Query 046620
Match_columns 219
No_of_seqs 113 out of 643
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 04:06:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sxx_A Peroxisomal primary ami 100.0 1.6E-63 5.5E-68 482.5 18.7 206 1-206 402-669 (692)
2 3loy_A Copper amine oxidase; T 100.0 1.2E-63 4.1E-68 480.4 17.6 198 1-198 382-633 (633)
3 1ksi_A Copper amine oxidase; P 100.0 7.8E-63 2.7E-67 476.7 19.6 197 1-198 379-635 (642)
4 1w6g_A Phenylethylamine oxidas 100.0 9E-63 3.1E-67 475.9 17.1 199 1-200 377-629 (646)
5 3pgb_A Putative uncharacterize 100.0 5.6E-60 1.9E-64 461.9 12.6 198 1-198 481-737 (797)
6 3hi7_A Amiloride-sensitive ami 100.0 2.9E-59 1E-63 455.3 15.0 197 1-198 438-694 (731)
7 1tu5_A Copper amine oxidase, l 100.0 4.7E-59 1.6E-63 455.4 11.5 193 1-197 451-705 (746)
8 1spu_A Copper amine oxidase; o 100.0 3.6E-58 1.2E-62 449.8 14.3 195 1-198 463-726 (727)
9 1w7c_A Lysyl oxidase; AMNE oxi 100.0 6.9E-58 2.4E-62 446.9 15.5 196 1-197 435-692 (747)
10 2brj_A Arabidopsis thaliana ge 54.5 9.9 0.00034 31.0 3.4 59 4-65 85-153 (188)
11 1uww_A Endoglucanase; carbohyd 21.8 76 0.0026 25.6 3.5 60 2-61 84-154 (191)
12 4h6b_A Allene oxide cyclase; B 20.5 78 0.0027 25.8 3.3 46 3-51 92-143 (195)
No 1
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=100.00 E-value=1.6e-63 Score=482.53 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=184.3
Q ss_pred CcccceeeeEEEccCCceEEE--Eeecc-----C-CC-CCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeE
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQV-----S-KP-GYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLE 71 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~-----~-~~-~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~ 71 (219)
||||||||+|+|||||+||+| .|+++ . ++ +.+||++|+|+++|++|||+|||||||||||.+|||+++|++
T Consensus 402 VgNYDYif~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~ 481 (692)
T 3sxx_A 402 AANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAK 481 (692)
T ss_dssp ETTEEEEEEEEECTTSCEEEEEEEEECCCCEECCTTCCCTTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEE
T ss_pred ccceeEEEEEEEecCCeEEEEEEEEEEEEeeeeCCCcccCCCcceecCCccccceeEEEEEEeccccCCCCceEEEEEeE
Confidence 699999999999999999999 55554 2 34 479999999999999999999999999999999999999999
Q ss_pred EecCC--CCCCCCcceEEEEe-----------ecCCCCCcEEEEecCCCCCCC-CCCeeEEEecCCCcccCCCCC-----
Q 046620 72 KQETS--PGESPRKSYLKIEQ-----------CLNLYDPSEFHVINPSRRSRL-GNPSGHKAVPGGNAATLLRNT----- 132 (219)
Q Consensus 72 ~~~~~--~~~~p~~~~~~~e~-----------~~~~~~~r~~~vvN~~~~N~~-G~p~gYkl~p~~~~~~l~~~~----- 132 (219)
+++.. .+.||+++.++.++ +++..++|+|+|+|++++|++ |+|+||||+|++++.+|+.++
T Consensus 482 ~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~~sG~pvgYkL~p~~~~~ll~~~~s~~~~ 561 (692)
T 3sxx_A 482 SSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAK 561 (692)
T ss_dssp ECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCTTTCSCCEEEEECCCCCCCCSCTTSHHHH
T ss_pred EccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCccceEEEecCCCCcccCCCCchhhh
Confidence 99875 34688888887665 455567999999999999999 999999999998887777666
Q ss_pred ----------CCcCCCCCCCCCCCCCCCCCCC--chHhhHh-h-----------hhc----------CCCCCccccccee
Q 046620 133 ----------ATPSDRNEQWAGGLLVYQSRED--EALAVWS-E-----------MWN----------FNFPVMPTVPSSF 178 (219)
Q Consensus 133 ----------VT~y~d~E~~asg~y~~qs~~~--~~l~~Wv-~-----------vwh----------ED~Pvmp~~~~gf 178 (219)
||+|+|+|+||||+|++|+.++ +||..|+ + +|| |||||||++++||
T Consensus 562 ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~gf 641 (692)
T 3sxx_A 562 RAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITL 641 (692)
T ss_dssp HCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEEE
T ss_pred hchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCceEEEEecCcccCCchhcCCCCcceEEEE
Confidence 9999999999999999999876 8999999 4 674 9999999999999
Q ss_pred eEeecCCCCCCCccCCCCCcccccccee
Q 046620 179 DLEPVNFFHRNPTLRLPADCFAISFHWL 206 (219)
Q Consensus 179 ~L~P~nFFd~nPs~d~p~~~~~~~~~~~ 206 (219)
+|||+|||++||+||+|++.+..+++++
T Consensus 642 ~LrP~nFFd~NPaldvp~~~~~~~~~v~ 669 (692)
T 3sxx_A 642 MLRPRHFFTENPGLDIQPSYAMTTSEAK 669 (692)
T ss_dssp EEEEESSSSSCTTTTSCCSEEECHHHHH
T ss_pred EEECCCcCCCCCcccCCCcccccChhhh
Confidence 9999999999999999999777776654
No 2
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=100.00 E-value=1.2e-63 Score=480.44 Aligned_cols=198 Identities=24% Similarity=0.404 Sum_probs=179.7
