGNREFLVEVLMLSMLSNPYLVNLV 142
+L+G G +G V + + VA+K++ R + L E+ +L+ L++ ++V ++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 143 GYCVDGD----QRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ D + V + + + L P L T + + G++Y+H
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKK-LFRTPVYLTELHIKT---LLYNLLVGVKYVHS 174
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAK-------------LGPTGDKSHVST-- 243
+ +++RD K +N L++QD + K+ DFGLA+ + P D ++ T
Sbjct: 175 AG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 244 -------RVMG---TYGYCAPEYALTGQ-LTAKSDVYSFGVVFLEII 279
++ G T Y APE L + T DV+S G +F E++
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNPYLVNLVG 143
++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++ Y G
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 99
Query: 144 YCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
D LV +Y+P + H + M + R L Y+H
Sbjct: 100 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLAYIHSFG- 155
Query: 202 PPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGYCAPEYAL 258
+ +RD K N+LLD D KL DFG AK G+ S++ +R Y APE
Sbjct: 156 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 208
Query: 259 -TGQLTAKSDVYSFGVVFLEIITGRRV 284
T+ DV+S G V E++ G+ +
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPI 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 86 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 145
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 206 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 239 SHVSTRVMGTYGYCAPEYALTG-QLTAKSDVYSFGVVFLEIITGRRVI 285
S++ +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 260 SYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNPYLVNLVG 143
++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++ Y G
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 91
Query: 144 YCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
D LV +Y+P + H + M + R L Y+H
Sbjct: 92 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLAYIHSFG- 147
Query: 202 PPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGYCAPEYAL 258
+ +RD K N+LLD D KL DFG AK G+ S++ +R Y APE
Sbjct: 148 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIF 200
Query: 259 -TGQLTAKSDVYSFGVVFLEIITGRRV 284
T+ DV+S G V E++ G+ +
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQPI 227
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 43 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 102
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 163 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 239 SHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRVI 285
S++ +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 217 SYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVL-----MLSMLSNPYLV 139
++G+G F V R T Q AVK +D F + E L + ML +P++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 140 NLV-GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
L+ Y DG +V+E+M L ++ A + +H + LE L
Sbjct: 90 ELLETYSSDG-MLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 199 SAQPPVIYRDFKASNVLLDQDFNP---KLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAP 254
+I+RD K VLL N KL FG+A +LG +G V+ +GT + AP
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMAP 202
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E DV+ GV+ +++G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 45 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 104
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 165 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 239 SHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRVI 285
S++ +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 219 SYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
++ ++G G FG VY+ KL + + VA+K++ ++ NRE + + L + +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNI 75
Query: 139 VNL-VGYCVDGDQRILVY-----EYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
V L + G+++ +VY +Y+P + H + M +
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 132
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMG 247
R L Y+H + +RD K N+LLD D KL DFG AK G+ S + +R
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 248 TYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
Y APE T+ DV+S G V E++ G+ +
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYLVNLVGY 144
LG+G F V R T Q+ A K ++ +++ E + +L +P +V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ LV++ + G L + ++ A ++ + +H + LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 205 IYRDFKASNVLL---DQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++RD K N+LL + KL+DFGLA + GD+ GT GY +PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D+++ GV+ ++ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 44/236 (18%)
Query: 80 NFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDR---NGFQGNREFLVEVLMLSMLSNP 136
N P +G G G V ++VA+K+L R N R + VLM +
