Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>046610
MVEPDGSGEISTGHQRLSYGRQRSNIPSQQRTCGRTSKTTMLDDSISTKRTQLISDFEVT
QAISEIQNSLIEGNNLHDNLSSANHLPTTPDIRNYPTSWASDKGWEAADDSEDETVYLPN
TNEDDEELQRSWFRRALEVQAIRDGIKLCKMDNTSTCISCECSDLSCDWKITTMKEHATK
MFIISYITPVHKCTKRLSKLKWGTKWITAKFLHKWKQNPHQQLHVLGNEIAATYGIKCPI
WKLKAIDTTARMWLGLDHGEGYAQLLQYREEMEMINSHNIIIIETSTKQQSSDEIFDCMF
VFLYDTAYAFKTRCRMLLTVDGWEIDGPYKSVMLIAVCRDRNDVVLPVAFCEVQEENLDS
WAFFLKNVNDGLRLERGKGLCILGDGDNGIDEAVEEFLPYAVYRQCCFSLY

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046610
        (411 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197122 - symbol:AT1G49920 "AT1G49920" species...   137  4.4e-06   2


>TAIR|locus:2197122 [details] [associations]
            symbol:AT1G49920 "AT1G49920" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 InterPro:IPR018289
            Pfam:PF10551 Pfam:PF03108 EMBL:AC074110 IPI:IPI00531525
            RefSeq:NP_175414.1 UniGene:At.52103 EnsemblPlants:AT1G49920.1
            GeneID:841415 KEGG:ath:AT1G49920 TAIR:At1g49920 eggNOG:NOG303426
            HOGENOM:HOG000152182 InParanoid:Q9C702 OMA:ISESHTC PhylomeDB:Q9C702
            ProtClustDB:CLSN2682695 Genevestigator:Q9C702 Uniprot:Q9C702
        Length = 785

 Score = 137 (53.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
 Identities = 37/147 (25%), Positives = 71/147 (48%)

Query:   272 MEMINSHNIIIIETSTKQQSSDE---IFDCMFVFLYDTAYAFKTRCRMLLTVDGWEIDGP 328
             M +++S N ++++      + D     F  +F     +   F+  CR L+ VD   + G 
Sbjct:   334 MSVLHSSNGLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQ-HCRPLIVVDTKNLGGK 392

Query:   329 YKSVMLIAVCRDRNDVVLPVAFCEVQEENLDSWAFFLKNVNDGLRLERGKGLCILGDGDN 388
             YK  ++IA   D  +   P+AF   +E ++DSW +FL  + +  ++ + +G+C++   D 
Sbjct:   393 YKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIRE--KVTQRQGICLISSPDP 450

Query:   389 GIDEAVEE-----FLPYAVYRQCCFSL 410
              I   + E       P+A +R C + L
Sbjct:   451 DILAVINEPGSQWKEPWAYHRFCLYHL 477

 Score = 48 (22.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query:   161 ECSDLSCDWKITTMKEHATKMFIISYITPVHKC 193
             EC    C W I   +     +F I+  +  H C
Sbjct:   220 ECERWHCKWSICASRREEDGLFEITECSGPHDC 252


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      411       411   0.00080  118 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  314 KB (2160 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.85u 0.19s 36.04t   Elapsed:  00:00:02
  Total cpu time:  35.85u 0.19s 36.04t   Elapsed:  00:00:02
  Start:  Mon May 20 20:08:18 2013   End:  Mon May 20 20:08:20 2013

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