Query 046623
Match_columns 218
No_of_seqs 142 out of 1772
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 04:10:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lpm_A Putative methyltransfer 99.8 1.7E-19 5.6E-24 145.0 17.9 179 8-206 17-218 (259)
2 3bzb_A Uncharacterized protein 99.8 1E-18 3.5E-23 142.1 15.2 159 27-187 52-234 (281)
3 3dmg_A Probable ribosomal RNA 99.8 8.8E-17 3E-21 135.8 19.5 155 5-176 190-353 (381)
4 2ozv_A Hypothetical protein AT 99.7 2.2E-17 7.4E-22 132.8 13.7 162 37-206 23-211 (260)
5 3evz_A Methyltransferase; NYSG 99.7 1E-16 3.4E-21 126.1 15.1 149 52-210 54-223 (230)
6 3bus_A REBM, methyltransferase 99.7 2.1E-16 7.1E-21 127.3 17.2 143 41-187 48-213 (273)
7 3f4k_A Putative methyltransfer 99.7 1.8E-16 6.2E-21 126.4 16.5 131 52-187 45-193 (257)
8 3kkz_A Uncharacterized protein 99.7 1.5E-16 5E-21 128.0 15.7 131 52-187 45-193 (267)
9 1xxl_A YCGJ protein; structura 99.7 2.1E-16 7.1E-21 125.2 16.3 144 35-187 6-171 (239)
10 3dlc_A Putative S-adenosyl-L-m 99.7 3.8E-17 1.3E-21 126.9 11.1 101 55-159 45-146 (219)
11 3vc1_A Geranyl diphosphate 2-C 99.7 4.3E-16 1.5E-20 128.2 17.8 131 51-187 115-266 (312)
12 1nkv_A Hypothetical protein YJ 99.7 2.1E-16 7.3E-21 126.0 14.8 134 49-187 32-184 (256)
13 3mti_A RRNA methylase; SAM-dep 99.7 1.2E-16 4.2E-21 121.4 12.7 145 51-201 20-180 (185)
14 1vl5_A Unknown conserved prote 99.7 3.5E-16 1.2E-20 125.2 15.4 130 52-187 36-187 (260)
15 4htf_A S-adenosylmethionine-de 99.7 2.7E-16 9.4E-21 127.5 14.5 131 53-187 68-229 (285)
16 3dh0_A SAM dependent methyltra 99.7 4.3E-16 1.5E-20 121.4 15.0 131 52-187 36-178 (219)
17 3jwg_A HEN1, methyltransferase 99.7 8.2E-16 2.8E-20 119.9 16.7 150 52-206 28-211 (219)
18 3lcc_A Putative methyl chlorid 99.7 1.8E-16 6.1E-21 125.1 12.9 141 40-187 54-204 (235)
19 3sm3_A SAM-dependent methyltra 99.7 4E-16 1.4E-20 122.4 14.5 130 53-187 30-204 (235)
20 3e05_A Precorrin-6Y C5,15-meth 99.7 3.3E-15 1.1E-19 115.4 19.4 127 50-187 37-165 (204)
21 3ujc_A Phosphoethanolamine N-m 99.7 4E-16 1.4E-20 124.8 14.2 144 37-187 38-203 (266)
22 2o57_A Putative sarcosine dime 99.7 9.3E-16 3.2E-20 125.0 16.6 132 51-187 80-231 (297)
23 3g5l_A Putative S-adenosylmeth 99.7 4.6E-16 1.6E-20 124.0 14.3 104 49-160 40-144 (253)
24 1pjz_A Thiopurine S-methyltran 99.7 9.4E-17 3.2E-21 124.4 10.0 144 38-187 7-173 (203)
25 3p9n_A Possible methyltransfer 99.7 3.2E-16 1.1E-20 119.7 12.7 101 52-155 43-147 (189)
26 4dcm_A Ribosomal RNA large sub 99.7 9E-16 3.1E-20 129.4 16.4 155 4-176 184-347 (375)
27 3njr_A Precorrin-6Y methylase; 99.7 2.2E-15 7.6E-20 116.7 17.3 125 51-188 53-178 (204)
28 3g89_A Ribosomal RNA small sub 99.7 2.2E-16 7.5E-21 126.1 11.2 148 52-206 79-228 (249)
29 3eey_A Putative rRNA methylase 99.7 2.1E-16 7.1E-21 121.4 10.5 150 52-204 21-187 (197)
30 3hem_A Cyclopropane-fatty-acyl 99.7 2.7E-15 9.2E-20 122.8 17.8 109 46-162 65-184 (302)
31 3jwh_A HEN1; methyltransferase 99.7 1.5E-15 5.3E-20 118.3 15.6 100 52-155 28-135 (217)
32 1xtp_A LMAJ004091AAA; SGPP, st 99.7 6.7E-16 2.3E-20 122.8 13.7 136 45-187 85-235 (254)
33 1dus_A MJ0882; hypothetical pr 99.7 2.1E-15 7.1E-20 114.7 15.7 137 7-160 17-156 (194)
34 1kpg_A CFA synthase;, cyclopro 99.7 3.1E-15 1.1E-19 121.4 17.6 105 49-161 60-168 (287)
35 3h2b_A SAM-dependent methyltra 99.7 8.5E-16 2.9E-20 118.4 13.5 137 41-192 33-184 (203)
36 2ex4_A Adrenal gland protein A 99.7 9.2E-16 3.1E-20 121.5 13.3 130 53-187 79-222 (241)
37 2p7i_A Hypothetical protein; p 99.7 4.4E-16 1.5E-20 123.1 11.3 125 52-187 41-196 (250)
38 2frn_A Hypothetical protein PH 99.7 1.6E-15 5.4E-20 123.0 14.7 125 53-187 125-254 (278)
39 3mgg_A Methyltransferase; NYSG 99.7 1.9E-15 6.6E-20 121.8 14.8 118 38-160 21-141 (276)
40 3grz_A L11 mtase, ribosomal pr 99.7 9.1E-16 3.1E-20 118.5 11.9 153 36-207 44-197 (205)
41 2ift_A Putative methylase HI07 99.7 9.2E-17 3.1E-21 124.2 6.2 104 53-159 53-161 (201)
42 1xdz_A Methyltransferase GIDB; 99.7 5.3E-16 1.8E-20 123.0 10.7 129 53-188 70-200 (240)
43 3k6r_A Putative transferase PH 99.7 1.8E-15 6.2E-20 122.3 13.8 127 52-187 124-254 (278)
44 2nxc_A L11 mtase, ribosomal pr 99.6 1.6E-15 5.4E-20 121.5 13.0 138 35-187 103-241 (254)
45 3hnr_A Probable methyltransfer 99.6 8.2E-15 2.8E-19 114.1 16.6 128 52-190 44-201 (220)
46 4gek_A TRNA (CMO5U34)-methyltr 99.6 2.9E-15 9.8E-20 120.5 13.5 102 52-159 69-176 (261)
47 1yzh_A TRNA (guanine-N(7)-)-me 99.6 9.2E-15 3.2E-19 113.8 15.9 130 53-188 41-180 (214)
48 2yxd_A Probable cobalt-precorr 99.6 1.1E-14 3.7E-19 109.8 15.8 132 40-187 21-154 (183)
49 3g5t_A Trans-aconitate 3-methy 99.6 2.7E-15 9.3E-20 122.6 13.3 119 42-161 25-149 (299)
50 4fsd_A Arsenic methyltransfera 99.6 4.3E-15 1.5E-19 125.7 14.7 136 52-187 82-248 (383)
51 3hm2_A Precorrin-6Y C5,15-meth 99.6 8.9E-15 3.1E-19 110.1 14.9 127 52-189 24-152 (178)
52 4hc4_A Protein arginine N-meth 99.6 1.6E-15 5.4E-20 127.5 11.2 100 52-156 82-184 (376)
53 1y8c_A S-adenosylmethionine-de 99.6 7.1E-15 2.4E-19 116.0 14.4 100 52-159 36-140 (246)
54 4hg2_A Methyltransferase type 99.6 9.8E-16 3.4E-20 122.9 9.4 129 20-164 9-138 (257)
55 2fk8_A Methoxy mycolic acid sy 99.6 8.9E-15 3E-19 120.4 15.4 105 49-161 86-194 (318)
56 3e23_A Uncharacterized protein 99.6 4.7E-15 1.6E-19 114.9 12.8 133 40-187 32-179 (211)
57 3l8d_A Methyltransferase; stru 99.6 5.7E-15 2E-19 116.6 13.4 126 53-187 53-197 (242)
58 3e8s_A Putative SAM dependent 99.6 4.6E-15 1.6E-19 115.6 12.7 129 52-189 51-208 (227)
59 3g2m_A PCZA361.24; SAM-depende 99.6 8.3E-15 2.8E-19 119.7 14.7 102 53-160 82-189 (299)
60 1ve3_A Hypothetical protein PH 99.6 9.4E-15 3.2E-19 114.2 14.3 113 40-160 26-141 (227)
61 3q87_B N6 adenine specific DNA 99.6 2E-14 7E-19 108.1 15.5 147 37-207 8-164 (170)
62 1ri5_A MRNA capping enzyme; me 99.6 4.7E-15 1.6E-19 120.5 12.8 107 52-161 63-174 (298)
63 3cgg_A SAM-dependent methyltra 99.6 1.2E-14 4.1E-19 110.6 14.3 124 52-187 45-172 (195)
64 3dtn_A Putative methyltransfer 99.6 6.8E-15 2.3E-19 115.7 13.2 101 52-160 43-147 (234)
65 3bkw_A MLL3908 protein, S-aden 99.6 5.6E-15 1.9E-19 116.6 12.4 101 52-160 42-143 (243)
66 2fhp_A Methylase, putative; al 99.6 1.2E-15 4E-20 115.8 8.1 121 37-158 26-151 (187)
67 2b3t_A Protein methyltransfera 99.6 1.3E-14 4.3E-19 117.4 14.5 140 37-187 93-260 (276)
68 3tma_A Methyltransferase; thum 99.6 3.8E-14 1.3E-18 118.6 17.7 138 38-187 187-336 (354)
69 3gu3_A Methyltransferase; alph 99.6 1.2E-14 4E-19 118.0 14.1 102 52-160 21-125 (284)
70 3dli_A Methyltransferase; PSI- 99.6 1E-14 3.5E-19 115.4 13.4 124 52-187 40-181 (240)
71 3ege_A Putative methyltransfer 99.6 6.6E-15 2.3E-19 118.0 12.2 132 42-187 22-175 (261)
72 3ocj_A Putative exported prote 99.6 5E-15 1.7E-19 121.4 11.7 103 52-159 117-225 (305)
73 2igt_A SAM dependent methyltra 99.6 1.3E-14 4.6E-19 120.4 14.3 133 53-186 153-300 (332)
74 2xvm_A Tellurite resistance pr 99.6 2.1E-14 7.2E-19 109.8 13.6 127 52-187 31-170 (199)
75 3kr9_A SAM-dependent methyltra 99.6 1.3E-14 4.5E-19 113.7 12.0 126 52-188 14-141 (225)
76 2kw5_A SLR1183 protein; struct 99.6 2.6E-14 8.8E-19 109.9 13.5 135 41-187 20-168 (202)
77 3lec_A NADB-rossmann superfami 99.6 1.6E-14 5.6E-19 113.4 12.5 141 52-205 20-162 (230)
78 2yqz_A Hypothetical protein TT 99.6 1.2E-14 4.1E-19 116.0 12.0 102 52-160 38-140 (263)
79 4dzr_A Protein-(glutamine-N5) 99.6 7.7E-16 2.6E-20 119.1 4.7 146 37-187 12-189 (215)
80 3ofk_A Nodulation protein S; N 99.6 2.7E-14 9.4E-19 110.9 13.4 114 36-158 33-151 (216)
81 3ou2_A SAM-dependent methyltra 99.6 2.6E-14 8.7E-19 110.9 13.2 98 52-160 45-145 (218)
82 1l3i_A Precorrin-6Y methyltran 99.6 1.3E-14 4.3E-19 110.2 11.1 135 42-187 21-157 (192)
83 3q7e_A Protein arginine N-meth 99.6 1.1E-14 3.8E-19 121.7 11.7 102 52-157 65-169 (349)
84 1ixk_A Methyltransferase; open 99.6 4E-14 1.4E-18 116.7 14.8 132 52-188 117-273 (315)
85 3g07_A 7SK snRNA methylphospha 99.6 9.7E-15 3.3E-19 119.1 10.9 106 52-157 45-216 (292)
86 2fpo_A Methylase YHHF; structu 99.6 4.1E-15 1.4E-19 115.0 8.2 101 53-158 54-157 (202)
87 3u81_A Catechol O-methyltransf 99.6 2.2E-14 7.5E-19 112.2 12.4 153 52-207 57-215 (221)
88 2esr_A Methyltransferase; stru 99.6 2.5E-15 8.6E-20 113.4 6.7 103 52-158 30-135 (177)
89 3bkx_A SAM-dependent methyltra 99.6 1.1E-13 3.7E-18 111.4 16.7 108 51-160 41-158 (275)
90 3fpf_A Mtnas, putative unchara 99.6 2.1E-14 7.2E-19 116.6 12.4 127 52-189 121-249 (298)
91 2fca_A TRNA (guanine-N(7)-)-me 99.6 4.9E-14 1.7E-18 109.8 14.1 129 53-187 38-176 (213)
92 2a14_A Indolethylamine N-methy 99.6 2.6E-15 8.9E-20 120.7 6.8 139 50-188 52-236 (263)
93 4df3_A Fibrillarin-like rRNA/T 99.6 9.7E-14 3.3E-18 109.3 15.6 162 19-187 37-214 (233)
94 3i9f_A Putative type 11 methyl 99.6 1.1E-14 3.7E-19 109.1 9.5 121 52-188 16-146 (170)
95 2fyt_A Protein arginine N-meth 99.6 2.2E-14 7.5E-19 119.5 12.4 104 51-158 62-168 (340)
96 3gnl_A Uncharacterized protein 99.6 2E-14 6.9E-19 113.8 11.5 126 52-188 20-147 (244)
97 3d2l_A SAM-dependent methyltra 99.6 6.4E-14 2.2E-18 110.5 14.5 98 53-159 33-135 (243)
98 1jsx_A Glucose-inhibited divis 99.6 1.7E-14 5.7E-19 111.4 10.8 120 53-188 65-186 (207)
99 2i62_A Nicotinamide N-methyltr 99.6 9.6E-15 3.3E-19 116.7 9.8 139 50-188 53-237 (265)
100 3ccf_A Cyclopropane-fatty-acyl 99.6 2.8E-14 9.6E-19 115.3 12.5 98 52-161 56-154 (279)
101 3pfg_A N-methyltransferase; N, 99.6 5.9E-14 2E-18 112.3 14.1 95 53-159 50-149 (263)
102 2p8j_A S-adenosylmethionine-de 99.6 1.1E-14 3.7E-19 112.5 9.3 103 52-161 22-128 (209)
103 2gb4_A Thiopurine S-methyltran 99.6 2.4E-14 8.3E-19 114.5 11.5 142 41-187 55-224 (252)
104 1x19_A CRTF-related protein; m 99.6 2.1E-13 7.2E-18 114.2 17.5 132 49-187 186-345 (359)
105 3m70_A Tellurite resistance pr 99.6 2.4E-14 8.2E-19 116.1 11.4 126 52-187 119-257 (286)
106 1wzn_A SAM-dependent methyltra 99.6 1.4E-13 4.6E-18 109.4 15.4 109 42-158 30-142 (252)
107 3mb5_A SAM-dependent methyltra 99.6 5E-14 1.7E-18 112.3 12.6 124 51-187 91-219 (255)
108 2gs9_A Hypothetical protein TT 99.6 5.1E-14 1.8E-18 109.0 12.3 95 53-160 36-131 (211)
109 3r0q_C Probable protein argini 99.5 4E-14 1.4E-18 119.5 12.6 112 41-157 50-165 (376)
110 3c0k_A UPF0064 protein YCCW; P 99.5 3.1E-14 1.1E-18 120.9 11.9 136 52-187 219-367 (396)
111 3gwz_A MMCR; methyltransferase 99.5 3.4E-13 1.1E-17 113.5 17.9 132 49-187 198-353 (369)
112 1fbn_A MJ fibrillarin homologu 99.5 2.6E-13 9E-18 106.7 15.6 129 52-187 73-210 (230)
113 3i53_A O-methyltransferase; CO 99.5 2.4E-13 8E-18 112.7 16.0 128 53-187 169-318 (332)
114 2qm3_A Predicted methyltransfe 99.5 4.4E-13 1.5E-17 112.9 17.8 132 51-187 170-306 (373)
115 1nv8_A HEMK protein; class I a 99.5 9.7E-14 3.3E-18 112.8 13.3 98 53-156 123-244 (284)
116 1g6q_1 HnRNP arginine N-methyl 99.5 5.1E-14 1.7E-18 116.7 11.8 102 52-157 37-141 (328)
117 2pjd_A Ribosomal RNA small sub 99.5 4.1E-14 1.4E-18 117.9 11.2 114 53-176 196-316 (343)
118 3fzg_A 16S rRNA methylase; met 99.5 7.5E-15 2.6E-19 111.4 6.1 129 53-190 49-188 (200)
119 3lbf_A Protein-L-isoaspartate 99.5 8.1E-14 2.8E-18 107.8 12.0 110 40-161 64-174 (210)
120 3tfw_A Putative O-methyltransf 99.5 3.1E-13 1.1E-17 107.7 15.6 155 52-214 62-235 (248)
121 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.8E-13 6.1E-18 109.0 14.1 124 51-187 94-221 (258)
122 3duw_A OMT, O-methyltransferas 99.5 1.8E-13 6E-18 107.0 13.7 134 52-190 57-208 (223)
123 1wy7_A Hypothetical protein PH 99.5 5.5E-13 1.9E-17 102.9 16.4 123 51-187 47-172 (207)
124 2p35_A Trans-aconitate 2-methy 99.5 1.5E-13 5E-18 109.5 13.5 107 44-161 24-132 (259)
125 3ajd_A Putative methyltransfer 99.5 5.4E-14 1.8E-18 113.7 11.0 136 52-188 82-239 (274)
126 2g72_A Phenylethanolamine N-me 99.5 3.9E-14 1.3E-18 115.1 10.2 136 52-187 70-253 (289)
127 3a27_A TYW2, uncharacterized p 99.5 1.6E-13 5.3E-18 110.9 13.6 124 52-185 118-246 (272)
128 1o54_A SAM-dependent O-methylt 99.5 1.7E-13 5.7E-18 110.8 13.8 123 52-187 111-236 (277)
129 3dxy_A TRNA (guanine-N(7)-)-me 99.5 4E-14 1.4E-18 110.8 9.7 129 53-185 34-172 (218)
130 2b78_A Hypothetical protein SM 99.5 2.2E-14 7.6E-19 121.4 8.7 132 52-185 211-357 (385)
131 3orh_A Guanidinoacetate N-meth 99.5 9.1E-15 3.1E-19 115.8 5.7 104 52-159 59-168 (236)
132 1ws6_A Methyltransferase; stru 99.5 1.9E-14 6.4E-19 107.5 7.1 100 53-157 41-143 (171)
133 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.8E-13 1.3E-17 105.9 14.9 134 52-192 76-220 (233)
134 3thr_A Glycine N-methyltransfe 99.5 5E-14 1.7E-18 114.4 9.9 106 52-159 56-173 (293)
135 2pxx_A Uncharacterized protein 99.5 7.2E-14 2.5E-18 108.0 10.3 111 41-159 31-157 (215)
136 3v97_A Ribosomal RNA large sub 99.5 4.5E-14 1.5E-18 127.7 10.3 147 52-205 538-701 (703)
137 2r3s_A Uncharacterized protein 99.5 2.7E-13 9.2E-18 112.2 14.1 131 52-187 164-320 (335)
138 3ggd_A SAM-dependent methyltra 99.5 8.1E-14 2.8E-18 110.3 10.4 104 52-160 55-162 (245)
139 1zx0_A Guanidinoacetate N-meth 99.5 8.5E-15 2.9E-19 115.7 4.7 103 52-158 59-167 (236)
140 3m33_A Uncharacterized protein 99.5 7.3E-14 2.5E-18 109.6 9.9 116 52-187 47-164 (226)
141 3tm4_A TRNA (guanine N2-)-meth 99.5 5.7E-13 1.9E-17 112.3 16.0 124 52-187 216-349 (373)
142 2yx1_A Hypothetical protein MJ 99.5 5.7E-14 1.9E-18 116.8 9.7 118 53-187 195-314 (336)
143 3mcz_A O-methyltransferase; ad 99.5 6.9E-13 2.4E-17 110.6 16.2 130 54-187 180-336 (352)
144 3hp7_A Hemolysin, putative; st 99.5 3.8E-13 1.3E-17 109.2 14.1 149 34-192 65-234 (291)
145 2h00_A Methyltransferase 10 do 99.5 9.5E-13 3.2E-17 104.9 16.2 85 53-137 65-153 (254)
146 1yb2_A Hypothetical protein TA 99.5 1.5E-13 5E-18 111.1 11.5 122 52-187 109-234 (275)
147 3cc8_A Putative methyltransfer 99.5 1.4E-13 4.8E-18 107.4 11.0 125 52-187 31-182 (230)
148 1ej0_A FTSJ; methyltransferase 99.5 6.6E-13 2.3E-17 99.1 14.2 135 38-187 6-158 (180)
149 3iv6_A Putative Zn-dependent a 99.5 2.6E-13 8.8E-18 108.8 12.6 101 49-158 41-145 (261)
150 1tw3_A COMT, carminomycin 4-O- 99.5 9.6E-13 3.3E-17 110.1 16.6 129 52-187 182-336 (360)
151 1qzz_A RDMB, aclacinomycin-10- 99.5 1.6E-12 5.5E-17 109.2 18.1 129 52-187 181-336 (374)
152 3gdh_A Trimethylguanosine synt 99.5 4.7E-15 1.6E-19 117.3 2.4 98 53-156 78-176 (241)
153 2yvl_A TRMI protein, hypotheti 99.5 1.1E-12 3.6E-17 103.9 16.0 122 52-187 90-212 (248)
154 2ip2_A Probable phenazine-spec 99.5 7.6E-13 2.6E-17 109.6 15.8 126 55-187 169-319 (334)
155 3r3h_A O-methyltransferase, SA 99.5 1.4E-13 4.9E-18 109.3 10.4 145 52-207 59-222 (242)
156 2vdw_A Vaccinia virus capping 99.5 2.5E-13 8.6E-18 111.3 12.1 105 53-157 48-165 (302)
157 2y1w_A Histone-arginine methyl 99.5 1.7E-13 5.8E-18 114.5 11.2 102 52-158 49-152 (348)
158 2as0_A Hypothetical protein PH 99.5 4.9E-14 1.7E-18 119.7 7.8 135 53-187 217-363 (396)
159 3dp7_A SAM-dependent methyltra 99.5 3.6E-13 1.2E-17 113.0 12.9 131 53-187 179-339 (363)
160 1vlm_A SAM-dependent methyltra 99.5 2E-13 6.7E-18 106.5 10.4 118 53-187 47-185 (219)
161 1uwv_A 23S rRNA (uracil-5-)-me 99.5 3.6E-12 1.2E-16 109.4 19.1 158 39-206 271-431 (433)
162 1o9g_A RRNA methyltransferase; 99.5 1.1E-13 3.8E-18 110.2 9.0 108 52-159 50-212 (250)
163 3id6_C Fibrillarin-like rRNA/T 99.5 1.3E-12 4.3E-17 103.0 14.7 148 33-187 51-213 (232)
164 3opn_A Putative hemolysin; str 99.5 2.3E-13 7.9E-18 107.4 10.4 144 37-190 20-184 (232)
165 1wxx_A TT1595, hypothetical pr 99.5 3.8E-13 1.3E-17 113.7 12.3 133 53-187 209-353 (382)
166 3ntv_A MW1564 protein; rossman 99.5 6.5E-13 2.2E-17 104.7 12.6 99 52-155 70-170 (232)
167 3bxo_A N,N-dimethyltransferase 99.5 7E-13 2.4E-17 104.2 12.8 106 41-159 29-139 (239)
168 3dr5_A Putative O-methyltransf 99.5 2.1E-13 7.3E-18 106.9 9.5 98 53-155 56-157 (221)
169 3m4x_A NOL1/NOP2/SUN family pr 99.5 3.3E-13 1.1E-17 116.1 11.5 143 38-187 93-260 (456)
170 2aot_A HMT, histamine N-methyl 99.5 3.2E-13 1.1E-17 109.9 10.9 135 52-187 51-218 (292)
171 1nt2_A Fibrillarin-like PRE-rR 99.5 1.6E-12 5.5E-17 101.1 14.3 128 52-187 56-192 (210)
172 3tr6_A O-methyltransferase; ce 99.5 3.8E-13 1.3E-17 105.1 10.8 100 52-155 63-168 (225)
173 3m6w_A RRNA methylase; rRNA me 99.5 3.9E-13 1.3E-17 115.8 11.7 142 38-187 89-256 (464)
174 4dmg_A Putative uncharacterize 99.5 1.5E-13 5.2E-18 116.4 8.9 104 53-162 214-327 (393)
175 1sqg_A SUN protein, FMU protei 99.5 1.3E-12 4.4E-17 112.0 14.7 141 38-185 234-399 (429)
176 1i9g_A Hypothetical protein RV 99.5 8.4E-13 2.9E-17 106.5 12.8 124 51-186 97-226 (280)
