BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046620
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2
SV=1
Length = 712
Score = 215 bits (548), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 155/255 (60%), Gaps = 63/255 (24%)
Query: 1 MGNYDCIFDWELQTDGLILI---------------KNLYQVSKPGYMSGPLVCENVIGVV 45
+GNYD IFDWE QTDGLI + N+ + +GPL+ ENVIGVV
Sbjct: 439 VGNYDYIFDWEFQTDGLIRVTVAASGMLMVKGTPYDNVDDLGDREDDAGPLISENVIGVV 498
Query: 46 HDHFITLHLDMDIDG-ANNSFVEVHLEKQETSPGESPRKSYLKIEQC-----------LN 93
HDHFIT HLDMDIDG NNS V+VHLEKQ G+SPRKSYLK+++ L+
Sbjct: 499 HDHFITFHLDMDIDGPMNNSLVKVHLEKQRVPTGKSPRKSYLKVKKYIAKTEKDAQIKLS 558
Query: 94 LYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT---------------ATPSDR 138
LYDP EFH++NP+R+SR+GNP+G++ VPGGNAA+LL + TP +R
Sbjct: 559 LYDPYEFHIVNPNRKSRVGNPAGYRIVPGGNAASLLDHDDPPQIRGAFTNNQIWVTPYNR 618
Query: 139 NEQWAGGLLVYQSREDEALAVWSE-----------MW----------NFNFPVMPTVPSS 177
+EQ+AGG+L+YQS+ D+ L VWS+ +W ++PVMPTV +S
Sbjct: 619 SEQYAGGVLIYQSQGDDTLQVWSDRDRSIENKDIVLWYTLGFHHVPCQEDYPVMPTVAAS 678
Query: 178 FDLEPVNFFHRNPTL 192
F+L+P NFF NP L
Sbjct: 679 FELKPANFFESNPIL 693
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3
Length = 667
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 120/260 (46%), Gaps = 60/260 (23%)
Query: 1 MGNYDCIFDWELQTDGL----ILIKNLYQVSKPGY---------MSGPLVCENVIGVVHD 47
+GNYD + DWE +T G I + + ++ + G LV N IG+ HD
Sbjct: 402 VGNYDNVLDWEFKTSGWMKPSIALSGILEIKGTNIKHKDEIKEEIHGKLVSANSIGIYHD 461
Query: 48 HFITLHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQCLNLYD----------P 97
HF +LD DIDG NSF + L+ G S RKSY E + P
Sbjct: 462 HFYIYYLDFDIDGTQNSFEKTSLKTVRIVDGGSKRKSYWTTETQTAKTESDAKITIGLAP 521
Query: 98 SEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT---------------ATPSDRNEQW 142
+E V+NP+ ++ +GN G++ +P A LL TP +R E+W
Sbjct: 522 AELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTPYNRTEKW 581
Query: 143 AGGLLVYQSREDEALAVWSE-----------MWNF----------NFPVMPTVPSSFDLE 181
AGGL V SR D+ LAVW++ MW+ +FP+MP + +SF+L
Sbjct: 582 AGGLYVDHSRGDDTLAVWTKKNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELR 641
Query: 182 PVNFFHRNPTLR-LPADCFA 200
P NFF RNP L+ LP F
Sbjct: 642 PTNFFERNPVLKTLPPRDFT 661
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1
Length = 674
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 118/254 (46%), Gaps = 63/254 (24%)
Query: 1 MGNYDCIFDWELQTDGLIL---------------IKNLYQVSKPGYMSGPLVCENVIGVV 45
+GNYD + DWE + G I IK+ ++ + + G LV N IG+
Sbjct: 409 VGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKED--LHGKLVSANSIGIY 466
Query: 46 HDHFITLHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQCLNLYD--------- 96
HDHF +LD DIDG +NSF + L+ G S RKSY E +
Sbjct: 467 HDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGL 526
Query: 97 -PSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNTATPS---------------DRNE 140
P+E V+NP+ ++ +GN G++ +P A LL P +R E