Q ss_pred CcccceeeeEEEccCCceEEE--Eeecc-----C-CCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeEE
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQV-----S-KPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLEK 72 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~-----~-~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~~ 72 (219)
||||||||+|+|||||+||+| .|+++ + +++.+||++|+|+++|++|||+|||||||||||.+|||+++|+++
T Consensus 382 VgNYdYif~w~F~~dG~Ie~ev~aTGil~t~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~ 461 (633)
T 3loy_A 382 VANAEYMLNIIFDQAGEIRIHVRATGILSTMPLDKDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVVFDDVIR 461 (633)
T ss_dssp ETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTTCCCTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEE
T ss_pred ccceeEEEEEEEecCCeEEEEEEEEEEEeeeecCCcccCCCcceecCCccccceeEEEEEEecccccCCCCEEEEEeeee
Confidence 699999999999999999999 55544 3 466899999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCcceEEEEe---------ecCCCCCcEEEEecCCCCCCC-CCCeeEEEecCCCcccCCCCC----------
Q 046620 73 QETSPGESPRKSYLKIEQ---------CLNLYDPSEFHVINPSRRSRL-GNPSGHKAVPGGNAATLLRNT---------- 132 (219)
Q Consensus 73 ~~~~~~~~p~~~~~~~e~---------~~~~~~~r~~~vvN~~~~N~~-G~p~gYkl~p~~~~~~l~~~~---------- 132 (219)
++.+...||.++.+++++ +++..++|+|+|+|++++|++ |+|+||||+|++++.+|+.++
T Consensus 462 ~~~~~~~nP~g~~~~~~~t~l~~ea~~~~~~~~~r~~~i~N~~~~N~~~G~p~gYkl~p~~~~~ll~~~~s~~~~Ra~fa 541 (633)
T 3loy_A 462 MEKNTKLNPYNVGFVTERTVVEKPGYVEQSPFTNRSYKIINENKINPISKKPVAYKIMMPARQMLLADEDSYNNKRAQFA 541 (633)
T ss_dssp CCSSSSSSTTSCCEEEEEEECCSSEEECCCGGGTCEEEEEEEEEECTTTCSEEEEEEECCCCCCCCSCSSSHHHHHCGGG
T ss_pred cCCCCCCCCCCcceEEEEEEeccccccccCCCCccEEEEECCCCcCCCCCccceEEEccCCCCcccCCCCchhhhccchh
Confidence 998777899998887766 455567999999999999996 999999999998888887776
Q ss_pred -----CCcCCCCCCCCCCCCCCCCCCCchHhhHhh-----------hhc----------CCCCCcccccceeeEeecCCC
Q 046620 133 -----ATPSDRNEQWAGGLLVYQSREDEALAVWSE-----------MWN----------FNFPVMPTVPSSFDLEPVNFF 186 (219)
Q Consensus 133 -----VT~y~d~E~~asg~y~~qs~~~~~l~~Wv~-----------vwh----------ED~Pvmp~~~~gf~L~P~nFF 186 (219)
||+|+|+|+||||+|++|+.++++|..|++ +|| |||||||+++.||+|||+|||
T Consensus 542 ~~~lwVT~y~d~E~~aag~y~nQs~~~~gl~~w~~~~e~i~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~~f~LrP~nFF 621 (633)
T 3loy_A 542 TQQVWVTKYRDNELYAAGEFTNQSQTDTGLGVWARRDENVRNDNPVVWATLGFTHIPRVEDFPVMPVEAHEIALVPFGFF 621 (633)
T ss_dssp GSSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHTTCCCCCTTBCEEEEEEEEEEECCCGGGCSSEEEEEEEEEEEEESSS
T ss_pred hcceEEecCCCCccccCCCCccCCCCCCChHHHhcCCCccccCceEEEEecCcccCCCcccCCCCccceeeEEEEcCCcC
Confidence 999999999999999999887788888884 664 999999999999999999999
Q ss_pred CCCCccCCCCCc
Q 046620 187 HRNPTLRLPADC 198 (219)
Q Consensus 187 d~nPs~d~p~~~ 198 (219)
++||+||||+++
T Consensus 622 d~nP~ldvp~s~ 633 (633)
T 3loy_A 622 DKNPALSVPQST 633 (633)
T ss_dssp SSCGGGGSCCCC
T ss_pred CCCccccCCCCC
Confidence 999999999973
No 3
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=100.00 E-value=7.8e-63 Score=476.68 Aligned_cols=197 Identities=41% Similarity=0.726 Sum_probs=180.3
Q ss_pred CcccceeeeEEEccCCceEEE--EeeccC-----------CCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEE
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQVS-----------KPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVE 67 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~~-----------~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~ 67 (219)
||||||||+|+|||||+||+| .|+++. +++.+|||+|+|+++|++|||+|||||||||||.+|||++
T Consensus 379 V~NYdYif~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~ 458 (642)
T 1ksi_A 379 VGNADNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEK 458 (642)
T ss_dssp ETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEE
T ss_pred ecccceEEEEEEecCceEEEEEEEEEEEEecccccccccccccCCCcceecCCcccccceEEEEEeeccCCCCCCCeEEE
Confidence 699999999999999999999 555553 1246899999999999999999999999999999999999
Q ss_pred EEeEEecCCCCCCCCcceEEEEe-----------ecCCCCCcEEEEecCCCCCCCCCCeeEEEecCCCcccCCCCC----
Q 046620 68 VHLEKQETSPGESPRKSYLKIEQ-----------CLNLYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT---- 132 (219)
Q Consensus 68 ~~~~~~~~~~~~~p~~~~~~~e~-----------~~~~~~~r~~~vvN~~~~N~~G~p~gYkl~p~~~~~~l~~~~---- 132 (219)
+++++++.+.++||++++++.++ +++.. +|+|+|+|++++|++|+|+||||+|++++++|+.++
T Consensus 459 ~~~~~~~~~~~~np~~~~~~~~~t~~~tE~ea~~~~~~~-~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~ 537 (642)