177 2yxe_A Protein-L-isoaspartate 99.5 6.1E-13 2.1E-17 103.2 11.5 114 36-160 60-176 (215)
178 2jjq_A Uncharacterized RNA met 99.5 1.8E-11 6.3E-16 104.6 21.4 146 38-204 277-424 (425)
179 3uwp_A Histone-lysine N-methyl 99.4 3.1E-13 1E-17 114.0 10.1 104 51-157 171-284 (438)
180 1vbf_A 231AA long hypothetical 99.4 7.3E-13 2.5E-17 103.9 11.5 111 36-160 53-164 (231)
181 1sui_A Caffeoyl-COA O-methyltr 99.4 7.4E-13 2.5E-17 105.5 11.3 103 52-157 78-186 (247)
182 1u2z_A Histone-lysine N-methyl 99.4 9.1E-13 3.1E-17 112.5 12.2 114 42-156 231-354 (433)
183 3b3j_A Histone-arginine methyl 99.4 2.3E-13 7.8E-18 118.2 8.5 102 52-158 157-260 (480)
184 3bt7_A TRNA (uracil-5-)-methyl 99.4 8.6E-13 2.9E-17 111.0 11.4 153 40-205 200-367 (369)
185 3bgv_A MRNA CAP guanine-N7 met 99.4 3.4E-13 1.2E-17 110.8 8.6 106 53-158 34-152 (313)
186 1dl5_A Protein-L-isoaspartate 99.4 7.5E-13 2.6E-17 109.1 10.7 101 49-160 71-174 (317)
187 4e2x_A TCAB9; kijanose, tetron 99.4 2E-13 6.7E-18 116.5 6.9 129 52-189 106-252 (416)
188 2avn_A Ubiquinone/menaquinone 99.4 7.8E-13 2.7E-17 105.8 10.0 97 53-161 54-152 (260)
189 3bwc_A Spermidine synthase; SA 99.4 5.8E-13 2E-17 109.3 9.3 149 52-203 94-256 (304)
190 2yxl_A PH0851 protein, 450AA l 99.4 1.6E-12 5.6E-17 112.0 12.3 133 52-187 258-416 (450)
191 3dou_A Ribosomal RNA large sub 99.4 4.8E-12 1.6E-16 96.9 13.6 149 37-202 8-178 (191)
192 2gpy_A O-methyltransferase; st 99.4 8.4E-13 2.9E-17 103.9 9.5 101 52-156 53-155 (233)
193 4a6d_A Hydroxyindole O-methylt 99.4 6.2E-12 2.1E-16 105.2 15.1 146 52-209 178-348 (353)
194 1g8a_A Fibrillarin-like PRE-rR 99.4 8E-12 2.7E-16 97.8 14.9 128 52-187 72-209 (227)
195 2avd_A Catechol-O-methyltransf 99.4 4.1E-12 1.4E-16 99.4 13.0 132 52-189 68-219 (229)
196 3adn_A Spermidine synthase; am 99.4 2.4E-12 8.4E-17 105.0 12.0 145 53-202 83-242 (294)
197 1ne2_A Hypothetical protein TA 99.4 3.9E-12 1.4E-16 97.6 12.4 116 51-187 49-167 (200)
198 2frx_A Hypothetical protein YE 99.4 3E-12 1E-16 111.0 12.9 125 53-181 117-266 (479)
199 3htx_A HEN1; HEN1, small RNA m 99.4 1.9E-11 6.5E-16 110.5 18.2 98 52-154 720-828 (950)
200 2zfu_A Nucleomethylin, cerebra 99.4 2E-12 6.9E-17 100.3 10.6 113 52-189 66-178 (215)
201 3ckk_A TRNA (guanine-N(7)-)-me 99.4 2.4E-12 8.4E-17 101.7 11.0 127 53-184 46-189 (235)
202 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4.7E-12 1.6E-16 100.6 12.7 102 53-156 49-168 (246)
203 3lst_A CALO1 methyltransferase 99.4 2E-12 6.8E-17 107.9 11.0 128 51-187 182-333 (348)
204 2plw_A Ribosomal RNA methyltra 99.4 1.4E-11 4.6E-16 94.5 14.9 134 38-187 6-176 (201)
205 3c3p_A Methyltransferase; NP_9 99.4 1E-12 3.6E-17 101.7 8.5 96 53-155 56-154 (210)
206 3mq2_A 16S rRNA methyltransfer 99.4 3.1E-12 1.1E-16 99.4 11.1 131 52-188 26-182 (218)
207 2hnk_A SAM-dependent O-methylt 99.4 3.5E-12 1.2E-16 100.8 11.2 134 52-190 59-222 (239)
208 2f8l_A Hypothetical protein LM 99.4 2.1E-12 7.2E-17 107.6 10.3 146 53-205 130-303 (344)
209 3c3y_A Pfomt, O-methyltransfer 99.4 5.6E-12 1.9E-16 99.7 12.0 101 52-155 69-175 (237)
210 1jg1_A PIMT;, protein-L-isoasp 99.4 4.3E-12 1.5E-16 100.0 11.0 99 51-160 89-188 (235)
211 2b25_A Hypothetical protein; s 99.4 7.2E-12 2.4E-16 104.0 12.6 116 52-176 104-232 (336)
212 2ih2_A Modification methylase 99.4 9.8E-12 3.4E-16 105.9 13.7 151 40-207 25-211 (421)
213 3cbg_A O-methyltransferase; cy 99.4 2.9E-12 1E-16 100.9 9.5 100 53-155 72-176 (232)
214 2pbf_A Protein-L-isoaspartate 99.4 4.2E-12 1.4E-16 99.3 10.2 105 52-162 79-194 (227)
215 3p2e_A 16S rRNA methylase; met 99.3 1.3E-12 4.4E-17 102.7 6.5 132 53-188 24-183 (225)
216 2qe6_A Uncharacterized protein 99.3 1.2E-11 3.9E-16 100.0 12.1 107 53-162 77-197 (274)
217 1i1n_A Protein-L-isoaspartate 99.3 6.3E-12 2.2E-16 98.3 10.2 99 52-160 76-181 (226)
218 3k0b_A Predicted N6-adenine-sp 99.3 3.7E-11 1.3E-15 101.8 15.5 118 40-162 187-351 (393)
219 3ldg_A Putative uncharacterize 99.3 5.7E-11 1.9E-15 100.3 16.2 118 40-162 180-344 (384)
220 3ldu_A Putative methylase; str 99.3 5.3E-11 1.8E-15 100.6 15.2 117 40-161 181-344 (385)
221 3reo_A (ISO)eugenol O-methyltr 99.3 5.2E-11 1.8E-15 100.1 14.9 121 52-187 202-352 (368)
222 2wa2_A Non-structural protein 99.3 4.2E-12 1.4E-16 102.7 7.6 156 35-201 64-232 (276)
223 2okc_A Type I restriction enzy 99.3 2.6E-11 9E-16 104.4 12.9 127 52-183 170-332 (445)
224 2pt6_A Spermidine synthase; tr 99.3 3.5E-12 1.2E-16 105.3 6.6 105 53-160 116-229 (321)
225 1inl_A Spermidine synthase; be 99.3 6.2E-12 2.1E-16 102.7 7.9 105 53-160 90-204 (296)
226 2bm8_A Cephalosporin hydroxyla 99.3 1.7E-11 5.8E-16 96.9 10.1 94 53-155 81-181 (236)
227 3axs_A Probable N(2),N(2)-dime 99.3 1.9E-12 6.5E-17 109.4 4.8 103 53-162 52-158 (392)
228 2nyu_A Putative ribosomal RNA 99.3 7.7E-11 2.6E-15 89.8 13.2 133 39-187 7-167 (196)
229 3lcv_B Sisomicin-gentamicin re 99.3 9.1E-12 3.1E-16 98.8 7.9 129 53-191 132-273 (281)
230 4azs_A Methyltransferase WBDD; 99.3 4.2E-12 1.4E-16 112.5 6.6 104 53-160 66-172 (569)
231 2dul_A N(2),N(2)-dimethylguano 99.3 1.6E-11 5.5E-16 103.5 9.2 101 53-162 47-164 (378)
232 1r18_A Protein-L-isoaspartate( 99.3 1.3E-11 4.4E-16 96.7 8.0 99 52-160 83-193 (227)
233 1zq9_A Probable dimethyladenos 99.2 4.6E-11 1.6E-15 97.0 11.2 88 42-136 17-105 (285)
234 1iy9_A Spermidine synthase; ro 99.2 2.2E-11 7.5E-16 98.5 9.2 104 53-159 75-187 (275)
235 1p91_A Ribosomal RNA large sub 99.2 2.8E-11 9.6E-16 97.0 9.7 93 52-161 84-178 (269)
236 1fp2_A Isoflavone O-methyltran 99.2 4.9E-11 1.7E-15 99.5 11.5 121 52-187 187-338 (352)
237 3p9c_A Caffeic acid O-methyltr 99.2 5.5E-11 1.9E-15 99.8 11.7 122 52-187 200-350 (364)
238 1fp1_D Isoliquiritigenin 2'-O- 99.2 5.9E-11 2E-15 99.8 11.6 121 52-187 208-357 (372)
239 3frh_A 16S rRNA methylase; met 99.2 1.5E-10 5.2E-15 90.9 13.0 100 52-163 104-206 (253)
240 1mjf_A Spermidine synthase; sp 99.2 1.4E-11 4.7E-16 100.0 7.2 103 53-160 75-192 (281)
241 1uir_A Polyamine aminopropyltr 99.2 2.4E-11 8.4E-16 100.0 8.7 107 53-162 77-196 (314)
242 1af7_A Chemotaxis receptor met 99.2 1.6E-11 5.4E-16 99.1 7.3 100 53-155 105-246 (274)
243 2oxt_A Nucleoside-2'-O-methylt 99.2 1.9E-11 6.5E-16 98.3 7.4 117 35-160 56-184 (265)
244 2h1r_A Dimethyladenosine trans 99.2 6.4E-11 2.2E-15 96.8 10.4 77 52-136 41-118 (299)
245 1xj5_A Spermidine synthase 1; 99.2 5.5E-11 1.9E-15 98.6 9.2 102 52-155 119-229 (334)
246 2o07_A Spermidine synthase; st 99.2 2.8E-11 9.5E-16 99.2 7.2 105 52-159 94-207 (304)
247 2b9e_A NOL1/NOP2/SUN domain fa 99.2 2.3E-10 8E-15 93.9 12.6 142 38-186 90-261 (309)
248 3gjy_A Spermidine synthase; AP 99.2 6.5E-11 2.2E-15 97.1 8.9 106 54-162 90-201 (317)
249 2b2c_A Spermidine synthase; be 99.2 2.5E-11 8.6E-16 99.9 6.3 100 53-155 108-216 (314)
250 3gru_A Dimethyladenosine trans 99.1 4.4E-10 1.5E-14 91.5 12.3 88 41-136 38-126 (295)
251 2i7c_A Spermidine synthase; tr 99.1 7.7E-11 2.6E-15 95.6 7.2 103 52-157 77-188 (283)
252 1zg3_A Isoflavanone 4'-O-methy 99.1 3E-10 1E-14 94.9 11.0 121 53-187 193-344 (358)
253 2ar0_A M.ecoki, type I restric 99.1 5E-10 1.7E-14 98.5 12.0 110 52-164 168-315 (541)
254 2p41_A Type II methyltransfera 99.1 1.7E-10 6E-15 94.5 8.5 111 37-158 66-188 (305)
255 3lkd_A Type I restriction-modi 99.1 7.4E-09 2.5E-13 91.0 18.4 170 37-207 204-408 (542)
256 3v97_A Ribosomal RNA large sub 99.1 2.3E-09 7.9E-14 97.0 15.3 121 39-161 175-347 (703)
257 3sso_A Methyltransferase; macr 99.1 8.1E-11 2.8E-15 99.0 4.1 93 52-155 215-318 (419)
258 2qfm_A Spermine synthase; sper 99.0 2.1E-10 7E-15 95.4 6.2 111 53-163 188-316 (364)
259 3tqs_A Ribosomal RNA small sub 99.0 6.6E-10 2.2E-14 88.8 8.5 80 51-135 27-107 (255)
260 2cmg_A Spermidine synthase; tr 99.0 2.2E-10 7.5E-15 91.9 5.7 95 53-160 72-170 (262)
261 3ll7_A Putative methyltransfer 99.0 5.5E-10 1.9E-14 94.6 8.4 119 37-160 78-207 (410)
262 1qam_A ERMC' methyltransferase 99.0 2.3E-09 7.9E-14 85.0 11.4 86 42-135 18-105 (244)
263 2ld4_A Anamorsin; methyltransf 99.0 6E-10 2.1E-14 83.6 7.6 112 52-185 11-130 (176)
264 2xyq_A Putative 2'-O-methyl tr 99.0 4.9E-09 1.7E-13 85.1 13.0 126 41-188 49-195 (290)
265 4gqb_A Protein arginine N-meth 99.0 5.1E-10 1.7E-14 99.5 7.7 98 52-155 356-461 (637)
266 3khk_A Type I restriction-modi 99.0 2.6E-09 8.9E-14 94.0 11.9 150 55-207 246-446 (544)
267 1yub_A Ermam, rRNA methyltrans 99.0 2.1E-11 7.1E-16 96.8 -1.5 77 52-136 28-105 (245)
268 3giw_A Protein of unknown func 99.0 2.7E-09 9.2E-14 85.7 9.7 103 55-158 80-197 (277)
269 3fut_A Dimethyladenosine trans 98.9 2.9E-09 9.9E-14 85.7 8.9 76 52-136 46-122 (271)
270 3cvo_A Methyltransferase-like 98.9 2.4E-08 8.2E-13 76.7 11.5 100 53-161 30-152 (202)
271 3s1s_A Restriction endonucleas 98.9 5.5E-08 1.9E-12 88.0 15.2 111 52-165 320-469 (878)
272 3ua3_A Protein arginine N-meth 98.9 2.6E-09 9E-14 95.1 6.4 100 54-155 410-528 (745)
273 2oo3_A Protein involved in cat 98.8 1E-09 3.5E-14 88.0 3.1 151 52-207 90-246 (283)
274 2oyr_A UPF0341 protein YHIQ; a 98.8 1.9E-09 6.5E-14 86.1 4.3 96 55-155 90-194 (258)
275 2r6z_A UPF0341 protein in RSP 98.8 1E-09 3.6E-14 87.8 2.8 82 52-136 82-173 (258)
276 3ftd_A Dimethyladenosine trans 98.8 2E-08 6.9E-13 79.8 9.7 83 45-135 23-106 (249)
277 3evf_A RNA-directed RNA polyme 98.8 9E-09 3.1E-13 82.0 7.6 164 32-205 53-227 (277)
278 3uzu_A Ribosomal RNA small sub 98.8 1.5E-08 5E-13 81.9 8.5 79 51-135 40-125 (279)
279 1m6y_A S-adenosyl-methyltransf 98.7 1.7E-08 6E-13 82.3 6.5 80 52-134 25-108 (301)
280 3gcz_A Polyprotein; flavivirus 98.7 1.8E-08 6E-13 80.5 4.7 162 32-204 69-243 (282)
281 1qyr_A KSGA, high level kasuga 98.7 2E-08 6.8E-13 80.0 5.0 78 52-135 20-101 (252)
282 4fzv_A Putative methyltransfer 98.6 1E-07 3.5E-12 79.5 9.1 134 38-177 136-300 (359)
283 3ufb_A Type I restriction-modi 98.6 2.1E-06 7.3E-11 75.2 17.7 127 52-179 216-383 (530)
284 3o4f_A Spermidine synthase; am 98.5 1.2E-06 4.3E-11 70.8 12.6 147 52-203 82-243 (294)
285 3eld_A Methyltransferase; flav 98.5 5.2E-07 1.8E-11 72.5 8.9 162 32-204 60-233 (300)
286 2qy6_A UPF0209 protein YFCK; s 98.5 5E-07 1.7E-11 72.1 8.7 130 53-190 60-235 (257)
287 3lkz_A Non-structural protein 98.4 1.6E-06 5.4E-11 69.5 10.7 150 31-189 72-232 (321)
288 2px2_A Genome polyprotein [con 98.4 3.2E-07 1.1E-11 72.2 5.5 140 32-187 52-207 (269)
289 2k4m_A TR8_protein, UPF0146 pr 98.4 1.3E-06 4.3E-11 63.1 7.8 94 32-152 18-114 (153)
290 2wk1_A NOVP; transferase, O-me 98.3 1.5E-06 5.1E-11 70.1 8.2 127 52-184 105-266 (282)
291 3p8z_A Mtase, non-structural p 98.3 9.8E-07 3.4E-11 68.5 6.3 149 32-189 57-214 (267)
292 4auk_A Ribosomal RNA large sub 98.3 3E-06 1E-10 70.5 9.4 103 36-154 186-296 (375)
293 3c6k_A Spermine synthase; sper 98.1 4.5E-06 1.5E-10 69.7 7.1 116 40-156 190-326 (381)
294 3b5i_A S-adenosyl-L-methionine 98.0 2.1E-05 7.2E-10 65.9 9.1 108 54-162 53-226 (374)
295 2zig_A TTHA0409, putative modi 98.0 1.2E-05 4.2E-10 65.2 7.2 47 52-99 234-281 (297)
296 1g55_A DNA cytosine methyltran 97.9 0.0001 3.5E-09 61.0 11.9 141 54-202 2-165 (343)
297 3g7u_A Cytosine-specific methy 97.9 0.00011 3.9E-09 61.6 11.8 76 55-136 3-83 (376)
298 2efj_A 3,7-dimethylxanthine me 97.9 7.8E-05 2.7E-09 62.6 10.5 83 54-137 53-162 (384)
299 1g60_A Adenine-specific methyl 97.8 2.1E-05 7.2E-10 62.6 5.5 58 41-99 200-258 (260)
300 3r24_A NSP16, 2'-O-methyl tran 97.8 0.00062 2.1E-08 54.6 12.6 137 40-201 94-253 (344)
301 2c7p_A Modification methylase 97.7 0.00045 1.5E-08 56.8 11.9 72 53-135 10-82 (327)
302 1wg8_A Predicted S-adenosylmet 97.7 3.4E-05 1.2E-09 61.8 5.0 75 52-132 21-97 (285)
303 1m6e_X S-adenosyl-L-methionnin 97.6 5.2E-05 1.8E-09 63.1 5.0 108 54-162 52-210 (359)
304 3ubt_Y Modification methylase 97.6 0.0014 4.7E-08 53.6 13.1 119 56-187 2-140 (331)
305 3qv2_A 5-cytosine DNA methyltr 97.5 0.0041 1.4E-07 51.0 15.2 140 54-202 10-176 (327)
306 3vyw_A MNMC2; tRNA wobble urid 97.5 0.00087 3E-08 54.4 10.9 171 4-190 47-248 (308)
307 4h0n_A DNMT2; SAH binding, tra 97.5 0.0015 5.1E-08 53.8 12.5 137 55-202 4-165 (333)
308 2qrv_A DNA (cytosine-5)-methyl 97.3 0.0005 1.7E-08 55.7 7.2 77 53-135 15-94 (295)
309 2vz8_A Fatty acid synthase; tr 97.2 0.00034 1.2E-08 71.3 5.8 100 53-159 1240-1346(2512)
310 1i4w_A Mitochondrial replicati 97.0 0.0015 5.1E-08 54.2 7.1 58 53-114 58-117 (353)
311 2py6_A Methyltransferase FKBM; 96.6 0.0063 2.2E-07 51.5 8.2 61 52-112 225-292 (409)
312 1boo_A Protein (N-4 cytosine-s 96.6 0.0013 4.5E-08 53.9 3.7 48 51-99 250-298 (323)
313 3tka_A Ribosomal RNA small sub 96.4 0.0047 1.6E-07 50.6 5.6 78 51-133 55-137 (347)
314 3me5_A Cytosine-specific methy 96.0 0.0039 1.3E-07 53.8 3.2 79 54-135 88-180 (482)
315 3tos_A CALS11; methyltransfera 95.9 0.012 4.2E-07 46.5 5.5 135 54-192 70-249 (257)
316 4dcm_A Ribosomal RNA large sub 95.8 0.2 7E-06 41.6 13.1 131 30-176 16-149 (375)
317 1eg2_A Modification methylase 95.7 0.013 4.3E-07 47.9 5.0 59 38-97 227-289 (319)
318 2zig_A TTHA0409, putative modi 95.6 0.023 7.9E-07 45.7 6.3 83 103-187 21-133 (297)
319 4ft4_B DNA (cytosine-5)-methyl 95.4 0.2 6.7E-06 45.8 12.4 42 54-95 212-260 (784)
320 3pvc_A TRNA 5-methylaminomethy 95.2 0.096 3.3E-06 47.1 9.6 127 54-188 59-231 (689)
321 4dkj_A Cytosine-specific methy 94.9 0.33 1.1E-05 40.8 11.4 44 54-97 10-60 (403)
322 3swr_A DNA (cytosine-5)-methyl 94.8 0.083 2.8E-06 49.5 8.2 77 53-135 539-629 (1002)
323 1rjd_A PPM1P, carboxy methyl t 94.3 0.37 1.3E-05 39.5 10.1 107 53-160 97-231 (334)
324 1boo_A Protein (N-4 cytosine-s 94.2 0.086 2.9E-06 43.0 6.1 82 103-187 14-117 (323)
325 3ps9_A TRNA 5-methylaminomethy 93.9 0.23 7.8E-06 44.5 8.7 59 122-188 177-239 (676)
326 3av4_A DNA (cytosine-5)-methyl 93.3 0.17 5.8E-06 48.8 7.0 78 53-136 850-941 (1330)
327 1g60_A Adenine-specific methyl 93.3 0.19 6.4E-06 39.5 6.3 63 121-187 20-96 (260)
328 3s2e_A Zinc-containing alcohol 93.1 0.17 5.9E-06 41.2 6.1 94 51-160 164-262 (340)
329 1f8f_A Benzyl alcohol dehydrog 92.9 0.2 7E-06 41.3 6.3 95 51-160 188-288 (371)
330 2uyo_A Hypothetical protein ML 92.5 0.49 1.7E-05 38.3 7.9 100 55-155 104-212 (310)
331 1zkd_A DUF185; NESG, RPR58, st 92.3 0.75 2.6E-05 38.4 9.0 43 53-95 80-131 (387)
332 1pl8_A Human sorbitol dehydrog 92.0 1.3 4.6E-05 36.1 10.2 95 51-160 169-272 (356)
333 1e3j_A NADP(H)-dependent ketos 91.9 1.3 4.5E-05 36.1 10.0 94 51-160 166-270 (352)
334 3two_A Mannitol dehydrogenase; 91.3 0.3 1E-05 39.8 5.6 88 51-160 174-264 (348)
335 4ej6_A Putative zinc-binding d 91.1 0.69 2.4E-05 38.1 7.6 95 51-160 180-283 (370)
336 4dvj_A Putative zinc-dependent 91.1 1 3.6E-05 36.9 8.6 93 53-160 171-269 (363)
337 3uko_A Alcohol dehydrogenase c 91.0 0.95 3.2E-05 37.3 8.3 95 51-160 191-294 (378)
338 1p0f_A NADP-dependent alcohol 90.6 1.5 5.1E-05 36.0 9.2 95 51-160 189-292 (373)
339 1eg2_A Modification methylase 90.6 0.38 1.3E-05 39.1 5.4 81 104-187 39-137 (319)
340 4fn4_A Short chain dehydrogena 90.2 0.97 3.3E-05 35.4 7.3 80 51-133 4-93 (254)
341 4g81_D Putative hexonate dehyd 90.1 1.1 3.6E-05 35.2 7.4 81 51-134 6-96 (255)
342 3fwz_A Inner membrane protein 90.0 3.5 0.00012 28.6 9.6 115 54-187 7-124 (140)
343 1xg5_A ARPG836; short chain de 89.9 1.7 5.9E-05 33.9 8.7 80 52-133 30-120 (279)
344 3m6i_A L-arabinitol 4-dehydrog 89.9 0.49 1.7E-05 38.8 5.6 98 51-160 177-282 (363)
345 2hwk_A Helicase NSP2; rossman 89.8 0.51 1.7E-05 37.6 5.2 77 123-203 205-295 (320)
346 1kol_A Formaldehyde dehydrogen 89.7 0.88 3E-05 37.8 7.1 100 51-160 183-299 (398)
347 3v2g_A 3-oxoacyl-[acyl-carrier 89.6 4.2 0.00014 31.7 10.6 81 51-134 28-119 (271)
348 3pxx_A Carveol dehydrogenase; 89.5 3.6 0.00012 32.1 10.3 80 52-134 8-109 (287)
349 1pqw_A Polyketide synthase; ro 89.2 0.07 2.4E-06 39.8 -0.1 93 51-160 36-136 (198)
350 3is3_A 17BETA-hydroxysteroid d 89.2 3.1 0.00011 32.3 9.6 80 52-134 16-106 (270)
351 1e3i_A Alcohol dehydrogenase, 89.2 1.7 5.8E-05 35.7 8.4 95 51-160 193-296 (376)
352 3ip1_A Alcohol dehydrogenase, 88.9 2.4 8.1E-05 35.3 9.2 96 51-160 211-317 (404)
353 3ijr_A Oxidoreductase, short c 88.8 4 0.00014 32.2 10.1 79 52-133 45-134 (291)
354 2fzw_A Alcohol dehydrogenase c 88.4 2.6 8.8E-05 34.5 9.0 95 51-160 188-291 (373)
355 3fpc_A NADP-dependent alcohol 88.2 0.67 2.3E-05 37.8 5.2 95 51-160 164-265 (352)
356 3llv_A Exopolyphosphatase-rela 88.2 4.4 0.00015 27.9 8.9 69 54-133 6-79 (141)
357 3uog_A Alcohol dehydrogenase; 88.1 0.57 2E-05 38.5 4.8 93 51-160 187-286 (363)
358 4hp8_A 2-deoxy-D-gluconate 3-d 88.1 4.4 0.00015 31.5 9.6 80 51-134 6-89 (247)