Sbjct: 527 APAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTE 586
Query: 141 QWAGGLLVYQSREDEALAVWSE-----------MWNF----------NFPVMPTVPSSFD 179
+WAGGL V SR D+ LAVW++ MW+ +FP+MP + +SF+
Sbjct: 587 KWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFE 646
Query: 180 LEPVNFFHRNPTLR 193
L P NFF RNP L+
Sbjct: 647 LRPTNFFERNPVLK 660
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1
Length = 755
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 76/263 (28%)
Query: 1 MGNYDCIFDWELQTDGLI---------------LIKNLYQVS-KPGYMSGPLVCENVIGV 44
+GNYD IFDW +G I L K ++ S K G L+ N++G
Sbjct: 493 VGNYDYIFDWVFHDNGTIGIDAGATGIEAVKGVLAKTMHDPSAKEDTRYGTLIDHNIVGT 552
Query: 45 VHDHFITLHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQ--------CLNLYD 96
H H LD+D+DG NN+ V + E + + G PR S +++ Q +D
Sbjct: 553 THQHIYNFRLDLDVDGENNTLVAMDPEVKPNTAG-GPRTSTMQVNQYTIDSEQKAAQKFD 611
Query: 97 PSEFHVI-NPSRRSRLGNPSGHKAVP--GGN--AAT--------------------LLRN 131
P ++ N S+ +R+GNP ++ +P GG AAT L
Sbjct: 612 PGTIRLLSNTSKENRMGNPVSYQIIPYAGGTHPAATGAKFAPDEWIYHRLSFMDKQLWVT 671
Query: 132 TATPSDR-------NEQWAGGLLVYQSREDEAL-----AVW----------SEMWNFNFP 169
P++R N L +++DE+L VW +E W P
Sbjct: 672 RYHPTERYPEGKYPNRSAHDTGLGQYAKDDESLTNHDDVVWITTGTTHVARAEEW----P 727
Query: 170 VMPTVPSSFDLEPVNFFHRNPTL 192
+MPT + L+P NFF PTL
Sbjct: 728 IMPTEWALALLKPWNFFDETPTL 750
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1
SV=1
Length = 757
Score = 71.2 bits (173), Expect = 5e-12, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 101/259 (38%), Gaps = 68/259 (26%)
Query: 1 MGNYDCIFDWELQTDGLILI---------------KNLY-QVSKPGYMSGPLVCENVIGV 44
+GNYD IFDW +G I I K ++ + +K G L+ N++G
Sbjct: 493 VGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGT 552
Query: 45 VHDHFITLHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQ--------CLNLYD 96
H H LD+D+DG NNS V + + + G PR S +++ Q +D
Sbjct: 553 THQHIYNFRLDLDVDGENNSLVAMDPVVKPNTAG-GPRTSTMQVNQYNIGNEQDAAQKFD 611
Query: 97 PSEFHVI-NPSRRSRLGNPSGHKAVP-GGNAATLLRNTATPSDR---------------- 138
P ++ NP++ +R+GNP ++ +P G + + D
Sbjct: 612 PGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVT 671
Query: 139 ----NEQWAGGLLVYQSREDEALAVWSE-----------MWNFN----------FPVMPT 173
E++ G +S D L +S+ +W +P+MPT
Sbjct: 672 RYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPT 731
Query: 174 VPSSFDLEPVNFFHRNPTL 192
L+P NFF PTL
Sbjct: 732 EWVHTLLKPWNFFDETPTL 750
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM
4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686)
GN=maoA PE=1 SV=2
Length = 752
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 104/264 (39%), Gaps = 78/264 (29%)
Query: 1 MGNYDCIFDWELQTDGLILI---------------KNLYQVS-KPGYMSGPLVCENVIGV 44
+GNYD IFDW +G I I K ++ S K G L+ N++G
Sbjct: 490 VGNYDYIFDWVFHENGTIGIDAGATGIEAVKGVQAKTMHDPSAKEDTRYGTLIDHNIVGT 549
Query: 45 VHDHFITLHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQ--------CLNLYD 96
H H LD+D+DG NN+ V + E + + G PR S ++I Q +D
