Query 046614
Match_columns 142
No_of_seqs 127 out of 665
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 03:59:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046614.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046614hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y6ia2 a.261.1.1 (A:83-233) M 62.4 0.32 2.3E-05 35.3 -2.1 31 36-68 117-148 (151)
2 d1z3xa2 a.261.1.1 (A:88-235) G 61.5 0.25 1.8E-05 35.7 -2.8 30 36-66 117-146 (148)
3 d1unda_ a.14.1.1 (A:) Advillin 53.9 2.2 0.00016 23.8 1.1 19 60-78 1-19 (36)
4 d2bkfa1 d.15.2.2 (A:1-85) Next 44.6 12 0.00085 24.2 3.8 48 47-96 11-67 (85)
5 d1fc4a_ c.67.1.4 (A:) 2-amino- 37.0 20 0.0015 27.5 4.8 37 46-82 39-80 (401)
6 d2al3a1 d.15.1.2 (A:10-85) Tet 36.4 14 0.001 23.3 3.1 37 43-81 2-38 (76)
7 d2r85a1 c.30.1.8 (A:1-99) 5-fo 32.8 0.78 5.7E-05 31.2 -3.9 23 36-58 64-88 (99)
8 d1yu5x1 a.14.1.1 (X:10-76) Vil 31.3 7.7 0.00056 24.2 1.0 20 59-78 31-50 (67)
9 d1tjya_ c.93.1.1 (A:) AI-2 rec 26.3 27 0.002 24.0 3.5 32 49-80 1-35 (316)
10 d2pbza1 c.30.1.8 (A:4-99) 5-fo 25.4 1.3 9.6E-05 29.9 -3.8 23 36-58 59-83 (96)
11 d1ujsa_ a.14.1.1 (A:) Actin-bi 24.9 11 0.0008 24.7 0.9 20 59-78 46-65 (88)
12 d1qzpa_ a.14.1.1 (A:) Dematin 24.5 8.3 0.00061 24.1 0.3 20 59-78 32-51 (68)
13 d1yu8x1 a.14.1.1 (X:42-76) Vil 24.1 13 0.00093 20.3 1.0 18 61-78 1-18 (35)
14 d1pzqa_ a.34.3.1 (A:) Erythron 22.6 19 0.0014 21.7 1.7 11 6-16 36-46 (60)
No 1
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=62.38 E-value=0.32 Score=35.27 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=20.7
Q ss_pred CcCCCCCeEEEEeCCc-eeEeEeccCCCcHHHHH
Q 046614 36 SSVANKGHFVVYTTDE-KRFTVPLEYLSRNVFIE 68 (142)
Q Consensus 36 ~~~vpkG~~~VyVGe~-~RfvVp~~yL~hp~F~~ 68 (142)
+..+|+||+|+.-.-+ -| +=-..|+||+|.+
T Consensus 117 ~l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 117 DLSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp STTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred cCCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 5578999999864322 22 2234889999864
No 2
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=61.53 E-value=0.25 Score=35.73 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=19.9
Q ss_pred CcCCCCCeEEEEeCCceeEeEeccCCCcHHH
Q 046614 36 SSVANKGHFVVYTTDEKRFTVPLEYLSRNVF 66 (142)
Q Consensus 36 ~~~vpkG~~~VyVGe~~RfvVp~~yL~hp~F 66 (142)
+..+|+||+|+. +..+-.-|=-.+|+||.|
T Consensus 117 ~l~AP~GHLP~~-~~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 117 DLSAPRGHLPLT-NQLRGVQVLNALLNHPAW 146 (148)
T ss_dssp STTSCTTCCSCC-CCTTCSHHHHHHHTCGGG
T ss_pred cCCCCCCCCCcC-CccchHHHHHHHhcCccc
Confidence 556899999974 443333444567788876
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.89 E-value=2.2 Score=23.80 Aligned_cols=19 Identities=26% Similarity=0.669 Sum_probs=17.2
Q ss_pred CCCcHHHHHHHHhhhhhcC
Q 046614 60 YLSRNVFIELLRMSEEEFG 78 (142)
Q Consensus 60 yL~hp~F~~LL~~aeeEfG 78 (142)
||+.-.|++++.++.+||-
T Consensus 1 yLsd~dF~~vFgmsr~eF~ 19 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQFA 19 (36)
T ss_dssp CCCHHHHHHHHSSCHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHH
Confidence 7999999999999999983
No 4
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.63 E-value=12 Score=24.20 Aligned_cols=48 Identities=10% Similarity=0.248 Sum_probs=34.3
Q ss_pred EeCCceeEeEeccCCCcHHHHHHHHhhhhhcCCC--------C-CCCeEecCcHHHHHH
Q 046614 47 YTTDEKRFTVPLEYLSRNVFIELLRMSEEEFGLP--------S-FGPITLPCDSTFLNY 96 (142)
Q Consensus 47 yVGe~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~--------~-~G~L~iPCd~~~Fe~ 96 (142)
|-||-.||.++.. +++.|.+|..+-+.-||.+ . +.-++|.|++++=|-
T Consensus 11 f~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 11 FKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp ETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred ECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 4466899998533 4677899999999888853 2 344789998875443
No 5
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=36.96 E-value=20 Score=27.55 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=28.2
Q ss_pred EEeCCceeEe--EeccCCC---cHHHHHHHHhhhhhcCCCCC
Q 046614 46 VYTTDEKRFT--VPLEYLS---RNVFIELLRMSEEEFGLPSF 82 (142)
Q Consensus 46 VyVGe~~Rfv--Vp~~yL~---hp~F~~LL~~aeeEfG~~~~ 82 (142)
|.+.|+++|+ ..-+||+ ||.+++....+-+.||...-
T Consensus 39 v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 39 ITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp EEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred EEecCCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcc
Confidence 4556778886 3446764 99999999999999996543
No 6
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.45 E-value=14 Score=23.35 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=29.1
Q ss_pred eEEEEeCCceeEeEeccCCCcHHHHHHHHhhhhhcCCCC
Q 046614 43 HFVVYTTDEKRFTVPLEYLSRNVFIELLRMSEEEFGLPS 81 (142)
Q Consensus 43 ~~~VyVGe~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~~ 81 (142)
++.|..-..+|..|++.= .-...+.|++|-+.|||+.
