BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046612
(223 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 273 bits (699), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 158/224 (70%), Gaps = 1/224 (0%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI DRS GD+AS YH YKED++LMK +G+D++RFSISWTRILP G + GGVN G+K+Y
Sbjct: 73 KIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYY 132
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+LINELL+ ++PF+TL H+D PQALE++Y GFLSP I+ DF DY + CFK +GDRVK
Sbjct: 133 NNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKN 192
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYV-GNCTAGDSATEPYIAAHNMLLSHGALVNLY 179
W + NEP NGY G FAPGRCS + GNC+ GDS EPY A H+ LL+H V LY
Sbjct: 193 WITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLY 252
Query: 180 KHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
K KYQ Q GKIGIT+++HWF P ++ DF FGW
Sbjct: 253 KAKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGW 296
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 256 bits (654), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 159/224 (70%), Gaps = 1/224 (0%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI DR+ GD+A YH YKEDI +MK + LD++RFSISW R+LPKGK+SGGVN G+ +Y
Sbjct: 58 KIKDRTNGDVAIDEYHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYY 117
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+LINE+LAN ++P+VTL H+D PQALE+EY GFL IV DF DY + CFK +GDRVK
Sbjct: 118 NNLINEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKH 177
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHNMLLSHGALVNLY 179
W ++NEP G+ MN Y G+FAPGRCS+++ NCT GDS EPY+AAH LL+H A LY
Sbjct: 178 WITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLY 237
Query: 180 KHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
K KYQ Q G IGIT+++HWFEP K DF GW
Sbjct: 238 KTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGW 281
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 148/223 (66%), Gaps = 4/223 (1%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI D S G+ A YH YKEDIK+MK+ GL+S+RFSISW+R+LP G+++ GVN GVKFY
Sbjct: 82 KISDGSNGNQAINCYHMYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFY 141
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
D I+ELLAN IKP VTL H+D PQALE+EYGGFLS +IV DF +Y +FCF +GD++K
Sbjct: 142 HDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKY 201
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP+ +NGY G FAPGR G GD A EPY+ HN+LL+H A V Y+
Sbjct: 202 WTTFNEPHTFAVNGYALGEFAPGRG----GKGDEGDPAIEPYVVTHNILLAHKAAVEEYR 257
Query: 181 HKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+K+Q Q G+IGI + + W EP DF GW
Sbjct: 258 NKFQKCQEGEIGIVLNSMWMEPLSDVQADIDAQKRALDFMLGW 300
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 150/237 (63%), Gaps = 19/237 (8%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
+ GD+A YH YKED+ ++K +GLD++RFSISW+R+LP G++SGGVN G+ +Y +LI+
Sbjct: 66 TNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLID 125
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LLAN IKPFVTL H+D PQALE+EYGGFLSP+IV DF +Y + CF +GDRVK W ++N
Sbjct: 126 GLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLN 185
Query: 126 EPNGMVMNGYNGGSFAPG----------------RCSNYVGN--CTAGDSATEPYIAAHN 167
EP ++GY G +APG RCS C+ G+ TEPY H+
Sbjct: 186 EPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHH 245
Query: 168 MLLSHGALVNLYKHKYQPYQMGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGW 223
+LL+H A V LYK+K+Q Q G+IGI+ T W EP + DF GW
Sbjct: 246 LLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGW 302
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 214 bits (546), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 143/224 (63%), Gaps = 3/224 (1%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI D S D+A YH ++EDI+LM +G+D++RFSI+W+RI P G G VN G+ Y
Sbjct: 55 KITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNG--VGQVNQAGIDHY 112
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
LI+ LLA I+P+VTL H+D PQALE++Y G+L +IV DF Y + CF+ +GDRVK
Sbjct: 113 NKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKH 172
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHNMLLSHGALVNLY 179
W ++NEP+ + + GY+ G APGRCS + C AG+S TEPY+ AH+ +L+H A ++Y
Sbjct: 173 WITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIY 232
Query: 180 KHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+ KY+ Q G++GI WFEP T +F GW
Sbjct: 233 RTKYKATQNGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGW 276
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 214 bits (546), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/237 (47%), Positives = 150/237 (63%), Gaps = 19/237 (8%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
+ GD+A YH YKED+ ++K +GLD++RFSISW+R+LP G++SGGVN G+ +Y +LI+
Sbjct: 66 TNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLID 125
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LLAN IKPFVTL H+D PQALE+EYGGFLSP+IV DF +Y + CF +GDRVK W ++N
Sbjct: 126 GLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLN 185
Query: 126 EPNGMVMNGYNGGSFAPG----------------RCSNYVGN--CTAGDSATEPYIAAHN 167
EP ++GY G +APG RCS C+ G+ TEPY H+
Sbjct: 186 EPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHH 245
Query: 168 MLLSHGALVNLYKHKYQPYQMGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGW 223
+LL+H A V LYK+K+Q Q G+IGI+ T W EP + DF GW
Sbjct: 246 LLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGW 302
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 213 bits (543), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 150/237 (63%), Gaps = 19/237 (8%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
+ GD+A YH YKED+ ++K +GLD++RFSISW+R+LP G++SGGVN G+ +Y +LI+
Sbjct: 66 TNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLID 125
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LLAN IKPFVTL H+D PQALE+EYGGFLSP+IV DF +Y + CF +GDRVK W ++N
Sbjct: 126 GLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLN 185
Query: 126 EPNGMVMNGYNGGSFAPG----------------RCSNYVGN--CTAGDSATEPYIAAHN 167
+P ++GY G +APG RCS C+ G+ TEPY H+
Sbjct: 186 QPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHH 245
Query: 168 MLLSHGALVNLYKHKYQPYQMGKIGITILTHWFEP-KFKTXXXXXXXXXXXDFFFGW 223
+LL+H A V LYK+K+Q Q G+IGI+ T W EP + DF GW
Sbjct: 246 LLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGW 302
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