359 3l77_A Short-chain alcohol deh 88.1 5.6 0.00019 29.9 10.2 77 54-134 2-90 (235)
360 2h6e_A ADH-4, D-arabinose 1-de 88.1 0.13 4.6E-06 41.9 0.9 92 53-160 170-268 (344)
361 3grk_A Enoyl-(acyl-carrier-pro 88.0 6.9 0.00024 30.8 11.0 79 52-134 29-119 (293)
362 1cdo_A Alcohol dehydrogenase; 87.9 2.6 9E-05 34.5 8.8 95 51-160 190-293 (374)
363 1v3u_A Leukotriene B4 12- hydr 87.4 1 3.5E-05 36.3 5.8 93 51-160 143-243 (333)
364 3jv7_A ADH-A; dehydrogenase, n 87.4 0.64 2.2E-05 37.8 4.6 95 51-160 169-269 (345)
365 2jhf_A Alcohol dehydrogenase E 87.3 3.3 0.00011 33.9 9.0 95 51-160 189-292 (374)
366 3gaf_A 7-alpha-hydroxysteroid 87.3 2.6 8.9E-05 32.5 8.0 80 52-134 10-99 (256)
367 4e21_A 6-phosphogluconate dehy 87.2 4.3 0.00015 33.3 9.6 118 54-191 22-143 (358)
368 3sx2_A Putative 3-ketoacyl-(ac 87.2 5.7 0.0002 30.8 10.0 80 52-134 11-112 (278)
369 3gms_A Putative NADPH:quinone 86.9 0.86 2.9E-05 37.0 5.1 93 51-160 142-242 (340)
370 3r3s_A Oxidoreductase; structu 86.8 4.6 0.00016 31.8 9.3 80 52-134 47-138 (294)
371 3oig_A Enoyl-[acyl-carrier-pro 86.7 5.8 0.0002 30.5 9.7 81 52-134 5-97 (266)
372 3ojo_A CAP5O; rossmann fold, c 86.4 6.4 0.00022 33.3 10.4 40 53-93 10-52 (431)
373 4imr_A 3-oxoacyl-(acyl-carrier 86.3 3.3 0.00011 32.4 8.1 80 52-134 31-119 (275)
374 2d8a_A PH0655, probable L-thre 86.3 1.3 4.5E-05 36.0 6.0 93 53-160 167-266 (348)
375 1xhl_A Short-chain dehydrogena 86.3 4.1 0.00014 32.2 8.8 80 52-133 24-115 (297)
376 1g0o_A Trihydroxynaphthalene r 86.1 5.8 0.0002 31.0 9.5 79 52-134 27-117 (283)
377 4a2c_A Galactitol-1-phosphate 85.7 3.6 0.00012 33.2 8.3 96 50-160 157-259 (346)
378 3nx4_A Putative oxidoreductase 85.7 1 3.5E-05 36.1 5.0 88 56-160 149-240 (324)
379 4f3n_A Uncharacterized ACR, CO 85.6 1.1 3.8E-05 37.9 5.2 44 54-97 138-188 (432)
380 3nyw_A Putative oxidoreductase 85.6 3.2 0.00011 31.9 7.6 82 52-134 5-97 (250)
381 1rjw_A ADH-HT, alcohol dehydro 85.5 1.5 5.1E-05 35.5 5.9 94 51-160 162-260 (339)
382 4a7p_A UDP-glucose dehydrogena 85.4 6.4 0.00022 33.4 9.9 132 53-195 7-165 (446)
383 3u5t_A 3-oxoacyl-[acyl-carrier 85.1 6 0.0002 30.7 9.1 80 52-134 25-115 (267)
384 2j3h_A NADP-dependent oxidored 85.0 1.2 4E-05 36.1 5.0 94 51-160 153-254 (345)
385 3jyo_A Quinate/shikimate dehyd 85.0 2.5 8.6E-05 33.5 6.8 121 51-184 124-248 (283)
386 3t4x_A Oxidoreductase, short c 85.0 4.4 0.00015 31.4 8.2 81 52-134 8-95 (267)
387 3qwb_A Probable quinone oxidor 84.7 1.2 4.2E-05 35.9 5.0 93 51-160 146-246 (334)
388 4eye_A Probable oxidoreductase 84.7 1 3.6E-05 36.5 4.6 93 51-160 157-256 (342)
389 2c0c_A Zinc binding alcohol de 84.1 2.5 8.6E-05 34.5 6.7 93 51-160 161-260 (362)
390 1ae1_A Tropinone reductase-I; 84.0 3.8 0.00013 31.9 7.4 79 52-134 19-109 (273)
391 3jyn_A Quinone oxidoreductase; 83.7 0.93 3.2E-05 36.5 3.8 92 52-160 139-238 (325)
392 3h7a_A Short chain dehydrogena 83.7 4.2 0.00015 31.2 7.6 80 52-134 5-93 (252)
393 2ae2_A Protein (tropinone redu 83.7 3.7 0.00013 31.6 7.2 78 52-133 7-96 (260)
394 3lf2_A Short chain oxidoreduct 83.5 13 0.00046 28.5 12.5 82 52-134 6-97 (265)
395 4eez_A Alcohol dehydrogenase 1 83.3 3.6 0.00012 33.2 7.2 95 51-160 161-262 (348)
396 1yb5_A Quinone oxidoreductase; 83.2 1.6 5.5E-05 35.6 5.1 92 52-160 169-268 (351)
397 3ucx_A Short chain dehydrogena 83.2 7.3 0.00025 30.0 8.8 78 52-132 9-96 (264)
398 4b7c_A Probable oxidoreductase 83.1 1.2 4.2E-05 35.9 4.4 94 51-160 147-247 (336)
399 2jah_A Clavulanic acid dehydro 82.8 4.8 0.00017 30.7 7.5 78 52-133 5-93 (247)
400 3t7c_A Carveol dehydrogenase; 82.8 11 0.00037 29.7 9.8 80 52-134 26-127 (299)
401 1hxh_A 3BETA/17BETA-hydroxyste 82.7 6.7 0.00023 30.0 8.3 76 52-134 4-90 (253)
402 1xu9_A Corticosteroid 11-beta- 82.5 9.8 0.00034 29.6 9.4 77 52-131 26-113 (286)
403 4da9_A Short-chain dehydrogena 82.5 7.3 0.00025 30.4 8.6 80 52-134 27-117 (280)
404 4dup_A Quinone oxidoreductase; 82.2 0.38 1.3E-05 39.4 1.0 92 52-160 166-264 (353)
405 4egf_A L-xylulose reductase; s 82.2 7.3 0.00025 30.1 8.4 80 52-134 18-108 (266)
406 3dmg_A Probable ribosomal RNA 82.2 8.8 0.0003 31.7 9.3 106 53-176 45-152 (381)
407 3fbg_A Putative arginate lyase 82.1 2.5 8.6E-05 34.2 5.9 91 53-159 150-246 (346)
408 3ioy_A Short-chain dehydrogena 82.1 6.9 0.00023 31.3 8.4 82 52-134 6-97 (319)
409 3l6e_A Oxidoreductase, short-c 81.5 13 0.00044 28.1 9.5 75 54-134 3-87 (235)
410 1zk4_A R-specific alcohol dehy 81.4 6 0.0002 30.0 7.6 77 52-133 4-91 (251)
411 3qiv_A Short-chain dehydrogena 81.2 6.5 0.00022 29.9 7.8 80 52-134 7-96 (253)
412 3rkr_A Short chain oxidoreduct 80.9 5.8 0.0002 30.5 7.4 79 52-134 27-116 (262)
413 3ksu_A 3-oxoacyl-acyl carrier 80.8 4.5 0.00015 31.3 6.7 80 51-134 8-101 (262)
414 3pgx_A Carveol dehydrogenase; 80.7 6 0.00021 30.8 7.5 81 51-134 12-115 (280)
415 2gdz_A NAD+-dependent 15-hydro 80.7 5 0.00017 30.9 7.0 88 52-141 5-103 (267)
416 4gkb_A 3-oxoacyl-[acyl-carrier 80.6 7.1 0.00024 30.4 7.8 80 51-134 4-93 (258)
417 3krt_A Crotonyl COA reductase; 80.4 3 0.0001 35.3 6.0 93 52-160 227-343 (456)
418 3o26_A Salutaridine reductase; 80.3 5.1 0.00017 31.4 7.0 80 52-134 10-101 (311)
419 2j8z_A Quinone oxidoreductase; 80.1 2.2 7.6E-05 34.7 4.9 92 52-160 161-260 (354)
420 3r1i_A Short-chain type dehydr 80.0 7.4 0.00025 30.3 7.8 81 51-134 29-119 (276)
421 3tnl_A Shikimate dehydrogenase 79.8 12 0.00042 30.1 9.1 124 50-185 150-283 (315)
422 3ggo_A Prephenate dehydrogenas 79.8 18 0.00062 28.9 10.2 85 55-155 34-122 (314)
423 3tjr_A Short chain dehydrogena 79.7 9.1 0.00031 30.2 8.3 80 52-134 29-118 (301)
424 1spx_A Short-chain reductase f 79.6 2.9 9.8E-05 32.5 5.3 80 52-133 4-95 (278)
425 3ctm_A Carbonyl reductase; alc 79.5 14 0.00047 28.5 9.2 80 52-134 32-121 (279)
426 1qor_A Quinone oxidoreductase; 79.3 2.7 9.3E-05 33.7 5.1 92 52-160 139-238 (327)
427 2dq4_A L-threonine 3-dehydroge 79.3 2.3 7.9E-05 34.4 4.7 92 53-160 164-261 (343)
428 3tsc_A Putative oxidoreductase 78.8 7.8 0.00027 30.0 7.6 80 52-134 9-111 (277)
429 3trk_A Nonstructural polyprote 78.3 4.2 0.00014 32.1 5.5 63 123-187 210-283 (324)
430 1id1_A Putative potassium chan 78.2 14 0.0005 25.6 8.3 91 54-155 3-99 (153)
431 3dii_A Short-chain dehydrogena 78.1 9.4 0.00032 29.0 7.8 73 54-133 2-84 (247)
432 1ej6_A Lambda2; icosahedral, n 77.9 2.5 8.5E-05 39.7 4.8 117 33-160 801-923 (1289)
433 3uf0_A Short-chain dehydrogena 77.9 9.9 0.00034 29.5 7.9 81 51-134 28-116 (273)
434 2b5w_A Glucose dehydrogenase; 77.7 5.5 0.00019 32.4 6.6 90 55-160 174-272 (357)
435 3rku_A Oxidoreductase YMR226C; 77.5 9.4 0.00032 30.0 7.8 83 52-134 31-125 (287)
436 1xq1_A Putative tropinone redu 77.2 6.2 0.00021 30.2 6.5 78 52-133 12-101 (266)
437 3tfo_A Putative 3-oxoacyl-(acy 77.1 8.1 0.00028 30.0 7.2 79 53-134 3-91 (264)
438 3gaz_A Alcohol dehydrogenase s 76.9 6.4 0.00022 31.8 6.8 90 52-160 149-245 (343)
439 1geg_A Acetoin reductase; SDR 76.8 8.2 0.00028 29.5 7.1 76 54-133 2-88 (256)
440 3c85_A Putative glutathione-re 76.8 18 0.00062 25.9 9.3 70 53-131 38-112 (183)
441 3guy_A Short-chain dehydrogena 76.7 20 0.00068 26.7 9.2 71 56-133 3-81 (230)
442 3gg2_A Sugar dehydrogenase, UD 76.5 26 0.00088 29.6 10.6 37 56-93 4-43 (450)
443 3lyl_A 3-oxoacyl-(acyl-carrier 76.3 10 0.00036 28.6 7.6 79 52-134 3-92 (247)
444 2z1n_A Dehydrogenase; reductas 76.3 9.9 0.00034 29.1 7.5 80 52-134 5-95 (260)
445 3e03_A Short chain dehydrogena 76.1 25 0.00084 27.1 10.8 80 52-134 4-100 (274)
446 3rwb_A TPLDH, pyridoxal 4-dehy 76.1 9.8 0.00034 29.0 7.3 77 52-134 4-90 (247)
447 4a0s_A Octenoyl-COA reductase/ 76.0 3.3 0.00011 34.8 4.9 98 52-160 219-335 (447)
448 1xa0_A Putative NADPH dependen 76.0 2.6 8.9E-05 33.8 4.1 91 52-160 147-245 (328)
449 1fmc_A 7 alpha-hydroxysteroid 75.9 6.5 0.00022 29.8 6.3 78 52-133 9-97 (255)
450 3o38_A Short chain dehydrogena 75.9 14 0.00047 28.3 8.2 81 52-134 20-111 (266)
451 3imf_A Short chain dehydrogena 75.9 6.3 0.00021 30.3 6.2 78 52-133 4-92 (257)
452 3rht_A (gatase1)-like protein; 75.8 11 0.00037 29.5 7.5 77 78-160 6-85 (259)
453 3hn7_A UDP-N-acetylmuramate-L- 75.6 32 0.0011 29.6 11.1 120 52-184 17-151 (524)
454 2dph_A Formaldehyde dismutase; 75.4 2.4 8.4E-05 35.1 3.9 98 51-160 183-298 (398)
455 3ged_A Short-chain dehydrogena 75.3 13 0.00044 28.7 7.8 73 55-134 3-85 (247)
456 1tt7_A YHFP; alcohol dehydroge 75.2 3.2 0.00011 33.3 4.5 93 52-160 148-246 (330)
457 4fs3_A Enoyl-[acyl-carrier-pro 75.2 18 0.00062 27.7 8.7 81 51-133 3-95 (256)
458 3lk7_A UDP-N-acetylmuramoylala 74.9 37 0.0013 28.5 12.4 122 52-185 7-142 (451)
459 3sju_A Keto reductase; short-c 74.9 11 0.00036 29.4 7.3 80 52-134 22-111 (279)
460 4ibo_A Gluconate dehydrogenase 74.8 7.2 0.00025 30.3 6.3 80 52-134 24-113 (271)
461 1jw9_B Molybdopterin biosynthe 74.8 13 0.00045 28.6 7.7 34 53-86 30-65 (249)
462 1e7w_A Pteridine reductase; di 74.5 11 0.00039 29.4 7.5 60 52-115 7-73 (291)
463 3v8b_A Putative dehydrogenase, 74.5 10 0.00034 29.7 7.1 80 52-134 26-115 (283)
464 2g1u_A Hypothetical protein TM 74.4 11 0.00039 26.3 6.8 70 52-131 17-91 (155)
465 1yb1_A 17-beta-hydroxysteroid 74.1 15 0.00052 28.3 8.1 79 52-134 29-118 (272)
466 2y0c_A BCEC, UDP-glucose dehyd 74.1 18 0.00062 30.8 9.1 41 52-93 6-49 (478)
467 3eag_A UDP-N-acetylmuramate:L- 74.0 32 0.0011 27.5 10.9 118 54-184 4-137 (326)
468 3f9i_A 3-oxoacyl-[acyl-carrier 73.9 7.8 0.00027 29.4 6.2 77 51-134 11-94 (249)
469 3tum_A Shikimate dehydrogenase 73.9 30 0.001 27.1 13.2 121 50-185 121-245 (269)
470 3e8x_A Putative NAD-dependent 73.8 25 0.00086 26.1 9.9 71 52-135 19-95 (236)
471 3awd_A GOX2181, putative polyo 73.6 16 0.00056 27.6 8.1 78 52-133 11-99 (260)
472 1yxm_A Pecra, peroxisomal tran 73.6 8.7 0.0003 30.1 6.6 80 52-133 16-109 (303)
473 3tox_A Short chain dehydrogena 73.3 6.8 0.00023 30.6 5.9 79 52-133 6-94 (280)
474 3pwz_A Shikimate dehydrogenase 73.3 16 0.00056 28.6 8.0 114 51-183 117-233 (272)
475 3kvo_A Hydroxysteroid dehydrog 73.2 35 0.0012 27.5 11.1 80 52-134 43-139 (346)
476 3svt_A Short-chain type dehydr 73.2 15 0.0005 28.5 7.8 82 52-134 9-101 (281)
477 2vn8_A Reticulon-4-interacting 73.1 7.4 0.00025 31.8 6.3 94 51-160 181-279 (375)
478 3ftp_A 3-oxoacyl-[acyl-carrier 73.1 12 0.0004 29.0 7.2 79 52-134 26-115 (270)
479 2rhc_B Actinorhodin polyketide 72.8 16 0.00054 28.3 7.9 78 52-133 20-108 (277)
480 4iin_A 3-ketoacyl-acyl carrier 72.7 15 0.00051 28.3 7.7 80 52-134 27-117 (271)
481 1x1t_A D(-)-3-hydroxybutyrate 72.6 7.6 0.00026 29.8 5.9 78 53-134 3-93 (260)
482 1iy8_A Levodione reductase; ox 72.5 18 0.00062 27.7 8.1 80 52-133 11-101 (267)
483 2qhx_A Pteridine reductase 1; 72.4 13 0.00045 29.8 7.5 60 52-115 44-110 (328)
484 2b4q_A Rhamnolipids biosynthes 72.4 6.5 0.00022 30.7 5.5 77 52-133 27-114 (276)
485 3pi7_A NADH oxidoreductase; gr 72.4 15 0.0005 29.6 7.8 88 55-160 166-262 (349)
486 3t4e_A Quinate/shikimate dehyd 72.3 10 0.00034 30.5 6.7 127 50-185 144-277 (312)
487 3uve_A Carveol dehydrogenase ( 72.1 18 0.00061 28.0 8.1 80 52-134 9-114 (286)
488 1sby_A Alcohol dehydrogenase; 71.7 30 0.001 26.1 9.5 85 52-139 3-99 (254)
489 1zem_A Xylitol dehydrogenase; 71.5 16 0.00056 27.9 7.6 78 52-133 5-93 (262)
490 2x9g_A PTR1, pteridine reducta 71.3 29 0.001 26.8 9.2 79 52-134 21-116 (288)
491 3tqh_A Quinone oxidoreductase; 70.9 7.5 0.00026 31.0 5.7 93 50-160 149-244 (321)
492 3g0o_A 3-hydroxyisobutyrate de 70.9 15 0.0005 29.0 7.4 116 55-190 8-129 (303)
493 3h2s_A Putative NADH-flavin re 70.8 24 0.00084 25.8 8.3 94 56-162 2-104 (224)
494 1zcj_A Peroxisomal bifunctiona 70.7 27 0.00092 29.6 9.3 90 55-155 38-144 (463)
495 3edm_A Short chain dehydrogena 70.6 20 0.00067 27.4 7.9 79 52-133 6-95 (259)
496 3l4b_C TRKA K+ channel protien 70.5 22 0.00074 26.4 7.9 87 56-155 2-93 (218)
497 3vtf_A UDP-glucose 6-dehydroge 70.3 22 0.00075 30.1 8.6 37 55-92 22-61 (444)
498 3h8v_A Ubiquitin-like modifier 70.2 15 0.00052 29.2 7.2 35 52-86 34-70 (292)
499 3cxt_A Dehydrogenase with diff 70.2 19 0.00064 28.2 7.8 78 52-133 32-120 (291)
500 3op4_A 3-oxoacyl-[acyl-carrier 70.0 15 0.00051 27.9 7.1 77 52-134 7-93 (248)
No 1
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.84 E-value=1.7e-19 Score=144.95 Aligned_cols=179 Identities=14% Similarity=0.106 Sum_probs=133.6
Q ss_pred EcCeEEEEEeccCcCCCCccccccccccchhHHHHHHHHhcCCCC-CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc
Q 046623 8 IAGNSIIIQELDNVCDSVTGRPLTGAWLWDSALILAQFISTHFDF-QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP 86 (218)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~l~~~l~~~~~~-~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~ 86 (218)
+.+..+.+.+....|.. ...+..+..++.. . ++.+|||+|||+|.+++.+++.+..+|+++|+++
T Consensus 17 ~~~~~~~i~q~~~~~~~-----------~~d~~ll~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~ 82 (259)
T 3lpm_A 17 LLAENLRIIQSPSVFSF-----------SIDAVLLAKFSYL---PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQE 82 (259)
T ss_dssp ETTTTEEEEEBTTTBCC-----------CHHHHHHHHHCCC---CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSH
T ss_pred ccCCCEEEEeCCCCccC-----------cHHHHHHHHHhcC---CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCH
Confidence 34455666665554443 3456677777532 3 6789999999999999999887666999999999
Q ss_pred -hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCC--------------------cchHHHHH
Q 046623 87 -LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP--------------------EEMVGLGK 145 (218)
Q Consensus 87 -~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~--------------------~~~~~~l~ 145 (218)
+++.+++|++.+++.+++.++.+|+.+... ..+.++||+|++++|++.. .....+++
T Consensus 83 ~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~--~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~ 160 (259)
T 3lpm_A 83 RLADMAKRSVAYNQLEDQIEIIEYDLKKITD--LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIR 160 (259)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEECSCGGGGGG--TSCTTCEEEEEECCCC-----------------------HHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcccEEEEECcHHHhhh--hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHH
Confidence 999999999999988889999988876532 1135789999999988654 23567999
Q ss_pred HHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE-EccCCCCCCCceeEEEecC
Q 046623 146 TLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL-TCQLGGGCPEAFAVYELIP 206 (218)
Q Consensus 146 ~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~-~~~~~~~~~~~~~l~~~~~ 206 (218)
.+.++|+|||.++++ .. .....+....+ .+.+|....+ ++...++++..+.+.+..+
T Consensus 161 ~~~~~LkpgG~l~~~-~~--~~~~~~~~~~l-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 161 VAASLLKQGGKANFV-HR--PERLLDIIDIM-RKYRLEPKRIQFVHPRSDREANTVLVEGIK 218 (259)
T ss_dssp HHHHHEEEEEEEEEE-EC--TTTHHHHHHHH-HHTTEEEEEEEEEESSTTSCCSEEEEEEEE
T ss_pred HHHHHccCCcEEEEE-Ec--HHHHHHHHHHH-HHCCCceEEEEEeecCCCCCcEEEEEEEEe
Confidence 999999999944443 22 23455555555 8899999887 7888888888888877654
No 2
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.80 E-value=1e-18 Score=142.06 Aligned_cols=159 Identities=26% Similarity=0.331 Sum_probs=111.8
Q ss_pred cccccccccchhHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecC-cc-hHHHHHHHH-----HHh
Q 046623 27 GRPLTGAWLWDSALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDV-KP-LLPGLINNV-----EAN 98 (218)
Q Consensus 27 ~~~~~g~~~w~~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~-~~-~~~~a~~~~-----~~~ 98 (218)
....+|..+|+.+..+.+++.... ..++.+|||+|||+|.+++.+++.+..+|+++|+ ++ +++.+++|+ +.+
T Consensus 52 ~~~~~g~~~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~ 131 (281)
T 3bzb_A 52 EHPLWTSHVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSC 131 (281)
T ss_dssp ----------CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC---
T ss_pred CCCCCCceeecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhc
Confidence 456788899999999999998743 2567899999999999999998887669999999 89 999999999 444
Q ss_pred CCC----CceEEEEeecCCCCccccc--cCCCCcEEEEcccccCCcchHHHHHHHHHHhc---C--CCceEEEEEeeccC
Q 046623 99 GLG----GRVEVRELVWGSDDLSQLS--ELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCG---T--GRHTVVWAVSEVRT 167 (218)
Q Consensus 99 ~~~----~~~~~~~~d~~~~~~~~~~--~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~---~--gG~~~i~~~~~~~~ 167 (218)
++. .++.+..+||.+....... ..++||+|++.+++++......+++.+.++|+ | ||.++++ ....+.