T Consensus 2 ~V~Vl~~~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~ 38 (76)
T d2al3a1 2 AVSVLAPNGRRHTVKVTP--STVLLQVLEDTCRRQDFNP 38 (76)
T ss_dssp CEEEECTTSCEEEECCCT--TSBHHHHHHHHHHHTTCCG
T ss_pred cEEEECCCCcEEEEEeCC--CcCHHHHHHHHHHHhCCCh
Confidence 456666678999998853 3467889999999999974
No 7
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=32.82 E-value=0.78 Score=31.17 Aligned_cols=23 Identities=26% Similarity=0.424 Sum_probs=17.7
Q ss_pred CcCCCCCeEEEEeC-Cc-eeEeEec
Q 046614 36 SSVANKGHFVVYTT-DE-KRFTVPL 58 (142)
Q Consensus 36 ~~~vpkG~~~VyVG-e~-~RfvVp~ 58 (142)
..-||.|.|++|+| |+ +.|.||+
T Consensus 64 ~I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 64 AVVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEEecCCCEEEEEcHHHHhcCCCCc
Confidence 55699999999999 32 4487775
No 8
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.27 E-value=7.7 Score=24.16 Aligned_cols=20 Identities=25% Similarity=0.404 Sum_probs=18.3
Q ss_pred cCCCcHHHHHHHHhhhhhcC
Q 046614 59 EYLSRNVFIELLRMSEEEFG 78 (142)
Q Consensus 59 ~yL~hp~F~~LL~~aeeEfG 78 (142)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsd~dF~~vFgms~~eF~ 50 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 58999999999999999983
No 9
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=26.29 E-value=27 Score=23.97 Aligned_cols=32 Identities=9% Similarity=0.115 Sum_probs=23.2
Q ss_pred CCceeEeEeccCCCcHHHHHHHHh---hhhhcCCC
Q 046614 49 TDEKRFTVPLEYLSRNVFIELLRM---SEEEFGLP 80 (142)
Q Consensus 49 Ge~~RfvVp~~yL~hp~F~~LL~~---aeeEfG~~ 80 (142)
|..+|..+=+..++||.|..+.+- +.+++|++
T Consensus 1 G~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 1 GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 445666666788999999998654 55677853
No 10
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=25.38 E-value=1.3 Score=29.86 Aligned_cols=23 Identities=22% Similarity=0.432 Sum_probs=17.5
Q ss_pred CcCCCCCeEEEEeC-Cc-eeEeEec
Q 046614 36 SSVANKGHFVVYTT-DE-KRFTVPL 58 (142)
Q Consensus 36 ~~~vpkG~~~VyVG-e~-~RfvVp~ 58 (142)
..-+|.|.|++|+| |+ +.+.||+
T Consensus 59 aI~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 59 GIVVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp SBCCCBTTHHHHSCHHHHHTCCSCC
T ss_pred eEEEcCCCEEEEecHHHHhhCCCCc
Confidence 66799999999999 32 4566664
No 11
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.88 E-value=11 Score=24.65 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=18.5
Q ss_pred cCCCcHHHHHHHHhhhhhcC
Q 046614 59 EYLSRNVFIELLRMSEEEFG 78 (142)
Q Consensus 59 ~yL~hp~F~~LL~~aeeEfG 78 (142)
.||++-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 48999999999999999985
No 12
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.52 E-value=8.3 Score=24.07 Aligned_cols=20 Identities=45% Similarity=0.624 Sum_probs=18.3
Q ss_pred cCCCcHHHHHHHHhhhhhcC
Q 046614 59 EYLSRNVFIELLRMSEEEFG 78 (142)
Q Consensus 59 ~yL~hp~F~~LL~~aeeEfG 78 (142)
.||+.-.|++++.++.+||-
T Consensus 32 ~yLsd~dF~~vFgms~~eF~ 51 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEFG 51 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 58999999999999999983
No 13
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.06 E-value=13 Score=20.31 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=14.9
Q ss_pred CCcHHHHHHHHhhhhhcC
Q 046614 61 LSRNVFIELLRMSEEEFG 78 (142)
Q Consensus 61 L~hp~F~~LL~~aeeEfG 78 (142)
|+.-.|++++.++.+||-
T Consensus 1 Lsd~dF~~vfgmsr~eF~ 18 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAFA 18 (35)
T ss_dssp SCHHHHHHHHSSCHHHHH
T ss_pred CCHHHHHHHHCCCHHHHH
Confidence 567789999999999873
No 14
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=22.61 E-value=19 Score=21.65 Aligned_cols=11 Identities=45% Similarity=0.951 Sum_probs=10.0
Q ss_pred HHHHHHHHHhh
Q 046614 6 RLIELARKWQK 16 (142)
Q Consensus 6 kL~~~~kKWq~ 16 (142)
||-.++|+||+
T Consensus 36 rle~llrrw~s 46 (60)
T d1pzqa_ 36 RLESLLRRWNS 46 (60)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 78899999997
Done!