EP + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 EPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 211 bits (537), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 6 STGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLIN 65
GD+A+ YH YKED+ LMK + D++RFSISW+RI P G+ G VN GV +Y +LIN
Sbjct: 63 QNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGE--GRVNQEGVAYYNNLIN 120
Query: 66 ELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMN 125
LL I P+V L H+D P ALE++YGG+L+ K+ F +Y DFCFKT+G+RVK W + N
Sbjct: 121 YLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFN 180
Query: 126 EPNGMVMNGYNGGSFAPGRCSNYVGNCTA-GDSATEPYIAAHNMLLSHGALVNLYKHKYQ 184
+P + + GY+ G+ P RC+ C A G+SATEPYI AHN LLSH A V Y+ KYQ
Sbjct: 181 QPRIVALLGYDQGTNPPKRCT----KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQ 236
Query: 185 PYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
Q GK+GI + +W+E + DF GW
Sbjct: 237 AAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGW 275
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 137/223 (61%), Gaps = 2/223 (0%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I DRS GD+A+ YH Y ED++L+K++G+D++RFSISW RILPKG ++GG+N GV++Y
Sbjct: 116 IVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYN 175
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
LI+ LL N I+P++T+ H+D PQAL E YGGFL +I+KD+ D+ CF+ +G VK W
Sbjct: 176 KLIDLLLENGIEPYITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNW 235
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT-AGDSATEPYIAAHNMLLSHGALVNLYK 180
+ N+P Y G APGRCS V G+S +EPYI AHN+L +H V++Y
Sbjct: 236 LTFNDPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY- 294
Query: 181 HKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+KY G+IG+ + P T D GW
Sbjct: 295 NKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGW 337
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 200 bits (508), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 137/223 (61%), Gaps = 2/223 (0%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I DRS GD+A+ YH Y ED++L+K++G+D++RFSISW RILPKG ++GG+N V++Y
Sbjct: 116 IVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYN 175
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
LI+ LL N I+P++T+ H+D PQAL + YGGFL +I+KD+ D+ CF+ +G +VK W
Sbjct: 176 KLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNW 235
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT-AGDSATEPYIAAHNMLLSHGALVNLYK 180
+ NEP Y G APGRCS V G+S +EPYI AHN+L +H V++Y
Sbjct: 236 LTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY- 294
Query: 181 HKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+KY G+IG+ + P T D GW
Sbjct: 295 NKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGW 337
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 2/223 (0%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I DRS GD+A+ YH Y ED++L+K++G+D++RFSISW RILPKG ++GG+N V++Y
Sbjct: 116 IVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYN 175
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
LI+ LL N I+P++T+ H+D PQAL + YGGFL +I+KD+ D+ CF+ +G VK W
Sbjct: 176 KLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNW 235
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT-AGDSATEPYIAAHNMLLSHGALVNLYK 180
+ NEP Y G APGRCS V G+S +EPYI AHN+L +H V++Y
Sbjct: 236 LTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY- 294
Query: 181 HKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+KY G+IG+ + P T D GW
Sbjct: 295 NKYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGW 337
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 138/222 (62%), Gaps = 3/222 (1%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDL 63
D GD + ++++DI ++ ++ +RFSI+W+RI+P+GK S GVN G+ +Y L
Sbjct: 63 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGL 122
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
I+ L+ I PFVTL H+D PQ L++EY GFL P+I+ DF DY D CF+ +GD VK W +
Sbjct: 123 ISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 182
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHNMLLSHGALVNLYKHK 182
+N+ + GY APGRCS V +C AG+S+TEPYI AH+ LL+H +V+LY+
Sbjct: 183 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 242
Query: 183 YQPYQMGKIGITILTHWFEPKFKTXX-XXXXXXXXXDFFFGW 223
Y +Q GKIG T++T WF P T +FF GW
Sbjct: 243 YT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGW 283
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 197 bits (500), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 138/222 (62%), Gaps = 3/222 (1%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDL 63
D GD + ++++DI ++ ++ +RFSI+W+RI+P+GK S GVN G+ +Y L
Sbjct: 65 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGL 124
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
I+ L+ I PFVTL H+D PQ L++EY GFL P+I+ DF DY D CF+ +GD VK W +
Sbjct: 125 ISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 184
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHNMLLSHGALVNLYKHK 182
+N+ + GY APGRCS V +C AG+S+TEPYI AH+ LL+H +V+LY+
Sbjct: 185 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 244
Query: 183 YQPYQMGKIGITILTHWFEPKFKTXX-XXXXXXXXXDFFFGW 223
Y +Q GKIG T++T WF P T +FF GW
Sbjct: 245 YT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGW 285
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 196 bits (499), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 137/222 (61%), Gaps = 3/222 (1%)
Query: 4 DRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDL 63
D GD + ++++DI ++ ++ +RFSI+W+RI+P+GK S GVN G+ +Y L
Sbjct: 65 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGL 124
Query: 64 INELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWAS 123
I+ L+ I PFVTL H+D PQ L++EY GFL P+I+ DF DY D CF+ +GD VK W +
Sbjct: 125 IDGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 184
Query: 124 MNEPNGMVMNGYNGGSFAPGRCSNYVG-NCTAGDSATEPYIAAHNMLLSHGALVNLYKHK 182
+N+ + GY APGRCS V +C AG+S+TEPYI AH+ LL+H +V+LY+
Sbjct: 185 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 244
Query: 183 YQPYQMGKIGITILTHWFEPKFKTXX-XXXXXXXXXDFFFGW 223
Y +Q GKIG T++T WF P T FF GW
Sbjct: 245 YT-HQGGKIGPTMITRWFLPYNDTDRHSIAATERMKQFFLGW 285
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 127/189 (67%), Gaps = 6/189 (3%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 63 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 122
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
++LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 123 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHNMLLSHGAL 175
VK W + NEP Y G FAPGRCS + +C G+S EPY A HN+LL+H