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK- 83
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN----TRMKIAHGAAR- 191
N++G L+ + P SLE+ D+ + +D N +M++ H
Sbjct: 84 ---NIIG---------LLNVFTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 192 -------GLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTR 244
G+++LH + +I+RD K SN+++ D K+ DFGLA+ T S +
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEP 184
Query: 245 VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT------GRRVIDNSRPTEEQ 294
+ T Y APE L D++S G + E++ GR ID EQ
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVL-----MLSMLSNPYLV 139
++G+G F V R T Q AVK +D F + E L + ML +P++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 140 NLV-GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
L+ Y DG +V+E+M L ++ A + +H + LE L
Sbjct: 92 ELLETYSSDG-MLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 199 SAQPPVIYRDFKASNVLLDQDFNP---KLSDFGLA-KLGPTGDKSHVSTRVMGTYGYCAP 254
+I+RD K VLL N KL FG+A +LG +G V+ +GT + AP
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMAP 204
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
E DV+ GV+ +++G
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNP 136
++ ++G G FG VY+ KL + + VA+K++ + NRE + ++ +++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
Y G D LV +Y+P + H + M + R L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLA 136
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGY 251
Y+H + +RD K N+LLD D KL DFG AK G+ S++ +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 252 CAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
APE T+ DV+S G V E++ G+ +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 31/275 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
L E G +++G+ +G + V V ++ + +R+F E L + S+P ++ ++G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 147 D--GDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
L+ + P GSL + L + +D + +K A ARG +LH + +P +
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEG--TNFVVDQSQAVKFALDXARGXAFLH-TLEPLI 134
Query: 205 IYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
+ +V +D+D ++S + + + + V PE T + +A
Sbjct: 135 PRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPED--TNRRSA 192
Query: 265 KSDVYSFGVVFLEIITGRRVIDNSRPTEEQNLVTWATPLFKDRRKFTMMADPLLEGNYPI 324
D +SF V+ E++T R V F D + LEG P
Sbjct: 193 --DXWSFAVLLWELVT-REVP------------------FADLSNXEIGXKVALEGLRPT 231
Query: 325 --KGLYQALA-VAAMCLQEEAGTRPMMSDVVTAIE 356
G+ ++ + +C E+ RP +V +E
Sbjct: 232 IPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNP 136
++ ++G G FG VY+ KL + + VA+K++ + NRE + ++ +++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
Y G D LV +Y+P + H + M + R L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLA 136
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGY 251
Y+H + +RD K N+LLD D KL DFG AK G+ S++ +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 252 CAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
APE T+ DV+S G V E++ G+ +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+N +G G +G V +GT A K++ + + F E+ ++ L +P ++ L
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D LV E G L + ++ +++ + +I + Y H+
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKLN--- 126
Query: 204 VIYRDFKASNVLL--DQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
V +RD K N L D +P KL DFGLA G + T+V GT Y +P+ L G
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYVSPQ-VLEG 182
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 183 LYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 84 DNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVG 143
+N +G G +G V +GT A K++ + + F E+ ++ L +P ++ L
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 144 YCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPP 203
D LV E G L + ++ +++ + +I + Y H+
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKLN--- 143
Query: 204 VIYRDFKASNVLL--DQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTG 260
V +RD K N L D +P KL DFGLA G + T+V GT Y +P+ L G
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYVSPQ-VLEG 199
Query: 261 QLTAKSDVYSFGVVFLEIITG 281
+ D +S GV+ ++ G
Sbjct: 200 LYGPECDEWSAGVMMYVLLCG 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
++G+G FG+V + +Q VA+K + RN + +R+ E+ +L L
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQ--------- 153
Query: 146 VDGDQRILVYEYMPNGSLEDH-----------LLDLPPNRKALDWNTRM--KIAHGAARG 192
D D + V + N + +H L +L K ++ + K AH +
Sbjct: 154 -DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
L+ LH++ +I+ D K N+LL Q K+ DFG + + V T + +
Sbjct: 213 LDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF- 264
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
Y APE L + D++S G + E++TG
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYLVNLVGY 144
