BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046619
(239 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana
tabacum GN=TGA21 PE=1 SV=1
Length = 456
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 9 FAEFFEKWVCQLDDYSQQLIRISKESSSEAEQQALVSKLTSHYKEYYTVKWALAHEDVLV 68
F + +W+ + + + +L +S+ E +++V+ +T+H+ E + VK A DV
Sbjct: 236 FDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEVFRVKGNAAKADVFH 295
Query: 69 FYCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLK 128
+W + E + W+ G++PS + +L+ + L LTEQQL I L+
Sbjct: 296 VLSGMWKTPAERCFMWIGGFRPSELLKLLVN----------QLEPLTEQQLAGIYNLQQS 345
Query: 129 IRLEEEKVEREMERQQVALADRKMVELARLTSRLSNGEVD---GLVEVALKGLLSGLEKV 185
E+ + + ME Q +LA+ + S+G+V G + +A+ G L LE
Sbjct: 346 SHQAEDALSQGMEALQQSLAE--TLANGSPAPEGSSGDVANYMGQMAMAM-GKLGTLEGF 402
Query: 186 MKAADCVRLKTLKGILDVLSTKQSVDFL 213
++ AD +R +TL+ + VL+T+QS L
Sbjct: 403 LRQADNLRQQTLQQMHRVLTTRQSARAL 430
>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum
PE=1 SV=2
Length = 476
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 13 FEKWVCQLDDYSQQLIRISKESSSEAEQQALVSKLTSHYKEYYTVKWALAHEDVLVFYCP 72
+ +W+ + + + +L + + + + + +V + S Y E++ +K A DV
Sbjct: 263 YARWLEEHNKHINELRAAANAHAGDDDLRKIVDSIMSQYDEFFRLKGVAAKADVFHVLSG 322
Query: 73 VWVSTFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLE 132
+W + E + W+ G++ S + +L+ G L LTEQQL I L+ +
Sbjct: 323 MWKTPAERCFMWLGGFRSSELLKLL----------AGQLEPLTEQQLTGICNLQQSSQQA 372
Query: 133 EEKVEREMERQQVALADRKMVELARLTSRLSNGEVD---GLVEVALKGLLSGLEKVMKAA 189
E+ + + ME Q +LA+ + L S+G V G + +A+ G L LE ++ A
Sbjct: 373 EDALSQGMEALQQSLAE--TLASGSLGPAGSSGNVASYMGQMAMAM-GKLGTLENFLRQA 429
Query: 190 DCVRLKTLKGILDVLSTKQSV 210
D +RL+TL+ + +L+T+QS
Sbjct: 430 DNLRLQTLQQMQRILTTRQSA 450
>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1
Length = 330
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 9 FAEFFEKWVCQLDDYSQQLIRISKESSSEAEQQALVSKLTSHYKEYYTVKWALAHEDVLV 68
F +W+ + + +L + ++E + +V + +HY+E + +K A DV
Sbjct: 114 FDAEHSRWLEEKNKQMNELRSALNAHAGDSELRIIVDGVMAHYEELFRIKSNAAKNDVFH 173
Query: 69 FYCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLK 128
+W + E + W+ G++ S + +L+ L +TE+QL I L+
Sbjct: 174 LLSGMWKTPAERCFLWLGGFRSSELLKLL----------ANQLEPMTERQLMGINNLQQT 223
Query: 129 IRLEEEKVEREMERQQVALADRKMVELARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKA 188
+ E+ + + ME Q +LAD +S + G + +A+ G L LE ++
Sbjct: 224 SQQAEDALSQGMESLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAM-GKLGTLEGFIRQ 282
Query: 189 ADCVRLKTLKGILDVLSTKQSVDFL 213
AD +RL+TL+ ++ VL+T+QS L
Sbjct: 283 ADNLRLQTLQQMIRVLTTRQSARAL 307
>sp|Q39163|TGA5_ARATH Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2
Length = 330