Sbjct: 183 VKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 241
Query: 176 VNLYKHKYQ 184
V+LY Y+
Sbjct: 242 VDLYNKHYK 250
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 194 bits (493), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 127/189 (67%), Gaps = 6/189 (3%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 58 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 117
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
++LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 118 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 177
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHNMLLSHGAL 175
VK W + NEP Y G FAPGRCS + +C G+S EPY A HN+LL+H
Sbjct: 178 VKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 236
Query: 176 VNLYKHKYQ 184
V+LY Y+
Sbjct: 237 VDLYNKHYK 245
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 194 bits (493), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 5/225 (2%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D + GD+A+ YH Y+ED+K +K +G+ +RFSISW+RILP G +G VN G+ +Y
Sbjct: 113 RISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDG--TGKVNQAGIDYY 170
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
LIN L+ NDI P+VT+ H+D PQALE++YGGFL+ +IV D+ + + CFK +GDRVK
Sbjct: 171 NKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKN 230
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTA--GDSATEPYIAAHNMLLSHGALVNL 178
W + NEP+ Y G APGRCS + +C GDS EPY A H++LL+H V L
Sbjct: 231 WFTFNEPHTYCCFSYGEGIHAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQL 289
Query: 179 YKHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+K +Y + KIG+ +EP + D+ GW
Sbjct: 290 FKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGW 334
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 193 bits (491), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 6/189 (3%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 63 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 122
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
++LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 123 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHNMLLSHGAL 175
VK W + N+P Y G FAPGRCS + +C G+S EPY A HN+LL+H
Sbjct: 183 VKNWLTFNDPQTFTSVSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 241
Query: 176 VNLYKHKYQ 184
V+LY Y+
Sbjct: 242 VDLYNKHYK 250
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 193 bits (490), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 6/189 (3%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D S DI + YH YK D++L+K++G+D++RFSISW RILPKG GG+NP G+K+Y
Sbjct: 63 RILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYY 122
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS---PKIVKDFVDYGDFCFKTYGDR 117
++LIN LL N I+P+VT+ H+D PQALEE+YGGFL IV+D+ + CF +GD+
Sbjct: 123 RNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK 182
Query: 118 VKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCT--AGDSATEPYIAAHNMLLSHGAL 175
VK W + N+P Y G FAPGRCS + +C G+S EPY A HN+LL+H
Sbjct: 183 VKNWLTFNDPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEA 241
Query: 176 VNLYKHKYQ 184
V+LY Y+
Sbjct: 242 VDLYNKHYK 250
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 137/225 (60%), Gaps = 5/225 (2%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D + GD+A+ YH Y+ED+K +K +G+ +RFSISW+RILP G +G VN G+ +Y
Sbjct: 113 RISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDG--TGKVNQAGIDYY 170
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
LIN L+ NDI P+VT+ H+D PQALE++YGGFL+ +IV D+ + + CFK +GDRVK
Sbjct: 171 NKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKN 230
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTA--GDSATEPYIAAHNMLLSHGALVNL 178
W + N P+ Y G APGRCS + +C GDS EPY A H++LL+H V L
Sbjct: 231 WFTFNAPHTYCCFSYGEGIHAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQL 289
Query: 179 YKHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+K +Y + KIG+ +EP + D+ GW
Sbjct: 290 FKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGW 334
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 187 bits (476), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 140/223 (62%), Gaps = 12/223 (5%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI D S+GD+A+ Y+ ++ED++L+K G+ ++RFS+SW+RI+PKG S VN G+K Y
Sbjct: 47 KIADGSSGDVATDSYNRWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHY 106
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS-PKIVKDFVDYGDFCFKTYGDRVK 119
+ LI EL+ I PFVTL H+D PQAL++ YGG+L+ + ++DF +Y CF+++GD V+
Sbjct: 107 RTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQ 166
Query: 120 LWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLY 179
W + NEP + + GY G FAPG SN TEP+I +H+++L+H V LY
Sbjct: 167 NWITFNEPWVISVMGYGNGIFAPGHVSN-----------TEPWIVSHHIILAHAHAVKLY 215
Query: 180 KHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFG 222
+ +++ Q G+IGIT+ +HW P T +F G
Sbjct: 216 RDEFKEKQGGQIGITLDSHWLIPYDDTDASKEATLRAMEFKLG 258
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 136/225 (60%), Gaps = 5/225 (2%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
+I D + GD+A+ YH Y+ED+K +K +G+ +RFSISW+RILP G +G N G+ +Y
Sbjct: 113 RISDGTNGDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILPNG--TGKPNQKGIDYY 170
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+LIN L+ + I P+VT+ H+D PQALE++YGGFL +IV D+ + + CF+++GDRVK
Sbjct: 171 NNLINSLIRHGIVPYVTIWHWDTPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKN 230
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTA--GDSATEPYIAAHNMLLSHGALVNL 178
W + NEP+ Y G APGRCS + +C GDS EPY A H++LL+H V L
Sbjct: 231 WFTFNEPHTYCCFSYGEGIHAPGRCSPGL-DCAVPEGDSLREPYTAGHHILLAHAEAVEL 289
Query: 179 YKHKYQPYQMGKIGITILTHWFEPKFKTXXXXXXXXXXXDFFFGW 223
+K Y + KIG+ +EP + D+ GW
Sbjct: 290 FKAHYNKHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGW 334
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 12/202 (5%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++F TGD+A G Y ++ED+K +K++GL +RFS+SW+R+LP G +G +N G+ +Y
Sbjct: 42 RVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-TTGFINQKGIDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+I++LL N + P VTL HFD PQ LE++ GG+LS I++ F Y FCF T+GDRVK
Sbjct: 101 NKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++NE N + + Y+ G F PG G Y AAHN++ +H + Y
Sbjct: 160 WITINEANVLSVMSYDLGMFPPGIPHFGTGG----------YQAAHNLIKAHARSWHSYD 209
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