Sbjct: 550 THQHIYNFRLDLDVDGENNTLVAMDPEVKPNTAG-GPRTSTMQINQYTIDSEQKAAQKFD 608
Query: 97 PSEFHVI-NPSRRSRLGNPSGHKAVP--GGNAATLLRNTATPSD---------RNEQWA- 143
P ++ N ++ +R+GNP ++ +P GG P + + W
Sbjct: 609 PGTIRLLSNITKENRMGNPVSYQIIPYAGGTHPVATGAKFAPDEWIYHRLSFMDKQLWVT 668
Query: 144 --------------------GGLLVYQSREDEAL-----AVW----------SEMWNFNF 168
GL Y +++DE+L VW +E W
Sbjct: 669 RYHPTERFPEGKYPNRSIHDTGLGQY-AKDDESLDNHDDVVWITTGTTHVARAEEW---- 723
Query: 169 PVMPTVPSSFDLEPVNFFHRNPTL 192
P+MPT + L+P NFF PTL
Sbjct: 724 PIMPTEWAHALLKPWNFFDETPTL 747
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1
SV=1
Length = 648
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 61/252 (24%)
Query: 1 MGNYDCIFDWELQTDGLI--LIKNLYQVSKPGYMSG-------PLVCENVIGVVHDHFIT 51
+ NY+ F W L DG I L+K +S G + G L + + +H H
Sbjct: 382 VANYEYAFYWHLFLDGSIEFLVKATGILSTAGQLPGEKNPYGQSLNNDGLYAPIHQHMFN 441
Query: 52 LHLDMDIDGANNSFVEVHLEKQETSPG-----------ESPRKSYLKIEQCLNLYDPSEF 100
+ +D ++DG N+ EV +E E +P E+ +K+ K + + + +
Sbjct: 442 VRMDFELDGVKNAVYEVDMEYPEHNPTGTAFMAVDRLLETEQKAIRKTNEAKHRF----W 497
Query: 101 HVINPSRRSRLGNPSGHKAVPGGNAATLLRNTA---------------TPSDRNEQWAGG 145
+ N ++ + P ++ +P R+ A T DR E++A G
Sbjct: 498 KIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAG 557
Query: 146 LLVYQSR-EDEALAVWSEM------------WNF---------NFPVMPTVPSSFDLEPV 183
Q+ D+ L +W++ + F ++PVMP F LEP
Sbjct: 558 EYPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPH 617
Query: 184 NFFHRNPTLRLP 195
FF++NPTL LP
Sbjct: 618 GFFNQNPTLNLP 629
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII
PE=1 SV=1
Length = 648
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 61/252 (24%)
Query: 1 MGNYDCIFDWELQTDGLI--LIKNLYQVSKPGYMSG-------PLVCENVIGVVHDHFIT 51
+ NY+ F W L DG I L+K +S G + G L + + +H H
Sbjct: 382 VANYEYAFYWHLFLDGSIEFLVKATGILSTAGQLPGEKNPYGQSLNNDGLYAPIHQHMFN 441
Query: 52 LHLDMDIDGANNSFVEVHLEKQETSPG-----------ESPRKSYLKIEQCLNLYDPSEF 100
+ +D ++DG N+ EV +E E +P E+ +K+ K + + + +
Sbjct: 442 VRMDFELDGVKNAVYEVDMEYPEHNPTGTAFMAVDRLLETEQKAIRKTNEAKHRF----W 497
Query: 101 HVINPSRRSRLGNPSGHKAVPGGNAATLLRNTA---------------TPSDRNEQWAGG 145
+ N ++ + P ++ +P R+ A T DR E++A G
Sbjct: 498 KIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAG 557
Query: 146 LLVYQSR-EDEALAVWSEM------------WNF---------NFPVMPTVPSSFDLEPV 183
Q+ D+ L +W++ + F ++PVMP F LEP
Sbjct: 558 EYPNQATGADDGLHIWTQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPH 617
Query: 184 NFFHRNPTLRLP 195
FF++NPTL LP
Sbjct: 618 GFFNQNPTLNLP 629
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3
Length = 684
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 53/251 (21%)
Query: 1 MGNYDCIFDWELQTDGLILIKN-----LYQVSKPG--YMSGPLVCENVIGVVHDHFITLH 53
+GNYD F W L DG I + ++ + P Y + + H H +
Sbjct: 399 VGNYDYGFYWYLYLDGTIEFEAKATGIVFTAALPDKDYAYASEIAPGLGAPYHQHLFSAR 458
Query: 54 LDMDIDGANNSFVEVHLEKQETSPGE------SPRKSYLKIE-QCLNLYDPSE---FHVI 103
LDM IDG N E+ L + PG + +++ L E + + D ++ +H+