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 13 FEKWVCQLDDYSQQLIRISKESSSEA---EQQALVSKLTSHYKEYYTVKWALAHEDVLVF 69
+ +W +D ++Q+ +S S A E + +V + +HY+E Y +K A DV
Sbjct: 118 YRRWQ---EDKNRQMKELSSAIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHL 174
Query: 70 YCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKI 129
+W + E + W+ G++ S + +L+ S L LTEQQ I L+
Sbjct: 175 LSGMWKTPAERCFLWLGGFRSSELLKLIAS----------QLEPLTEQQSLDINNLQQSS 224
Query: 130 RLEEEKVEREMERQQVALADRKMVELARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKAA 189
+ E+ + + M+ Q +LAD +S + G + +A+ G L LE ++ A
Sbjct: 225 QQAEDALSQGMDNLQQSLADTLSSGTLGSSSSGNVASYMGQMAMAM-GKLGTLEGFIRQA 283
Query: 190 DCVRLKTLKGILDVLSTKQSV 210
D +RL+T + ++ +L+T+QS
Sbjct: 284 DNLRLQTYQQMVRLLTTRQSA 304
>sp|P23923|HBP1B_WHEAT Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1
Length = 332
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 9 FAEFFEKWVCQLDDYSQQLIRISKESSSEAEQQALVSKLTSHYKEYYTVKWALAHEDVLV 68
F + +W+ + + +L + + E +++V K+ SHY E + K A DV
Sbjct: 114 FDTEYARWLEEHNRQVNELRAAVNAHAGDTELRSVVEKIMSHYDEIFKQKGNAAKADVFH 173
Query: 69 FYCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLK 128
+W + E + W+ G++PS + +L+ + L LTEQQL I L+
Sbjct: 174 VLSGMWKTPAERCFLWLGGFRPSELLKLLST----------QLEPLTEQQLSGICNLQQS 223
Query: 129 IRLEEEKVEREMERQQVALADRKMVELARLTSRLSNGEVDGLVEVALK-GLLSGLEKVMK 187
+ E+ + + ME Q +LA+ + S + + + ++A+ G L LE +
Sbjct: 224 SQQAEDALSQGMEALQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLS 283
Query: 188 AADCVRLKTLKGILDVLSTKQSVDFL 213
AD +R +TL+ + +L+T+QS L
Sbjct: 284 QADNLRQQTLQQMQRILTTRQSARAL 309
>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2
Length = 330
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 35 SSEAEQQALVSKLTSHYKEYYTVKWALAHEDVLVFYCPVWVSTFEMAYSWVTGWKPSIIF 94
+ + E + +V + +HY+E + +K A DV +W + E + W+ G++ S +
Sbjct: 140 AGDTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELL 199
Query: 95 RLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVEREMERQQVALADRKMVE 154
+L+ L +TE+Q+ I L+ + E+ + + ME Q +LAD
Sbjct: 200 KLL----------ANQLEPMTERQVMGINSLQQTSQQAEDALSQGMESLQQSLADTLSSG 249
Query: 155 LARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKAADCVRLKTLKGILDVLSTKQSV 210
+S + G + +A+ G L LE ++ AD +RL+TL+ +L VL+T+QS
Sbjct: 250 TLGSSSSDNVASYMGQMAMAM-GQLGTLEGFIRQADNLRLQTLQQMLRVLTTRQSA 304
>sp|Q39237|TGA1_ARATH Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2
Length = 368
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 36 SEAEQQALVSKLTSHYKEYYTVKWALAHEDVLVFYCPVWVSTFEMAYSWVTGWKPSIIFR 95
++ E ++LV HY E + +K + A DV +W ++ E + W+ G++PS
Sbjct: 183 NDIELRSLVENAMKHYFELFRMKSSAAKADVFFVMSGMWRTSAERFFLWIGGFRPS---- 238