++ Q G + +++ W EP
Sbjct: 210 SLFRKKQKGMVSLSLFAVWLEP 231
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 12/202 (5%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++F TGD+A G Y ++ED+K +K++GL +RFS+SW+R+LP G +G +N G+ +Y
Sbjct: 42 RVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-TTGFINQKGIDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+I++LL N + P VTL HFD PQ LE++ GG+LS I++ F Y FCF T+GDRVK
Sbjct: 101 NKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++NE N + + Y+ G F PG G Y AAHN++ +H + Y
Sbjct: 160 WITINEANVLSVMSYDLGMFPPGIPHFGTGG----------YQAAHNLIKAHARSWHSYD 209
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
++ Q G + +++ W EP
Sbjct: 210 SLFRKKQKGMVSLSLFAVWLEP 231
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 121/202 (59%), Gaps = 12/202 (5%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++F TGD+A G Y ++ED+K +K++GL +RFS+SW+R+LP G +G +N G+ +Y
Sbjct: 42 RVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDG-TTGFINQKGIDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+I++LL N + P VTL HFD PQ LE++ GG+LS I++ F Y FCF T+GDRVK
Sbjct: 101 NKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++N+ N + + Y+ G F PG G Y AAHN++ +H + Y
Sbjct: 160 WITINQANVLSVMSYDLGMFPPGIPHFGTGG----------YQAAHNLIKAHARSWHSYD 209
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
++ Q G + +++ W EP
Sbjct: 210 SLFRKKQKGMVSLSLFAVWLEP 231
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 117/189 (61%), Gaps = 17/189 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINE 66
GDIA YH YKED++L+K +G+ S+RFSI+W RI PKG G +N G++FY+DLI+E
Sbjct: 50 NGDIACDHYHRYKEDVQLLKSLGIKSYRFSIAWPRIFPKG--FGEINQKGIQFYRDLIDE 107
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
L+ NDI+P +T+ H+D PQ L ++ GG+ +P++ +VDY + F+ +GDRVK W + NE
Sbjct: 108 LIKNDIEPAITIYHWDLPQKL-QDIGGWANPQVADYYVDYANLLFREFGDRVKTWITHNE 166
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPY 186
P GY G APG + +AAHN+LLSH V Y+ +
Sbjct: 167 PWVASYLGYALGVHAPGIKDMKMA-----------LLAAHNILLSHFKAVKAYR---ELE 212
Query: 187 QMGKIGITI 195
Q G+IGIT+
Sbjct: 213 QDGQIGITL 221
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 153 bits (387), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 14/202 (6%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +Y
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
+ NEP M+GY AP + +G+ Y+AAH ++ +H + +LY
Sbjct: 170 LTFNEP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+++ Q GK+GI++ +W EP
Sbjct: 219 QEFRAEQGGKVGISLNINWCEP 240
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 14/202 (6%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +Y
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
+ N+P M+GY AP + +G+ Y+AAH ++ +H + +LY
Sbjct: 170 LTFNDP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+++ Q GK+GI++ +W EP
Sbjct: 219 QEFRAEQGGKVGISLNINWCEP 240
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 14/202 (6%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +Y
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
+ N P M+GY AP + +G+ Y+AAH ++ +H + +LY
Sbjct: 170 LTFNSP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+++ Q GK+GI++ +W EP
Sbjct: 219 QEFRAEQGGKVGISLNINWCEP 240
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 14/202 (6%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
+ D +TGDIA YH YKED+K++K++G +RFSISW R+LP+G VN G+ +Y
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINELLAN I+P VT+ H+D PQAL ++ GG+ + + K +Y FK +GDRVKLW
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQAL-QDLGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 122 ASMNEPNGMVMNGYNGG-SFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
+ N P M+GY AP + +G+ Y+AAH ++ +H + +LY
Sbjct: 170 LTFNAP-LTFMDGYASEIGMAPSINTPGIGD----------YLAAHTVIHAHARIYHLYD 218
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+++ Q GK+GI++ +W EP
Sbjct: 219 QEFRAEQGGKVGISLNINWCEP 240
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 17/189 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINE 66
TGD+A Y+ +KEDI++++K+G+ ++RFSISW RILP+G +G VN G+ FY +I+
Sbjct: 57 TGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDT 114
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
LL I PFVT+ H+D P AL+ + GG L+ +I F +Y F+ +GDRVK W + NE
Sbjct: 115 LLEKGITPFVTIFHWDLPFALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNE 173
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPY 186
P + GY G+FAPGR S +EP+ HN+L++HG V +++ +
Sbjct: 174 PLCSAIPGYGSGTFAPGR-----------QSTSEPWTVGHNILVAHGRAVKVFR---ETV 219
Query: 187 QMGKIGITI 195
+ GKIGI +
Sbjct: 220 KDGKIGIVL 228
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 13/202 (6%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I D + GDIA YH YKED+ ++K + L +RFSISW RI P G + + P G+ +Y
Sbjct: 45 IKDGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAPSG-VMNSLEPKGIAYYN 103
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
+LINEL+ NDI P VT+ H+D PQ L ++ GG+++P + F +Y F +GDRVK W
Sbjct: 104 NLINELIKNDIIPLVTMYHWDLPQYL-QDLGGWVNPIMSDYFKEYARVLFTYFGDRVKWW 162
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKH 181
+ NEP V GY+ ++AP G+ Y+A H L++HG LY+
Sbjct: 163 ITFNEPIA-VCKGYSIKAYAPNLNLKTTGH----------YLAGHTQLIAHGKAYRLYEE 211
Query: 182 KYQPYQMGKIGITILTHWFEPK 203
++P Q GKI I+I +F PK
Sbjct: 212 MFKPTQNGKISISISGVFFMPK 233
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 17/195 (8%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI + TGDIA YH Y+EDI+LMK++G+ S+RFS SW RILP+GK G VN G+ FY
Sbjct: 51 KIENGDTGDIACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEGK--GRVNQKGLDFY 108
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
K L++ LL +I+P +TL H+D PQAL+++ GG+ + K F +Y F+ + V L
Sbjct: 109 KRLVDNLLKANIRPMITLYHWDLPQALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDL 167
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP + G+ G+ APG D T + AH++LLSHG V++++
Sbjct: 168 WVTHNEPWVVAFEGHAFGNHAPG----------TKDFKTALQV-AHHLLLSHGMAVDIFR 216
Query: 181 HKYQPYQMGKIGITI 195
+ P G+IGIT+
Sbjct: 217 EEDLP---GEIGITL 228
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 14/197 (7%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI D S+G A Y+ EDI L+K +G S+RFSISW+RI+P+G VN G+ Y
Sbjct: 47 KIADGSSGVTACDSYNRTAEDIALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHY 106
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLS-PKIVKDFVDYGDFCFKTYGDRVK 119
+++LL I PF+TL H+D P+ L + YGG L+ + DF +Y F+ +V+