LG+G F V R Q+ A K ++ +++ E + +L +P +V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ L+++ + G L + ++ A ++ + +H + LE + Q V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 205 IYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++RD K N+LL KL+DFGLA + G++ GT GY +PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQ-AWFGFAGTPGYLSPEVLRKDP 200
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D+++ GV+ ++ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
++G+G FG+V + +Q VA+K + RN + +R+ E+ +L L
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQ--------- 153
Query: 146 VDGDQRILVYEYMPNGSLEDH-----------LLDLPPNRKALDWNTRM--KIAHGAARG 192
D D + V + N + +H L +L K ++ + K AH +
Sbjct: 154 -DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
L+ LH++ +I+ D K N+LL Q K+ DFG + + V T + +
Sbjct: 213 LDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF- 264
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
Y APE L + D++S G + E++TG
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 29/227 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 19 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 78
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 139 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 239 SHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
S + +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 193 SXICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNP 136
++ ++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
Y G D LV +Y+P + H + M + R L
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLA 136
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGY 251
Y+H + +RD K N+LLD D KL DFG AK G+ S + +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----Y 188
Query: 252 CAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
APE T+ DV+S G V E++ G+ +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G FG + + +N+ VAVK ++R G + + E++ L +P +V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY G L + + N + G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQ---VCH 138
Query: 207 RDFKASNVLLDQDFNPKLS--DFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
RD K N LLD P+L FG +K + + +GT Y APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVLLKKEYDG 195
Query: 265 K-SDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
K +DV+S GV ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNP 136
++ ++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 137 YLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
Y G D LV +Y+P + H ++ L + R L
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR---AKQTLPVIYVKLYMYQLFRSLA 137
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGY 251
Y+H + +RD K N+LLD D KL DFG AK G+ S + +R Y
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----Y 189
Query: 252 CAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
APE T+ DV+S G V E++ G+ +
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 41 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 100
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 161 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 239 SHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRVI 285
S + +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 215 SXICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
++ ++G G FG VY+ KL + + VA+K++ ++ NRE + + L + +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNI 75
Query: 139 VNLVGYCVDGDQRI------LVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAA 190
V L + ++ LV +Y+P + H + M +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLF 132
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMG 247
R L Y+H + +RD K N+LLD D KL DFG AK G+ S + +R
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 248 TYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
Y APE T+ DV+S G V E++ G+ +
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNPYLVNLVG 143
++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++ Y G
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 105
Query: 144 YCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
D LV +Y+P + H + M + R L Y+H
Sbjct: 106 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLAYIHSFG- 161
Query: 202 PPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGYCAPEYAL 258
+ +RD K N+LLD D KL DFG AK G+ S + +R Y APE
Sbjct: 162 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 214
Query: 259 -TGQLTAKSDVYSFGVVFLEIITGRRV 284
T+ DV+S G V E++ G+ +
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPI 241
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNPYLVNLVG 143
++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++ Y G
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 94
Query: 144 YCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
D LV +Y+P + H + M + R L Y+H
Sbjct: 95 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLAYIHSFG- 150
Query: 202 PPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGYCAPEYAL 258
+ +RD K N+LLD D KL DFG AK G+ S + +R Y APE