Query: 96 LVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVEREMERQQVALADRKMVEL 155
L K ++P LT+QQL + L+ + E+ + + ME+ Q LAD
Sbjct: 239 ---DLLKVLLP---HFDVLTDQQLLDVCNLKQSCQQAEDALTQGMEKLQHTLAD------ 286
Query: 156 ARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKAADCVRLKTLKGILDVLSTKQSV 210
+L G V A+ L L + AD +R +TL+ + +L+T+Q+
Sbjct: 287 CVAAGQLGEGSYIPQVNSAMD-RLEALVSFVNQADHLRHETLQQMYRILTTRQAA 340
>sp|Q39162|TGA4_ARATH Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2
Length = 364
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 36 SEAEQQALVSKLTSHYKEYYTVKWALAHEDVLVFYCPVWVSTFEMAYSWVTGWKPSIIFR 95
S+ E ++LV HY + + +K A A DV +W ++ E + W+ G++PS
Sbjct: 179 SDIELRSLVENAMKHYFQLFRMKSAAAKIDVFYVMSGMWKTSAERFFLWIGGFRPS---- 234
Query: 96 LVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVEREMERQQVALADRKMVEL 155
L K ++P LT+QQL + LR + E+ + + ME+ Q LA+
Sbjct: 235 ---ELLKVLLP---HFDPLTDQQLLDVCNLRQSCQQAEDALSQGMEKLQHTLAE------ 282
Query: 156 ARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKAADCVRLKTLKGILDVLSTKQSV 210
+ +L G + A++ L L + AD +R +TL+ + +L+T+Q+
Sbjct: 283 SVAAGKLGEGSYIPQMTCAME-RLEALVSFVNQADHLRHETLQQMHRILTTRQAA 336
>sp|Q93ZE2|TGA7_ARATH Transcription factor TGA7 OS=Arabidopsis thaliana GN=TGA7 PE=1 SV=1
Length = 368
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 36 SEAEQQALVSKLTSHYKEYYTVKWALAHEDVLVFYCPVWVSTFEMAYSWVTGWKPSIIFR 95
S+ E + LV +HY + +K A DV +W ++ E + W+ G++PS +
Sbjct: 182 SDIELKMLVESCLNHYANLFQMKSDAAKADVFYLISGMWRTSTERFFQWIGGFRPSELLN 241
Query: 96 LVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVEREMERQQVALADRKMVEL 155
+V +P L LT+QQ+ ++ L+ + E+ + + +++ Q +LA+ +++
Sbjct: 242 VV-------MP---YLQPLTDQQILEVRNLQQSSQQAEDALSQGIDKLQQSLAESIVID- 290
Query: 156 ARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKAADCVRLKTLKGILDVLSTKQSV 210
A + S + +E L LE + AD +R +TL+ + +L+T+QS
Sbjct: 291 AVIESTHYPTHMAAAIEN-----LQALEGFVNQADHLRQQTLQQMAKILTTRQSA 340
>sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana GN=TGA3 PE=1 SV=1
Length = 384
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 43 LVSKLTSHYKEYYTVKWALAHEDVLVFYCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRK 102
LV +HY + +K A DV +W ++ E + W+ G++PS + +V
Sbjct: 204 LVDSCLNHYANLFRMKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVV----- 258
Query: 103 TMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVEREMERQQVALADRKMVELARLTSRL 162
+P + LT+QQL ++ L+ + EE + + +++ Q L + +++ ++ +
Sbjct: 259 --MP---YVEPLTDQQLLEVRNLQQSSQQAEEALSQGLDKLQQGLVESIAIQI-KVVESV 312
Query: 163 SNGEVDGLVEVALKGLLSGLEKVMKAADCVRLKTLKGILDVLSTKQSV 210
++G + A++ L LE + AD +R +TL+ + +L+T+Q+
Sbjct: 313 NHG---APMASAMEN-LQALESFVNQADHLRQQTLQQMSKILTTRQAA 356
>sp|P14232|TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1A OS=Nicotiana