Sbjct: 107 VKFVDDLLDAGITPFITLFHWDLPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVR 165
Query: 120 LWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLY 179
W + NEP + GY G+FAPGR S +EP+ HN+L++HG V Y
Sbjct: 166 NWITFNEPLCSAIPGYGSGTFAPGR-----------QSTSEPWTVGHNILVAHGRAVKAY 214
Query: 180 KHKYQPYQ-MGKIGITI 195
+ ++P G+IGI +
Sbjct: 215 RDDFKPASGDGQIGIVL 231
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 17/196 (8%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINE 66
TGD+A Y+ +KEDI++++K+G+ ++RFSISW RILP+G +G VN G+ FY +I+
Sbjct: 72 TGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDT 129
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
LL I PFVT+ H+D P AL+ + GG+ + +I F +Y F+ +GDRVK W ++NE
Sbjct: 130 LLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNE 188
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPY 186
P + + G+ G APG YV + A HN+L +H V +++ +
Sbjct: 189 PWVVAIVGHLYGVHAPGMRDIYVA-----------FRAVHNLLRAHARAVKVFR---ETV 234
Query: 187 QMGKIGITILTHWFEP 202
+ GKIGI +FEP
Sbjct: 235 KDGKIGIVFNNGYFEP 250
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 19/207 (9%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ + G++A YH +ED++L+K +G+ +RFSISW R+LP+G +G VN G+ +Y
Sbjct: 43 KVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQG--TGEVNRAGLDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
L++ELLAN I+PF TL H+D PQAL+++ GG+ S + F +Y + FK G ++K
Sbjct: 101 HRLVDELLANGIEPFCTLYHWDLPQALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQ 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI-AAHNMLLSHGALVNLY 179
W + NEP M SNY+G G+ + I +H++L++HG V L+
Sbjct: 160 WITFNEPWCMAF------------LSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLF 207
Query: 180 KHKYQPYQMGKIGITILTHWFEPKFKT 206
+ + G+IGI T W P +T
Sbjct: 208 R---ELGISGEIGIAPNTSWAVPYRRT 231
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 18/195 (9%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ GD+A +HH+KED++LMK++G +RFS++W RI+P +G +N G+ FY
Sbjct: 52 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPA---AGIINEEGLLFY 108
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L++E+ + P +TL H+D PQ +E+E GG+ + ++ F Y +G+R+
Sbjct: 109 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 167
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++NEP + GY G APG ++ E + AAH++L+ HG NL+K
Sbjct: 168 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 216
Query: 181 HKYQPYQMGKIGITI 195
K GKIGIT+
Sbjct: 217 EK---GLTGKIGITL 228
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 18/195 (9%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ GD+A +HH+KED++LMK++G +RFS++W RI+P +G +N G+ FY
Sbjct: 52 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPA---AGIINEEGLLFY 108
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L++E+ + P +TL H+D PQ +E+E GG+ + ++ F Y +G+R+
Sbjct: 109 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 167
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++NEP + GY G APG ++ E + AAH++L+ HG NL+K
Sbjct: 168 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 216
Query: 181 HKYQPYQMGKIGITI 195
K GKIGIT+
Sbjct: 217 EK---GLTGKIGITL 228
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 18/195 (9%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+ GD+A +HH+KED++LMK++G +RFS++W RI+P +G +N G+ FY
Sbjct: 50 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPA---AGIINEEGLLFY 106
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L++E+ + P +TL H+D PQ +E+E GG+ + ++ F Y +G+R+
Sbjct: 107 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 165
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++NEP + GY G APG ++ E + AAH++L+ HG NL+K
Sbjct: 166 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 214
Query: 181 HKYQPYQMGKIGITI 195
K GKIGIT+
Sbjct: 215 EK---GLTGKIGITL 226
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 14/180 (7%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI + +GD+A YH Y++D+ LM+++GL ++RFSI+W RI P S +N G+ FY
Sbjct: 43 KIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDS--SRQINQRGLDFY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L+ L DI P TL H+D PQ +E+E GG+LS + F +Y GD++ L
Sbjct: 101 RRLVEGLHKRDILPMATLYHWDLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPL 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP V GY+ G FAPG +G AH++LLSHG + ++
Sbjct: 160 WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRV-----------AHHLLLSHGQALQAFR 208
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 14/180 (7%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
KI + +GD+A YH Y++D+ LM+++GL ++RFSI+W RI P S +N G+ FY
Sbjct: 64 KIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDS--SRQINQRGLDFY 121
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L+ L DI P TL H+D PQ +E+E GG+LS + F +Y GD++ L
Sbjct: 122 RRLVEGLHKRDILPMATLYHWDLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPL 180
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP V GY+ G FAPG +G AH++LLSHG + ++
Sbjct: 181 WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRV-----------AHHLLLSHGQALQAFR 229
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELLAN 70
A FYHHYKED+KL ++G FR SI+WTRI PKG N G++FY DL +E L
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L EYGGF + K++ FV + + CF+ Y D+VK W + NE N
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQ 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNL 178
Y FAP S V D Y AAH L++ V +
Sbjct: 184 A--NYQ-EDFAPFTNSGIVYK-EGDDREAIMYQAAHYELVASARAVKI 227
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELLAN 70
A FYHHYKED+KL ++G FR SI+WTRI PKG N G++FY DL +E L
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L EYGGF + K++ FV + + CF+ Y D+VK W + NE N
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQ 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNL 178
Y FAP S V D Y AAH L++ V +
Sbjct: 184 A--NYQ-EDFAPFTNSGIVYK-EGDDREAIMYQAAHYELVASARAVKI 227
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELLAN 70
A FYHHYKED+KL + G FR SI+WTRI PKG N G++FY DL +E L
Sbjct: 65 AIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L EYGGF + K++ FV + + CF+ Y D+VK W + NE N
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQ 183
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNL 178
+ FAP S V D Y AAH L++ V +
Sbjct: 184 ANYQED---FAPFTNSGIVYK-EGDDREAIXYQAAHYELVASARAVKI 227
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 103/179 (57%), Gaps = 14/179 (7%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I D STG+ A YH Y+EDI LM+ +G+ +RFS++W RILP+G+ G +NP G+ FY