Sbjct: 151 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 203
Query: 259 -TGQLTAKSDVYSFGVVFLEIITGRRV 284
T+ DV+S G V E++ G+ +
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPI 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 22/166 (13%)
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RVMG 247
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKD 306
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 306
Query: 307 RRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 307 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 345
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV--EVLMLSMLSNPYLVNLVG 143
++G G FG VY+ KL + + VA+K++ ++ NRE + ++ +++ Y G
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG 98
Query: 144 YCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQ 201
D LV +Y+P + H + M + R L Y+H
Sbjct: 99 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM---YQLFRSLAYIHSFG- 154
Query: 202 PPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTYGYCAPEYAL 258
+ +RD K N+LLD D KL DFG AK G+ S + +R Y APE
Sbjct: 155 --ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELIF 207
Query: 259 -TGQLTAKSDVYSFGVVFLEIITGRRV 284
T+ DV+S G V E++ G+ +
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPI 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHV---STRV 245
ARG+E+L I+RD A N+LL ++ K+ DFGLA+ + +V TR+
Sbjct: 208 VARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLAR-DIYKNPDYVRKGDTRL 263
Query: 246 MGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE + KSDV+S+GV+ EI +
Sbjct: 264 --PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 32/213 (15%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREF------LVEVLMLSML----SN 135
LLG+GGFG V+ G VA+K + RN G +EV +L + +
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 136 PYLVNLVGYCVDGDQRILVYEY-MPNGSLEDHLLDLPP----NRKALDWNTRMKIAHGAA 190
P ++ L+ + + +LV E +P L D++ + P + I H +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 191 RGLEYLHESAQPPVIYRDFKASNVLLD-QDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
RG V++RD K N+L+D + KL DFG L D+ + T GT
Sbjct: 158 RG-----------VVHRDIKDENILIDLRRGCAKLIDFGSGAL--LHDEPY--TDFDGTR 202
Query: 250 GYCAPEYALTGQLTA-KSDVYSFGVVFLEIITG 281
Y PE+ Q A + V+S G++ +++ G
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 22/166 (13%)
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RVMG 247
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKD 306
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 308
Query: 307 RRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 309 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 347
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RVMG 247
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT 280
+ APE T +SDV+SFGV+ EI +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N+ LLD++ K+ DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 24/207 (11%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPY-LVNLVGYC 145
+G G FG +Y G TN++VA+K N + + L E + +L + N+ +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKIYRILQGGTGIPNVRWFG 72
Query: 146 VDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVI 205
V+GD +LV + + SLED L + + L T + +A +E++H + +
Sbjct: 73 VEGDYNVLVMDLL-GPSLED-LFNF--CSRKLSLKTVLMLADQMINRVEFVHSKS---FL 125
Query: 206 YRDFKASNVLL------DQDFNPKLSDFGLA-KLGPTGDKSHVSTR----VMGTYGYCAP 254
+RD K N L+ +Q + + DFGLA K T H+ R + GT Y +
Sbjct: 126 HRDIKPDNFLMGLGRRANQVY---IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV 182
Query: 255 EYALTGQLTAKSDVYSFGVVFLEIITG 281
L + + + D+ S G V + + G
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 29/227 (12%)
Query: 76 VATTNFNPD----------NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV 125
VAT PD ++G G FG VY+ KL + + VA+K++ ++ NRE +
Sbjct: 11 VATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI 70
Query: 126 --EVLMLSMLSNPYLVNLVGYCVDGDQRILVYEYMPNG--SLEDHLLDLPPNRKALDWNT 181
++ +++ Y G D LV +Y+P + H +
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 182 RMKIAHGAARGLEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK-- 238
M + R L Y+H + +RD K N+LLD D KL DFG AK G+
Sbjct: 131 YM---YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 184
Query: 239 SHVSTRVMGTYGYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
S + +R Y APE T+ DV+S G V E++ G+ +
Sbjct: 185 SXICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 22/166 (13%)
Query: 189 AARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVST-RVMG 247
A+G+E+L A I+RD A N+LL + K+ DFGLA+ D +V
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 248 TYGYCAPEYALTGQLTAKSDVYSFGVVFLEIIT-GRRVIDNSRPTEEQNLVTWATPLFKD 306
+ APE T +SDV+SFGV+ EI + G + EE +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FCRR 315
Query: 307 RRKFTMMADPLLEGNYPIKGLYQALAVAAMCLQEEAGTRPMMSDVV 352
++ T M P +Y +YQ + C E RP S++V
Sbjct: 316 LKEGTRMRAP----DYTTPEMYQTMLD---CWHGEPSQRPTFSELV 354
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYL 138