T 1ksi_A 459 TSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLA-PAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQ 537 (642)
T ss_dssp EEEEEEECCSSCSSCSEEEEEEEEECCBGGGGCBCTTSS-CEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSCTTSHHH
T ss_pred EeeEecCCCCCCCCCcceEEEEEEEccchhhhhhccCCC-ceEEEEEcCCCcCCCCCeeeEEEccCCcccccCCCcchhh
Confidence 99999998878899988887665 45666 999999999999999999999999999988888865
Q ss_pred -----------CCcCCCCCCCCCCCCCCCCCCCchHhhHhh-----------hhc----------CCCCCcccccceeeE
Q 046620 133 -----------ATPSDRNEQWAGGLLVYQSREDEALAVWSE-----------MWN----------FNFPVMPTVPSSFDL 180 (219)
Q Consensus 133 -----------VT~y~d~E~~asg~y~~qs~~~~~l~~Wv~-----------vwh----------ED~Pvmp~~~~gf~L 180 (219)
||+|+|+|+||||+|++|+.++++|+.|++ +|| |||||||+++.||+|
T Consensus 538 ~Ra~fa~~~lwVT~y~d~E~~a~g~y~~qs~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~ED~PvMp~~~~~f~L 617 (642)
T 1ksi_A 538 IRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFEL 617 (642)
T ss_dssp HHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEECEE
T ss_pred hhhhccccceEEecCCCCccCCCCCCccCCCCCCChhhhhhCCCccccCCcEEEEecccccCCChhhCCCCccceEEEEE
Confidence 999999999999999999998889999986 674 999999999999999
Q ss_pred eecCCCCCCCccCCCCCc
Q 046620 181 EPVNFFHRNPTLRLPADC 198 (219)
Q Consensus 181 ~P~nFFd~nPs~d~p~~~ 198 (219)
||+|||++||+||+|++.
T Consensus 618 ~P~nFF~~nP~ldvp~~~ 635 (642)
T 1ksi_A 618 RPTNFFERNPVLKTLSPR 635 (642)
T ss_dssp EESSCSSSCTTTTCCCCC
T ss_pred EeCCCCCCCCCccCCCCc
Confidence 999999999999999985
No 4
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=100.00 E-value=9e-63 Score=475.93 Aligned_cols=199 Identities=26% Similarity=0.398 Sum_probs=178.5
Q ss_pred CcccceeeeEEEccCCceEEE--Eeecc-----CCCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeEEe
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQV-----SKPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLEKQ 73 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~-----~~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~~~ 73 (219)
||||||||+|+|||||+||+| .|+++ +.++.+||++|+|+++|++|||+|+|||||||||.+|||++++++++
T Consensus 377 v~NYdYi~~w~F~~dG~Ie~ev~aTGil~t~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~ 456 (646)
T 1w6g_A 377 IGNADYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQ 456 (646)
T ss_dssp ETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTTCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEC
T ss_pred ccccceEEEEEEecCCeEEEEEEEEEEEeeeecCCccCCCcceecCCcccccceEEEEEeecccccCCCCEEEEEeeEec
Confidence 699999999999999999999 45544 34567999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcceEEEEe-----------ecCCCCCcEEEEecCCCCCCCCCCeeEEEecCCCcccCCCCC----------
Q 046620 74 ETSPGESPRKSYLKIEQ-----------CLNLYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT---------- 132 (219)
Q Consensus 74 ~~~~~~~p~~~~~~~e~-----------~~~~~~~r~~~vvN~~~~N~~G~p~gYkl~p~~~~~~l~~~~---------- 132 (219)
+.+ +.||+++.++.++ +++..++|+|+|+|++++|++|+|+||||+|++++.+|+.++
T Consensus 457 ~~~-~~np~~~~~~~~~t~~~tE~ea~~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~~~~~~~~l~~~~s~~~~ra~fa 535 (646)
T 1w6g_A 457 TMG-PGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFA 535 (646)
T ss_dssp CSB-TTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHHHHTGGG
T ss_pred cCC-CCCCCCceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCeeeEEEccCCcccccCCCCcccccccccc
Confidence 876 4788888777665 345567999999999999999999999999999988888866
Q ss_pred -----CCcCCCCCCCCCCCCCCCCCCCchHhhHhh-----------hhc----------CCCCCcccccceeeEeecCCC
Q 046620 133 -----ATPSDRNEQWAGGLLVYQSREDEALAVWSE-----------MWN----------FNFPVMPTVPSSFDLEPVNFF 186 (219)
Q Consensus 133 -----VT~y~d~E~~asg~y~~qs~~~~~l~~Wv~-----------vwh----------ED~Pvmp~~~~gf~L~P~nFF 186 (219)
||+|+|+|+||||+|++|+.+++||..|++ +|| |||||||+++.||+|||+|||
T Consensus 536 ~~~lwVT~y~d~E~~aag~y~nQs~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~PvMP~~~~~f~L~P~nFF 615 (646)
T 1w6g_A 536 TKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFF 615 (646)
T ss_dssp GSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEESSCS
T ss_pred ccceEEeccCCCccccCCCCcccCCCCCChhHHhhCCCCcccCceEEEEeCccccCCCccccCCCCCceEEEEEEecCcC
Confidence 999999999999999999988888888985 674 999999999999999999999
Q ss_pred CCCCccCCCCCccc
Q 046620 187 HRNPTLRLPADCFA 200 (219)
Q Consensus 187 d~nPs~d~p~~~~~ 200 (219)
++||+||+|++.+.