tabacum GN=TGA1A PE=1 SV=1
Length = 359
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 8 KFAEFFEKWVCQLDDYSQQLIRISKESS-SEAEQQALVSKLTSHYKEYYTVKWALAHEDV 66
++ + E+ Q +D +RI+ S EAE + +V +HY + + +K A DV
Sbjct: 149 EYGHWVEEQTRQTND-----LRIALHSQIGEAELRIIVDGYLNHYFDLFRMKATAAKADV 203
Query: 67 LVFYCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELR 126
L +W ++ E + W+ G++PS L K + P L LTEQQLR++ L
Sbjct: 204 LYIMSGMWKTSAERFFMWIGGFRPS-------ELLKVLTP---HLELLTEQQLREVCNLT 253
Query: 127 LKIRLEEEKVEREMERQQVALADRKMVELARLTSRLSNGEVDGLVEVALKGLLSGLEKVM 186
+ E+ + + M + LA+ A RL G L L + +
Sbjct: 254 QSCQQAEDALSQGMVKLHQILAE------AVAAGRLGEGNYTLPQMGPAIEKLEDLVRFV 307
Query: 187 KAADCVRLKTLKGILDVLSTKQSVDFL 213
AD +R +TL+ + +L+T Q+ L
Sbjct: 308 NQADHLRQETLQQMSRILNTCQAAQGL 334
>sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1
SV=1
Length = 452
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 43 LVSKLTSHYKEYYTVKWALAHEDVLVFYCPVWVSTFEMAYSWVTGWKPSIIFRLVDSLRK 102
LV + SHY E + +K DV +W + E + W+ G++ S + +++
Sbjct: 270 LVDAVMSHYDEIFRLKGIGTKVDVFHMLSGMWKTPAERFFMWLGGFRSSELLKIL----- 324
Query: 103 TMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVEREMERQQVALADRKMVELARLTSRL 162
G + LT+QQL I L+ + E+ + + ME Q +L + + A +
Sbjct: 325 -----GNHVDPLTDQQLIGICNLQQSSQQAEDALSQGMEALQQSLLE--TLSSASMGPNS 377
Query: 163 SNGEVDGLVEVALK-GLLSGLEKVMKAADCVRLKTLKGILDVLSTKQSV 210
S D + +A+ G L LE ++ AD +R +TL+ + +L+T+Q+
Sbjct: 378 SANVADYMGHMAMAMGKLGTLENFLRQADLLRQQTLQQLHRILTTRQAA 426
>sp|B8JA66|MUTS_ANAD2 DNA mismatch repair protein MutS OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=mutS PE=3 SV=1
Length = 882
Score = 38.9 bits (89), Expect = 0.032, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 76 STFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEK 135
+ E+ + G K + L+D R PGG LAE L + + ++ EE
Sbjct: 273 TNLELERTLSGGRKKGTLLALLD--RTVTAPGGRRLAEWLRYPLTDLARIGARLDAVEEL 330
Query: 136 VEREMERQQVALADRKMVELARLTSRLSNGE 166
+ R+++ALA R + +L RL SRL G+
Sbjct: 331 TGAAVAREELALALRPVADLERLLSRLVLGQ 361
>sp|B4UCY7|MUTS_ANASK DNA mismatch repair protein MutS OS=Anaeromyxobacter sp. (strain K)
GN=mutS PE=3 SV=1
Length = 882
Score = 38.9 bits (89), Expect = 0.036, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 76 STFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEK 135
+ E+ + G K + L+D R PGG LAE L + + ++ EE
Sbjct: 273 TNLELERTLSGGRKKGTLLALLD--RTVTAPGGRRLAEWLRYPLTDLARIGARLDAVEEL 330
Query: 136 VEREMERQQVALADRKMVELARLTSRLSNGE 166
+ R+++ALA R + +L RL SRL G+
Sbjct: 331 TGAAVAREELALALRPVADLERLLSRLVLGQ 361
>sp|Q2IIJ3|MUTS_ANADE DNA mismatch repair protein MutS OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=mutS PE=3 SV=1