T Consensus 132 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~-~~~~~~ 210 (281)
T 3bzb_A 132 SSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT-FTHHRP 210 (281)
T ss_dssp -------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE-ECC---
T ss_pred ccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE-EEeeec
Confidence 443 3588888888764321110 24689999999999998899999999999999 9 9944443 333222
Q ss_pred ----ChHHHHHHHHHhCC-cEEEEE
Q 046623 168 ----RTGDCLHELIMSQG-FRVIEL 187 (218)
Q Consensus 168 ----~~~~~~~~~~~~~g-f~~~~~ 187 (218)
...+++..+ .+.| |.+..+
T Consensus 211 ~~~~~~~~~~~~l-~~~G~f~v~~~ 234 (281)
T 3bzb_A 211 HLAERDLAFFRLV-NADGALIAEPW 234 (281)
T ss_dssp -----CTHHHHHH-HHSTTEEEEEE
T ss_pred ccchhHHHHHHHH-HhcCCEEEEEe
Confidence 244556655 8899 998877
No 3
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.75 E-value=8.8e-17 Score=135.82 Aligned_cols=155 Identities=21% Similarity=0.199 Sum_probs=119.3
Q ss_pred EEEEcCeEEEEEeccCcCCCCccccccccccchhHHHHHHHHhcC---CCCCCCeEEEECCCCCHHHHHHHHhCCCeEEE
Q 046623 5 EIEIAGNSIIIQELDNVCDSVTGRPLTGAWLWDSALILAQFISTH---FDFQNKSVLELGAGAGLPGLTAARLGATRVVL 81 (218)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~l~~~l~~~---~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~ 81 (218)
++.+.+.++++...+++|.....+ ..+..+.+.+... ...++.+|||+|||+|.+++.+++.+. +|++
T Consensus 190 ~~~~~g~~~~~~~~pgvFs~~~~d--------~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~g 260 (381)
T 3dmg_A 190 SARILGAEYTFHHLPGVFSAGKVD--------PASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVG 260 (381)
T ss_dssp EEEETTEEEEEEECTTCTTTTSCC--------HHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEE
T ss_pred eEEecCceEEEEeCCCceeCCCCC--------HHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEE
Confidence 456778889999999998865433 5566666666541 235678999999999999999998865 9999
Q ss_pred ecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccC-----CcchHHHHHHHHHHhcCCC
Q 046623 82 TDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYD-----PEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 82 ~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~-----~~~~~~~l~~~~~lL~~gG 155 (218)
+|+++ +++.+++|++.+++. ++++..|+.+... ..++||+|++++++++ ......+++.+.++|+|||
T Consensus 261 vDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~----~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG 334 (381)
T 3dmg_A 261 VEDDLASVLSLQKGLEANALK--AQALHSDVDEALT----EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGG 334 (381)
T ss_dssp EESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSC----TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccc----cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCc
Confidence 99999 999999999998865 8899988876643 3478999999999987 4567889999999999999
Q ss_pred ceEEEEEeeccCChHHHHHHH
Q 046623 156 HTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 156 ~~~i~~~~~~~~~~~~~~~~~ 176 (218)
.+++++. . .......+...
T Consensus 335 ~l~iv~n-~-~l~~~~~l~~~ 353 (381)
T 3dmg_A 335 VFFLVSN-P-FLKYEPLLEEK 353 (381)
T ss_dssp EEEEEEC-T-TSCHHHHHHHH
T ss_pred EEEEEEc-C-CCChHHHHHHh
Confidence 4444332 2 23334444444
No 4
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=2.2e-17 Score=132.78 Aligned_cols=162 Identities=19% Similarity=0.171 Sum_probs=117.7
Q ss_pred hhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHH---hCCCCceEEEEeec
Q 046623 37 DSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEA---NGLGGRVEVRELVW 111 (218)
Q Consensus 37 ~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~---~~~~~~~~~~~~d~ 111 (218)
..+..|..++.. .++.+|||+|||+|.+++.++... ..+++++|+++ +++.+++|+.. +++.++++++.+|+
T Consensus 23 ~D~~lL~~~~~~---~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~ 99 (260)
T 2ozv_A 23 MDAMLLASLVAD---DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV 99 (260)
T ss_dssp CHHHHHHHTCCC---CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT
T ss_pred cHHHHHHHHhcc---cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCH
Confidence 345556665432 456799999999999999998764 35999999999 99999999988 88777799999998
Q ss_pred CCCCccc---cccCCCCcEEEEcccccCC------------------cchHHHHHHHHHHhcCCCceEEEEEeeccCChH
Q 046623 112 GSDDLSQ---LSELGEFDMVIMSDVFYDP------------------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTG 170 (218)
Q Consensus 112 ~~~~~~~---~~~~~~~D~Iv~~~~~~~~------------------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~ 170 (218)
.+..... ..+.++||+|++++|++.. .....+++.+.++|+|||.++++ ... ....
T Consensus 100 ~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~-~~~--~~~~ 176 (260)
T 2ozv_A 100 TLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI-SRP--QSVA 176 (260)
T ss_dssp TCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE-ECG--GGHH
T ss_pred HHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE-EcH--HHHH
Confidence 7652100 0135789999999888653 23778999999999999944443 222 2344
Q ss_pred HHHHHHHHhCCcEEEEE-EccCCCCCCCceeEEEecC
Q 046623 171 DCLHELIMSQGFRVIEL-TCQLGGGCPEAFAVYELIP 206 (218)
Q Consensus 171 ~~~~~~~~~~gf~~~~~-~~~~~~~~~~~~~l~~~~~ 206 (218)
+.+..+ .+ .|....+ ++....+++..+++.++.+
T Consensus 177 ~~~~~l-~~-~~~~~~i~~v~~~~~~~~~~~lv~~~k 211 (260)
T 2ozv_A 177 EIIAAC-GS-RFGGLEITLIHPRPGEDAVRMLVTAIK 211 (260)
T ss_dssp HHHHHH-TT-TEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred HHHHHH-Hh-cCCceEEEEEcCCCCCCceEEEEEEEe
Confidence 555555 55 4877666 7777888888888877654
No 5
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.73 E-value=1e-16 Score=126.06 Aligned_cols=149 Identities=17% Similarity=0.195 Sum_probs=105.1
Q ss_pred CCCCeEEEECCC-CCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAG-AGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G-~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+||| +|.+++.+++....+|+++|+++ +++.+++|++.++. +++++.+|+..... . +.++||+|+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~-~~~~fD~I~ 128 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKG--V-VEGTFDVIF 128 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTT--T-CCSCEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhh--c-ccCceeEEE
Confidence 467899999999 99999999877345999999999 99999999999887 58999988643321 1 347899999
Q ss_pred EcccccCCcc-------------------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEcc
Q 046623 130 MSDVFYDPEE-------------------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 130 ~~~~~~~~~~-------------------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
+++|++.... ...+++.+.++|+|||.++++.... .....+.... +.+.||.+..+...
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~-l~~~g~~~~~~~~~ 206 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-EKLLNVIKER-GIKLGYSVKDIKFK 206 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-HHHHHHHHHH-HHHTTCEEEEEEEC
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-HhHHHHHHHH-HHHcCCceEEEEec
Confidence 9988765332 4789999999999999444443321 1233344444 48999988877442
Q ss_pred CCCCCCCceeEEEecCCccc
Q 046623 191 LGGGCPEAFAVYELIPPMHE 210 (218)
Q Consensus 191 ~~~~~~~~~~l~~~~~~~~~ 210 (218)
.+ .....++.+.++-..
T Consensus 207 --~g-~~~~~~l~f~~~~~~ 223 (230)
T 3evz_A 207 --VG-TRWRHSLIFFKGISE 223 (230)
T ss_dssp --CC-C-CEEEEEEECCC--
T ss_pred --CC-CeEEEEEEEeccccc
Confidence 22 244556666665333
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.73 E-value=2.1e-16 Score=127.27 Aligned_cols=143 Identities=17% Similarity=0.090 Sum_probs=111.0
Q ss_pred HHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc
Q 046623 41 ILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 41 ~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (218)
.+.+.+.. ....++.+|||+|||+|.++..+++....+|+++|+++ +++.++++....++.+++.++.+|+.+...
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 125 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF-- 125 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC--
Confidence 34444433 33457789999999999999999875445999999999 999999999988887789999999876543
Q ss_pred cccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc---------------------CChHHHHHHHH
Q 046623 119 LSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR---------------------TRTGDCLHELI 177 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~---------------------~~~~~~~~~~~ 177 (218)
+.++||+|++..++++..+...+++.+.++|+|||.+++....... ....+.+..++
T Consensus 126 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 203 (273)
T 3bus_A 126 --EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDV 203 (273)
T ss_dssp --CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred --CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999955554332211 11223445555
Q ss_pred HhCCcEEEEE
Q 046623 178 MSQGFRVIEL 187 (218)
Q Consensus 178 ~~~gf~~~~~ 187 (218)
++.||.+..+
T Consensus 204 ~~aGf~~~~~ 213 (273)
T 3bus_A 204 RQAELVVTST 213 (273)
T ss_dssp HHTTCEEEEE
T ss_pred HHcCCeEEEE
Confidence 8899998776
No 7
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.73 E-value=1.8e-16 Score=126.42 Aligned_cols=131 Identities=13% Similarity=0.097 Sum_probs=105.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+..+|+++|+++ +++.+++++...++.+++.++.+|+.+... +.++||+|++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD~v~~ 120 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF----QNEELDLIWS 120 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS----CTTCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC----CCCCEEEEEe
Confidence 46779999999999999999887656999999999 999999999999988889999999866543 5678999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc-----------------CChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR-----------------TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~-----------------~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++++. +...+++.+.++|+|||.+++....... ....+.+..++.+.||....+
T Consensus 121 ~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 121 EGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp ESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred cChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 9999887 7899999999999999955444332111 012233445559999998886
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=1.5e-16 Score=127.97 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=106.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+..+|+++|+++ +++.++++++..++.++++++.+|+.+... +.++||+|++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF----RNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC----CTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC----CCCCEEEEEE
Confidence 56789999999999999999887666999999999 999999999999988889999999876543 5678999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC-----------------ChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT-----------------RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~-----------------~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++++. +...+++.+.++|+|||.+++........ ...+.+..++.+.||....+
T Consensus 121 ~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 121 EGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp SSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred cCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 9999887 88999999999999999555443321110 12233444558999999877
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.72 E-value=2.1e-16 Score=125.20 Aligned_cols=144 Identities=13% Similarity=0.116 Sum_probs=112.0
Q ss_pred cchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 35 LWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 35 ~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
.|++...+...+.- .++.+|||+|||+|.++..++..+. +++++|+++ +++.+++++...+.. ++.+..+|+..
T Consensus 6 ~~~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 80 (239)
T 1xxl_A 6 HHHSLGLMIKTAEC---RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAES 80 (239)
T ss_dssp CHHHHHHHHHHHTC---CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTB
T ss_pred cCCCcchHHHHhCc---CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEeccccc
Confidence 35565555555543 5678999999999999999988765 999999999 999999999888765 48999998876
Q ss_pred CCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEee---------------------ccCChHHH
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSE---------------------VRTRTGDC 172 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~---------------------~~~~~~~~ 172 (218)
... +.++||+|+++.++++..+...++..+.++|+|||.+++..... .+....+.
T Consensus 81 ~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (239)
T 1xxl_A 81 LPF----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSE 156 (239)
T ss_dssp CCS----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHH
T ss_pred CCC----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHH
Confidence 543 55789999999999999999999999999999999555443221 11223344
Q ss_pred HHHHHHhCCcEEEEE
Q 046623 173 LHELIMSQGFRVIEL 187 (218)
Q Consensus 173 ~~~~~~~~gf~~~~~ 187 (218)
+..++.+.||.+..+
T Consensus 157 ~~~ll~~aGf~~~~~ 171 (239)
T 1xxl_A 157 WQAMFSANQLAYQDI 171 (239)
T ss_dssp HHHHHHHTTEEEEEE
T ss_pred HHHHHHHCCCcEEEE
Confidence 555568899997766
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.72 E-value=3.8e-17 Score=126.89 Aligned_cols=101 Identities=14% Similarity=0.216 Sum_probs=89.3
Q ss_pred CeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEccc
Q 046623 55 KSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDV 133 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~ 133 (218)
.+|||+|||+|..+..+++.+..+++++|+++ +++.+++++...+...++++..+|+.+... +.++||+|+++.+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI----EDNYADLIVSRGS 120 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS----CTTCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC----CcccccEEEECch
Confidence 39999999999999999877445999999999 999999999998887789999999876543 5678999999999
Q ss_pred ccCCcchHHHHHHHHHHhcCCCceEE
Q 046623 134 FYDPEEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 134 ~~~~~~~~~~l~~~~~lL~~gG~~~i 159 (218)
+++..+...+++.+.++|+|||.+++
T Consensus 121 l~~~~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 121 VFFWEDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred HhhccCHHHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999994333
No 11
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.72 E-value=4.3e-16 Score=128.18 Aligned_cols=131 Identities=11% Similarity=0.021 Sum_probs=106.4
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
..++.+|||+|||+|.++..+++. +. +|+++|+++ +++.++++++.+++..+++++.+|+.+... +.++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF----DKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC----CTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC----CCCCEeEE
Confidence 356789999999999999999876 54 999999999 999999999999988789999999876543 56799999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC-------------------ChHHHHHHHHHhCCcEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT-------------------RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~-------------------~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++.++++. +...+++.+.++|+|||.+++........ ...+.+..++++.||.+..+
T Consensus 190 ~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 190 WNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp EEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred EECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999999887 59999999999999999555544322211 12344555669999998877
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.71 E-value=2.1e-16 Score=125.95 Aligned_cols=134 Identities=16% Similarity=0.060 Sum_probs=105.1
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
....++.+|||+|||+|..+..+++....+++++|+++ +++.++++++..++..++.+..+|+.+.. ..++||+
T Consensus 32 ~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~fD~ 106 (256)
T 1nkv_A 32 LRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-----ANEKCDV 106 (256)
T ss_dssp TCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----CSSCEEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-----cCCCCCE
Confidence 33457789999999999999999866344999999999 99999999998888777999999887653 2578999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc------------------CChHHHHHHHHHhCCcEEEEE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR------------------TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~------------------~~~~~~~~~~~~~~gf~~~~~ 187 (218)
|++..++++..+..++++.+.++|||||.+++....... ....+.+..++.+.||....+
T Consensus 107 V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 107 AACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred EEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 999999998889999999999999999955444322111 112234455558999987665
No 13
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=1.2e-16 Score=121.43 Aligned_cols=145 Identities=12% Similarity=0.001 Sum_probs=98.8
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|..+..+++. ..+|+++|+++ +++.++++++.+++ .+++++..+...... ...++||+|+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~---~~~~~fD~v~ 94 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDH---YVREPIRAAI 94 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGG---TCCSCEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHh---hccCCcCEEE
Confidence 356789999999999999999887 45999999999 99999999999887 568888755543211 1356899999
Q ss_pred EcccccCC---------cchHHHHHHHHHHhcCCCceEEEEEeeccC------ChHHHHHHHHHhCCcEEEEEEccCCCC
Q 046623 130 MSDVFYDP---------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRT------RTGDCLHELIMSQGFRVIELTCQLGGG 194 (218)
Q Consensus 130 ~~~~~~~~---------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~------~~~~~~~~~~~~~gf~~~~~~~~~~~~ 194 (218)
++..+... .....+++.+.++|+|||.+++........ ...+.+..+ ...+|.+.......+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~ 173 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGL-DQRVFTAMLYQPLNQIN 173 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHS-CTTTEEEEEEEESSCSS
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhC-CCceEEEEEehhhccCC
Confidence 87443222 345678899999999999555554322111 122223333 45678888886655545
Q ss_pred CCCceeE
Q 046623 195 CPEAFAV 201 (218)
Q Consensus 195 ~~~~~~l 201 (218)
.+....+
T Consensus 174 ~~~~~~~ 180 (185)
T 3mti_A 174 TPPFLVM 180 (185)
T ss_dssp CCCEEEE
T ss_pred CCCeEEE
Confidence 5544443
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.70 E-value=3.5e-16 Score=125.20 Aligned_cols=130 Identities=20% Similarity=0.152 Sum_probs=103.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +++++|+++ +++.+++++...+.. ++.+..+|+..... +.++||+|++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~----~~~~fD~V~~ 109 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPF----TDERFHIVTC 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCS----CTTCEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCC----CCCCEEEEEE
Confidence 4678999999999999999988765 999999999 999999999887765 58999999876543 5678999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeec---------------------cCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV---------------------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---------------------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++++..+...++.++.++|+|||.+++...... +....+.+..++.+.||.+..+
T Consensus 110 ~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 187 (260)
T 1vl5_A 110 RIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEEL 187 (260)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEE
T ss_pred hhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEE
Confidence 99999999999999999999999995554322210 1122334555558899998766
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=2.7e-16 Score=127.53 Aligned_cols=131 Identities=17% Similarity=0.196 Sum_probs=105.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.++..+++.+. +++++|+++ +++.+++++...++..++.++.+|+.+... ...++||+|+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS---HLETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG---GCSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh---hcCCCceEEEEC
Confidence 467999999999999999988865 999999999 999999999988876679999998876541 146789999999
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEEEEeec------------------------------cCChHHHHHHHHHhCC
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV------------------------------RTRTGDCLHELIMSQG 181 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~------------------------------~~~~~~~~~~~~~~~g 181 (218)
.++++..+...+++.+.++|+|||.+++...... +....+.+..++++.|
T Consensus 144 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 223 (285)
T 4htf_A 144 AVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAG 223 (285)
T ss_dssp SCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTT
T ss_pred chhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCC
Confidence 9999999999999999999999995444432110 1123345566669999
Q ss_pred cEEEEE
Q 046623 182 FRVIEL 187 (218)
Q Consensus 182 f~~~~~ 187 (218)
|.+..+
T Consensus 224 f~v~~~ 229 (285)
T 4htf_A 224 WQIMGK 229 (285)
T ss_dssp CEEEEE
T ss_pred Cceeee
Confidence 999876
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.70 E-value=4.3e-16 Score=121.39 Aligned_cols=131 Identities=21% Similarity=0.179 Sum_probs=105.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC--CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG--ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~--~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..+++.+ ..+++++|+++ +++.+++++...+.. ++.+..+|+.+... +.++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~----~~~~fD~v 110 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPL----PDNTVDFI 110 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSS----CSSCEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCC----CCCCeeEE
Confidence 467799999999999999998664 35999999999 999999999888875 59999999876543 56789999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeec---------cCChHHHHHHHHHhCCcEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV---------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++.++++..+...+++.+.++|+|||.+++...... .....+.+..++.+.||.+..+
T Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 111 FMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp EEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred EeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999999999994444332211 1123455556669999998876
No 17
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.70 E-value=8.2e-16 Score=119.92 Aligned_cols=150 Identities=17% Similarity=0.181 Sum_probs=110.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCC----ceEEEEeecCCCCccccccCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGG----RVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
.++.+|||+|||+|.++..+++.+. .+++++|+++ +++.+++++..+++.. +++++.+|+..... ..++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~f 103 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK----RFSGY 103 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG----GGTTC
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc----ccCCC
Confidence 4677999999999999999987654 6999999999 9999999987776543 69999998854433 45789
Q ss_pred cEEEEcccccCCcch--HHHHHHHHHHhcCCCceEEEEEeecc-------------------CChHHHHH----HHHHhC
Q 046623 126 DMVIMSDVFYDPEEM--VGLGKTLKRVCGTGRHTVVWAVSEVR-------------------TRTGDCLH----ELIMSQ 180 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~--~~~l~~~~~lL~~gG~~~i~~~~~~~-------------------~~~~~~~~----~~~~~~ 180 (218)
|+|+++.++++..+. ..+++.+.++|+||| +++....... ....+.+. .++.+.
T Consensus 104 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 182 (219)
T 3jwg_A 104 DAATVIEVIEHLDENRLQAFEKVLFEFTRPQT-VIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKY 182 (219)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSE-EEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHH
T ss_pred CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCE-EEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHC
Confidence 999999999988744 799999999999998 3333222211 01223333 556889
Q ss_pred CcEEEEEEc---cCCCCCCCceeEEEecC
Q 046623 181 GFRVIELTC---QLGGGCPEAFAVYELIP 206 (218)
Q Consensus 181 gf~~~~~~~---~~~~~~~~~~~l~~~~~ 206 (218)
||.+....+ .+..+.+....+++...
T Consensus 183 Gf~v~~~~~g~~~~~~g~~~qi~~~~~~~ 211 (219)
T 3jwg_A 183 GYSVRFLQIGEIDDEFGSPTQMGVFTLGA 211 (219)
T ss_dssp TEEEEEEEESCCCTTSCCSEEEEEEEECC
T ss_pred CcEEEEEecCCccccCCCCeEEEEEeccC
Confidence 999877733 33346666666666544
No 18
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.70 E-value=1.8e-16 Score=125.06 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=107.5
Q ss_pred HHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc
Q 046623 40 LILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 40 ~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (218)
..+..++... ..++.+|||+|||+|..+..+++.+. +|+++|+++ +++.++++....+...++.++.+|+.+..
T Consensus 54 ~~l~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 128 (235)
T 3lcc_A 54 PLIVHLVDTS-SLPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--- 128 (235)
T ss_dssp HHHHHHHHTT-CSCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---
T ss_pred HHHHHHHHhc-CCCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC---
Confidence 3455555442 23456999999999999999977655 899999999 99999999876544456999999987654
Q ss_pred cccCCCCcEEEEcccccCCc--chHHHHHHHHHHhcCCCceEEEEEeecc-------CChHHHHHHHHHhCCcEEEEE
Q 046623 119 LSELGEFDMVIMSDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEVR-------TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~~-------~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++||+|+++.++++.. +...+++.+.++|+|||.+++....... ....+.+..++.+.||.+..+
T Consensus 129 --~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 129 --PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp --CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred --CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 446899999999998766 8899999999999999954444332211 123455666669999999887
No 19
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.70 E-value=4e-16 Score=122.43 Aligned_cols=130 Identities=19% Similarity=0.220 Sum_probs=103.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC----CceEEEEeecCCCCccccccCCCCcE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG----GRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++....+.. .++.+...|+..... +.++||+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~ 104 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF----HDSSFDF 104 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS----CTTCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC----CCCceeE
Confidence 677999999999999999988865 999999999 999999998776652 347888888776543 5678999
Q ss_pred EEEcccccCCcchH---HHHHHHHHHhcCCCceEEEEEee-------------------------------------ccC
Q 046623 128 VIMSDVFYDPEEMV---GLGKTLKRVCGTGRHTVVWAVSE-------------------------------------VRT 167 (218)
Q Consensus 128 Iv~~~~~~~~~~~~---~~l~~~~~lL~~gG~~~i~~~~~-------------------------------------~~~ 167 (218)
|+++.++++..+.. .+++.+.++|+|||.+++..... .+.
T Consensus 105 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (235)
T 3sm3_A 105 AVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHH 184 (235)
T ss_dssp EEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEEC
T ss_pred EEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEe
Confidence 99999999887777 89999999999999555443211 122
Q ss_pred ChHHHHHHHHHhCCcEEEEE
Q 046623 168 RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 168 ~~~~~~~~~~~~~gf~~~~~ 187 (218)
...+.+..++++.||.+..+
T Consensus 185 ~~~~~l~~ll~~aGf~~~~~ 204 (235)
T 3sm3_A 185 FTEKELVFLLTDCRFEIDYF 204 (235)
T ss_dssp BCHHHHHHHHHTTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCEEEEE
Confidence 34556666669999999887
No 20
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=3.3e-15 Score=115.36 Aligned_cols=127 Identities=15% Similarity=0.082 Sum_probs=97.9
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 50 FDFQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 50 ~~~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
...++.+|||+|||+|..+..+++.+ ..+++++|+++ +++.++++++.++. .+++++.+|+.+... ..++||+
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~----~~~~~D~ 111 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLD----DLPDPDR 111 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCT----TSCCCSE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhh----cCCCCCE
Confidence 33567899999999999999998775 36999999999 99999999999887 569999988765432 3367999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
|+++.+++ ....+++.+.++|+|||.+++ .........+....+ .+.||.+...