T Consensus 616 ~~nP~ldvp~~~~~ 629 (646)
T 1w6g_A 616 DRSPVLDVPANPSQ 629 (646)
T ss_dssp SSCTTTTCCCC---
T ss_pred CCCCCccCCCcccc
Confidence 99999999999654
No 5
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=100.00 E-value=5.6e-60 Score=461.92 Aligned_cols=198 Identities=21% Similarity=0.354 Sum_probs=170.3
Q ss_pred CcccceeeeEEEccCCceEEE--EeeccC----CCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeEEec
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQVS----KPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLEKQE 74 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~~----~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~~~~ 74 (219)
||||||||+|+|||||+||+| .|++++ .++.+||++|+|+++|++|||+|||||||||||.+|||+++++++++
T Consensus 481 VgNYDYif~w~F~qdGsIe~eVraTGiLst~~~~~~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~ 560 (797)
T 3pgb_A 481 IGNADYMFSYNFHMDGTIGVEVRASGYIQSAYYANNQDFGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVT 560 (797)
T ss_dssp ETTEEEEEEEEECTTSCEEEEEEEEECCCCEECTTCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEE
T ss_pred eccccEEEEEEEecCCeEEEEEEEEEEEEecccCCCCCccceecCCccccccceEEEEeeccCCCCCCCeEEEEeeEEcc
Confidence 799999999999999999999 555543 23579999999999999999999999999999999999999999998
Q ss_pred CCCCCCC--CcceEEEEe-----------ecCCCCCcEEEEecCCCCCCCCCCeeEEEecCCCcccCCCCC---------
Q 046620 75 TSPGESP--RKSYLKIEQ-----------CLNLYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT--------- 132 (219)
Q Consensus 75 ~~~~~~p--~~~~~~~e~-----------~~~~~~~r~~~vvN~~~~N~~G~p~gYkl~p~~~~~~l~~~~--------- 132 (219)
...++++ +++.++.++ +++..++|+|+|+|++++|++|+|+||||+|++++.+|+.++
T Consensus 561 ~~~p~~p~~~~n~~~~~~t~l~tE~eA~~~~~~~~~r~~~ivN~~~~N~~G~pvgYkL~p~~~~~~L~~~~s~~~~rra~ 640 (797)
T 3pgb_A 561 KQFSWSGNKTRNTMQLGRSFIHSEDEARLNWGFNGQTQLHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAH 640 (797)
T ss_dssp EECTTTTTCEEEEEEEEEEECCBGGGCEECCCGGGCEEEEEEEEEEECTTSCEEEEEEECSSCCCCCCCSSCTTTTTTTG
T ss_pred CCCCCCCCcccceeEEEEEEccchhhhhhhcCCCCCceEEEeCCCCcCCCCCeeeEEEccCCCCccccCCCchhhhhhch
Confidence 7666665 356665554 344457999999999999999999999999997766666443
Q ss_pred -------CCcCCCCCCCCCCCCCCCCC----------------CCchHhhHhh--hhc----CCCCC--cccccceeeEe
Q 046620 133 -------ATPSDRNEQWAGGLLVYQSR----------------EDEALAVWSE--MWN----FNFPV--MPTVPSSFDLE 181 (219)
Q Consensus 133 -------VT~y~d~E~~asg~y~~qs~----------------~~~~l~~Wv~--vwh----ED~Pv--mp~~~~gf~L~ 181 (219)
||+|+|+|+||||+|++|+. .++|||+|++ ++| ||||| ||++.+||+||
T Consensus 641 fa~~~lwVT~y~d~E~~aaG~y~~qs~~~~~v~~~~~~~nesI~neDiVlW~t~G~~HiPr~ED~Pvt~MP~e~~gf~Lr 720 (797)
T 3pgb_A 641 WAEYDVQVTRQHDFEPTSAHPYNSQDIHNPPVDFSTFFNGESLNQTDLVVWLNLGMHHVPHTGDLPNTVFTTAHSGVAFT 720 (797)
T ss_dssp GGGCSEEEEECCTTCCCSCCTTGGGCTTSCSCCGGGGCSCCBCSSEEEEEEEEEEEEECCCGGGSSCBCTTTSEEEEEEE
T ss_pred hhhCceEEecCCCCccCCCCCCcccCCCCCccchhhhcCCCccccCceEEEEecccccCCChhhCCCccCCcceeEEEEE
Confidence 99999999999999988754 3456777776 445 99999 99999999999
Q ss_pred ecCCCCCCCccCCCCCc
Q 046620 182 PVNFFHRNPTLRLPADC 198 (219)
Q Consensus 182 P~nFFd~nPs~d~p~~~ 198 (219)
|+|||++||+||+|.+.