Sbjct: 459 LDMMIDGDANRVEELDLVRLPKGPGNPHGNAFTQKRTLLARESEAVRDADGAKGRVWHIS 518
Query: 104 NPSRRSRLGNPSGHKAVPGGNAATLLRNTATPSDR------------------------- 138
NP + LG+P G+ P GN + + ++ + R
Sbjct: 519 NPDSLNHLGHPVGYTLYPEGNPTLAMADDSSIASRAAFARHHLWVTRHAEEELYAAGDFV 578
Query: 139 NEQWAGGLL---VYQSRE--DEALAVWSEMWNFNFP------VMPTVPSSFDLEPVNFFH 187
N+ G +L V Q R+ + L VW +FP +MP + F L+P FF
Sbjct: 579 NQHPGGAVLPAYVAQDRDIDGQDLVVWHSFGLTHFPRPEDWPIMPVDTTGFTLKPHGFFD 638
Query: 188 RNPTLRLPADC 198
NPTL +P+
Sbjct: 639 ENPTLNVPSSA 649
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1
Length = 638
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 92/251 (36%), Gaps = 55/251 (21%)
Query: 1 MGNYDCIFDWELQTDGLILIKN-----LYQVSKPGYMSGPL--VCENVIGVVHDHFITLH 53
+GNYD F W L DG I + ++ + P S + + + H H +
Sbjct: 379 IGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSAR 438
Query: 54 LDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQCLNLYDPS----------EFHVI 103
LDM IDG N E + +Q PG ++ + L + + +
Sbjct: 439 LDMAIDGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIIS 498
Query: 104 NPSRRSRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQWA-------------------- 143
NP ++RL P G+K + N TLL + + R +A
Sbjct: 499 NPESKNRLNEPVGYK-LHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDF 557
Query: 144 -------GGLLVY--QSR--EDEALAVWSEMWNFNF------PVMPTVPSSFDLEPVNFF 186
GL Y Q R + + + VW +F P+MP F L P FF
Sbjct: 558 VNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFF 617
Query: 187 HRNPTLRLPAD 197
R+P L +PA+
Sbjct: 618 DRSPVLDVPAN 628
>sp|Q12556|AMO1_ASPNG Copper amine oxidase 1 OS=Aspergillus niger GN=AO-I PE=1 SV=2
Length = 671
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 63/256 (24%)
Query: 1 MGNYDCIFDWELQTDGLILIK-------NLYQVSKPGYMS--GPLVCENVIGVVHDHFIT 51
+ NY+ IF ++ G I ++ N+ + G +S G +V V+ H H
Sbjct: 402 LANYEYIFAYKFDQSGGITVESRATGILNVVNIDA-GKVSEYGNVVSGGVLAQNHQHIFC 460
Query: 52 LHLDMDIDGANNSFVEVHLEKQETSPGES---PRKSYLKIE----QCLNLYDPS-----E 99
+ +D IDG NNS V +E+ P + P ++ K+ + +D +
Sbjct: 461 VRIDPAIDGPNNS---VQVEESHPVPMNAVTNPNGNFYKVNTETMERAGFFDAAPELNRT 517
Query: 100 FHVINPSRRSRLG-NPSGHKAVPGGNAATLLRNTATPSDR---------------NEQWA 143
++NP +++ + P G+K +P L + + R E +A
Sbjct: 518 VKMVNPHKKNPISQKPVGYKFIPLATQRLLADPNSIQARRAQFAQHHVWVTKYRDGELYA 577
Query: 144 GGLLVYQSRED----------------EALAVWSEMWNF------NFPVMPTVPSSFDLE 181
GG QS+E+ + VWS ++PVMP +
Sbjct: 578 GGRYTLQSQEEIEGVSDAVKRGDSVVDTDVVVWSTFGITHNPRVEDWPVMPVEIFQLMIR 637
Query: 182 PVNFFHRNPTLRLPAD 197
P +FF NP+L +P+D
Sbjct: 638 PADFFTANPSLDVPSD 653
>sp|Q9TTK6|AOC3_BOVIN Membrane primary amine oxidase OS=Bos taurus GN=AOC3 PE=2 SV=3
Length = 763
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 92/252 (36%), Gaps = 66/252 (26%)
Query: 3 NYDCIFDWELQTDGLILIKNLYQVSKPGYMS-----------GPLVCENVIGVVHDHFIT 51
NYD ++D +G I +K GY+S G V EN +G VH H
Sbjct: 470 NYDYVWDMVFHPNGAIEVK----FHATGYISSAFFFGTAQKYGNQVRENTLGTVHTHSAH 525