++ ++G G FG VY+ KL + + VA+K++ + NRE + + L + +
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNI 75
Query: 139 VNLVGYCVDGDQRI------LVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARG 192
V L + ++ LV +Y+P ++ ++ L + R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNP-KLSDFGLAKLGPTGDK--SHVSTRVMGTY 249
L Y+H + +RD K N+LLD D KL DFG AK G+ S + +R
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 250 GYCAPEYAL-TGQLTAKSDVYSFGVVFLEIITGRRV 284
Y APE T+ DV+S G V E++ G+ +
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 16/213 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYCV 146
+G G FG + + +N+ VAVK ++R G + + E++ L +P +V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 147 DGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIY 206
+V EY G L + + N + G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQ---VCH 138
Query: 207 RDFKASNVLLDQDFNPKLS--DFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTA 264
RD K N LLD P+L FG +K + +GT Y APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKDTVGTPAYIAPEVLLKKEYDG 195
Query: 265 K-SDVYSFGVVFLEIITGRRVIDNSRPTEEQNL 296
K +DV+S GV ++ G ++ P E +N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNF 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQL----DRNGFQGNREFLVEVLMLSMLSNPYLVNLV 142
LGEG +G VY+ TN+ VA+K++ + G G + EV +L L + ++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIELK 99
Query: 143 GYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWN--TRMKIA----HGAARGLEYL 196
+ L++EY N DL +K +D N M++ + G+ +
Sbjct: 100 SVIHHNHRLHLIFEYAEN--------DL---KKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 197 HESAQPPVIYRDFKASNVLL---DQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
H ++RD K N+LL D P K+ DFGLA+ G T + T Y
Sbjct: 149 HSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQFTHEIITLWY 203
Query: 252 CAPEYALTGQLTAKS-DVYSFGVVFLEII 279
PE L + + S D++S ++ E++
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N+ LLD++ K+ DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 85 NLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGF-----QGNREFLVEVLMLSMLSNPYLV 139
++LG+G V+RG+ + T A+K + F REF V L L++ +V
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV----LKKLNHKNIV 70
Query: 140 NLVGYCVDGDQR--ILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLH 197
L + R +L+ E+ P GSL +L+ P N L + + + G+ +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 198 ESAQPPVIYRDFKASNVL--LDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCA 253
E+ +++R+ K N++ + +D KL+DFG A+ D+ V + GT Y
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-ELEDDEQFVX--LYGTEEYLH 183
Query: 254 PEYALTGQLT--------AKSDVYSFGVVFLEIITG 281
P+ L A D++S GV F TG
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 132
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 133 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 187
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N+ LLD++ K+ DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 132
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 133 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 187
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N+ LLD++ K+ DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 17/210 (8%)
Query: 78 TTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV---EVLMLSMLS 134
+ N++ LG+G F V R + T + A K ++ R+F E + L
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 62
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P +V L + LV++ + G L + ++ A ++ + +H + LE
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-------AREFYSEADASHCIQQILE 115
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ +++R+ K N+LL KL+DFGLA + H GT GY
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 172
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+PE + D+++ GV+ ++ G
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 17/210 (8%)
Query: 78 TTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV---EVLMLSMLS 134
+ N++ LG+G F V R + T + A K ++ R+F E + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 63
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P +V L + LV++ + G L + ++ A ++ + +H + LE
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-------AREFYSEADASHCIQQILE 116
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ +++R+ K N+LL KL+DFGLA + H GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+PE + D+++ GV+ ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 34/211 (16%)
Query: 86 LLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGYC 145
++G+G FG+V + +Q VA+K + RN + +R+ E+ +L L
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQ--------- 153
Query: 146 VDGDQRILVYEYMPNGSLEDH-----------LLDLPPNRKALDWNTRM--KIAHGAARG 192
D D + V + N + +H L +L K ++ + K AH +
Sbjct: 154 -DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFNP--KLSDFGLAKLGPTGDKSHVSTRVMGTYG 250