T Consensus 721 P~nFFd~NPald~~~~v 737 (797)
T 3pgb_A 721 PLNYLPGDPSRETVNMV 737 (797)
T ss_dssp EESCSSSCGGGGCSCEE
T ss_pred cCCCCCCCccccCccce
Confidence 99999999999999984
No 6
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=100.00 E-value=2.9e-59 Score=455.31 Aligned_cols=197 Identities=21% Similarity=0.345 Sum_probs=168.2
Q ss_pred CcccceeeeEEEccCCceEEE--Eeecc-----CCCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeEEe
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQV-----SKPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLEKQ 73 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~-----~~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~~~ 73 (219)
||||||||+|+|||||+||+| .|+++ ++++.+||++|+|+++|++|||+|||||||||||.+|||++++++++
T Consensus 438 VgNYDYif~w~F~qdGsIe~eVraTGilst~~~~~~~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~ 517 (731)
T 3hi7_A 438 VYNADYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLE 517 (731)
T ss_dssp SSSEEEEEEEEECTTSCEEEEEEEEECCCEEECCGGGGGSEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEE
T ss_pred cccccEEEEEEEecCCeEEEEEEEEEEEeecccCCCCCCCcceecCCcccccceeEEEEEeccccCCCCCEEEEEeceec
Confidence 799999999999999999999 44444 34457999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcc--eEEE-------Ee----ecCCCCCcEEEEecCCCCCCCCCCeeEEEecCCCcccCCCCC--------
Q 046620 74 ETSPGESPRKS--YLKI-------EQ----CLNLYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT-------- 132 (219)
Q Consensus 74 ~~~~~~~p~~~--~~~~-------e~----~~~~~~~r~~~vvN~~~~N~~G~p~gYkl~p~~~~~~l~~~~-------- 132 (219)
+.+.+++++.. .++. |+ +++..++|+|+|+|+ ++|++|+|+||||+|++.+.+++.++
T Consensus 518 ~~~nP~~~~~~~~~~~~~~t~l~tE~ea~~~~~~~~~R~~~i~N~-~~N~~G~pvgYkl~p~~~~~~~l~~~s~~~rra~ 596 (731)
T 3hi7_A 518 NITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSP-QENPWGHKRSYRLQIHSMADQVLPPGWQEEQAIT 596 (731)
T ss_dssp EEECTTCTTSEEEEEEEEEEEECBGGGGCBCTTSCCCSEEEEEEE-EECTTSCEEEEEEEEECCCCCCSCTTSGGGGGGG
T ss_pred CCCCCCCCCccceeEEEEEEEccchhhhhhccCCCCceEEEEeCC-CcCCCCCceeEEEccCCccccccCCcchhhhhch
Confidence 87767777642 2333 32 456678999999999 99999999999999987655555554
Q ss_pred -------CCcCCCCCCCCCCCCCCCCCCC--chHhhHhh-----------hhc----------CCCCCc--ccccceeeE
Q 046620 133 -------ATPSDRNEQWAGGLLVYQSRED--EALAVWSE-----------MWN----------FNFPVM--PTVPSSFDL 180 (219)
Q Consensus 133 -------VT~y~d~E~~asg~y~~qs~~~--~~l~~Wv~-----------vwh----------ED~Pvm--p~~~~gf~L 180 (219)
||+|+|+|+||||+|++|+.++ .||..|++ +|| |||||| |++.+||+|
T Consensus 597 fa~~~lwVT~y~d~E~~aag~y~~~s~~~~~~gl~~w~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMptp~e~~~f~L 676 (731)
T 3hi7_A 597 WARYPLAVTKYRESELCSSSIYHQNDPWDPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLL 676 (731)
T ss_dssp GGGCSEEEEECCGGGSCSCCTTTTTCSSSCSCCTTHHHHTCCBCSSEEEEEEEEEEEEECCCGGGSSCBCSTTCEEEEEE
T ss_pred hcccceEEecCCCCccCCCccccccCCCCCCCCHHHHhhCCCceecCceEEEEecccccCCChhhcCccccccceeEEEE
Confidence 9999999999999999887643 46777774 563 999999 558999999
Q ss_pred eecCCCCCCCccCCCCCc
Q 046620 181 EPVNFFHRNPTLRLPADC 198 (219)
Q Consensus 181 ~P~nFFd~nPs~d~p~~~ 198 (219)
||+|||++||+||++++.
T Consensus 677 rP~nFFd~nPalds~~~v 694 (731)
T 3hi7_A 677 RPFNFFPEDPSLASRDTV 694 (731)
T ss_dssp EEESSSSSCGGGGCTTCE
T ss_pred EccCCCCCCccccCcceE
Confidence 999999999999999985
No 7
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=100.00 E-value=4.7e-59 Score=455.36 Aligned_cols=193 Identities=20% Similarity=0.297 Sum_probs=162.3
Q ss_pred CcccceeeeEEEccCCceEEE--Eeecc-----CCCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeEEe
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQV-----SKPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLEKQ 73 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~-----~~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~~~ 73 (219)
||||||||+|+|||||+||++ .|+.+ ..++.+||++|+|+++|++|||+|+|||||||||.+|||++++++++