Sbjct: 43 IRDGSTGEPACDHYHRYEEDIALMQSLGVGVYRFSVAWPRILPEGR--GRINPKGLAFYD 100
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
L++ LLA I PF+TL H+D PQALE+ GG+ S + F +Y + + DRV +
Sbjct: 101 RLVDRLLAAGITPFLTLYHWDLPQALEDR-GGWRSRETAFAFAEYAEAVARALADRVPFF 159
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
A++NEP G+ G APG + N A AAH++LL HG V +
Sbjct: 160 ATLNEPWCSAFLGHWTGEHAPG-----LRNLEAA------LRAAHHLLLGHGLAVEALR 207
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 14/179 (7%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I D STG+ A Y Y+EDI LM+ +G+ ++RFS++W RILP+G+ G +NP G+ FY
Sbjct: 43 IRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGR--GRINPKGLAFYD 100
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
L++ LLA+ I PF+TL H+D P ALEE GG+ S + F +Y + + DRV +
Sbjct: 101 RLVDRLLASGITPFLTLYHWDLPLALEER-GGWRSRETAFAFAEYAEAVARALADRVPFF 159
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
A++NEP G+ G APG + N A AAH++LL HG V +
Sbjct: 160 ATLNEPWCSAFLGHWTGEHAPG-----LRNLEAA------LRAAHHLLLGHGLAVEALR 207
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 14/179 (7%)
Query: 2 IFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYK 61
I D STG+ A Y Y+EDI LM+ +G+ ++RFS++W RILP+G+ G +NP G+ FY
Sbjct: 43 IRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGR--GRINPKGLAFYD 100
Query: 62 DLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLW 121
L++ LLA+ I PF+TL H+D P ALEE GG+ S + F +Y + + DRV +
Sbjct: 101 RLVDRLLASGITPFLTLYHWDLPLALEER-GGWRSRETAFAFAEYAEAVARALADRVPFF 159
Query: 122 ASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
A++NEP G+ G APG + N A AAH++LL HG V +
Sbjct: 160 ATLNEPWCSAFLGHWTGEHAPG-----LRNLEAA------LRAAHHLLLGHGLAVEALR 207
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
++ + TGD+A+ YH ++ED+ LM ++GL ++RFS++W RI P G+ G G+ FY
Sbjct: 56 RVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQPTGR--GPALQKGLDFY 113
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+ L +ELLA I+P TL H+D PQ LE GG+ + F +Y GDRVK
Sbjct: 114 RRLADELLAKGIQPVATLYHWDLPQELENA-GGWPERATAERFAEYAAIAADALGDRVKT 172
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W ++NEP GY G APGR AAH++ L HG V +
Sbjct: 173 WTTLNEPWCSAFLGYGSGVHAPGRTDPVAA-----------LRAAHHLNLGHGLAVQALR 221
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+ + +T+ H P
Sbjct: 222 DRLP--ADAQCSVTLNIHHVRP 241
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 17/202 (8%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP + G APG T +A + H++L++HG V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+ G+IGI W P
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVP 227
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 17/202 (8%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 44 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYY 101
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 102 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 160
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP + G APG T +A + H++L++HG V ++
Sbjct: 161 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 209
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+ G+IGI W P
Sbjct: 210 ---ELGTSGQIGIAPNVSWAVP 228
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 17/202 (8%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQEGLDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP + G APG T +A + H++L++HG V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+ G+IGI W P
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVP 227
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 17/202 (8%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQKGLDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP + G APG T +A + H++L++HG V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+ G+IGI W P
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVP 227
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 17/202 (8%)
Query: 1 KIFDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFY 60
K+F+ G++A YH Y+EDI+LMK++G+ ++RFS+SW RI P G G VN G+ +Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNG--DGEVNQKGLDYY 100
Query: 61 KDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKL 120
+++ L N I+PF TL H+D PQAL++ GG+ + + ++ FV + + F+ + +++
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 121 WASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYK 180
W + NEP + G APG T +A + H++L++HG V ++
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG--------LTNLQTAID---VGHHLLVAHGLSVRRFR 208
Query: 181 HKYQPYQMGKIGITILTHWFEP 202
+ G+IGI W P
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVP 227
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELLAN 70
A FYH Y EDI+L + G FR SI+WTRI P G S N G++FY DL +E L N
Sbjct: 69 AIDFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEP-NEAGLQFYDDLFDECLKN 127
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I+P VTL HF+ P L ++YGG+ + K+++ ++++ CF+ Y D+V W + NE N
Sbjct: 128 GIQPVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQ 187
Query: 131 VMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQP-YQMG 189
+G + G + Y AAH L++ A V L H+ P +Q+G
Sbjct: 188 TNFESDGAXLTDSGIIHQPGE----NRERWXYQAAHYELVASAAAVQL-GHQINPDFQIG 242
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINE 66
T + AS FYH Y D++L ++ G++ R SI+W+RI P G G VN GV+FY L E
Sbjct: 45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAE 102
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
++PFVTL HFD P+AL G FL+ + ++ F+DY FCF+ + + V W + NE
Sbjct: 103 CHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNE 160
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPY 186
+ Y G F PG + + + + HNM++SH V LYK K
Sbjct: 161 IGPIGDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDKGYKG 210
Query: 187 QMGKIGITILTHWFEPK 203
++G + + ++P+
Sbjct: 211 EIGVVHALPTKYPYDPE 227
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINE 66
T + AS FYH Y D++L ++ G++ R SI+W+RI P G G VN GV+FY L E
Sbjct: 45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAE 102
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
++PFVTL HFD P+AL G FL+ + ++ F+DY FCF+ + + V W + NE
Sbjct: 103 CHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNE 160
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPY 186
+ Y G F PG + + + + HNM++SH V LYK K
Sbjct: 161 IGPIGDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDKGYKG 210
Query: 187 QMGKIGITILTHWFEPK 203
++G + + ++P+
Sbjct: 211 EIGVVHALPTKYPYDPE 227