T Consensus 112 i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~--~~~~~~~~~~~~~~l-~~~g~~~~~~ 165 (204)
T 3e05_A 112 VFIGGSGG---MLEEIIDAVDRRLKSEGVIVL--NAVTLDTLTKAVEFL-EDHGYMVEVA 165 (204)
T ss_dssp EEESCCTT---CHHHHHHHHHHHCCTTCEEEE--EECBHHHHHHHHHHH-HHTTCEEEEE
T ss_pred EEECCCCc---CHHHHHHHHHHhcCCCeEEEE--EecccccHHHHHHHH-HHCCCceeEE
Confidence 99987664 778999999999999994333 333233444445554 8999854443
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.69 E-value=4e-16 Score=124.77 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=108.1
Q ss_pred hhHHHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 37 DSALILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 37 ~~~~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
+....+.+.+.. ....++.+|||+|||+|.++..+++....+|+++|+++ +++.++++.... .+++++.+|+.+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK 114 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC
Confidence 344444444444 33456789999999999999999865234999999999 999998886554 4589999998776
Q ss_pred CccccccCCCCcEEEEcccccCC--cchHHHHHHHHHHhcCCCceEEEEEeecc------------------CChHHHHH
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEVR------------------TRTGDCLH 174 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~~------------------~~~~~~~~ 174 (218)
.. +.++||+|+++.++++. .+...+++.+.++|+|||.+++....... ....+.+.
T Consensus 115 ~~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (266)
T 3ujc_A 115 EF----PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYA 190 (266)
T ss_dssp CC----CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred CC----CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHH
Confidence 43 56899999999999998 89999999999999999955444322211 11334555
Q ss_pred HHHHhCCcEEEEE
Q 046623 175 ELIMSQGFRVIEL 187 (218)
Q Consensus 175 ~~~~~~gf~~~~~ 187 (218)
.++.+.||....+
T Consensus 191 ~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 191 DILTACNFKNVVS 203 (266)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCeEEEE
Confidence 6669999998776
No 22
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.69 E-value=9.3e-16 Score=125.04 Aligned_cols=132 Identities=15% Similarity=0.117 Sum_probs=106.2
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
..++.+|||+|||+|..+..+++. +. +++++|+++ +++.++++....+...++.++.+|+.+... +.++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----EDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----CTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC----CCCCEeEE
Confidence 356789999999999999999765 65 999999999 999999999988887789999999877543 56789999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc------------------CChHHHHHHHHHhCCcEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR------------------TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~------------------~~~~~~~~~~~~~~gf~~~~~ 187 (218)
++..++++..+...+++.+.++|+|||.+++....... ....+.+..++.+.||.+..+
T Consensus 155 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 155 WSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred EecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 99999999889999999999999999955544332211 012233445558999998876
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.69 E-value=4.6e-16 Score=123.97 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=88.4
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
....++.+|||+|||+|..+..+++.+..+++++|+++ +++.++++.. ..++.++.+|+.+... +.++||+
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~----~~~~fD~ 111 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAI----EPDAYNV 111 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCC----CTTCEEE
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCC----CCCCeEE
Confidence 33457889999999999999999888776999999999 9999988765 2458999988865543 5688999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+++.++++..+...+++.+.++|+|||.+++.
T Consensus 112 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 112 VLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 999999999999999999999999999954443
No 24
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.69 E-value=9.4e-17 Score=124.36 Aligned_cols=144 Identities=10% Similarity=-0.002 Sum_probs=103.0
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC-----------CCCceE
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG-----------LGGRVE 105 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~-----------~~~~~~ 105 (218)
....+.+++......++.+|||+|||+|..+..+++.|. +|+++|+|+ +++.++++..... ...+++
T Consensus 7 ~~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 7 VNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp STHHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred CCHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 334566666553334678999999999999999998876 999999999 9999987754210 014589
Q ss_pred EEEeecCCCCccccccC-CCCcEEEEcccccCCc--chHHHHHHHHHHhcCCCceEEEEEeecc--------CChHHHHH
Q 046623 106 VRELVWGSDDLSQLSEL-GEFDMVIMSDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEVR--------TRTGDCLH 174 (218)
Q Consensus 106 ~~~~d~~~~~~~~~~~~-~~~D~Iv~~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~~--------~~~~~~~~ 174 (218)
++.+|+.+... .. ++||+|++..++++.. +...+++.+.++|||||.+++++..... ....+.+.
T Consensus 86 ~~~~d~~~l~~----~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~ 161 (203)
T 1pjz_A 86 IWCGDFFALTA----RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLH 161 (203)
T ss_dssp EEEECCSSSTH----HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHH
T ss_pred EEECccccCCc----ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHH
Confidence 99999877653 32 6899999988877653 4567899999999999953444332211 12345555
Q ss_pred HHHHhCCcEEEEE
Q 046623 175 ELIMSQGFRVIEL 187 (218)
Q Consensus 175 ~~~~~~gf~~~~~ 187 (218)
.++.. ||.+..+
T Consensus 162 ~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 162 RVMSG-NWEVTKV 173 (203)
T ss_dssp HTSCS-SEEEEEE
T ss_pred HHhcC-CcEEEEe
Confidence 55465 9998777
No 25
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=3.2e-16 Score=119.73 Aligned_cols=101 Identities=22% Similarity=0.265 Sum_probs=86.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.+++.+++.+..+|+++|+++ +++.+++|++.+++ .+++++.+|+.+.... .+.++||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~--~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAA--GTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHH--CCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhh--ccCCCccEEEE
Confidence 57889999999999999988777777899999999 99999999999987 4699999887654210 13578999999
Q ss_pred cccccCC-cchHHHHHHHHH--HhcCCC
Q 046623 131 SDVFYDP-EEMVGLGKTLKR--VCGTGR 155 (218)
Q Consensus 131 ~~~~~~~-~~~~~~l~~~~~--lL~~gG 155 (218)
+++++.. ++..+++..+.+ +|+|||
T Consensus 120 ~~p~~~~~~~~~~~l~~~~~~~~L~pgG 147 (189)
T 3p9n_A 120 DPPYNVDSADVDAILAALGTNGWTREGT 147 (189)
T ss_dssp CCCTTSCHHHHHHHHHHHHHSSSCCTTC
T ss_pred CCCCCcchhhHHHHHHHHHhcCccCCCe
Confidence 9887764 678899999999 999999
No 26
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.69 E-value=9e-16 Score=129.44 Aligned_cols=155 Identities=20% Similarity=0.154 Sum_probs=112.2
Q ss_pred eEEEEcCeEEEEEeccCcCCCCccccccccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhC-CCeEEEe
Q 046623 4 REIEIAGNSIIIQELDNVCDSVTGRPLTGAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLG-ATRVVLT 82 (218)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~ 82 (218)
..+.+.+..+++...+++|.....+ ..+..+.+++ +..++.+|||+|||+|.+++.+++.+ ..+|+++
T Consensus 184 ~~~~~~~~~~~~~~~pg~Fs~~~~d--------~~~~~ll~~l---~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gv 252 (375)
T 4dcm_A 184 VSWKLEGTDWTIHNHANVFSRTGLD--------IGARFFMQHL---PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFV 252 (375)
T ss_dssp EEEEETTTTEEEEECTTCTTCSSCC--------HHHHHHHHTC---CCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEE
T ss_pred eEEEecCCceEEEeCCCcccCCccc--------HHHHHHHHhC---cccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEE
Confidence 4667788888999999988864333 3333443333 23455899999999999999998775 4699999
Q ss_pred cCcc-hHHHHHHHHHHhCCCC--ceEEEEeecCCCCccccccCCCCcEEEEcccccCC-----cchHHHHHHHHHHhcCC
Q 046623 83 DVKP-LLPGLINNVEANGLGG--RVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP-----EEMVGLGKTLKRVCGTG 154 (218)
Q Consensus 83 D~~~-~~~~a~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~-----~~~~~~l~~~~~lL~~g 154 (218)
|+++ +++.+++|++.+++.+ ++++...|+.+.. +.++||+|++++|++.. ....++++.+.++|+||
T Consensus 253 D~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~-----~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 253 DESPMAVASSRLNVETNMPEALDRCEFMINNALSGV-----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp ESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC-----CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE
T ss_pred ECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC-----CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC
Confidence 9999 9999999999988653 4777888877632 45789999999998752 23457899999999999
Q ss_pred CceEEEEEeeccCChHHHHHHH
Q 046623 155 RHTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 155 G~~~i~~~~~~~~~~~~~~~~~ 176 (218)
|.++++.. . .......+...
T Consensus 328 G~l~iv~n-~-~~~~~~~l~~~ 347 (375)
T 4dcm_A 328 GELYIVAN-R-HLDYFHKLKKI 347 (375)
T ss_dssp EEEEEEEE-T-TSCHHHHHHHH
T ss_pred cEEEEEEE-C-CcCHHHHHHHh
Confidence 95555433 2 23334445544
No 27
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.69 E-value=2.2e-15 Score=116.74 Aligned_cols=125 Identities=13% Similarity=0.113 Sum_probs=97.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|.+++.+++. ..+|+++|+++ +++.++++++.+++..+++++.+|..+... ..+.||+|+
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~----~~~~~D~v~ 127 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA----DLPLPEAVF 127 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT----TSCCCSEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc----cCCCCCEEE
Confidence 356789999999999999999887 45999999999 999999999999887679999988765322 335799999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
++... +.. +++.+.++|+|||.++ +.........+....+ ++.|+.+..+.
T Consensus 128 ~~~~~----~~~-~l~~~~~~LkpgG~lv--~~~~~~~~~~~~~~~l-~~~g~~i~~i~ 178 (204)
T 3njr_A 128 IGGGG----SQA-LYDRLWEWLAPGTRIV--ANAVTLESETLLTQLH-ARHGGQLLRID 178 (204)
T ss_dssp ECSCC----CHH-HHHHHHHHSCTTCEEE--EEECSHHHHHHHHHHH-HHHCSEEEEEE
T ss_pred ECCcc----cHH-HHHHHHHhcCCCcEEE--EEecCcccHHHHHHHH-HhCCCcEEEEE
Confidence 87643 455 9999999999999433 3333334455555555 88889888873
No 28
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.68 E-value=2.2e-16 Score=126.14 Aligned_cols=148 Identities=20% Similarity=0.122 Sum_probs=106.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.++.. +..+|+++|+++ +++.+++|++.+++.+ ++++.+|+.+.... ....++||+|+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~-~~~~~~fD~I~ 156 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLARE-AGHREAYARAV 156 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTS-TTTTTCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcc-cccCCCceEEE
Confidence 46789999999999999999865 456999999999 9999999999998865 99999887654320 00247899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEccCCCCCCCceeEEEecC
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQLGGGCPEAFAVYELIP 206 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~~~l~~~~~ 206 (218)
++.+ .+...+++.+.++|+|||.++++..........+....+ ...||.+..+.....++....+.+..+.+
T Consensus 157 s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l-~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 157 ARAV----APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPAL-ERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp EESS----CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHH-HHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred ECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHH-HHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 9654 567899999999999999555444322222233333444 78899998873334445444555554443
No 29
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.68 E-value=2.1e-16 Score=121.36 Aligned_cols=150 Identities=16% Similarity=0.087 Sum_probs=106.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..+++. +..+++++|+++ +++.++++++.+++..+++++.+|+.+... ...++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK---YIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG---TCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh---hccCCceEE
Confidence 46789999999999999998765 345999999999 999999999998876679999988755431 134789999
Q ss_pred EEcccccCC---------cchHHHHHHHHHHhcCCCceEEEEEeeccCC--hHHHHHHHH---HhCCcEEEEEEccCCCC
Q 046623 129 IMSDVFYDP---------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTR--TGDCLHELI---MSQGFRVIELTCQLGGG 194 (218)
Q Consensus 129 v~~~~~~~~---------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~--~~~~~~~~~---~~~gf~~~~~~~~~~~~ 194 (218)
+++.++... .+...+++.+.++|+|||.+++......... ..+.+...+ ...+|.+.......+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~ 177 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQAN 177 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCS
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCcc
Confidence 998766221 2346799999999999995544433221111 112222222 45678888887777766
Q ss_pred CCCceeEEEe
Q 046623 195 CPEAFAVYEL 204 (218)
Q Consensus 195 ~~~~~~l~~~ 204 (218)
.+....+.+-
T Consensus 178 ~pp~~~~~~~ 187 (197)
T 3eey_A 178 CPPILVCIEK 187 (197)
T ss_dssp CCCEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 6666665543
No 30
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=2.7e-15 Score=122.76 Aligned_cols=109 Identities=13% Similarity=0.061 Sum_probs=90.9
Q ss_pred HhcCCCCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCC
Q 046623 46 ISTHFDFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELG 123 (218)
Q Consensus 46 l~~~~~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 123 (218)
+......++.+|||+|||+|.++..+++. + .+|+++|+++ +++.++++....++..++++..+|+.+. .+
T Consensus 65 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------~~ 136 (302)
T 3hem_A 65 LDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------DE 136 (302)
T ss_dssp HHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------CC
T ss_pred HHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-------CC
Confidence 33333457789999999999999999876 7 5999999999 9999999999988877899999887543 47
Q ss_pred CCcEEEEcccccCCcc---------hHHHHHHHHHHhcCCCceEEEEE
Q 046623 124 EFDMVIMSDVFYDPEE---------MVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~---------~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
+||+|+++.++++..+ ...+++.+.++|+|||.+++...
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 8999999999988744 47999999999999995555443
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.68 E-value=1.5e-15 Score=118.26 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCC----ceEEEEeecCCCCccccccCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGG----RVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
.++.+|||+|||+|.++..+++.+. .+++++|+++ +++.+++++..+++.. +++++.+|+..... ..++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~f 103 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK----RFHGY 103 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG----GGCSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc----cCCCc
Confidence 4677999999999999999987653 5999999999 9999999988776653 69999998754433 45789
Q ss_pred cEEEEcccccCCcch--HHHHHHHHHHhcCCC
Q 046623 126 DMVIMSDVFYDPEEM--VGLGKTLKRVCGTGR 155 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~--~~~l~~~~~lL~~gG 155 (218)
|+|+++.++++..+. ..+++.+.++|+|||
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 135 (217)
T 3jwh_A 104 DAATVIEVIEHLDLSRLGAFERVLFEFAQPKI 135 (217)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSE
T ss_pred CEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCE
Confidence 999999999987644 899999999999999
No 32
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.68 E-value=6.7e-16 Score=122.83 Aligned_cols=136 Identities=14% Similarity=0.082 Sum_probs=102.8
Q ss_pred HHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCC
Q 046623 45 FISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELG 123 (218)
Q Consensus 45 ~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 123 (218)
++......++.+|||+|||+|.++..+++.+..+++++|+++ +++.++++.... .++.++.+|+..... +.+
T Consensus 85 ~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~----~~~ 157 (254)
T 1xtp_A 85 FIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL----PPN 157 (254)
T ss_dssp HHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC----CSS
T ss_pred HHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC----CCC
Confidence 333333456789999999999999998876666899999999 999999887554 458888888766543 557
Q ss_pred CCcEEEEcccccCC--cchHHHHHHHHHHhcCCCceEEEEEeec------------cCChHHHHHHHHHhCCcEEEEE
Q 046623 124 EFDMVIMSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEV------------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~------------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+||+|++..++++. .+...+++.+.++|+|||.+++...... .....+.+..++.+.||.+..+
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 89999999999887 5689999999999999994444332110 0113355566669999999887
No 33
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=2.1e-15 Score=114.72 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=102.7
Q ss_pred EEcCeEEEEEeccCcCCCCccccccccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc
Q 046623 7 EIAGNSIIIQELDNVCDSVTGRPLTGAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP 86 (218)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~ 86 (218)
.+.+..+......++|.+...+ .....+.+.+ ...++.+|||+|||+|.++..+++. ..+++++|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~---~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~ 84 (194)
T 1dus_A 17 ILRGKKLKFKTDSGVFSYGKVD--------KGTKILVENV---VVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINR 84 (194)
T ss_dssp EETTEEEEEEEETTSTTTTSCC--------HHHHHHHHHC---CCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCH
T ss_pred ecCCCceEEEeCCCcCCccccc--------hHHHHHHHHc---ccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCH
Confidence 4556667776666677654211 2223333333 2246789999999999999999877 45999999999
Q ss_pred -hHHHHHHHHHHhCCCC-ceEEEEeecCCCCccccccCCCCcEEEEcccccC-CcchHHHHHHHHHHhcCCCceEEE
Q 046623 87 -LLPGLINNVEANGLGG-RVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYD-PEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 87 -~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~-~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+++.+++++..++..+ ++++..+|+.+.. +.++||+|+++.++++ ......+++.+.++|+|||.+++.
T Consensus 85 ~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 85 RAIKLAKENIKLNNLDNYDIRVVHSDLYENV-----KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp HHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-----TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCccceEEEECchhccc-----ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999999999887754 4899998876632 3568999999888776 356789999999999999944433
No 34
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.67 E-value=3.1e-15 Score=121.36 Aligned_cols=105 Identities=13% Similarity=0.058 Sum_probs=88.7
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
....++.+|||+|||+|.++..++ ..+. +|+++|+++ +++.+++++...+...++.+..+|+.+. + ++||
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~-~~fD 131 (287)
T 1kpg_A 60 LGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF------D-EPVD 131 (287)
T ss_dssp TTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC------C-CCCS
T ss_pred cCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC------C-CCee
Confidence 334567899999999999999987 5665 999999999 9999999998888777799998887432 3 7899
Q ss_pred EEEEcccccCC--cchHHHHHHHHHHhcCCCceEEEE
Q 046623 127 MVIMSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 127 ~Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
+|++..++++. .+...+++.+.++|+|||.+++..
T Consensus 132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999887 678999999999999999555543
No 35
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=8.5e-16 Score=118.39 Aligned_cols=137 Identities=12% Similarity=0.060 Sum_probs=104.1
Q ss_pred HHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 41 ILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 41 ~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
.+..++.. .+.+|||+|||+|.++..++..+. +++++|+++ +++.++++. .++.++.+|+.+...
T Consensus 33 ~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~--- 98 (203)
T 3h2b_A 33 LIEPWATG----VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH------PSVTFHHGTITDLSD--- 98 (203)
T ss_dssp HHHHHHHH----CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGG---
T ss_pred HHHHHhcc----CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC------CCCeEEeCccccccc---
Confidence 45555543 277999999999999999988866 899999999 999988772 358899888766443
Q ss_pred ccCCCCcEEEEcccccCCc--chHHHHHHHHHHhcCCCceEEEEEeecc------------CChHHHHHHHHHhCCcEEE
Q 046623 120 SELGEFDMVIMSDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEVR------------TRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~~------------~~~~~~~~~~~~~~gf~~~ 185 (218)
+.++||+|+++.++++.. +...+++.+.++|+|||.+++....... ....+.+..++.+.||.+.
T Consensus 99 -~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 177 (203)
T 3h2b_A 99 -SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVT 177 (203)
T ss_dssp -SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEE
T ss_pred -CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEE
Confidence 568899999999998864 8999999999999999944444322211 1234556666699999999
Q ss_pred EEEccCC
Q 046623 186 ELTCQLG 192 (218)
Q Consensus 186 ~~~~~~~ 192 (218)
.+.....
T Consensus 178 ~~~~~~~ 184 (203)
T 3h2b_A 178 SSHWDPR 184 (203)
T ss_dssp EEEECTT
T ss_pred EEEecCC
Confidence 9844433
No 36
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.67 E-value=9.2e-16 Score=121.48 Aligned_cols=130 Identities=15% Similarity=0.073 Sum_probs=99.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|..+..+++.+..+++++|+++ +++.+++++...+ ..++.++.+|+..... ..++||+|+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~----~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTP----EPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCC----CSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCC----CCCCEEEEEEc
Confidence 5789999999999999998776666999999999 9999999887653 2357888888765543 45689999999
Q ss_pred ccccCCcc--hHHHHHHHHHHhcCCCceEEEEEeec-----------cCChHHHHHHHHHhCCcEEEEE
Q 046623 132 DVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSEV-----------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 132 ~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~-----------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.++++..+ ...+++.+.++|+|||.+++...... .....+.+..++.+.||.+..+
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 99988766 45899999999999994444322110 0113445555569999999887
No 37
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.66 E-value=4.4e-16 Score=123.08 Aligned_cols=125 Identities=14% Similarity=0.108 Sum_probs=99.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++... +++++.+|+.+. . +.++||+|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~----~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-Q----LPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-C----CSSCEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-C----cCCcccEEEE
Confidence 4677999999999999999988776 899999999 99998887533 488998887654 2 5678999999
Q ss_pred cccccCCcchHHHHHHHH-HHhcCCCceEEEEEeec-----------------------------cCChHHHHHHHHHhC
Q 046623 131 SDVFYDPEEMVGLGKTLK-RVCGTGRHTVVWAVSEV-----------------------------RTRTGDCLHELIMSQ 180 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~-~lL~~gG~~~i~~~~~~-----------------------------~~~~~~~~~~~~~~~ 180 (218)
..++++..+...+++++. ++|+|||.+++...... +....+.+..++++.
T Consensus 110 ~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 189 (250)
T 2p7i_A 110 THVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRA 189 (250)
T ss_dssp ESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHT
T ss_pred hhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHC
Confidence 999999999999999999 99999995554432211 112344556666999
Q ss_pred CcEEEEE
Q 046623 181 GFRVIEL 187 (218)
Q Consensus 181 gf~~~~~ 187 (218)
||.+..+
T Consensus 190 Gf~~~~~ 196 (250)
T 2p7i_A 190 GLQVTYR 196 (250)
T ss_dssp TCEEEEE
T ss_pred CCeEEEE
Confidence 9999887
No 38
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.66 E-value=1.6e-15 Score=123.01 Aligned_cols=125 Identities=17% Similarity=0.185 Sum_probs=100.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.+++.+++.++.+|+++|+++ +++.+++|++.+++.++++++.+|..+.. ..++||+|+++
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~-----~~~~fD~Vi~~ 199 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----GENIADRILMG 199 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----CCSCEEEEEEC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc-----ccCCccEEEEC
Confidence 5789999999999999999988776799999999 99999999999998877999999887654 35689999997
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEEEEeec----cCChHHHHHHHHHhCCcEEEEE
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV----RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~----~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
++. ....+++.+.++|+|||.+++..+... .....+ +...+.+.||.+..+
T Consensus 200 ~p~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 200 YVV----RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFET-FKRITKEYGYDVEKL 254 (278)
T ss_dssp CCS----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHH-HHHHHHHTTCEEEEE
T ss_pred Cch----hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHH-HHHHHHHcCCeeEEe
Confidence 663 347889999999999996555555432 223344 444448899988774
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.66 E-value=1.9e-15 Score=121.83 Aligned_cols=118 Identities=24% Similarity=0.234 Sum_probs=96.0
Q ss_pred hHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 38 SALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 38 ~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
....+..++.... ..++.+|||+|||+|.++..+++.+ ..+++++|+++ +++.+++++...+.. ++.+...|+...
T Consensus 21 ~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~ 99 (276)
T 3mgg_A 21 QAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSL 99 (276)
T ss_dssp --CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGC
T ss_pred HHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccC
Confidence 3345566665532 3567899999999999999998764 45999999999 999999999888775 489999888765
Q ss_pred CccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.. +.++||+|+++.++++..+...+++.+.++|+|||.+++.
T Consensus 100 ~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 100 PF----EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp CS----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC----CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 43 5678999999999999999999999999999999944443
No 40
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.66 E-value=9.1e-16 Score=118.53 Aligned_cols=153 Identities=14% Similarity=0.175 Sum_probs=112.0
Q ss_pred chhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 36 WDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 36 w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
++....+.+++... ..++.+|||+|||+|.++..+++.+..+++++|+++ +++.+++++..++..+ +++..+|+.+.
T Consensus 44 ~~~~~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~ 121 (205)
T 3grz_A 44 HQTTQLAMLGIERA-MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHHHHHH-CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTT
T ss_pred CccHHHHHHHHHHh-ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEecccccc
Confidence 45555566666542 236789999999999999999888777999999999 9999999999988766 89999888653
Q ss_pred CccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEccCCCC
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQLGGG 194 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~~~~ 194 (218)
..++||+|+++.++++ ...+++.+.++|+|||.+++ .........+ +...+.+.||.+..+...