T Consensus 451 VgNYdYi~~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~ 530 (746)
T 1tu5_A 451 MLNADYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFV 530 (746)
T ss_dssp ETTEEEEEEEEECTTSCEEEEEEEEECCCCEECCTTGGGGEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEE
T ss_pred ecccceEEEEEEecCCcEEEEEEecceEeeeecCCCCCCCcceecCCccccccceEEEEEecccccCCCCEEEEEeeEEc
Confidence 699999999999999999999 44444 34457999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCcce-----EEEEe-----------ecCCCCCcEEEEecCCCCCCCCCCeeEEEecCCCcccCCCCC-----
Q 046620 74 ETSPGESPRKSY-----LKIEQ-----------CLNLYDPSEFHVINPSRRSRLGNPSGHKAVPGGNAATLLRNT----- 132 (219)
Q Consensus 74 ~~~~~~~p~~~~-----~~~e~-----------~~~~~~~r~~~vvN~~~~N~~G~p~gYkl~p~~~~~~l~~~~----- 132 (219)
+.+ ||.++. ++.++ +++..++|+| |+|++++|++|+|+||||+|++++.+|+.++
T Consensus 531 ~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~r~~-ivn~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ 606 (746)
T 1tu5_A 531 PTA---IPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYL-YLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMER 606 (746)
T ss_dssp EEE---ETTEEEEEEEEEEEEEEECCBGGGGEEETTSCCCSEE-EEEEEEECTTSCEEEEEEEEECBCCCCCCTTSTTGG
T ss_pred ccC---CCCCcccccceeEEEEEEeeehhhhccccCCCCceEE-EeCCCCcCCCCCcceEEECcCCcccccCCCcchhhc
Confidence 865 555544 44443 4666789999 9999999999999999999999988888877
Q ss_pred ----------CCcCCCCCCCCCCCCCCCCC----------------CCchHhhHhh--hhc----CCCCCc--cccccee
Q 046620 133 ----------ATPSDRNEQWAGGLLVYQSR----------------EDEALAVWSE--MWN----FNFPVM--PTVPSSF 178 (219)
Q Consensus 133 ----------VT~y~d~E~~asg~y~~qs~----------------~~~~l~~Wv~--vwh----ED~Pvm--p~~~~gf 178 (219)
||+|+|+|+||||+|++++. .++|||+|++ ++| |||||| |+++.||
T Consensus 607 ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvM~tp~~~~gf 686 (746)
T 1tu5_A 607 AFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGF 686 (746)
T ss_dssp GGGGGGEEEEEEECCTTCCCSSCTTTTTCTTSCSCCGGGGCSCCBCSSEEEEEEEEEEEEECCCGGGSSCBCCCSCCEEE
T ss_pred cccccccceEEeccCCCcccCCccccccCCCCCCccHhhhcCCCCccCCceEEEEecccccCCChhccCccCCCccEEEE
Confidence 99999999999999966543 2334555555 334 999999 7899999
Q ss_pred eEeecCCCCCCCccCCCCC
Q 046620 179 DLEPVNFFHRNPTLRLPAD 197 (219)
Q Consensus 179 ~L~P~nFFd~nPs~d~p~~ 197 (219)
+|||+|||++||+||+|++
T Consensus 687 ~LrP~nFF~~nP~ld~p~~ 705 (746)
T 1tu5_A 687 FLRPYNFFDQEPSMDSADS 705 (746)
T ss_dssp EEEEESSSSSSCCCC----
T ss_pred EEEeCCCCCCCCcccCCCc
Confidence 9999999999999999998
No 8
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=100.00 E-value=3.6e-58 Score=449.84 Aligned_cols=195 Identities=30% Similarity=0.508 Sum_probs=168.0
Q ss_pred CcccceeeeEEEccCCceEEE--EeeccC----------C----CCCCCCCccccCcccccceeEEeeeeecccCCCCCe
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQVS----------K----PGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNS 64 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~~----------~----~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Ns 64 (219)
||||||||+|+|||||+||+| .|+.+. + ++.+||++|+|+++|++|||+|||||||||||.+||
T Consensus 463 v~NYdYi~~w~F~~dG~I~~ev~aTGil~~~~~~~t~~~~~~~~~~~~yGt~v~~~~~a~~HqH~f~~RlD~dVdG~~Ns 542 (727)
T 1spu_A 463 VGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNS 542 (727)
T ss_dssp ETTEEEEEEEEEETTSCEEEEEEEEECCCEEECSCSSTTSTTHHHHTTTEEEEETTEEEECEEEEEEEEEEECTTSSEEE
T ss_pred ecccceEEEEEEecCceEEEEEEEEEEEEeccccccccccccccccCCCcceecCCcccccceeEEEEeecccccCCCCe
Confidence 699999999999999999999 555542 1 236899999999999999999999999999999999
Q ss_pred EEEEEeEEecCCCCCCCCcceEEEEe-----------ecCCCCCcEEEEecCCCCCCCCCCeeEEEecC--CC----ccc
Q 046620 65 FVEVHLEKQETSPGESPRKSYLKIEQ-----------CLNLYDPSEFHVINPSRRSRLGNPSGHKAVPG--GN----AAT 127 (219)
Q Consensus 65 v~~~~~~~~~~~~~~~p~~~~~~~e~-----------~~~~~~~r~~~vvN~~~~N~~G~p~gYkl~p~--~~----~~~ 127 (219)