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Query: 7 TGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINE 66
T + AS FYH Y D++L ++ G++ R SI+W+RI P G G VN GV+FY L E
Sbjct: 45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAE 102
Query: 67 LLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNE 126
++PFVTL HFD P+AL G FL+ + ++ F+DY FCF+ + + V W + NE
Sbjct: 103 CHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNE 160
Query: 127 PNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPY 186
+ Y G F PG + + + + HNM++SH V LYK K
Sbjct: 161 IGPIGDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDKGYKG 210
Query: 187 QMGKIGITILTHWFEPK 203
++G + + ++P+
Sbjct: 211 EIGVVHALPTKYPYDPE 227
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 3 FDRSTGDIASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKD 62
+D D AS YH + D+ L+ +G +S+R SI WTR++ + +NP G+ +Y
Sbjct: 42 YDYVGPDTASDAYHQIESDLTLLASLGHNSYRTSIQWTRLIDDFE-QATINPDGLAYYNR 100
Query: 63 LINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWA 122
+I+ LAN I+P + L HFD P AL + YGG+ S +V FV + CF+ +GDRVK W
Sbjct: 101 VIDACLANGIRPVINLHHFDLPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWF 160
Query: 123 SMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGALVNLYKHK 182
NEP +V Y P G A + A+N+ L+ ++ Y+
Sbjct: 161 VHNEPMVVVEGSYLMQFHYPA--------IVDGKKAVQ---VAYNLALATAKVIQAYRRG 209
Query: 183 YQPYQMGKIGITILT 197
G+IG TIL
Sbjct: 210 PAELSDGRIG-TILN 223
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELLAN 70
A FY HYKEDIKL ++G FR SI+WTRI PKG N G+KFY D+ +ELL
Sbjct: 66 AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGD-EAQPNEEGLKFYDDMFDELLKY 124
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPN 128
+I+P +TL HF+ P L ++YG + + K+V FV + + F+ Y +VK W + NE N
Sbjct: 125 NIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEIN 182
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 11 ASGFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELLAN 70
A + Y++DI+LM +G +++RFSI W+R+ P+ N Y+++I+ LL
Sbjct: 45 ACNHWELYRDDIQLMTSLGYNAYRFSIEWSRLFPE---ENKFNEDAFMKYREIIDLLLTR 101
Query: 71 DIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGM 130
I P VTL HF P ++ GGFL + +K + Y + + ++VKL A+ NEP
Sbjct: 102 GITPLVTLHHFTSPLWFMKK-GGFLREENLKHWEKYIEKVAELL-EKVKLVATFNEPMVY 159
Query: 131 VMNGYNGGSFAP 142
VM GY + P
Sbjct: 160 VMMGYLTAYWPP 171
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 79/203 (38%), Gaps = 48/203 (23%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPKGKISGGV--------NPL 55
+GD+ ++H YK+D + +K+G+D R I W RI PK V N +
Sbjct: 48 SGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNII 107
Query: 56 GVKFYKDLINEL--LAN------------DIKP-----FVTLLHFDPPQALEEEYG---- 92
V + I EL +AN D K + L H+ P + +
Sbjct: 108 SVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKL 167
Query: 93 -------GFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPG 143
G+L K V +FV + F D V +W++MNEPN + GY F PG
Sbjct: 168 GPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPG 227
Query: 144 RCSNYVGNCTAGDSATEPYIAAH 166
S A + A I AH
Sbjct: 228 YLS-----FEAAEKAKFNLIQAH 245
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 55/229 (24%)
Query: 13 GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK--------------------------- 45
G+++ + D L +K+G+++ R + W+RI PK
Sbjct: 57 GYWNLNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAV 116
Query: 46 GKISGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQAL-----------EEEYGGF 94
++ N V Y ++ + + K + L H+ P L + G+
Sbjct: 117 ERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGW 176
Query: 95 LSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYN--GGSFAPGRCSNYVGNC 152
L+ + V +F Y + G+ +W++MNEPN + GY G F PG S
Sbjct: 177 LNEESVVEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLS-----L 231
Query: 153 TAGDSATEPYIAAHNMLLSHGALVNLYKHKYQPYQMGKIGITILTHWFE 201
A D A I AH A N+ + +P +G+ WFE
Sbjct: 232 EAADKARRNMIQAHAR-----AYDNIKRFSKKP-----VGLIYAFQWFE 270
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 38/169 (22%)
Query: 13 GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK--------GKISGG------------- 51
G++ +Y++ + +GL + R + W+RI P+ ++ G
Sbjct: 58 GYWGNYRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALE 117
Query: 52 -----VNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYG----------GFLS 96
N + Y+++ ++L + I + L H+ P L + G+L
Sbjct: 118 QLDKMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLD 177
Query: 97 PKIVKDFVDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNG--GSFAPG 143
+ V +F + + D V ++++MNEPN + GY F PG
Sbjct: 178 VRTVIEFAKFSAYVAWKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPG 226
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 38/160 (23%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R ++ W+RI P
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEY------- 91
++ N + Y+++ +L + + + + H+ P L +
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPN 128
G+LS + V +F + + + D V +++MNEPN
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPN 208
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 38/160 (23%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R ++ W+RI P
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEY------- 91
++ N + Y+++ +L + + + + H+ P L +
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPN 128
G+LS + V +F + + + D V +++MNEPN
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPN 208
>pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 45 KGKI-SGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDF 103
KG++ + +P G + + ++ L + P + LH Q ++++YG + +++
Sbjct: 168 KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGSY----VIRHV 223
Query: 104 VDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI 163
+++G D+ K+ A + N +V++ + FA SN V C S TE +
Sbjct: 224 LEHG-----RPEDKSKIVAEIR-GNVLVLSQH---KFA----SNVVEKCVTHASRTERAV 270
Query: 164 AAHNMLLS----HGALVNLYKHKYQPYQMGKI-------GITILTHWFEPKFKT 206
+ H AL + K +Y Y + K+ I+ H P T
Sbjct: 271 LIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIAT 324
>pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 45 KGKI-SGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDF 103
KG++ + +P G + + ++ L + P + LH Q ++++YG + +++
Sbjct: 167 KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY----VIQHV 222
Query: 104 VDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI 163
+++G D+ K+ A + N +V++ + FA SN V C S TE +
Sbjct: 223 LEHG-----RPEDKSKIVAEIR-GNVLVLSQH---KFA----SNVVEKCVTHASRTERAV 269