T Consensus 122 ------~~~~fD~i~~~~~~~~---~~~~l~~~~~~L~~gG~l~~--~~~~~~~~~~-~~~~~~~~Gf~~~~~~~~---- 185 (205)
T 3grz_A 122 ------VDGKFDLIVANILAEI---LLDLIPQLDSHLNEDGQVIF--SGIDYLQLPK-IEQALAENSFQIDLKMRA---- 185 (205)
T ss_dssp ------CCSCEEEEEEESCHHH---HHHHGGGSGGGEEEEEEEEE--EEEEGGGHHH-HHHHHHHTTEEEEEEEEE----
T ss_pred ------CCCCceEEEECCcHHH---HHHHHHHHHHhcCCCCEEEE--EecCcccHHH-HHHHHHHcCCceEEeecc----
Confidence 3478999999877653 57888999999999993333 3222333444 444448999998876332
Q ss_pred CCCceeEEEecCC
Q 046623 195 CPEAFAVYELIPP 207 (218)
Q Consensus 195 ~~~~~~l~~~~~~ 207 (218)
.....+..-.++
T Consensus 186 -~~w~~~~~~~~~ 197 (205)
T 3grz_A 186 -GRWIGLAISRKH 197 (205)
T ss_dssp -TTEEEEEEEECC
T ss_pred -CCEEEEEEeccc
Confidence 234455554444
No 41
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.66 E-value=9.2e-17 Score=124.24 Aligned_cols=104 Identities=17% Similarity=0.086 Sum_probs=82.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC-CceEEEEeecCCCCccccccCCC-CcEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG-GRVEVRELVWGSDDLSQLSELGE-FDMVI 129 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~-~D~Iv 129 (218)
++.+|||+|||+|.+++.++..+..+|+++|+++ +++.+++|++.+++. .+++++.+|+.+.... ...++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ--PQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS--CCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh--hccCCCCCEEE
Confidence 5779999999999999987777767999999999 999999999998874 4689998876543210 02467 99999
Q ss_pred EcccccCCcchHHHHHHH--HHHhcCCCceEE
Q 046623 130 MSDVFYDPEEMVGLGKTL--KRVCGTGRHTVV 159 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~--~~lL~~gG~~~i 159 (218)
++++++ ......+++.+ .++|+|||.+++
T Consensus 131 ~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i 161 (201)
T 2ift_A 131 LDPPFH-FNLAEQAISLLCENNWLKPNALIYV 161 (201)
T ss_dssp ECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ECCCCC-CccHHHHHHHHHhcCccCCCcEEEE
Confidence 988854 56778888888 457999994333
No 42
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.66 E-value=5.3e-16 Score=123.04 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=94.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||+|||+|.+++.++.. +..+|+++|+++ +++.++++++.+++.+ ++++.+|+.+.... ....++||+|++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~-~~~~~~fD~V~~ 147 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQR-KDVRESYDIVTA 147 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTC-TTTTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhccc-ccccCCccEEEE
Confidence 5779999999999999998754 345999999999 9999999999988764 89998877543210 001468999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
... .+...+++.+.++|+|||.++++..........+.... +...||.+..+.
T Consensus 148 ~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~-l~~~g~~~~~~~ 200 (240)
T 1xdz_A 148 RAV----ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKA-ITTLGGELENIH 200 (240)
T ss_dssp ECC----SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHH-HHHTTEEEEEEE
T ss_pred ecc----CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHH-HHHcCCeEeEEE
Confidence 663 67899999999999999954443221111122233333 488999988773
No 43
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.65 E-value=1.8e-15 Score=122.30 Aligned_cols=127 Identities=16% Similarity=0.168 Sum_probs=101.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.+++.+++.|+.+|+++|+|+ +++.+++|++.|++.++++++.+|..+.. ..+.||.|++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-----~~~~~D~Vi~ 198 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----GENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----CCSCEEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-----cccCCCEEEE
Confidence 46889999999999999999999888999999999 99999999999999999999998876543 4578999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc---CChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR---TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~---~~~~~~~~~~~~~~gf~~~~~ 187 (218)
++|... ..++..+.++|++||.+.++...... ....+.+.....+.|+.+..+
T Consensus 199 ~~p~~~----~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 199 GYVVRT----HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp CCCSSG----GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred CCCCcH----HHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEE
Confidence 877543 57888889999999944444333321 234455666657889887655
No 44
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.65 E-value=1.6e-15 Score=121.48 Aligned_cols=138 Identities=21% Similarity=0.336 Sum_probs=103.6
Q ss_pred cchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 35 LWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 35 ~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
.++.+....+++... ..++.+|||+|||+|.+++.+++.++ +|+++|+++ +++.+++|+..+++. +++..+|+.+
T Consensus 103 ~~~tt~~~~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~ 178 (254)
T 2nxc_A 103 HHETTRLALKALARH-LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEA 178 (254)
T ss_dssp CSHHHHHHHHHHHHH-CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHH
T ss_pred CCHHHHHHHHHHHHh-cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhh
Confidence 345555566666543 24678999999999999999998887 999999999 999999999998875 7888777654
Q ss_pred CCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
. . +.++||+|+++.+.+ ....++..+.++|+|||. +++.........+....+ .+.||.+..+
T Consensus 179 ~-~----~~~~fD~Vv~n~~~~---~~~~~l~~~~~~LkpgG~--lils~~~~~~~~~v~~~l-~~~Gf~~~~~ 241 (254)
T 2nxc_A 179 A-L----PFGPFDLLVANLYAE---LHAALAPRYREALVPGGR--ALLTGILKDRAPLVREAM-AGAGFRPLEE 241 (254)
T ss_dssp H-G----GGCCEEEEEEECCHH---HHHHHHHHHHHHEEEEEE--EEEEEEEGGGHHHHHHHH-HHTTCEEEEE
T ss_pred c-C----cCCCCCEEEECCcHH---HHHHHHHHHHHHcCCCCE--EEEEeeccCCHHHHHHHH-HHCCCEEEEE
Confidence 2 1 356899999976543 357899999999999993 333333334444444444 8999998876
No 45
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.65 E-value=8.2e-15 Score=114.13 Aligned_cols=128 Identities=13% Similarity=0.059 Sum_probs=98.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++.. .++.+..+|+.+... + ++||+|++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~----~-~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEV----P-TSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCC----C-SCCSEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCC----C-CCeEEEEE
Confidence 3678999999999999999988765 999999999 9999888754 348888888876543 3 88999999
Q ss_pred cccccCCcchHH--HHHHHHHHhcCCCceEEEEEeecc---------------------------CChHHHHHHHHHhCC
Q 046623 131 SDVFYDPEEMVG--LGKTLKRVCGTGRHTVVWAVSEVR---------------------------TRTGDCLHELIMSQG 181 (218)
Q Consensus 131 ~~~~~~~~~~~~--~l~~~~~lL~~gG~~~i~~~~~~~---------------------------~~~~~~~~~~~~~~g 181 (218)
+.++++..+... +++.+.++|+|||.+++....... ....+.+..++++.|
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 192 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNG 192 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTT
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCC
Confidence 999998887766 999999999999944433211100 012345566669999
Q ss_pred cEEEEEEcc
Q 046623 182 FRVIELTCQ 190 (218)
Q Consensus 182 f~~~~~~~~ 190 (218)
|.+..+...
T Consensus 193 f~v~~~~~~ 201 (220)
T 3hnr_A 193 FHVTFTRLN 201 (220)
T ss_dssp EEEEEEECS
T ss_pred CEEEEeecc
Confidence 998887544
No 46
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.64 E-value=2.9e-15 Score=120.45 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC---CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG---ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~---~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
.++.+|||+|||+|..++.+++.. ..+|+++|+|+ +++.|+++++..+...+++++.+|+.+.. .+.||+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~------~~~~d~ 142 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA------IENASM 142 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC------CCSEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc------cccccc
Confidence 468899999999999999997652 24899999999 99999999998887778999999987653 356999
Q ss_pred EEEcccccCCc--chHHHHHHHHHHhcCCCceEE
Q 046623 128 VIMSDVFYDPE--EMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 128 Iv~~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i 159 (218)
|+++.++++.. +...+++++.++|+|||.+++
T Consensus 143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEE
Confidence 99999988754 456799999999999994433
No 47
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=9.2e-15 Score=113.77 Aligned_cols=130 Identities=16% Similarity=0.118 Sum_probs=96.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||+|||+|.+++.+++.. ..+++++|+++ +++.+++++..+++ .++.++.+|+.... ...+.++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLT--DYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGG--GTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHH--hhcCCCCCCEEEE
Confidence 46799999999999999998664 45999999999 99999999998887 46999999987632 1114578999999
Q ss_pred cccccCCc--------chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 131 SDVFYDPE--------EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 131 ~~~~~~~~--------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
+.+..+.. ....+++.+.++|+||| .+++.+..........+.+ .+.||....+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG--~l~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 180 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENG--EIHFKTDNRGLFEYSLVSF-SQYGMKLNGVW 180 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTC--EEEEEESCHHHHHHHHHHH-HHHTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCc--EEEEEeCCHHHHHHHHHHH-HHCCCeeeecc
Confidence 86643221 23689999999999999 3333333223333434444 78899987774
No 48
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.64 E-value=1.1e-14 Score=109.81 Aligned_cols=132 Identities=14% Similarity=0.107 Sum_probs=99.2
Q ss_pred HHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc
Q 046623 40 LILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS 117 (218)
Q Consensus 40 ~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (218)
..+..++.. ....++.+|||+|||+|.++..+++ +..+++++|+++ +++.++++++.+++. +++++.+|+.+ ..
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~-~~- 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAED-VL- 96 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHH-HG-
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccc-cc-
Confidence 334444433 2335678999999999999999988 556999999999 999999999988873 58999888765 22
Q ss_pred ccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 118 QLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 118 ~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++||+|+++.+ .....+++.+.++ ||| .+++.........+....+ ++.||.+..+
T Consensus 97 ---~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG--~l~~~~~~~~~~~~~~~~l-~~~g~~~~~~ 154 (183)
T 2yxd_A 97 ---DKLEFNKAFIGGT----KNIEKIIEILDKK--KIN--HIVANTIVLENAAKIINEF-ESRGYNVDAV 154 (183)
T ss_dssp ---GGCCCSEEEECSC----SCHHHHHHHHHHT--TCC--EEEEEESCHHHHHHHHHHH-HHTTCEEEEE
T ss_pred ---cCCCCcEEEECCc----ccHHHHHHHHhhC--CCC--EEEEEecccccHHHHHHHH-HHcCCeEEEE
Confidence 4478999999887 6678899999988 999 3333333334455555555 8899988776
No 49
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.7e-15 Score=122.56 Aligned_cols=119 Identities=12% Similarity=0.125 Sum_probs=93.6
Q ss_pred HHHHHhcCCCCCCCeEEEECCCCCHHHHHHHH--hCCCeEEEecCcc-hHHHHHHHHHHh-CCCCceEEEEeecCCCCcc
Q 046623 42 LAQFISTHFDFQNKSVLELGAGAGLPGLTAAR--LGATRVVLTDVKP-LLPGLINNVEAN-GLGGRVEVRELVWGSDDLS 117 (218)
Q Consensus 42 l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~--~~~~~v~~~D~~~-~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~ 117 (218)
+.+.+......++.+|||+|||+|..+..+++ .+..+|+++|+++ +++.+++++... +...+++++.+|+.+....
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~ 104 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL 104 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc
Confidence 44444443334678999999999999999985 2456999999999 999999999886 4446799999998876541
Q ss_pred c--cccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 118 Q--LSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 118 ~--~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
. ....++||+|+++.++++. +...+++.+.++|+|||.++++.
T Consensus 105 ~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 105 GADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp CTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 0012789999999999998 99999999999999999665543
No 50
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.63 E-value=4.3e-15 Score=125.66 Aligned_cols=136 Identities=23% Similarity=0.211 Sum_probs=101.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHh-----C-C-CCceEEEEeecCCCCccc--c
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEAN-----G-L-GGRVEVRELVWGSDDLSQ--L 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~-----~-~-~~~~~~~~~d~~~~~~~~--~ 119 (218)
.++.+|||+|||+|..+..+++. +..+|+++|+++ +++.++++++.+ + . ..++.++.+|+.+..... .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999998764 345999999999 999999998765 3 2 246999999987652100 1
Q ss_pred ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC-------------------ChHHHHHHHHHhC
Q 046623 120 SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT-------------------RTGDCLHELIMSQ 180 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~-------------------~~~~~~~~~~~~~ 180 (218)
.+.++||+|+++.++++..+...+++.+.++|||||.+++........ ...+.+..++.+.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 156789999999999999999999999999999999544432222111 1224455566999
Q ss_pred CcEEEEE
Q 046623 181 GFRVIEL 187 (218)
Q Consensus 181 gf~~~~~ 187 (218)
||...++
T Consensus 242 GF~~v~~ 248 (383)
T 4fsd_A 242 GFRDVRL 248 (383)
T ss_dssp TCCCEEE
T ss_pred CCceEEE
Confidence 9986544
No 51
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=8.9e-15 Score=110.07 Aligned_cols=127 Identities=11% Similarity=0.034 Sum_probs=94.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++++..++...++ ++..|..+... ...++||+|+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~---~~~~~~D~i~ 99 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD---DVPDNPDVIF 99 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG---GCCSCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh---ccCCCCCEEE
Confidence 56779999999999999998866 346999999999 999999999998887567 77766543221 0127899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEc
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTC 189 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~ 189 (218)
++.++++ ..+++.+.++|+|||.+ ++..............+ ...++.+..+..
T Consensus 100 ~~~~~~~----~~~l~~~~~~L~~gG~l--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 152 (178)
T 3hm2_A 100 IGGGLTA----PGVFAAAWKRLPVGGRL--VANAVTVESEQMLWALR-KQFGGTISSFAI 152 (178)
T ss_dssp ECC-TTC----TTHHHHHHHTCCTTCEE--EEEECSHHHHHHHHHHH-HHHCCEEEEEEE
T ss_pred ECCcccH----HHHHHHHHHhcCCCCEE--EEEeeccccHHHHHHHH-HHcCCeeEEEEe
Confidence 9888766 78999999999999933 33333233344444444 788888877633
No 52
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.63 E-value=1.6e-15 Score=127.52 Aligned_cols=100 Identities=22% Similarity=0.280 Sum_probs=87.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE-
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM- 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~- 130 (218)
+++++|||||||+|.+++.+++.|+++|+++|.+++++.|+++++.|++.++++++.+|.++... .+++|+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-----pe~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVEL-----PEQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCC-----SSCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecC-----CccccEEEee
Confidence 67899999999999999999999999999999988778899999999999999999999877653 468999997
Q ss_pred --cccccCCcchHHHHHHHHHHhcCCCc
Q 046623 131 --SDVFYDPEEMVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 131 --~~~~~~~~~~~~~l~~~~~lL~~gG~ 156 (218)
...+.+...+..++....++|+|||.
T Consensus 157 ~~~~~l~~e~~l~~~l~a~~r~Lkp~G~ 184 (376)
T 4hc4_A 157 WMGYGLLHESMLSSVLHARTKWLKEGGL 184 (376)
T ss_dssp CCBTTBTTTCSHHHHHHHHHHHEEEEEE
T ss_pred cccccccccchhhhHHHHHHhhCCCCce
Confidence 34445567889999999999999993
No 53
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.63 E-value=7.1e-15 Score=116.04 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=84.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++....+. ++.+..+|+.+... + ++||+|++
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~----~-~~fD~v~~ 107 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI----N-RKFDLITC 107 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC----S-CCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc----c-CCceEEEE
Confidence 3678999999999999999988765 899999999 99999999887764 48888888765432 3 78999999
Q ss_pred cc-cccCC---cchHHHHHHHHHHhcCCCceEE
Q 046623 131 SD-VFYDP---EEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 131 ~~-~~~~~---~~~~~~l~~~~~lL~~gG~~~i 159 (218)
+. ++++. .+...+++.+.++|+|||.+++
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 87 88887 6788999999999999995554
No 54
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.63 E-value=9.8e-16 Score=122.89 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=89.7
Q ss_pred CcCCCCccccccccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh
Q 046623 20 NVCDSVTGRPLTGAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEAN 98 (218)
Q Consensus 20 ~~~~~~~~~~~~g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~ 98 (218)
+.|+.....|...+...+ ..+.+++.... ..+.+|||+|||+|..+..++..+. +|+++|+|+ +++.+++.
T Consensus 9 d~F~~~a~~Y~~~Rp~yp--~~l~~~l~~~~-~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~---- 80 (257)
T 4hg2_A 9 DHFTPVADAYRAFRPRYP--RALFRWLGEVA-PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH---- 80 (257)
T ss_dssp -----------CCCCCCC--HHHHHHHHHHS-SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC----
T ss_pred HHHHHHHHHHHHHCCCcH--HHHHHHHHHhc-CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc----
Confidence 344544444443332222 23445555422 2356999999999999999998875 999999999 88776532
Q ss_pred CCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEee
Q 046623 99 GLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSE 164 (218)
Q Consensus 99 ~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~ 164 (218)
.++.++.+|.++... +.++||+|++..++|+. +..+++.++.++|||||.++++....
T Consensus 81 ---~~v~~~~~~~e~~~~----~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 81 ---PRVTYAVAPAEDTGL----PPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp ---TTEEEEECCTTCCCC----CSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ---CCceeehhhhhhhcc----cCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 458999999887665 67899999999999764 68899999999999999666665543
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.63 E-value=8.9e-15 Score=120.43 Aligned_cols=105 Identities=12% Similarity=0.031 Sum_probs=88.8
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
....++.+|||+|||+|.++..+++. +. +|+++|+++ +++.++++....++.+++.+..+|+.+. + ++||
T Consensus 86 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~-~~fD 157 (318)
T 2fk8_A 86 LDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF------A-EPVD 157 (318)
T ss_dssp SCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC------C-CCCS
T ss_pred cCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC------C-CCcC
Confidence 33457789999999999999998865 65 999999999 9999999999888777789998886442 2 6899
Q ss_pred EEEEcccccCC--cchHHHHHHHHHHhcCCCceEEEE
Q 046623 127 MVIMSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 127 ~Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
+|++..++++. ++...+++.+.++|+|||.+++..
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999999887 688999999999999999555443
No 56
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.62 E-value=4.7e-15 Score=114.93 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=100.0
Q ss_pred HHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc
Q 046623 40 LILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 40 ~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (218)
..+..++... .++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++. ++.+..+|+....
T Consensus 32 ~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--- 98 (211)
T 3e23_A 32 ATLTKFLGEL--PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--- 98 (211)
T ss_dssp HHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC---
T ss_pred HHHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC---
Confidence 3444554432 3577999999999999999988765 999999999 999998886 2556666665433
Q ss_pred cccCCCCcEEEEcccccCCc--chHHHHHHHHHHhcCCCceEEEEEeecc-----------CChHHHHHHHHHhCC-cEE
Q 046623 119 LSELGEFDMVIMSDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEVR-----------TRTGDCLHELIMSQG-FRV 184 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~~-----------~~~~~~~~~~~~~~g-f~~ 184 (218)
..++||+|+++.++++.. +...+++.+.++|+|||.+++....... ....+.+..++++.| |.+
T Consensus 99 --~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 99 --AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp --CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred --CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEE
Confidence 467899999999998876 7889999999999999944444322211 124455666669999 999
Q ss_pred EEE
Q 046623 185 IEL 187 (218)
Q Consensus 185 ~~~ 187 (218)
..+
T Consensus 177 ~~~ 179 (211)
T 3e23_A 177 VAV 179 (211)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 57
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=5.7e-15 Score=116.57 Aligned_cols=126 Identities=19% Similarity=0.221 Sum_probs=100.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++. ...+++++.+|+.+... +.++||+|++.
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~----~~~~fD~v~~~ 123 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPF----ENEQFEAIMAI 123 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSS----CTTCEEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCC----CCCCccEEEEc
Confidence 677999999999999999988866 999999999 999988774 22458999999876543 56899999999
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc------------------CChHHHHHHHHHhCCcEEEEE
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR------------------TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~------------------~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.++++..+...+++.+.++|+|||.+++....... ....+.+..++.+.||.+...
T Consensus 124 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 124 NSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred ChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 99999999999999999999999944444322210 123345666669999999887
No 58
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.62 E-value=4.6e-15 Score=115.62 Aligned_cols=129 Identities=19% Similarity=0.202 Sum_probs=94.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++ ..+.+...|+.+..........+||+|++
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 122 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICA 122 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEE
Confidence 4568999999999999999988865 999999999 99998877 23566766655431111123456999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEee----------------------------ccCChHHHHHHHHHhCCc
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSE----------------------------VRTRTGDCLHELIMSQGF 182 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~----------------------------~~~~~~~~~~~~~~~~gf 182 (218)
+.+++ ..+...+++.+.++|+|||.+++..... .+....+.+..++.+.||
T Consensus 123 ~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 123 NFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp ESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTE
T ss_pred Cchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCC
Confidence 99998 7889999999999999999444432210 011134555555699999
Q ss_pred EEEEEEc
Q 046623 183 RVIELTC 189 (218)
Q Consensus 183 ~~~~~~~ 189 (218)
.+..+..
T Consensus 202 ~~~~~~~ 208 (227)
T 3e8s_A 202 RLVSLQE 208 (227)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9999844
No 59
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.62 E-value=8.3e-15 Score=119.67 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=82.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC--CceEEEEeecCCCCccccccCCCCcEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG--GRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
++.+|||+|||+|.++..+++.+. +|+++|+++ +++.+++++...+.. .+++++.+|+.+.. ..++||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA-----LDKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC-----CSCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC-----cCCCcCEEE
Confidence 345999999999999999988865 899999999 999999998876532 45899999987653 357899988
Q ss_pred Ec-ccccCCc--chHHHHHHHHHHhcCCCceEEE
Q 046623 130 MS-DVFYDPE--EMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 130 ~~-~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+. .++++.. +...+++.+.++|+|||.+++.
T Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 156 ISSGSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp ECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 65 4455443 4689999999999999955543
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.62 E-value=9.4e-15 Score=114.15 Aligned_cols=113 Identities=20% Similarity=0.237 Sum_probs=90.5
Q ss_pred HHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc
Q 046623 40 LILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 40 ~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (218)
..+.+.+.... .++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++...++ .+++++.+|+.+...
T Consensus 26 ~~~~~~l~~~~-~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~-- 99 (227)
T 1ve3_A 26 ETLEPLLMKYM-KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSF-- 99 (227)
T ss_dssp HHHHHHHHHSC-CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCS--
T ss_pred HHHHHHHHHhc-CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCC--
Confidence 34444444422 2477999999999999999988876 999999999 9999999998876 458999998876543
Q ss_pred cccCCCCcEEEEccc--ccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 119 LSELGEFDMVIMSDV--FYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~--~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.++||+|+++++ +++..+...+++.+.++|+|||.+++.
T Consensus 100 --~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 100 --EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp --CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4578999999998 555567889999999999999955444
No 61
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.62 E-value=2e-14 Score=108.09 Aligned_cols=147 Identities=14% Similarity=0.102 Sum_probs=101.6
Q ss_pred hhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 37 DSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 37 ~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
+.+..+.+++... ..++.+|||+|||+|.++..+++.+ +++++|+++ +++. ..+++++.+|+.+..
T Consensus 8 ~~~~~l~~~l~~~-~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~ 74 (170)
T 3q87_B 8 EDTYTLMDALERE-GLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------HRGGNLVRADLLCSI 74 (170)
T ss_dssp HHHHHHHHHHHHH-TCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------CSSSCEEECSTTTTB
T ss_pred ccHHHHHHHHHhh-cCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------ccCCeEEECChhhhc
Confidence 4555666665431 2356799999999999999998876 999999999 8876 245889999987632
Q ss_pred ccccccCCCCcEEEEcccccCCcc---------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEE
Q 046623 116 LSQLSELGEFDMVIMSDVFYDPEE---------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 116 ~~~~~~~~~~D~Iv~~~~~~~~~~---------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~ 186 (218)
+.++||+|+++++++...+ ...+++.+.+.+ |||.+++.. .......+..+.+ .+.||....
T Consensus 75 -----~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~--~~~~~~~~l~~~l-~~~gf~~~~ 145 (170)
T 3q87_B 75 -----NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV--IEANRPKEVLARL-EERGYGTRI 145 (170)
T ss_dssp -----CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE--EGGGCHHHHHHHH-HHTTCEEEE
T ss_pred -----ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE--ecCCCHHHHHHHH-HHCCCcEEE
Confidence 3478999999988875433 367788888888 999443333 3334444544444 899999887
Q ss_pred EEccCCCCCCCceeEEEecCC
Q 046623 187 LTCQLGGGCPEAFAVYELIPP 207 (218)
Q Consensus 187 ~~~~~~~~~~~~~~l~~~~~~ 207 (218)
+..... ...+...++..++
T Consensus 146 ~~~~~~--~~e~~~~~~~~~~ 164 (170)
T 3q87_B 146 LKVRKI--LGETVYIIKGEKS 164 (170)
T ss_dssp EEEEEC--SSSEEEEEEEECC
T ss_pred EEeecc--CCceEEEEEEecc
Confidence 733322 2244555555555
No 62
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.62 E-value=4.7e-15 Score=120.50 Aligned_cols=107 Identities=19% Similarity=0.094 Sum_probs=89.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+..+++++|+++ +++.++++....+...++.++.+|+.+.... ..++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD---LGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC---CSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC---CCCCcCEEEE
Confidence 46789999999999999988887766999999999 9999999998887666789999988765421 3578999999
Q ss_pred cccccC----CcchHHHHHHHHHHhcCCCceEEEE
Q 046623 131 SDVFYD----PEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 131 ~~~~~~----~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
+.++++ ..+...+++.+.++|+|||.+++..