|+++|+++++.+ +.||+++.++.++ +++..++|+ |+|++++|++|+|+||||+|. .+ +.+
T Consensus 543 v~~~d~~~~~~~-~~np~~~~~~~~~t~~~tE~~a~~~~~~~~~r~--i~n~~~~N~~G~p~gYkl~~~~~~~~~~~~~~ 619 (727)
T 1spu_A 543 LVAMDPVVKPNT-AGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRL--LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGA 619 (727)
T ss_dssp EEEEEEEEEECC-SCSSCSEEEEEEEEEECBHHHHSBCCCTTSEEE--EEEEEEECTTSCEEEEEEEEEEEESSCBCCSC
T ss_pred EEEEeeEEccCC-CCCCCCceeEEEEEEccchhhhhhccCCCCcEE--EeCCCCcCCCCCeeeEEEecCCCCcccccccc
Confidence 999999998876 3688888776655 344445666 999999999999999999993 32 345
Q ss_pred CCCCC---------------CCcCCCCCCCCCCCCCCCCCCCchHhhHhh-----------hhc----------CCCCCc
Q 046620 128 LLRNT---------------ATPSDRNEQWAGGLLVYQSREDEALAVWSE-----------MWN----------FNFPVM 171 (219)
Q Consensus 128 l~~~~---------------VT~y~d~E~~asg~y~~qs~~~~~l~~Wv~-----------vwh----------ED~Pvm 171 (219)
++.++ ||+|+|+|+||||+|++|+.+++||..|++ +|| ||||||
T Consensus 620 l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~a~g~y~~q~~~~~gl~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvm 699 (727)
T 1spu_A 620 QFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIM 699 (727)
T ss_dssp SSCTTCHHHHHCGGGGCSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHHTTCCBCSSEEEEEEEEEEEEECCCGGGSSSE
T ss_pred ccCCcchhhhhhcccccceEEeccCCcccCCCCCCccCCCCCCCHHHHhhCCCccccCCcEEEEecccccCCChhhCCCC
Confidence 66665 999999999999999999988888888984 674 999999
Q ss_pred ccccceeeEeecCCCCCCCccCCCCCc
Q 046620 172 PTVPSSFDLEPVNFFHRNPTLRLPADC 198 (219)
Q Consensus 172 p~~~~gf~L~P~nFFd~nPs~d~p~~~ 198 (219)
|+++.||+|||+|||++||+||+|+++
T Consensus 700 p~~~~~f~L~P~nFFd~nPaldvp~~~ 726 (727)
T 1spu_A 700 PTEWVHTLLKPWNFFDETPTLGALKKD 726 (727)
T ss_dssp EEEEEEEEEEEESSSSSCTTSCCBC--
T ss_pred cccEEEEEEEeCCCCCCCCCcCCCCCC
Confidence 999999999999999999999999874
No 9
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=100.00 E-value=6.9e-58 Score=446.87 Aligned_cols=196 Identities=19% Similarity=0.333 Sum_probs=162.6
Q ss_pred CcccceeeeEEEccCCceEEE--Eeecc-----C-CCCCCCCCccccCcccccceeEEeeeeecccCCCCCeEEEEEeEE
Q 046620 1 MGNYDCIFDWELQTDGLILIK--NLYQV-----S-KPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGANNSFVEVHLEK 72 (219)
Q Consensus 1 VgNYDY~f~~~F~~DGtIe~e--~t~~~-----~-~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~~Nsv~~~~~~~ 72 (219)
||||||||+|+|||||+||++ .|+.+ . +++.+||++|+|+++|++|||+|||||||||||.+|||+++++++
T Consensus 435 VgNYdYif~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~ 514 (747)
T 1w7c_A 435 IGNADYNFLYKFFLDGTLEVSVRAAGYIQAGYWNPETSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKD 514 (747)
T ss_dssp CCC-CEEEEEEECTTSCEEEEEEECBCCCCEECCTTTCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEE
T ss_pred ccccceEEEEEEecCCeEEEEEEeeEEEeccccCCCCcCCCcceecCCcccCccceEEEEEeccccCCCCCEEEEEeeEE
Confidence 799999999999999999999 44444 3 334799999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCcc--eEEEEe-----------ecC-CCCCcEEEEecCCCCCCCCCCeeEEEecCCC-cccCCCCC-----
Q 046620 73 QETSPGESPRKS--YLKIEQ-----------CLN-LYDPSEFHVINPSRRSRLGNPSGHKAVPGGN-AATLLRNT----- 132 (219)
Q Consensus 73 ~~~~~~~~p~~~--~~~~e~-----------~~~-~~~~r~~~vvN~~~~N~~G~p~gYkl~p~~~-~~~l~~~~----- 132 (219)
++.+.++.+++. .++.++ +++ ..++|+| |+|++++|++|+|+||||+|+++ +++++.++
T Consensus 515 ~~~~np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~~r~~-ivN~~~~N~~G~p~gYkl~p~~~~~~~l~~~~s~~~~ 593 (747)
T 1w7c_A 515 VDVEYPWAPGTVYNTKQIAREVFENEDFNGINWPENGQGILL-IESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPE 593 (747)
T ss_dssp EEEECTTSTTCEEEEEEEEEEECCBCCTTCBCCCGGGCEEEE-EEEEEEECTTSCEEEEEEEECTTCCCCSCSSCTTCSS
T ss_pred cccCCCCCcccccceeEEEEEEccchhhhhhcCCCCCCceEE-EeCCCccCCCCCcceEEEecCCCCcccccCCCchhhh
Confidence 887633333222 455444 344 2458999 99999999999999999999988 87777766
Q ss_pred ----------CCcCCCCCCCCCCCCCCCCC----------------CCchHhhHhh--hhc----CCCCCc--cccccee