Query: 52 LHLDMDIDGANN-------SFV--------------------EVHLEKQETSP--GESPR 82
+D+D+ G N +FV ++ E+Q P G SPR
Sbjct: 526 YKVDLDVGGLENWVWAEDMAFVPTTVPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPR 585
Query: 83 KSYLKIEQCLNLYDPSEFHV--INPSRRSRLGNPSGHKAVPGG--NAATLLRNTATPS-- 136
YL +Q P + + ++ + R N S +A+ G A R PS
Sbjct: 586 YLYLASKQSNKWGHPRGYRIQTVSFAGRPLPQNSSTERAISWGRYQLAVTQRKETEPSSS 645
Query: 137 ---DRNEQWA-----GGLLVYQSREDEALAVWSEMWNFNFPVMPTVPSS--------FDL 180
++N+ W + ++ + L W + P +P++ F L
Sbjct: 646 SVFNQNDPWTPTVDFADFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFL 705
Query: 181 EPVNFFHRNPTL 192
P NFF +P++
Sbjct: 706 RPYNFFDEDPSI 717
>sp|O46406|AOCY_BOVIN Primary amine oxidase, lung isozyme OS=Bos taurus PE=2 SV=1
Length = 762
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 95/252 (37%), Gaps = 66/252 (26%)
Query: 3 NYDCIFDWELQTDGLILIKNLYQVSKPGYMS-----------GPLVCENVIGVVHDHFIT 51
NYD ++D +G I +K + V+ GY+S G V EN +G VH H
Sbjct: 469 NYDYVWDMVFHPNGAIEVK--FHVT--GYISSAFFFGTAQKYGNQVRENTLGTVHTHSAH 524
Query: 52 LHLDMDIDGANN-------SFV--------------------EVHLEKQETSP--GESPR 82
+D+D+ G N +FV ++ E+Q P G SPR
Sbjct: 525 YKVDLDVGGLENWVWAEDMAFVPTTVPWSPEHQIQRLQVIRKQLETEEQAAFPLGGGSPR 584
Query: 83 KSYLKIEQCLNLYDPSEFHV--INPSRRSRLGNPSGHKAVPGG--NAATLLRNTATPS-- 136
YL +Q P + + ++ + R N S +A+ G A R PS
Sbjct: 585 YLYLASKQSNKWGHPRGYRIQTVSFAGRPLPQNSSTERAISWGRYQLAVTQRKETEPSSS 644
Query: 137 ---DRNEQWA-----GGLLVYQSREDEALAVWSEMWNFNFPVMPTVPSS--------FDL 180
++N+ W + ++ + L W + P +P++ F L
Sbjct: 645 SVFNQNDPWTPTVDFADFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFL 704
Query: 181 EPVNFFHRNPTL 192
P NFF + P++
Sbjct: 705 RPYNFFDQEPSM 716
>sp|Q9TRC7|ABP1_PIG Amiloride-sensitive amine oxidase [copper-containing] (Fragments)
OS=Sus scrofa GN=ABP1 PE=1 SV=2
Length = 141
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 40 NVIGVVHDHFITLHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQCLNLYD--- 96
N+IG +H H + +D+D+ G NSF + +E + + SPR ++ Y
Sbjct: 39 NLIGNMHTHLVNYRVDLDVAGTTNSFQTLQMELENITNPWSPRHRLVQPTLKQTRYSRER 98
Query: 97 PSEFHVINPSRRSRL-----GNPSGHKAVP 121
+ F P + L NP GH+AVP
Sbjct: 99 QAAFRFGQPLPKYLLITSPKENPWGHRAVP 128
>sp|P19801|ABP1_HUMAN Amiloride-sensitive amine oxidase [copper-containing] OS=Homo
sapiens GN=ABP1 PE=1 SV=4
Length = 751
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 21/191 (10%)
Query: 3 NYDCIFDWELQTDGLILIK-------NLYQVSKPGYMSGPLVCENVIGVVHDHFITLHLD 55
NYD I+D+ +G++ K + + G G + ++IG +H H + +D
Sbjct: 460 NYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRVD 519
Query: 56 MDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQCLNLYDPSEFHVINPSRR------- 108
+D+ G NSF + ++ + + SPR ++ Y R+
Sbjct: 520 LDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLF 579
Query: 109 -SRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQ---WAG-GLLVYQSREDEALAVWSEM 163
S NP GHK ++ P + EQ WA L V + RE E + S +
Sbjct: 580 TSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCS--SSI 637