L+ LH++ +I+ D K N+LL Q K+ DFG + + V + +
Sbjct: 213 LDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYXXIQSRF- 264
Query: 251 YCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
Y APE L + D++S G + E++TG
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 17/210 (8%)
Query: 78 TTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNREFLV---EVLMLSMLS 134
+ N++ LG+G F V R + T + A K ++ R+F E + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 63
Query: 135 NPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLE 194
+P +V L + LV++ + G L + ++ A ++ + +H + LE
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-------AREFYSEADASHCIQQILE 116
Query: 195 YLHESAQPPVIYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGY 251
+ +++R+ K N+LL KL+DFGLA + H GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 252 CAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+PE + D+++ GV+ ++ G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 21/212 (9%)
Query: 78 TTNFNPDNLLGEGGFGRVYR-----GKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSM 132
+ N++ LG+G F V R LE + + K+L FQ + E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 133 LSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARG 192
L +P +V L + LV++ + G L + ++ A ++ + +H +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-------AREFYSEADASHCIQQI 137
Query: 193 LEYLHESAQPPVIYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
LE + +++R+ K N+LL KL+DFGLA + H GT
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 194
Query: 250 GYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
GY +PE + D+++ GV+ ++ G
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQG--NREFLVEVLMLSMLSNPYLVNLVGY 144
+G+G F V R T + A K ++ +++ E + +L + +V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ LV++ + G L + ++ A ++ + +H + LE + Q V
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCHQMGV 124
Query: 205 IYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++RD K N+LL KL+DFGLA + GD+ GT GY +PE
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQ-AWFGFAGTPGYLSPEVLRKEA 182
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D+++ GV+ ++ G
Sbjct: 183 YGKPVDIWACGVILYILLVG 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N+ LLD++ K+ DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T A K + + + +R + EV +L + +P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + IL+ E + G L D L + +++L + G+ YLH S
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH-SL 133
Query: 201 QPPVIYRDFKASNVLLDQDFNPK----LSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
Q + + D K N++L PK + DFGLA G++ + GT + APE
Sbjct: 134 Q--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 87 LGEGGFGRVYR--GKLEGTNQDVAVKQLDRNGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
LG+G F V R L G + + + +++ E + +L +P +V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+ L+++ + G L + ++ A ++ + +H + LE + Q V
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIV-------AREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 205 IYRDFKASNVLLDQDFN---PKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQ 261
++R+ K N+LL KL+DFGLA + G++ GT GY +PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQ-AWFGFAGTPGYLSPEVLRKDP 189
Query: 262 LTAKSDVYSFGVVFLEIITG 281
D+++ GV+ ++ G
Sbjct: 190 YGKPVDLWACGVILYILLVG 209
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T + A K + + + +R E EV +L + + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L +++L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ + KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T + A K + + + +R E EV +L + + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L +++L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ + KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T + A K + + + +R E EV +L + + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L +++L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ + KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T + A K + + + +R E EV +L + + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L +++L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ + KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNR------EFLVEVLMLSMLSNPYLVN 140
LG G F V + + + T + A K + + + +R E EV +L + + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 141 LVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESA 200
L + +L+ E + G L D L +++L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 QPPVIYRDFKASNV-LLDQDF---NPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEY 256
+ + D K N+ LLD++ + KL DFGLA G + + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEI 189
Query: 257 ALTGQLTAKSDVYSFGVVFLEIITG 281
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 190 ARGLEYLHESAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTY 249
A +E+LH +++RD K SN+ D K+ DFGL ++ M Y
Sbjct: 174 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 250 G----------YCAPEYALTGQLTAKSDVYSFGVVFLEII 279