Q 046620 133 ----------ATPSDRNEQWAGGLLVYQSR----------------EDEALAVWSE--MWN----FNFPVM--PTVPSSF 178 (219)
Q Consensus 133 ----------VT~y~d~E~~asg~y~~qs~----------------~~~~l~~Wv~--vwh----ED~Pvm--p~~~~gf 178 (219)
||+|+|+|+||||+|++++. .++|||+|++ ++| |||||| |++++||
T Consensus 594 ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~~~~e~I~n~DiVlW~t~G~~HiPr~ED~PvM~tP~~~~gf 673 (747)
T 1w7c_A 594 TQNWARSNLFLTKHKDTELRSSTALNTNALYDPPVNFNAFLDDESLDGEDIVAWVNLGLHHLPNSNDLPNTIFSTAHASF 673 (747)
T ss_dssp SCGGGGSSEEEEECCTTCCCSCCTTCTTCSSSCSCCGGGGCSCCBCTTEEEEEEEEEEEEECCCGGGSSCBCSSSSEEEE
T ss_pred cchhccCcEEEecCCCCccCCCCCccccCCCCCCcchhhhhCCCccccCceEEEEecccccCCChhhcCCcCCCcceEEE
Confidence 99999999999999966443 2234455555 334 999999 7799999
Q ss_pred eEeecCCCCCCCccCCCCC
Q 046620 179 DLEPVNFFHRNPTLRLPAD 197 (219)
Q Consensus 179 ~L~P~nFFd~nPs~d~p~~ 197 (219)
+|||+|||++||+||+|++
T Consensus 674 ~LrP~nFF~~nP~ldvp~~ 692 (747)
T 1w7c_A 674 MLTPFNYFDSENSRDTTQQ 692 (747)
T ss_dssp EEEEESSSSSCTTTTCSSE
T ss_pred EEEeCCcCCCCCCccCCCc
Confidence 9999999999999999998
No 10
>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A
Probab=54.51 E-value=9.9 Score=31.04 Aligned_cols=59 Identities=15% Similarity=0.339 Sum_probs=43.5
Q ss_pred cceeeeEEEccCCceEEEEee------ccCCCCCCCCCccccCcccccceeEEe----eeeecccCCCCCeE
Q 046620 4 YDCIFDWELQTDGLILIKNLY------QVSKPGYMSGPLVCENVIGVVHDHFIT----LHLDMDIDGANNSF 65 (219)
Q Consensus 4 YDY~f~~~F~~DGtIe~e~t~------~~~~~~~~yG~~V~p~v~g~~HqH~f~----~RiD~dIdG~~Nsv 65 (219)
|+-++.|+|-..|.|.+...+ +++ --=|+-|-.++.|++|-|.+. ++..|.+.|..|.+
T Consensus 85 yE~tyS~yfgd~GhISvQGpy~t~~Dt~LA---ITGGTGif~gA~G~Vkl~~i~~P~k~~yTf~L~gi~~~l 153 (188)
T 2brj_A 85 FEATYSFYFGDYGHLSVQGPYLTYEDSFLA---ITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDL 153 (188)
T ss_dssp EEEEEEEECGGGEEEEEEEEEETTBCEEEE---EEEEEETTTTCEEEEEEEEEETTTEEEEEEEEECCSSCC
T ss_pred EEEEEEEEeCCCceEEEeccccccccceee---EecCcceEcceEEEEEEEeeccCceEEEEEEEecCcccC
Confidence 778889999999999999211 111 012778888999999999886 67777777877643
No 11
>1uww_A Endoglucanase; carbohydrate binding module, glycosidase, lectin, cellulose, binding, CBM, hydrolase; HET: MSE; 1.4A {Bacillus akibai} SCOP: b.18.1.23
Probab=21.79 E-value=76 Score=25.62 Aligned_cols=60 Identities=13% Similarity=0.110 Sum_probs=33.0
Q ss_pred ccccee-eeEEEcc----CCceEEE------EeeccCCCCCCCCCccccCcccccceeEEeeeeecccCCC
Q 046620 2 GNYDCI-FDWELQT----DGLILIK------NLYQVSKPGYMSGPLVCENVIGVVHDHFITLHLDMDIDGA 61 (219)
Q Consensus 2 gNYDY~-f~~~F~~----DGtIe~e------~t~~~~~~~~~yG~~V~p~v~g~~HqH~f~~RiD~dIdG~ 61 (219)
|+.+|+ ||+++.. -|+|.+. +.++++.....|-.-+..--.+..-+-+.+|++-+|++-.
T Consensus 84 g~n~YlaFDfYl~P~rAs~G~i~I~l~f~PP~lGyWaqa~~~f~I~l~~L~~a~t~DgLYh~~v~~dl~ki 154 (191)
T 1uww_A 84 GENDYVTFDFYLDPVRATEGAMNINLVFQPPTNGYWVQAPKTYTINFDELEEANQVNGLYHYEVKINVRDI 154 (191)
T ss_dssp TTCCEEEEEEEEEEEECCSCEEEEEEEECCGGGTTCEECSSCEEEEGGGGGGSCEETTEEEEEEEEECTTC
T ss_pred ccCceEEEEEEECccccCCceEEEEEEecCCCCccceeCcceeeccHHHhhhccCCCceEEEEEEEchhhh
Confidence 567775 6666653 4777777 3334432223444433332233345567778877777543
No 12
>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*
Probab=20.50 E-value=78 Score=25.85 Aligned_cols=46 Identities=15% Similarity=0.289 Sum_probs=31.3
Q ss_pred ccceeeeEEEccCCceEEEEe------eccCCCCCCCCCccccCcccccceeEEe
Q 046620 3 NYDCIFDWELQTDGLILIKNL------YQVSKPGYMSGPLVCENVIGVVHDHFIT 51 (219)
Q Consensus 3 NYDY~f~~~F~~DGtIe~e~t------~~~~~~~~~yG~~V~p~v~g~~HqH~f~ 51 (219)
-|+-++.|+|-.-|+|.+... ++++ --=||-|-.++.|+++-|-+.
T Consensus 92 ryEci~Tf~fGD~GhIsvqGpy~t~eDs~lA---ITGGTGiF~Ga~GqVkl~qiv 143 (195)
T 4h6b_A 92 RYEALYSFYFGDYGHISVQGPYITYEDSYLA---ITGGSGIFAGCYGQAKLHQII 143 (195)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEETTBCEEEE---EEEESGGGTTCEEEEEEEEEE
T ss_pred eEEEEEEEEecCCceEEEecceeccCceeEE---EecCcceEcccEEEEEEeEee
Confidence 378888888877799999911 1221 011667778888988877665
Done!