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 888865 4667899999999999999555443
No 63
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.62 E-value=1.2e-14 Score=110.59 Aligned_cols=124 Identities=17% Similarity=0.158 Sum_probs=94.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++. .++.+...|+..... +.++||+|++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~----~~~~~D~i~~ 113 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQI----SETDFDLIVS 113 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCC----CCCCEEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCC----CCCceeEEEE
Confidence 3677999999999999999988765 999999999 999988775 237888888876543 4578999999
Q ss_pred c-ccccCC--cchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 131 S-DVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~-~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+ +++++. +....+++.+.++|+|||.+++... ..+....+.+..++.+.||.+...
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~-~~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFG-AGRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE-TTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC-CCCCcCHHHHHHHHHHcCCEEeee
Confidence 8 566654 4568899999999999994443332 323233344444448999999887
No 64
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.62 E-value=6.8e-15 Score=115.73 Aligned_cols=101 Identities=23% Similarity=0.214 Sum_probs=83.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.. ..+++++|+++ +++.+++++...+ ++.++.+|+.+... . ++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~----~-~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF----E-EKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC----C-SCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC----C-CCceEEE
Confidence 567899999999999999998763 45999999999 9999998876553 58999999877653 3 7899999
Q ss_pred EcccccCCcchH--HHHHHHHHHhcCCCceEEE
Q 046623 130 MSDVFYDPEEMV--GLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 130 ~~~~~~~~~~~~--~~l~~~~~lL~~gG~~~i~ 160 (218)
++.++++..+.. ++++.+.++|+|||.+++.
T Consensus 115 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 115 SALSIHHLEDEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeCccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999998876554 5999999999999944443
No 65
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.61 E-value=5.6e-15 Score=116.61 Aligned_cols=101 Identities=20% Similarity=0.170 Sum_probs=85.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+..+++++|+++ +++.++++... .++.+..+|+..... +.++||+|++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~----~~~~fD~v~~ 113 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHL----PQDSFDLAYS 113 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCC----CTTCEEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccC----CCCCceEEEE
Confidence 56789999999999999999887665999999999 99998877543 248888888765443 4678999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..++++..+...+++.+.++|+|||.+++.
T Consensus 114 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 114 SLALHYVEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred eccccccchHHHHHHHHHHhcCcCcEEEEE
Confidence 999999889999999999999999955543
No 66
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.61 E-value=1.2e-15 Score=115.85 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=90.5
Q ss_pred hhHHHHHHHHhc-C-CCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 37 DSALILAQFIST-H-FDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 37 ~~~~~l~~~l~~-~-~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
+....+.+.+.. . ...++.+|||+|||+|.+++.+++.+..+|+++|+++ +++.+++++..+++..+++++.+|+.+
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 444555555443 1 2246789999999999999998877767999999999 999999999998876679999988765
Q ss_pred CCccccccCCCCcEEEEcccccCCcchHHHHHHH--HHHhcCCCceE
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTL--KRVCGTGRHTV 158 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~--~~lL~~gG~~~ 158 (218)
.........++||+|+++++++ .......+..+ .++|+|||.++
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~ 151 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIV 151 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEE
Confidence 3210001257899999988854 45667777777 77899999333
No 67
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=1.3e-14 Score=117.43 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=101.6
Q ss_pred hhHHHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 37 DSALILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 37 ~~~~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
+.+..+.+.+.. .. .++.+|||+|||+|.+++.+++. +..+++++|+++ +++.+++|+..+++. +++++.+|+.+
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~ 170 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFS 170 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTG
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhh
Confidence 334445555544 22 45679999999999999999754 456999999999 999999999998875 58999888765
Q ss_pred CCccccccCCCCcEEEEcccccCC-------------------------cchHHHHHHHHHHhcCCCceEEEEEeeccCC
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDP-------------------------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTR 168 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~-------------------------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~ 168 (218)
.. +.++||+|++++|+... .....+++.+.++|+|||.+++ ... ..
T Consensus 171 ~~-----~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~--~~~--~~ 241 (276)
T 2b3t_A 171 AL-----AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL--EHG--WQ 241 (276)
T ss_dssp GG-----TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEE--ECC--SS
T ss_pred hc-----ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEE--EEC--ch
Confidence 32 35689999999887543 2357788899999999993333 222 23
Q ss_pred hHHHHHHHHHhCCcEEEEE
Q 046623 169 TGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 169 ~~~~~~~~~~~~gf~~~~~ 187 (218)
..+.+..++.+.||....+
T Consensus 242 ~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 242 QGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp CHHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHHCCCcEEEE
Confidence 3344555558889975443
No 68
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.61 E-value=3.8e-14 Score=118.58 Aligned_cols=138 Identities=16% Similarity=0.039 Sum_probs=102.2
Q ss_pred hHHHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhC--CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 38 SALILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLG--ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 38 ~~~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~--~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
....++..+.. ....++.+|||+|||+|.+++.++..+ ..+++++|+++ +++.|++|++..++. ++++..+|+.+
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~ 265 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARH 265 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhh
Confidence 33445555544 233567899999999999999998653 35899999999 999999999999987 79999998876
Q ss_pred CCccccccCCCCcEEEEcccccCCc--------chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDPE--------EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~~--------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
... +.+.||+|++++|+.... .+..+++.+.++|+|||.+++++. ..+.++.+.. .||...
T Consensus 266 ~~~----~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------~~~~~~~~~~-~g~~~~ 334 (354)
T 3tma_A 266 LPR----FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------RPALLKRALP-PGFALR 334 (354)
T ss_dssp GGG----TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------CHHHHHHHCC-TTEEEE
T ss_pred Ccc----ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------CHHHHHHHhh-cCcEEE
Confidence 543 446689999998875421 137788999999999995444432 2244555534 788876
Q ss_pred EE
Q 046623 186 EL 187 (218)
Q Consensus 186 ~~ 187 (218)
+.
T Consensus 335 ~~ 336 (354)
T 3tma_A 335 HA 336 (354)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 69
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.61 E-value=1.2e-14 Score=118.03 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=86.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.+++++...+. ++.++.+|+.+.. ..++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~-----~~~~fD~v 93 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIE-----LNDKYDIA 93 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCC-----CSSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcC-----cCCCeeEE
Confidence 56789999999999999999765 3 25999999999 99999999877653 5899999987643 34689999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+++.++++..+...+++.+.++|+|||.+++.
T Consensus 94 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 94 ICHAFLLHMTTPETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECChhhcCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 99999999999999999999999999944443
No 70
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.61 E-value=1e-14 Score=115.36 Aligned_cols=124 Identities=14% Similarity=0.049 Sum_probs=94.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++ +.++.+|..+... ..+.++||+|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~--~~~~~~fD~i~~ 107 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLK--SLPDKYLDGVMI 107 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHH--TSCTTCBSEEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhh--hcCCCCeeEEEE
Confidence 4568999999999999999988866 899999999 98887765 5666666544210 014578999999
Q ss_pred cccccCCc--chHHHHHHHHHHhcCCCceEEEEEeec---------------cCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEV---------------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~---------------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++++.. +...+++.+.++|+|||.+++...... .....+.+..++.+.||.+..+
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 99999877 559999999999999995555443321 1123355666669999998887
No 71
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.60 E-value=6.6e-15 Score=118.04 Aligned_cols=132 Identities=14% Similarity=0.042 Sum_probs=100.1
Q ss_pred HHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 42 LAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 42 l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
+.+.+.. ....++.+|||+|||+|..+..+++.+ .+|+++|+++ +++.++++. ++.++.+|+.+...
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~--- 90 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLAL--- 90 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCS---
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCC---
Confidence 3444433 233567899999999999999998865 4999999999 888765543 48999988876543
Q ss_pred ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc--------------------CChHHHHHHHHHh
Q 046623 120 SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR--------------------TRTGDCLHELIMS 179 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~--------------------~~~~~~~~~~~~~ 179 (218)
+.++||+|+++.++++..+...+++.+.++|+ ||.+++....... ....+.+. ++++
T Consensus 91 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 167 (261)
T 3ege_A 91 -PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQE 167 (261)
T ss_dssp -CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHH
T ss_pred -CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHH
Confidence 56899999999999999999999999999999 9966666544211 11233355 6689
Q ss_pred CCcEEEEE
Q 046623 180 QGFRVIEL 187 (218)
Q Consensus 180 ~gf~~~~~ 187 (218)
.||....+
T Consensus 168 aGF~~v~~ 175 (261)
T 3ege_A 168 NTKRRVEA 175 (261)
T ss_dssp HHCSEEEE
T ss_pred cCCCceeE
Confidence 99977665
No 72
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.60 E-value=5e-15 Score=121.40 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=86.6
Q ss_pred CCCCeEEEECCCCCHHHHHHH--HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAA--RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~--~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..++ ..+..+++++|+++ +++.+++++...+..++++++.+|+.+... + ++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~-~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT----R-EGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC----C-SCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc----c-CCeEEE
Confidence 467899999999999999884 44456999999999 999999999988877779999999876543 3 889999
Q ss_pred EEcccccCCcchHH---HHHHHHHHhcCCCceEE
Q 046623 129 IMSDVFYDPEEMVG---LGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 129 v~~~~~~~~~~~~~---~l~~~~~lL~~gG~~~i 159 (218)
+++.++++..+... +++.+.++|+|||.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999988766655 79999999999994433
No 73
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.60 E-value=1.3e-14 Score=120.38 Aligned_cols=133 Identities=15% Similarity=0.091 Sum_probs=96.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCC-ceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGG-RVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||+|||+|.+++.+++.++ +|+++|+++ +++.+++|++.+++.+ ++.++.+|+.+.........++||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 567999999999999999998887 999999999 9999999999998865 4899988775432110011468999999
Q ss_pred cccccCC----------cchHHHHHHHHHHhcCCCceEEEEEeeccCC---hHHHHHHHHHhCCcEEEE
Q 046623 131 SDVFYDP----------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTR---TGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 131 ~~~~~~~----------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~---~~~~~~~~~~~~gf~~~~ 186 (218)
++|.+.. .+...++..+.++|+|||.+++......... ..+.+...+.+.|+.+..
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~ 300 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVAS 300 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 8885431 2467889999999999995444444332222 223333333467887753
No 74
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=2.1e-14 Score=109.83 Aligned_cols=127 Identities=17% Similarity=0.177 Sum_probs=98.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+. +++++|+++ +++.+++++...+.. ++.+..+|+.+.. ..++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~-----~~~~~D~v~~ 103 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLT-----FDRQYDFILS 103 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCC-----CCCCEEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCC-----CCCCceEEEE
Confidence 4677999999999999999988765 999999999 999999999888764 3889988876543 2568999999
Q ss_pred cccccCCc--chHHHHHHHHHHhcCCCceEEEEEeec----------cCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEV----------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~----------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++++.. +...+++.+.++|+|||.++++..... .....+.+..++.. |.+...
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 99988765 789999999999999995444433221 11233445555343 888776
No 75
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.59 E-value=1.3e-14 Score=113.69 Aligned_cols=126 Identities=15% Similarity=0.141 Sum_probs=97.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.+++.+ ..+|+++|+++ +++.|++|++.+++.+++++..+|+..... +.++||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~----~~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE----ETDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC----GGGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc----cCcCCCEEE
Confidence 356799999999999999999876 45899999999 999999999999998889999988754322 223799988
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
....-. .....+++.....|+++| .+++.+. ........++ .+.||.+....
T Consensus 90 iaG~Gg--~~i~~Il~~~~~~L~~~~--~lVlq~~--~~~~~vr~~L-~~~Gf~i~~e~ 141 (225)
T 3kr9_A 90 IAGMGG--RLIARILEEGLGKLANVE--RLILQPN--NREDDLRIWL-QDHGFQIVAES 141 (225)
T ss_dssp EEEECH--HHHHHHHHHTGGGCTTCC--EEEEEES--SCHHHHHHHH-HHTTEEEEEEE
T ss_pred EcCCCh--HHHHHHHHHHHHHhCCCC--EEEEECC--CCHHHHHHHH-HHCCCEEEEEE
Confidence 754421 336788888888999988 3333433 3455555555 99999998864
No 76
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.59 E-value=2.6e-14 Score=109.94 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=99.7
Q ss_pred HHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 41 ILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 41 ~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
.+..++... .++ +|||+|||+|..+..+++.+. +++++|+++ +++.++++....+. ++.+..+|+.+...
T Consensus 20 ~l~~~~~~~--~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--- 90 (202)
T 2kw5_A 20 FLVSVANQI--PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDI--- 90 (202)
T ss_dssp SHHHHHHHS--CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSC---
T ss_pred HHHHHHHhC--CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCC---
Confidence 344454432 245 999999999999999988765 999999999 99999999988765 48899888876543
Q ss_pred ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeec-------------cCChHHHHHHHHHhCCcEEEE
Q 046623 120 SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV-------------RTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~-------------~~~~~~~~~~~~~~~gf~~~~ 186 (218)
+.++||+|+++....+..+...+++.+.++|+|||.+++...... .....+.+..++. ||.+..
T Consensus 91 -~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 91 -VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp -CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred -CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 457899999965433345788999999999999995544433221 1234455566534 999887
Q ss_pred E
Q 046623 187 L 187 (218)
Q Consensus 187 ~ 187 (218)
+
T Consensus 168 ~ 168 (202)
T 2kw5_A 168 A 168 (202)
T ss_dssp E
T ss_pred E
Confidence 6
No 77
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.59 E-value=1.6e-14 Score=113.37 Aligned_cols=141 Identities=12% Similarity=0.120 Sum_probs=103.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|+|+|||+|.+++.+++.+ ..+|+++|+++ +++.|++|++.+++.+++++..+|..+... +.++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~----~~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE----EADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC----GGGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc----cccccCEEE
Confidence 356799999999999999999876 35899999999 999999999999998889999988765532 334799988
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEccCCCCCCCceeEEEec
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQLGGGCPEAFAVYELI 205 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~~~~~~~~~~l~~~~ 205 (218)
+..+-. .....+++.....|+++| .+++.+. .......+++ .+.||.+.+..+-... ...+.++.+.
T Consensus 96 iaGmGg--~lI~~IL~~~~~~l~~~~--~lIlqp~--~~~~~lr~~L-~~~Gf~i~~E~lv~e~--~~~Yeii~~~ 162 (230)
T 3lec_A 96 ICGMGG--RLIADILNNDIDKLQHVK--TLVLQPN--NREDDLRKWL-AANDFEIVAEDILTEN--DKRYEILVVK 162 (230)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCC--EEEEEES--SCHHHHHHHH-HHTTEEEEEEEEEEC----CEEEEEEEE
T ss_pred EeCCch--HHHHHHHHHHHHHhCcCC--EEEEECC--CChHHHHHHH-HHCCCEEEEEEEEEEC--CEEEEEEEEE
Confidence 644422 346778888888899888 3444433 3354555555 9999999887433221 2345554443
No 78
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.59 E-value=1.2e-14 Score=116.03 Aligned_cols=102 Identities=21% Similarity=0.171 Sum_probs=86.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+. +++++|+++ +++.+++++ . +...++.+..+|+.+... +.++||+|++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~----~~~~fD~v~~ 110 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPL----PDESVHGVIV 110 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCS----CTTCEEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCC----CCCCeeEEEE
Confidence 4678999999999999999987764 999999999 999999887 2 223468999998876543 5678999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.++++..+...+++.+.++|+|||.+++.
T Consensus 111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999999889999999999999999955554
No 79
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=7.7e-16 Score=119.12 Aligned_cols=146 Identities=14% Similarity=0.087 Sum_probs=83.5
Q ss_pred hhHHHHHHHHhc-CCC-CCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecC
Q 046623 37 DSALILAQFIST-HFD-FQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWG 112 (218)
Q Consensus 37 ~~~~~l~~~l~~-~~~-~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~ 112 (218)
+.+..+.+++.. ... .++.+|||+|||+|.++..+++... .+++++|+++ +++.+++++..++. +++++.+|+.
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~ 89 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchH
Confidence 334445555444 222 5678999999999999999987743 4899999999 99999999988775 4778877776
Q ss_pred CCCccccccCCCCcEEEEcccccCCcch--------------------------HHHHHHHHHHhcCCCceEEEEEeecc
Q 046623 113 SDDLSQLSELGEFDMVIMSDVFYDPEEM--------------------------VGLGKTLKRVCGTGRHTVVWAVSEVR 166 (218)
Q Consensus 113 ~~~~~~~~~~~~~D~Iv~~~~~~~~~~~--------------------------~~~l~~~~~lL~~gG~~~i~~~~~~~ 166 (218)
+.........++||+|++++|++..... ..+++.+.++|+|||.++++.. . .
T Consensus 90 ~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-~-~ 167 (215)
T 4dzr_A 90 EWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV-G-H 167 (215)
T ss_dssp HHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC-T-T
T ss_pred hhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE-C-C
Confidence 5211000113789999999888653322 6788888999999994233322 2 2
Q ss_pred CChHHHHHHHHH--hCCcEEEEE
Q 046623 167 TRTGDCLHELIM--SQGFRVIEL 187 (218)
Q Consensus 167 ~~~~~~~~~~~~--~~gf~~~~~ 187 (218)
... +.+..++. +.||....+
T Consensus 168 ~~~-~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 168 NQA-DEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp SCH-HHHHHHTGGGGGGTEECCE
T ss_pred ccH-HHHHHHHHHhhcCCceEEE
Confidence 333 44444447 788876554
No 80
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.58 E-value=2.7e-14 Score=110.91 Aligned_cols=114 Identities=18% Similarity=0.130 Sum_probs=90.3
Q ss_pred chhHHHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 36 WDSALILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 36 w~~~~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
|-....+..++.. ....++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++.... .+++++.+|+.+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~ 108 (216)
T 3ofk_A 33 PFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQ 108 (216)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTT
T ss_pred HhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhh
Confidence 3333445555543 3345677999999999999999988765 999999999 999999887664 358999998876
Q ss_pred CCccccccCCCCcEEEEcccccCCcch---HHHHHHHHHHhcCCCceE
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDPEEM---VGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~~~~---~~~l~~~~~lL~~gG~~~ 158 (218)
.. +.++||+|+++.++++..+. ..+++.+.++|+|||.++
T Consensus 109 ~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 109 FS-----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp CC-----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CC-----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 54 46789999999999987766 567999999999999433
No 81
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.58 E-value=2.6e-14 Score=110.90 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=82.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +++++|+++ +++.+++ .+. .++.++.+|+.+. . +.++||+|++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~----~~~~~D~v~~ 113 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-T----PDRQWDAVFF 113 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-C----CSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-C----CCCceeEEEE
Confidence 4567999999999999999988865 999999999 9988877 333 3589999988765 2 6789999999
Q ss_pred cccccCCcc--hHHHHHHHHHHhcCCCceEEE
Q 046623 131 SDVFYDPEE--MVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 131 ~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.++++..+ ...+++.+.++|+|||.+++.
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 999988776 489999999999999955544
No 82
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.58 E-value=1.3e-14 Score=110.18 Aligned_cols=135 Identities=20% Similarity=0.210 Sum_probs=99.1
Q ss_pred HHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 42 LAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 42 l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
+..++.. ....++.+|||+|||+|..+..+++.+ .+++++|+++ +++.+++++..++...++.+..+|+.+. .
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~--- 95 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA-L--- 95 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-H---
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-c---
Confidence 3444333 233577899999999999999998877 6999999999 9999999999888755688888776541 1
Q ss_pred ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 120 SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
...++||+|+++.+++ ....+++.+.++|+|||.+++ .........+....+ .+.||.+..+
T Consensus 96 ~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~--~~~~~~~~~~~~~~l-~~~g~~~~~~ 157 (192)
T 1l3i_A 96 CKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIV--TAILLETKFEAMECL-RDLGFDVNIT 157 (192)
T ss_dssp TTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEE--EECBHHHHHHHHHHH-HHTTCCCEEE
T ss_pred ccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEE--EecCcchHHHHHHHH-HHCCCceEEE
Confidence 1225899999987753 468999999999999993333 333233344444444 8889866554
No 83
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.58 E-value=1.1e-14 Score=121.73 Aligned_cols=102 Identities=20% Similarity=0.238 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.++.+|||+|||+|.++..+++.|..+|+++|++++++.|+++++.+++.++++++.+|+.+... +.++||+|+++
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~Iis~ 140 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVEL----PVEKVDIIISE 140 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCC----SSSCEEEEEEC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccC----CCCceEEEEEc
Confidence 56789999999999999999988878999999999889999999999988889999999987654 56899999996
Q ss_pred ccc---cCCcchHHHHHHHHHHhcCCCce
Q 046623 132 DVF---YDPEEMVGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 132 ~~~---~~~~~~~~~l~~~~~lL~~gG~~ 157 (218)
.+. .+......++..+.++|+|||.+
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEE
Confidence 653 34578899999999999999943
No 84
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.58 E-value=4e-14 Score=116.72 Aligned_cols=132 Identities=16% Similarity=0.012 Sum_probs=98.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..++.. +..+|+++|+++ +++.+++|++.+++. ++.++.+|...... ..++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~----~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE----LNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG----GCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc----ccccCCEE
Confidence 46789999999999999999765 235899999999 999999999999875 48888887655432 34689999
Q ss_pred EEcccccCCc------c----------------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEE
Q 046623 129 IMSDVFYDPE------E----------------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 129 v~~~~~~~~~------~----------------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~ 186 (218)
+++.|+.... + ...+++.+.++|||||.+++..++......++.+..++++.+|....
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~ 271 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELLP 271 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEEC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEEec
Confidence 9987753211 1 25889999999999995544444443444455666666888887765
Q ss_pred EE
Q 046623 187 LT 188 (218)
Q Consensus 187 ~~ 188 (218)
++
T Consensus 272 ~~ 273 (315)
T 1ixk_A 272 LK 273 (315)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 85
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.58 E-value=9.7e-15 Score=119.12 Aligned_cols=106 Identities=21% Similarity=0.221 Sum_probs=81.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCC----------------------------
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLG---------------------------- 101 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~---------------------------- 101 (218)
.++.+|||+|||+|..++.+++. +..+|+++|+++ +++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46789999999999999999865 556999999999 999999987654422
Q ss_pred -----------------------------CceEEEEeecCCCCcccc-ccCCCCcEEEEcccccC------CcchHHHHH
Q 046623 102 -----------------------------GRVEVRELVWGSDDLSQL-SELGEFDMVIMSDVFYD------PEEMVGLGK 145 (218)
Q Consensus 102 -----------------------------~~~~~~~~d~~~~~~~~~-~~~~~~D~Iv~~~~~~~------~~~~~~~l~ 145 (218)
.++.+..+|+........ ...++||+|++..++++ .+....+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 469999999876541110 14578999999988733 247889999
Q ss_pred HHHHHhcCCCce
Q 046623 146 TLKRVCGTGRHT 157 (218)
Q Consensus 146 ~~~~lL~~gG~~ 157 (218)
.+.++|+|||.+
T Consensus 205 ~~~~~LkpGG~l 216 (292)
T 3g07_A 205 RIYRHLRPGGIL 216 (292)
T ss_dssp HHHHHEEEEEEE
T ss_pred HHHHHhCCCcEE
Confidence 999999999933
No 86
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.58 E-value=4.1e-15 Score=114.99 Aligned_cols=101 Identities=18% Similarity=0.076 Sum_probs=81.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.+++.+++.+..+|+++|+++ +++.+++|++.+++ .+++++.+|+.+... ...++||+|+++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~---~~~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLA---QKGTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHS---SCCCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHh---hcCCCCCEEEEC
Confidence 5789999999999999988777767999999999 99999999999887 468999887654211 034689999998
Q ss_pred ccccCCcchHHHHHHHHH--HhcCCCceE
Q 046623 132 DVFYDPEEMVGLGKTLKR--VCGTGRHTV 158 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~--lL~~gG~~~ 158 (218)
++++ ......+++.+.+ +|+|||.++
T Consensus 130 ~p~~-~~~~~~~l~~l~~~~~L~pgG~l~ 157 (202)
T 2fpo_A 130 PPFR-RGLLEETINLLEDNGWLADEALIY 157 (202)
T ss_dssp CSSS-TTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCC-CCcHHHHHHHHHhcCccCCCcEEE
Confidence 8844 5677888888876 499999433
No 87
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=2.2e-14 Score=112.22 Aligned_cols=153 Identities=18% Similarity=0.121 Sum_probs=103.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc--cccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ--LSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~D 126 (218)
.++.+|||+|||+|..++.+++. + ..+|+++|+++ +++.++++++..++.++++++.+|..+..... ....++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 35679999999999999999874 2 45999999999 99999999999998778999998864422110 00126899
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEc-cCCCCCCCceeEEEec
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTC-QLGGGCPEAFAVYELI 205 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~-~~~~~~~~~~~l~~~~ 205 (218)
+|++....++......++..+ ++|+||| ++++.........++.+.+.....|....+|. .........+.+-.+.