Y +PE + K D++S G++ E++
Sbjct: 231 ATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 79 TNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGNRE-FLVEVLMLSMLSNPY 137
T+F P +G GGFG V+ K + + + A+K++ + RE + EV L+ L +P
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 138 LV 139
+V
Sbjct: 66 IV 67
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR--NGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG FG ++ G NQ VA+K R + Q E+ L+ P N+ +
Sbjct: 17 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP---NVYYF 73
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+G +LV + + SLED LLDL + ++ +A A + L + + +
Sbjct: 74 GQEGLHNVLVIDLL-GPSLED-LLDLCGRKFSVK-----TVAMAAKQMLARVQSIHEKSL 126
Query: 205 IYRDFKASNVLLDQDFNPK------LSDFGLAKL--GPTGDKSHVSTR----VMGTYGYC 252
+YRD K N L+ + N K + DFG+ K P K H+ R + GT Y
Sbjct: 127 VYRDIKPDNFLIGRP-NSKNANMIYVVDFGMVKFYRDPV-TKQHIPYREKKNLSGTARYM 184
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ L + + + D+ + G VF+ + G
Sbjct: 185 SINTHLGREQSRRDDLEALGHVFMYFLRG 213
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDR--NGFQGNREFLVEVLMLSMLSNPYLVNLVGY 144
+GEG FG ++ G NQ VA+K R + Q E+ L+ P N+ +
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP---NVYYF 74
Query: 145 CVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPV 204
+G +LV + + SLED LLDL + ++ +A A + L + + +
Sbjct: 75 GQEGLHNVLVIDLL-GPSLED-LLDLCGRKFSVK-----TVAMAAKQMLARVQSIHEKSL 127
Query: 205 IYRDFKASNVLLDQDFNPK------LSDFGLAKL--GPTGDKSHVSTR----VMGTYGYC 252
+YRD K N L+ + N K + DFG+ K P K H+ R + GT Y
Sbjct: 128 VYRDIKPDNFLIGRP-NSKNANMIYVVDFGMVKFYRDPV-TKQHIPYREKKNLSGTARYM 185
Query: 253 APEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ L + + + D+ + G VF+ + G
Sbjct: 186 SINTHLGREQSRRDDLEALGHVFMYFLRG 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 206 YRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAK 265
+RD K N+L+ D L DFG+A T +K +GT Y APE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 266 SDVYSFGVVFLEIITG 281
+D+Y+ V E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 40/245 (16%)
Query: 104 NQDVAVKQLDRNGFQGNREFL------VEVLMLSMLSNPY--LVNLVGYCVDGDQRILVY 155
N VA+K ++++ E +EV++L +S+ + ++ L+ + D +L+
Sbjct: 76 NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 135
Query: 156 EYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHESAQPPVIYRDFKASNVL 215
E ++D L D R AL + + H V++RD K N+L
Sbjct: 136 ER--PEPVQD-LFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENIL 189
Query: 216 LDQDFNP-KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTAKSD-VYSFGV 273
+D + KL DFG L K V T GT Y PE+ + +S V+S G+
Sbjct: 190 IDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 274 VFL-------------EIITGRRVIDNSRPTEEQNLVTWAT-------PLFKDRRKFTMM 313
+ EII G+ +E Q+L+ W P F++ + M
Sbjct: 246 LLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
Query: 314 ADPLL 318
D LL
Sbjct: 306 QDVLL 310
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 18/202 (8%)
Query: 87 LGEGGFGRVYRGKLEGTNQDVAVKQLDRNGFQGN--------REFLVEVLMLSMLSNPYL 138
LG G FG V+ + N++V VK + + + + +E+ +LS + + +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 139 VNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAARGLEYLHE 198
+ ++ + LV E +G +D P LD I + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRL 148
Query: 199 SAQPPVIYRDFKASNVLLDQDFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAL 258
+I+RD K N+++ +DF KL DFG A G + GT YCAPE +
Sbjct: 149 KD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLM 202
Query: 259 TGQLTAKS-DVYSFGVVFLEII 279
+++S GV ++
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLV 224
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 74 LCVATTNFNPDNLLGEGGFGRVYRGKLEGTNQDVAVK--QLDRNGFQGNREFLVEVLMLS 131
+ + NF +G G FG + GK TN+ VA+K + Q + E+ + S
Sbjct: 4 VLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGS 63
Query: 132 MLSNPYLVNLVGYCVDGDQRILVYEYMPNGSLEDHLLDLPPNRKALDWNTRMKIAHGAAR 191
P V G C G +V E + SLED L DL + T + IA
Sbjct: 64 GDGIPQ-VYYFGPC--GKYNAMVLELL-GPSLED-LFDL--CDRTFSLKTVLMIAIQLIS 116
Query: 192 GLEYLHESAQPPVIYRDFKASNVLLDQDFNP-----KLSDFGLAK--LGPTGDKSHVSTR 244
+EY+H +IYRD K N L+ + N + DFGLAK + P K H+ R
Sbjct: 117 RMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE-TKKHIPYR 172
Query: 245 ----VMGTYGYCAPEYALTGQLTAKSDVYSFGVVFLEIITG 281
+ GT Y + L + + + D+ + G +F+ + G
Sbjct: 173 EHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,175,760
Number of Sequences: 62578
Number of extensions: 514709
Number of successful extensions: 3793
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 1083
Number of HSP's gapped (non-prelim): 1151
length of query: 399
length of database: 14,973,337
effective HSP length: 101
effective length of query: 298
effective length of database: 8,652,959
effective search space: 2578581782
effective search space used: 2578581782
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)