Query: 164 WNFNFPVMPTV 174
++ N P P V
Sbjct: 638 YHQNDPWHPPV 648
>sp|O75106|AOC2_HUMAN Retina-specific copper amine oxidase OS=Homo sapiens GN=AOC2 PE=1
SV=2
Length = 756
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 1 MGNYDCIFDWELQTDGLI---------LIKNLYQVSKPGYMSGPLVCENVIGVVHDHFIT 51
+GNYD I+D+ L +G + + + + G + G V E V+G VH H
Sbjct: 462 VGNYDYIWDFVLYPNGALEGRVHATGYINTAFLKGGEEGLLFGNRVGERVLGTVHTHAFH 521
Query: 52 LHLDMDIDGANNSFV 66
LD+D+ G N V
Sbjct: 522 FKLDLDVAGLKNWVV 536
>sp|P36633|ABP1_RAT Amiloride-sensitive amine oxidase [copper-containing] OS=Rattus
norvegicus GN=Abp1 PE=2 SV=1
Length = 746
Score = 37.7 bits (86), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 3 NYDCIFDWELQTDGLILIK-------NLYQVSKPGYMSGPLVCENVIGVVHDHFITLHLD 55
NYD I+D+ ++G++ K + + G G + +++G +H H + +D
Sbjct: 455 NYDYIWDFIFYSNGVMEAKMHATGYVHATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVD 514
Query: 56 MDIDGANNSFVEVHLEKQETSPGESPRKSYLK 87
MD+ G NSF + ++ + + SP S ++
Sbjct: 515 MDVAGTKNSFQTLTMKLENLTNPWSPSHSLVQ 546
>sp|Q812C9|AOC2_MOUSE Retina-specific copper amine oxidase OS=Mus musculus GN=Aoc2 PE=2
SV=2
Length = 757
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 17/75 (22%)
Query: 2 GNYDCIFDWELQTDGLILIKNLYQVSKPGYMS-------------GPLVCENVIGVVHDH 48
GNYD I+D+ L G + + V GY++ G V E V+G VH H
Sbjct: 464 GNYDYIWDFMLHPTGALEAR----VHATGYINTAFMSGGAESLLFGNRVGERVLGAVHTH 519
Query: 49 FITLHLDMDIDGANN 63
LD+D+ G N
Sbjct: 520 AFHFKLDLDVAGLKN 534
>sp|Q16853|AOC3_HUMAN Membrane primary amine oxidase OS=Homo sapiens GN=AOC3 PE=1 SV=3
Length = 763
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 3 NYDCIFDWELQTDGLILIKNLYQVSKPGYMS-----------GPLVCENVIGVVHDHFIT 51
NYD ++D G I I+ GY+S G V E+ +G VH H
Sbjct: 470 NYDYVWDTVFHPSGAIEIR----FYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAH 525
Query: 52 LHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIE---QCLNLYDPSEFHVINPSRR 108
+D+D+ G N + + SP +++ + L + + + F V + + R
Sbjct: 526 FKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPR 585
Query: 109 -----SRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQWAGG-------LLVYQSREDEA 156
S N GH P G +L P +N A G L V Q +E+E
Sbjct: 586 YLYLASNHSNKWGH---PRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEP 642
Query: 157 LAVWSEMWNFNFPVMPTV 174
+ S ++N N P PTV
Sbjct: 643 SS--SSVFNQNDPWAPTV 658
>sp|H2A0M3|AMO_PINMG Putative amine oxidase [copper-containing] OS=Pinctada
margaritifera PE=1 SV=1
Length = 781
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 93/259 (35%), Gaps = 71/259 (27%)
Query: 1 MGNYDCIFDWELQTDGLILIKNLYQVSKPGYMSGPLVCE------------NVIGVVHDH 48
+ NYD D+ +G++ K V GY+ L + +IG +H H
Sbjct: 472 IANYDYTIDFIFHHNGVLQTK----VVPTGYILPSLYTKQNENKYGFRLNNKLIGNLHHH 527
Query: 49 FITLHLDMDIDGANNSF--VEVHLEKQETSPGESPRKSYLKIEQCLNL------------ 94
+D+DI+G +N + +++ L+K + P + + + NL
Sbjct: 528 LFNFKVDIDINGQHNRYETLDIVLDKTSHPVSKKPYDVWYQNKIKHNLRKTEMEALFKYD 587