Query: 164 AAHNMLLS----HGALVNLYKHKYQPYQMGKI-------GITILTHWFEPKFKT 206
+ H AL + K +Y Y + K+ I+ H P T
Sbjct: 270 LIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIAT 323
>pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 45 KGKI-SGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDF 103
KG++ + +P G + + ++ L + P + LH Q ++++YG + +++
Sbjct: 167 KGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNY----VIQHV 222
Query: 104 VDYGDFCFKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYI 163
+++G D+ K+ A + N +V++ + FA SN V C S TE +
Sbjct: 223 LEHG-----RPEDKSKIVAEIR-GNVLVLSQH---KFA----SNVVEKCVTHASRTERAV 269
Query: 164 AAHNMLLS----HGALVNLYKHKYQPYQMGKI-------GITILTHWFEPKFKT 206
+ H AL + K +Y Y + K+ I+ H P T
Sbjct: 270 LIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIAT 323
>pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase
Length = 320
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 11 ASGFYHHYKED--IKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELL 68
G + Y ED K++K+ G DS R I W+ + + K ++ + K +++ L
Sbjct: 34 VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVAL 92
Query: 69 ANDIKPFVTLLHFDPPQALEEEYGGFLSP---KIVKDFVDYGDFCF 111
ND+ + HF+ ++YG L ++ + F DY D F
Sbjct: 93 KNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF 138
>pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase In Complex With Substrate
Length = 320
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 11 ASGFYHHYKED--IKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELL 68
G + Y ED K++K+ G DS R I W+ + + K ++ + K +++ L
Sbjct: 34 VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVAL 92
Query: 69 ANDIKPFVTLLHFDPPQALEEEYGGFLSP---KIVKDFVDYGDFCF 111
ND+ + HF+ ++YG L ++ + F DY D F
Sbjct: 93 KNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF 138
>pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
pdb|3NCO|B Chain B, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
Length = 320
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 11 ASGFYHHYKED--IKLMKKVGLDSFRFSISWTRILPKGKISGGVNPLGVKFYKDLINELL 68
G + Y ED K++K+ G DS R I W+ + + K ++ + K +++ L
Sbjct: 34 VEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVAL 92
Query: 69 ANDIKPFVTLLHFDPPQALEEEYGGFLSP---KIVKDFVDYGDFCF 111
ND+ + HF+ ++YG L ++ + F DY D F
Sbjct: 93 KNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF 138
>pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 28/167 (16%)
Query: 51 GVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFC 110
+P G + + ++ A P + LH Q ++++YG + +++ +++G
Sbjct: 176 STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNY----VIQHVLEHG--- 228
Query: 111 FKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLL 170
D+ K+ ++E G V+ + FA SN V C S E + +
Sbjct: 229 --RPEDKSKI---VSEIRGKVL-ALSQHKFA----SNVVEKCVTHASRAERALLIDEVCC 278
Query: 171 S----HGALVNLYKHKYQPYQMGKI-------GITILTHWFEPKFKT 206
H AL + K +Y Y + K+ I+ H P T
Sbjct: 279 QNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITT 325
>pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 28/167 (16%)
Query: 51 GVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVKDFVDYGDFC 110
+P G + + ++ A P + LH Q ++++YG + +++ +++G
Sbjct: 176 STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNY----VIQHVLEHG--- 228
Query: 111 FKTYGDRVKLWASMNEPNGMVMNGYNGGSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLL 170
D+ K+ ++E G V+ + FA SN V C S E + +
Sbjct: 229 --RPEDKSKI---VSEIRGKVL-ALSQHKFA----SNVVEKCVTHASRAERALLIDEVCC 278
Query: 171 S----HGALVNLYKHKYQPYQMGKI-------GITILTHWFEPKFKT 206
H AL + K +Y Y + K+ I+ H P T
Sbjct: 279 QNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITT 325
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 38/160 (23%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R + W+R P
Sbjct: 49 SGDLPENGPGYWGNYKTFHNNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYKDLINELLANDIKPFVTLLHF-------DPPQALEEEY 91
++ N + Y+++ +L + + + H+ DP + ++
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPN 128
G+LS + V +F + + + D V +++MNEPN
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYTAWKFDDLVDEYSTMNEPN 208
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 38/160 (23%)
Query: 7 TGDIAS---GFYHHYKEDIKLMKKVGLDSFRFSISWTRILPK------------------ 45
+GD+ G++ +YK +K+GL R + W+R P
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEV 108
Query: 46 -------GKISGGVNPLGVKFYKDLINELLANDIKPFVTLLHF-------DPPQALEEEY 91
++ N + Y+++ +L + + + H+ DP + ++
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDF 168
Query: 92 ---GGFLSPKIVKDFVDYGDFCFKTYGDRVKLWASMNEPN 128
G+LS + V +F + + + D V +++MNEPN
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYTAWKFDDLVDEYSTMNEPN 208
>pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 45 KGKI-SGGVNPLGVKFYKDLINELLANDIKPFVTLLHFDPPQALEEEYGGFLSPKIVK 101
KG++ S +P G + + ++ A P + LH Q ++++YG ++ +++
Sbjct: 169 KGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLE 226
>pdb|3GHN|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of
Human Adamts13 (Form-2)
Length = 419
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 138 GSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGAL 175
GSF GR YV T + T YIA H L +H A+
Sbjct: 276 GSFTAGRAREYVTFLTVTPNLTSVYIANHRPLFTHLAV 313
>pdb|3GHM|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of
Human Adamts13 (Form-1)
Length = 410
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 138 GSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGAL 175
GSF GR YV T + T YIA H L +H A+
Sbjct: 276 GSFTAGRAREYVTFLTVTPNLTSVYIANHRPLFTHLAV 313
>pdb|3VN4|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of
Human Adamts13 (P475s Mutant)
Length = 410
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 138 GSFAPGRCSNYVGNCTAGDSATEPYIAAHNMLLSHGAL 175
GSF GR YV T + T YIA H L +H A+
Sbjct: 276 GSFTAGRAREYVTFLTVTPNLTSVYIANHRPLFTHLAV 313
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.142 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,612,619
Number of Sequences: 62578
Number of extensions: 340480
Number of successful extensions: 937
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 708
Number of HSP's gapped (non-prelim): 93
length of query: 223
length of database: 14,973,337
effective HSP length: 95
effective length of query: 128
effective length of database: 9,028,427
effective search space: 1155638656
effective search space used: 1155638656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)