Length = 882
Score = 35.4 bits (80), Expect = 0.40, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 76 STFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEK 135
+ E+ + G K + L+D R PGG LAE L + + ++ EE
Sbjct: 273 TNLELERTLSGGRKKGTLLALLD--RTVTAPGGRRLAEWLRYPLADLARIGARLDAVEEL 330
Query: 136 VEREMERQQVALADRKMVELARLTSRLSNGE 166
+ R+++A A R + +L RL SRL G+
Sbjct: 331 SGASVAREELAGALRPVADLERLLSRLVLGQ 361
>sp|Q1QZX1|SYA_CHRSD Alanine--tRNA ligase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=alaS PE=3 SV=1
Length = 868
Score = 34.3 bits (77), Expect = 0.88, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 101 RKTMVPGGGSLAELTEQQL---RKIEELRLKIRLEEEKVEREMERQQVALADRKMVELAR 157
R V G G+LA +Q+ R E+L+ K E ++E +ER + EL R
Sbjct: 685 RIEAVTGEGALAYFRDQEAKVARVAEQLKAKPEQVEARLEATLERNRTLEK-----ELER 739
Query: 158 LTSRLSNGEV-DGLVEVALKGLLSGLEKVMKAADCVRLKTLKGILDVLSTK 207
L ++L++ D L +V ++G++ + K + V K L+G+LD L K
Sbjct: 740 LKAKLASATSGDMLADVRE---VAGVKLLAKQVEGVGGKELRGLLDQLKNK 787
>sp|A7HC64|MUTS_ANADF DNA mismatch repair protein MutS OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=mutS PE=3 SV=1
Length = 882
Score = 34.3 bits (77), Expect = 0.90, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 76 STFEMAYSWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEK 135
+ E+ + G K + L+D R PGG LAE L ++ + ++ EE
Sbjct: 272 TNLELERTLNGGRKKGSLLALLD--RSVTAPGGRRLAEWLRYPLTELAPIHARLDAVEEL 329
Query: 136 VEREMERQQVALADRKMVELARLTSRLSNGE 166
+ R+ +A A R + + RL SRL G+
Sbjct: 330 AGASVAREDLAAALRPVADAERLLSRLVLGQ 360
>sp|P18759|SEC18_YEAST Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC18 PE=1 SV=2
Length = 758
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 97 VDSLRKTMVPGGGSLAELTEQQLRKIE--ELRLKIRLEEEK--------VEREMERQQVA 146
VD L +V G + +L + L + E++++I L +EK ++M +
Sbjct: 382 VDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMM 441
Query: 147 LADRKMVELARLTSRLSNGEVDGLVEVA 174
D + ELA LT S E++GLV+ A
Sbjct: 442 SDDVNLAELAALTKNFSGAEIEGLVKSA 469
>sp|C5CI89|FTHS_KOSOT Formate--tetrahydrofolate ligase OS=Kosmotoga olearia (strain TBF
19.5.1) GN=fhs PE=3 SV=1
Length = 556
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 83 SWVTGWKPSIIFRLVDSLRKTMVPGGGSLAELTEQQLRKIEELRLKIRLEEEKVER 138
S V G+KPS++ LV SLR + GG +TE+ L +E+ + +++ E + +
Sbjct: 315 SQVAGFKPSVVV-LVASLRALKLHGGAKKDSITEENLEALEKGFVNLQVHYENLRK 369
>sp|Q5M2S3|SECA_STRT2 Protein translocase subunit SecA OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=secA PE=3 SV=1
Length = 849
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 141 ERQQVALADRKM-VELARLTSRLSNGEVDGLV----EVALKGLLSGLEKVMKAADCVRLK 195
ER V A+R + E+ + R N VDG E ALKG+L+ + + D + L+
Sbjct: 615 ERYDVITAERDLEPEIKAMIKRTINRTVDGHSRNDQEEALKGILNFARQALVPEDAISLE 674