Query: 95 YDPSEFHVI-NPSRRSRLGNPSGHKAVPGGNAATLL-------------RNTATPSDRNE 140
+D H+ N + +S GN ++ V G + +LL R+ + R E
Sbjct: 588 FDKPMHHIFYNNNLKSPEGNNMAYRLVNRGMSKSLLPECSGNEGTGAWMRHQIAVTKRKE 647
Query: 141 QWAGGLLVY-------------------QSREDEALAVWSEMWNFNFPVMPTVPS----- 176
VY ++ DE L W M ++ P +P
Sbjct: 648 TELTSSSVYSAFGTKNPVVNFRNFYADNENIVDEDLVAWVTMGTYHIPHTEDLPVTHTPG 707
Query: 177 ---SFDLEPVNFFHRNPTL 192
SF L P N+F +P +
Sbjct: 708 LDLSFFLSPFNYFPEDPAM 726
>sp|Q29437|AOCX_BOVIN Primary amine oxidase, liver isozyme OS=Bos taurus PE=1 SV=1
Length = 762
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 81/215 (37%), Gaps = 65/215 (30%)
Query: 1 MGNYDCIFDWELQTDGLILIKNLYQVSKPGYMS-----------GPLVCENVIGVVHDHF 49
M NYD ++D +G I +K + GY+S G V E+ +G VH H
Sbjct: 467 MLNYDYVWDMVFYPNGAIEVK----LHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHS 522
Query: 50 ITLHLDMDIDGANN-------SFV--------------------EVHLEKQETSP--GES 80
+D+D+ G N +FV ++ E+Q P G S
Sbjct: 523 AHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQVTRKQLETEEQAAFPLGGAS 582
Query: 81 PRKSYLKIEQCLNLYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNTATPSDRNE 140
PR YL +Q ++ G+P G++ A + +P +R
Sbjct: 583 PRYLYLASKQS-----------------NKWGHPRGYRIQTVSFAGGPMPQN-SPMERAF 624
Query: 141 QWAG-GLLVYQSREDEALAVWSEMWNFNFPVMPTV 174
W L + Q +E E + S ++N N P PTV
Sbjct: 625 SWGRYQLAITQRKETEPSS--SSVFNQNDPWTPTV 657
>sp|Q8JZQ5|ABP1_MOUSE Amiloride-sensitive amine oxidase [copper-containing] OS=Mus
musculus GN=Abp1 PE=2 SV=1
Length = 751
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 3 NYDCIFDWELQTDGLILIK-------NLYQVSKPGYMSGPLVCENVIGVVHDHFITLHLD 55
NYD I+D+ +G++ K + + G G + +++G +H H + +D
Sbjct: 460 NYDYIWDFIFYPNGVMETKMHATGYVHATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVD 519
Query: 56 MDIDGANNSFVEVHLEKQETSPGESPRKSYLK 87
+D+ G NSF + + + + SP S ++
Sbjct: 520 LDVAGTKNSFRTLKTKLENITNPWSPSHSLVQ 551
>sp|Q9P7F2|CAO1_SCHPO Copper amine oxidase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cao1 PE=1 SV=1
Length = 712
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 167 NFPVMPTVPSSFDLEPVNFFHRNPTLRLP 195
+FP+MP P L P NFF RNP L +P
Sbjct: 633 DFPLMPAEPIRLLLRPRNFFLRNPALDVP 661
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 33.9 bits (76), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 96 DPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQWAGGLLVYQSREDE 155
+P +H++NP RR ++ SG +L T TP DR +Q A ++V + E +
Sbjct: 2010 EPLFYHILNPDRRFKISRTSG-----------VLSTTGTPFDREQQEAFDVVVEVTEEHK 2058
Query: 156 ALA-------VWSEMWNFNFPVMPTVP 175
A V E N N PV +P
Sbjct: 2059 PSAVAHVVVKVIVEDQNDNAPVFVNLP 2085
>sp|Q5R9I0|AOC3_PONAB Membrane primary amine oxidase OS=Pongo abelii GN=AOC3 PE=2 SV=3
Length = 763
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 68/195 (34%), Gaps = 29/195 (14%)
Query: 3 NYDCIFDWELQTDGLILIKNLYQVSKPGYMS-----------GPLVCENVIGVVHDHFIT 51
NYD ++D G I I+ GY+S G V E+ +G VH H
Sbjct: 470 NYDYVWDMVFHPSGAIEIR----FYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAH 525
Query: 52 LHLDMDIDGANNSFVEVHLEKQETSPGESPRKSYLKIEQCLNLYDPSE-----FHVINPS 106
+D+DI G N + + SP +++ L + E P
Sbjct: 526 FKVDLDIAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLETEEQAAFLMGSATPR 585
Query: 107 RRSRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQWAGG-------LLVYQSREDEALAV 159
N S P G +L P +N A G L V Q +E+E +
Sbjct: 586 YLYLASNHSNKWGHPRGYRIQMLSFAGKPLPQNSSMAKGFSWERYQLAVTQRKEEEPSS- 644
Query: 160 WSEMWNFNFPVMPTV 174
S ++N N P TV
Sbjct: 645 -SSVFNQNDPWAATV 658
>sp|O08590|AOC3_RAT Membrane primary amine oxidase OS=Rattus norvegicus GN=Aoc3 PE=1
SV=4
Length = 763
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 3 NYDCIFDWELQTDGLILIK---NLYQVSK----PGYMSGPLVCENVIGVVHDHFITLHLD 55
NYD ++D ++G I +K Y S G G V E+ +G VH H +D
Sbjct: 470 NYDYVWDMVFHSNGAIEVKFHATGYITSAFFFGAGEKFGNRVAEHTLGTVHTHNAHFKVD 529
Query: 56 MDIDGANN 63
+D+ G N
Sbjct: 530 LDVAGLKN 537
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 22/106 (20%)
Query: 94 LYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQWAGGLLVYQSRE 153
L +P ++ ++NP + ++ + SG +++ T P DR EQ L+V SRE
Sbjct: 2010 LNEPLKYSILNPGNKFKIKSTSG-----------VIQTTGVPFDREEQELYELVVEASRE 2058
Query: 154 DEALAVWS-------EMWNFNFPVMPTVP----SSFDLEPVNFFHR 188
+ L V E N N PV +P D EP +R
Sbjct: 2059 LDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTLIYR 2104
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 22/106 (20%)
Query: 94 LYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNTATPSDRNEQWAGGLLVYQSRE 153
L +P ++ ++NP + ++ + SG +++ T P DR EQ L+V SRE
Sbjct: 2010 LNEPLKYSILNPGNKFKIKSTSG-----------VIQTTGVPFDREEQELYELVVEASRE 2058
Query: 154 DEALAVWS-------EMWNFNFPVMPTVP----SSFDLEPVNFFHR 188
+ L V E N N PV +P D EP +R
Sbjct: 2059 LDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTLIYR 2104
>sp|O70423|AOC3_MOUSE Membrane primary amine oxidase OS=Mus musculus GN=Aoc3 PE=2 SV=3
Length = 765
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 15/72 (20%)
Query: 3 NYDCIFDWELQTDGLILIKNLYQVSKPGYMS-----------GPLVCENVIGVVHDHFIT 51
NYD I+D +G I +K GY+S G V + +G VH H
Sbjct: 470 NYDYIWDMVFHPNGAIEVK----FHATGYISSAFFFGAGEKFGNRVGAHTLGTVHTHSAH 525
Query: 52 LHLDMDIDGANN 63
+D+D+ G N
Sbjct: 526 FKVDLDVAGLKN 537
>sp|Q7G9P4|ALDO3_ARATH Abscisic-aldehyde oxidase OS=Arabidopsis thaliana GN=AAO3 PE=1 SV=1
Length = 1332
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 151 SREDEALAVWSEMWNFNFPVMPTVPSSFDLEPVNF-FHRNPTLRLPA 196
+ +++ L V W++ P + T+P F++E VN H+N L A
Sbjct: 1215 TTDEKGLVVQQGTWDYKIPTVDTIPKHFNVEIVNTGHHKNRVLSSKA 1261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,438,221
Number of Sequences: 539616
Number of extensions: 4098064
Number of successful extensions: 7212
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 7146
Number of HSP's gapped (non-prelim): 46
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)