Query: 196 TLKGILDVLSTKQSVDFLA 214
LK + +V TK+SV++ A
Sbjct: 675 DLKEVGEV--TKRSVNYDA 691
>sp|Q03IX4|SECA_STRTD Protein translocase subunit SecA OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=secA PE=3 SV=1
Length = 849
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 141 ERQQVALADRKM-VELARLTSRLSNGEVDGLV----EVALKGLLSGLEKVMKAADCVRLK 195
ER V A+R + E+ + R N VDG E ALKG+L+ + + D + L+
Sbjct: 615 ERYDVITAERDLEPEIKAMIKRTINRTVDGHSRNDQEEALKGILNFARQALVPEDAISLE 674
Query: 196 TLKGILDVLSTKQSVDFLA 214
LK + +V TK+SV++ A
Sbjct: 675 DLKEVGEV--TKRSVNYDA 691
>sp|Q5LY68|SECA_STRT1 Protein translocase subunit SecA OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=secA PE=3 SV=1
Length = 849
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 141 ERQQVALADRKM-VELARLTSRLSNGEVDGLV----EVALKGLLSGLEKVMKAADCVRLK 195
ER V A+R + E+ + R N VDG E ALKG+L+ + + D + L+
Sbjct: 615 ERYDVITAERDLEPEIKAMIKRTINRTVDGHSRNDQEEALKGILNFARQALVPEDAISLE 674
Query: 196 TLKGILDVLSTKQSVDFLA 214
LK + +V TK+SV++ A
Sbjct: 675 DLKEVGEV--TKRSVNYDA 691
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 31.6 bits (70), Expect = 5.7, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 116 EQQLRKIEELRLKI-----RLEEEKV--EREMERQQVALADRKMVELARLTSRLSNGEVD 168
E++L++ E+ RL+ R E+E++ E E++RQ+ +RK +ELA + +
Sbjct: 2822 EEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLES 2881
Query: 169 GLVEVALKGLLSGLEKVMKAAD-----CVRLKTLKGILDVLSTK-----QSVDFLAGTSI 218
+V++ L ++++K D + K LK + ++LS K D + +
Sbjct: 2882 DMVKIIKDELTKEKDEIIKNKDIKLRHSLEQKWLKHLQNILSLKIDSLLNKNDEVIKDNE 2941
Query: 219 LQIQMSIRGTKRVQAYVN 236
Q++ +I + + Q Y+N
Sbjct: 2942 TQLKTNILNSLKNQLYLN 2959
>sp|A6TR79|MUTS_ALKMQ DNA mismatch repair protein MutS OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutS PE=3 SV=1
Length = 880
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 142 RQQVALADRKMVELARLTSRLSNGEVDGLVEVALKGLLSGLEKVMKAADCVRLKTLKGIL 201
RQ++ + +K+ +L RL ++S G V +ALK LS L ++ + ++ +T + ++
Sbjct: 343 RQELKESLKKIYDLERLAGKISYGSVTPRDLIALKNSLSYLPSIINGLEKIQGETFQSLV 402
Query: 202 DVLSTKQSVDFLAGTSILQ 220
+ V L SIL+
Sbjct: 403 QSIDPLDEVHSLVELSILE 421
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,606,589
Number of Sequences: 539616
Number of extensions: 2889861
Number of successful extensions: 15865
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 15712
Number of HSP's gapped (non-prelim): 209
length of query: 239
length of database: 191,569,459
effective HSP length: 114
effective length of query: 125
effective length of database: 130,053,235
effective search space: 16256654375
effective search space used: 16256654375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)