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG--~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGT--VLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTC--EEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCe--EEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 999976655444444566666 8999999 44444444455566666664455566666652 1222233344544444
Q ss_pred CC
Q 046623 206 PP 207 (218)
Q Consensus 206 ~~ 207 (218)
.|
T Consensus 214 g~ 215 (221)
T 3u81_A 214 GP 215 (221)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 88
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.58 E-value=2.5e-15 Score=113.36 Aligned_cols=103 Identities=20% Similarity=0.231 Sum_probs=82.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.+++.+++.+..+++++|+++ +++.++++++.+++.++++++.+|+.+... ...++||+|++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~i~~ 106 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID---CLTGRFDLVFL 106 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH---HBCSCEEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH---hhcCCCCEEEE
Confidence 56789999999999999999887767999999999 999999999998876678999887754211 13357999999
Q ss_pred cccccCCcchHHHHHHHH--HHhcCCCceE
Q 046623 131 SDVFYDPEEMVGLGKTLK--RVCGTGRHTV 158 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~--~lL~~gG~~~ 158 (218)
+++++. .....+++.+. ++|+|||.++
T Consensus 107 ~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 107 DPPYAK-ETIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp CCSSHH-HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCCc-chHHHHHHHHHhCCCcCCCcEEE
Confidence 877642 45667777777 8899999333
No 89
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.57 E-value=1.1e-13 Score=111.37 Aligned_cols=108 Identities=22% Similarity=0.205 Sum_probs=85.6
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcc-------hHHHHHHHHHHhCCCCceEEEEee-cCCCCccccc
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKP-------LLPGLINNVEANGLGGRVEVRELV-WGSDDLSQLS 120 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~-------~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~ 120 (218)
..++.+|||+|||+|.++..+++. +. .+++++|+++ +++.++++++..+...++++..+| +..... ..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~ 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLG--PI 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCG--GG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccC--CC
Confidence 357789999999999999999866 43 5999999987 689999999887776679999887 322221 11
Q ss_pred cCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 121 ELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.++||+|+++.++++..+...+++.+.++++|||.+++.
T Consensus 119 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 4578999999999999888888888888888889944443
No 90
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.57 E-value=2.1e-14 Score=116.58 Aligned_cols=127 Identities=15% Similarity=0.134 Sum_probs=91.8
Q ss_pred CCCCeEEEECCCCCHHH-HHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPG-LTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~-~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+ +.+++....+|+++|+++ +++.|+++++..++ ++++++.+|..+. +.++||+|+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l------~d~~FDvV~ 193 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI------DGLEFDVLM 193 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG------GGCCCSEEE
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC------CCCCcCEEE
Confidence 57889999999998655 555664455999999999 99999999999888 6799999887542 357899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEc
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTC 189 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~ 189 (218)
+... .++..++++.+.+.|||||++++......+.......... ...+|.....-.
T Consensus 194 ~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~-~~~gf~~~~~~~ 249 (298)
T 3fpf_A 194 VAAL---AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDD-DITGFRRAGVVL 249 (298)
T ss_dssp ECTT---CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTG-GGTTEEEEEEEC
T ss_pred ECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChh-hhhhhhheeEEC
Confidence 8544 4778899999999999999555443322222111111111 345888766633
No 91
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.57 E-value=4.9e-14 Score=109.80 Aligned_cols=129 Identities=16% Similarity=0.125 Sum_probs=92.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||+|||+|.+++.+++. +..+++++|+++ +++.+++++..+++. ++.++.+|+.... ...+.++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~--~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLT--DVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHH--HHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHH--hhcCcCCcCEEEE
Confidence 4679999999999999999866 345999999999 999999999988874 4899988876521 1124578999987
Q ss_pred cccccCCc--------chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPE--------EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~--------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.+..+.. ....+++.+.++|+||| .+++.+............+ .+.||....+
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG--~l~~~td~~~~~~~~~~~~-~~~g~~~~~~ 176 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGG--SIHFKTDNRGLFEYSLKSF-SEYGLLLTYV 176 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSC--EEEEEESCHHHHHHHHHHH-HHHTCEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCC--EEEEEeCCHHHHHHHHHHH-HHCCCccccc
Confidence 64322111 14689999999999999 3333333223333434444 7778887665
No 92
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.57 E-value=2.6e-15 Score=120.66 Aligned_cols=139 Identities=14% Similarity=0.091 Sum_probs=97.5
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC---------------------------
Q 046623 50 FDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG--------------------------- 101 (218)
Q Consensus 50 ~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~--------------------------- 101 (218)
+..++.+|||||||+|..++.++..+..+|+++|+|+ +++.++++++.+...
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 3457789999999999888877777766899999999 999999877543200
Q ss_pred -CceE-EEEeecCCCCccccccCCCCcEEEEcccccCC----cchHHHHHHHHHHhcCCCceEEEEEeec----------
Q 046623 102 -GRVE-VRELVWGSDDLSQLSELGEFDMVIMSDVFYDP----EEMVGLGKTLKRVCGTGRHTVVWAVSEV---------- 165 (218)
Q Consensus 102 -~~~~-~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~----~~~~~~l~~~~~lL~~gG~~~i~~~~~~---------- 165 (218)
..+. +..+|+.+..+......++||+|+++.++++. +++..+++++.++|||||.+++......
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 1132 77888776422100024689999999988762 5667899999999999994444421110
Q ss_pred --cCChHHHHHHHHHhCCcEEEEEE
Q 046623 166 --RTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 166 --~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
.....+.+..++.+.||.+..+.
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEEEEe
Confidence 11244555565699999998873
No 93
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.57 E-value=9.7e-14 Score=109.29 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=109.9
Q ss_pred cCcCCCCc-cccccccccchhHH-HHHHHHhc----CCCCCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcc-hHH
Q 046623 19 DNVCDSVT-GRPLTGAWLWDSAL-ILAQFIST----HFDFQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKP-LLP 89 (218)
Q Consensus 19 ~~~~~~~~-~~~~~g~~~w~~~~-~l~~~l~~----~~~~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~-~~~ 89 (218)
..||+.-. ...-..|..|+--. .|+..+.. .+..+|.+|||+|||+|.++..+++. |. .+|+++|+++ +++
T Consensus 37 ~~vyge~~~~~~~~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~ 116 (233)
T 4df3_A 37 QRVYGERIFRYNGEEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMR 116 (233)
T ss_dssp CCSSSCCEEEETTEEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHH
T ss_pred CcccCceEEEcCCceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHH
Confidence 45665531 11224678888544 45555544 33468999999999999999999864 43 6899999999 999
Q ss_pred HHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeec----
Q 046623 90 GLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV---- 165 (218)
Q Consensus 90 ~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---- 165 (218)
.++++++.. .++..+.+|....... ....+.+|+|++.. .+..+...++.++.+.|||||.+++......
T Consensus 117 ~l~~~a~~~---~ni~~V~~d~~~p~~~-~~~~~~vDvVf~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~ 190 (233)
T 4df3_A 117 DLLTVVRDR---RNIFPILGDARFPEKY-RHLVEGVDGLYADV--AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVT 190 (233)
T ss_dssp HHHHHSTTC---TTEEEEESCTTCGGGG-TTTCCCEEEEEECC--CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHH
T ss_pred HHHHhhHhh---cCeeEEEEeccCcccc-ccccceEEEEEEec--cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCC
Confidence 998887554 3578888776654321 12457899998743 2346778899999999999995555432211
Q ss_pred ---cCChHHHHHHHHHhCCcEEEEE
Q 046623 166 ---RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 166 ---~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.....+..+.+ .+.||.+.+.
T Consensus 191 ~p~~~~~~~ev~~L-~~~GF~l~e~ 214 (233)
T 4df3_A 191 TEPSEVYKREIKTL-MDGGLEIKDV 214 (233)
T ss_dssp TCCCHHHHHHHHHH-HHTTCCEEEE
T ss_pred CChHHHHHHHHHHH-HHCCCEEEEE
Confidence 11133445555 8899998776
No 94
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.57 E-value=1.1e-14 Score=109.07 Aligned_cols=121 Identities=11% Similarity=0.123 Sum_probs=93.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++ ..++.+...| ... +.++||+|++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~----~~~~~D~v~~ 81 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK------FDSVITLSDP---KEI----PDNSVDFILF 81 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH------CTTSEEESSG---GGS----CTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCC----CCCceEEEEE
Confidence 4667999999999999999988776 999999999 99998887 1458888877 211 5578999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc---------CChHHHHHHHHHhCCcEEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR---------TRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~---------~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
+.++++..+...+++.+.++|+|||.+++....... ....+.+..++. ||.+.++.
T Consensus 82 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 82 ANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp ESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred ccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 999999999999999999999999954444322211 123445555534 99988873
No 95
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.57 E-value=2.2e-14 Score=119.52 Aligned_cols=104 Identities=19% Similarity=0.254 Sum_probs=88.0
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
..++.+|||+|||+|.++..+++.|..+|+++|++++++.++++++.+++.++++++.+|+.+... +.++||+|++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~Ivs 137 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----PVEKVDVIIS 137 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----SCSCEEEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcC----CCCcEEEEEE
Confidence 357889999999999999999988777999999999888899999999887789999999876543 4578999998
Q ss_pred ccc---ccCCcchHHHHHHHHHHhcCCCceE
Q 046623 131 SDV---FYDPEEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 131 ~~~---~~~~~~~~~~l~~~~~lL~~gG~~~ 158 (218)
+.+ +.+......++..+.++|+|||.++
T Consensus 138 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 138 EWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 763 4455678889999999999999443
No 96
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.57 E-value=2e-14 Score=113.75 Aligned_cols=126 Identities=8% Similarity=-0.006 Sum_probs=96.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.+++.+. .+|+++|+++ +++.|++|++.+++.+++++..+|..+... +.++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~----~~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE----KKDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC----GGGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC----ccccccEEE
Confidence 3567999999999999999998764 5899999999 999999999999998889999988765432 334699988
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
+...-. .....+++.....|++++ .+++.+. .......+++ .+.||.+....
T Consensus 96 iagmGg--~lI~~IL~~~~~~L~~~~--~lIlq~~--~~~~~lr~~L-~~~Gf~i~~E~ 147 (244)
T 3gnl_A 96 IAGMGG--TLIRTILEEGAAKLAGVT--KLILQPN--IAAWQLREWS-EQNNWLITSEA 147 (244)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCC--EEEEEES--SCHHHHHHHH-HHHTEEEEEEE
T ss_pred EeCCch--HHHHHHHHHHHHHhCCCC--EEEEEcC--CChHHHHHHH-HHCCCEEEEEE
Confidence 644321 346778888888898877 4444443 3455555555 89999987653
No 97
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.57 E-value=6.4e-14 Score=110.49 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=81.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|..+..+++. .+++++|+++ +++.++++....+ .++.+..+|+.+.. ..++||+|++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~-----~~~~fD~v~~~ 103 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE-----LPEPVDAITIL 103 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC-----CSSCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC-----CCCCcCEEEEe
Confidence 4579999999999999998776 5999999999 9999999988766 34888888876543 23789999997
Q ss_pred c-cccCC---cchHHHHHHHHHHhcCCCceEE
Q 046623 132 D-VFYDP---EEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 132 ~-~~~~~---~~~~~~l~~~~~lL~~gG~~~i 159 (218)
. ++++. .+...+++.+.++|+|||.+++
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 104 CDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 5 77765 5678899999999999995554
No 98
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.57 E-value=1.7e-14 Score=111.42 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=92.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||+|||+|.++..++.. +..+++++|+++ +++.+++++...+..+ +++..+|+.+.. +.++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-----~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP-----SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC-----CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC-----ccCCcCEEEE
Confidence 5779999999999999999865 446999999999 9999999999888765 899998887643 3468999998
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
+.. .....+++.+.++|+|||.+++.. . ....+.+..+ .. ||.+..+.
T Consensus 139 ~~~----~~~~~~l~~~~~~L~~gG~l~~~~--~--~~~~~~~~~~-~~-g~~~~~~~ 186 (207)
T 1jsx_A 139 RAF----ASLNDMVSWCHHLPGEQGRFYALK--G--QMPEDEIALL-PE-EYQVESVV 186 (207)
T ss_dssp SCS----SSHHHHHHHHTTSEEEEEEEEEEE--S--SCCHHHHHTS-CT-TEEEEEEE
T ss_pred ecc----CCHHHHHHHHHHhcCCCcEEEEEe--C--CCchHHHHHH-hc-CCceeeee
Confidence 543 567899999999999999333332 2 2234455555 23 89887763
No 99
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.57 E-value=9.6e-15 Score=116.72 Aligned_cols=139 Identities=12% Similarity=0.075 Sum_probs=100.9
Q ss_pred CCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCC----------------------------
Q 046623 50 FDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGL---------------------------- 100 (218)
Q Consensus 50 ~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~---------------------------- 100 (218)
+..++.+|||+|||+|..+..++..+..+|+++|+++ +++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4456789999999999999988877656899999999 99999888755321
Q ss_pred CCce-EEEEeecCCCCccccccCCCCcEEEEccccc----CCcchHHHHHHHHHHhcCCCceEEEEEe------------
Q 046623 101 GGRV-EVRELVWGSDDLSQLSELGEFDMVIMSDVFY----DPEEMVGLGKTLKRVCGTGRHTVVWAVS------------ 163 (218)
Q Consensus 101 ~~~~-~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~----~~~~~~~~l~~~~~lL~~gG~~~i~~~~------------ 163 (218)
..++ .+..+|+.+.........++||+|+++.+++ +..+...+++.+.++|+|||.+++....
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 0126 8888888765421001227899999999988 5567899999999999999954443311
Q ss_pred eccCChHHHHHHHHHhCCcEEEEEE
Q 046623 164 EVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 164 ~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
..+....+.+..++.+.||.+..+.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccccCHHHHHHHHHHCCCEEEEEE
Confidence 1112234455666699999998873
No 100
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=2.8e-14 Score=115.33 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=82.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.++++. .++.+..+|+.... ..++||+|++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~-----~~~~fD~v~~ 123 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNY------PHLHFDVADARNFR-----VDKPLDAVFS 123 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCC-----CSSCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCC-----cCCCcCEEEE
Confidence 467799999999999999998854 4999999999 999988764 34788888887643 3468999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
+.++++..+...+++.+.++|+|||.+++..
T Consensus 124 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 124 NAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999998999999999999999999555443
No 101
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.56 E-value=5.9e-14 Score=112.35 Aligned_cols=95 Identities=13% Similarity=-0.035 Sum_probs=79.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++.. ++.++.+|+.+.. ..++||+|+++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~-----~~~~fD~v~~~ 117 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFS-----LGRRFSAVTCM 117 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCC-----CSCCEEEEEEC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCC-----ccCCcCEEEEc
Confidence 567999999999999999988765 899999999 9999888742 4889998887654 35789999998
Q ss_pred c-cccCC---cchHHHHHHHHHHhcCCCceEE
Q 046623 132 D-VFYDP---EEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 132 ~-~~~~~---~~~~~~l~~~~~lL~~gG~~~i 159 (218)
. ++++. ++...+++.+.++|+|||.+++
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 7 88876 4677889999999999995544
No 102
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=1.1e-14 Score=112.48 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=83.6
Q ss_pred CCCCeEEEECCCCCHHHHH-HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLT-AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~-l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+.. ++..+ .+++++|+++ +++.++++....+ .++.+..+|+.+... +.++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~----~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPF----KDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCS----CTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCC----CCCceeEEE
Confidence 4567999999999987544 44544 4999999999 9999999988776 348888888876543 467899999
Q ss_pred EcccccCC--cchHHHHHHHHHHhcCCCceEEEE
Q 046623 130 MSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 130 ~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
++.++++. .+...+++.+.++|+|||.+++..
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99888887 778999999999999999555443
No 103
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.56 E-value=2.4e-14 Score=114.45 Aligned_cols=142 Identities=13% Similarity=0.035 Sum_probs=98.8
Q ss_pred HHHHHHhcC-CCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHH----------hC------CCC
Q 046623 41 ILAQFISTH-FDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEA----------NG------LGG 102 (218)
Q Consensus 41 ~l~~~l~~~-~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~----------~~------~~~ 102 (218)
.+.+++... ...++.+|||+|||+|..+..+++.|. +|+++|+|+ +++.+++.... .+ ...
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 455555431 113677999999999999999998877 999999999 99998765421 00 124
Q ss_pred ceEEEEeecCCCCccccccCCCCcEEEEcccccCC--cchHHHHHHHHHHhcCCCceEEEEEeec--------cCChHHH
Q 046623 103 RVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEV--------RTRTGDC 172 (218)
Q Consensus 103 ~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~--------~~~~~~~ 172 (218)
+++++.+|+.+.... ..++||+|++..++++. ++...+++.+.++|+|||.+++++.... .....+.
T Consensus 134 ~i~~~~~D~~~l~~~---~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~e 210 (252)
T 2gb4_A 134 SISLYCCSIFDLPRA---NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAE 210 (252)
T ss_dssp SEEEEESCTTTGGGG---CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHH
T ss_pred ceEEEECccccCCcc---cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHH
Confidence 589999998775431 12789999988777654 3567899999999999995544432211 0123455
Q ss_pred HHHHHHhCCcEEEEE
Q 046623 173 LHELIMSQGFRVIEL 187 (218)
Q Consensus 173 ~~~~~~~~gf~~~~~ 187 (218)
+..++.. +|.+...
T Consensus 211 l~~~l~~-~f~v~~~ 224 (252)
T 2gb4_A 211 LKRLFGT-KCSMQCL 224 (252)
T ss_dssp HHHHHTT-TEEEEEE
T ss_pred HHHHhhC-CeEEEEE
Confidence 5555454 6988776
No 104
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.56 E-value=2.1e-13 Score=114.21 Aligned_cols=132 Identities=14% Similarity=0.182 Sum_probs=102.5
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
....++.+|||+|||+|..+..+++.. ..+++++|+ + +++.++++++..+..++++++.+|+.+... ..+|
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~D 258 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY------PEAD 258 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC------CCCS
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC------CCCC
Confidence 333567899999999999999997653 458999999 8 999999999988887789999999876532 2349
Q ss_pred EEEEcccccCCcc--hHHHHHHHHHHhcCCCceEEEEEee--------------------ccC----ChHHHHHHHHHhC
Q 046623 127 MVIMSDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSE--------------------VRT----RTGDCLHELIMSQ 180 (218)
Q Consensus 127 ~Iv~~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~--------------------~~~----~~~~~~~~~~~~~ 180 (218)
+|++..++++..+ ..++++.+.++|+|||.+++.-... .+. ...+.+..++++.
T Consensus 259 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~a 338 (359)
T 1x19_A 259 AVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESL 338 (359)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHH
T ss_pred EEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHC
Confidence 9999999988766 8899999999999999554443211 111 3344555666889
Q ss_pred CcEEEEE
Q 046623 181 GFRVIEL 187 (218)
Q Consensus 181 gf~~~~~ 187 (218)
||...++
T Consensus 339 Gf~~v~~ 345 (359)
T 1x19_A 339 GYKDVTM 345 (359)
T ss_dssp TCEEEEE
T ss_pred CCceEEE
Confidence 9998877
No 105
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.56 E-value=2.4e-14 Score=116.09 Aligned_cols=126 Identities=21% Similarity=0.244 Sum_probs=97.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +|+++|+++ +++.+++++..++. ++.+..+|+.... ..++||+|++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-----~~~~fD~i~~ 190 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAAN-----IQENYDFIVS 190 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCC-----CCSCEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEecccccc-----ccCCccEEEE
Confidence 3678999999999999999998876 999999999 99999999998886 5899998876543 3578999999
Q ss_pred cccccCC--cchHHHHHHHHHHhcCCCceEEEEEeecc----------CChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEVR----------TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~~----------~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+.++++. +....+++.+.++|+|||.++++...... ....+.+..++ .+|.+...
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~ 257 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYY--KDWEFLEY 257 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHT--TTSEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHh--cCCEEEEE
Confidence 9999875 45679999999999999955554432211 11234455552 34887766
No 106
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=1.4e-13 Score=109.42 Aligned_cols=109 Identities=22% Similarity=0.236 Sum_probs=84.4
Q ss_pred HHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc
Q 046623 42 LAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS 120 (218)
Q Consensus 42 l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (218)
+..++......++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++....+. ++.++.+|+.+..
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~----- 101 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA----- 101 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC-----
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc-----
Confidence 34444433335678999999999999999988765 999999999 99999999988764 4889988876543
Q ss_pred cCCCCcEEEEcc-ccc--CCcchHHHHHHHHHHhcCCCceE
Q 046623 121 ELGEFDMVIMSD-VFY--DPEEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 121 ~~~~~D~Iv~~~-~~~--~~~~~~~~l~~~~~lL~~gG~~~ 158 (218)
..++||+|++.. .++ +.++...+++.+.++|+|||.++
T Consensus 102 ~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li 142 (252)
T 1wzn_A 102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFI 142 (252)
T ss_dssp CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 236799999752 222 23567889999999999999544
No 107
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.55 E-value=5e-14 Score=112.30 Aligned_cols=124 Identities=18% Similarity=0.157 Sum_probs=96.4
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
..++.+|||+|||+|.++..+++. + ..+++++|+++ +++.++++++.+++.+++++..+|+.+.. +.++||+
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~D~ 165 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI-----EEENVDH 165 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC-----CCCSEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc-----CCCCcCE
Confidence 357889999999999999999876 4 46999999999 99999999999998877999998876432 4567999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCC--cEEEEE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQG--FRVIEL 187 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~g--f~~~~~ 187 (218)
|+++. .+...+++.+.++|+|||.++++ ........+....+ .+.| |...++
T Consensus 166 v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~--~~~~~~~~~~~~~l-~~~g~~f~~~~~ 219 (255)
T 3mb5_A 166 VILDL-----PQPERVVEHAAKALKPGGFFVAY--TPCSNQVMRLHEKL-REFKDYFMKPRT 219 (255)
T ss_dssp EEECS-----SCGGGGHHHHHHHEEEEEEEEEE--ESSHHHHHHHHHHH-HHTGGGBSCCEE
T ss_pred EEECC-----CCHHHHHHHHHHHcCCCCEEEEE--ECCHHHHHHHHHHH-HHcCCCccccEE
Confidence 99843 45578999999999999944333 23223444555555 8888 876554
No 108
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.55 E-value=5.1e-14 Score=108.97 Aligned_cols=95 Identities=19% Similarity=0.083 Sum_probs=80.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|..+..+ +..+++++|+++ +++.++++. .++.++.+|+.+... +.++||+|+++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~----~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPF----PGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCS----CSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCC----CCCcEEEEEEc
Confidence 7789999999999988877 444899999999 999988775 347888888776543 56789999999
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.++++..+..++++.+.++|+|||.+++.
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 103 TTLEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp SCTTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 99999999999999999999999944443
No 109
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.55 E-value=4e-14 Score=119.47 Aligned_cols=112 Identities=21% Similarity=0.197 Sum_probs=91.7
Q ss_pred HHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 41 ILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 41 ~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
.+.+++.+ ....++.+|||+|||+|.+++.+++.|+.+|+++|++++++.++++++.+++.++++++.+|+.+...
T Consensus 50 ~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 126 (376)
T 3r0q_C 50 AYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISL--- 126 (376)
T ss_dssp HHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCC---
T ss_pred HHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCc---
Confidence 34445544 33467889999999999999999988878999999998889999999999998889999999876543
Q ss_pred ccCCCCcEEEEcccccC---CcchHHHHHHHHHHhcCCCce
Q 046623 120 SELGEFDMVIMSDVFYD---PEEMVGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~---~~~~~~~l~~~~~lL~~gG~~ 157 (218)
+ ++||+|+++.+.+. ......++..+.++|+|||.+
T Consensus 127 -~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~l 165 (376)
T 3r0q_C 127 -P-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVM 165 (376)
T ss_dssp -S-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEE
T ss_pred -C-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEE
Confidence 3 78999999654443 356888999999999999933
No 110
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.55 E-value=3.1e-14 Score=120.89 Aligned_cols=136 Identities=18% Similarity=0.098 Sum_probs=97.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCC-CCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGL-GGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.+++.++.+|+++|+++ +++.+++|++.+++ ..+++++.+|+.+..........+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46789999999999999999988777999999999 99999999999998 54689999887654221101146899999
Q ss_pred EcccccCC---------cchHHHHHHHHHHhcCCCceEEEEEeeccC--ChHHHHHHHHHhCCcEEEEE
Q 046623 130 MSDVFYDP---------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~---------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++|.+.. .....++..+.++|+|||.+++.++..... ...+.+...+.+.|+.+..+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 98876432 457788999999999999333333222111 12333443335666544443
No 111
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.55 E-value=3.4e-13 Score=113.48 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=103.3
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
....+..+|||+|||+|..+..+++. +..+++++|+ + +++.+++++...++.++++++.+|+.+. . +. .||
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~----p~-~~D 270 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET-I----PD-GAD 270 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC-C----CS-SCS
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC-C----CC-Cce
Confidence 33345689999999999999998765 3458999999 8 9999999999888878899999998732 2 33 799
Q ss_pred EEEEcccccCCcchH--HHHHHHHHHhcCCCceEEEEEeecc--------------------CChHHHHHHHHHhCCcEE
Q 046623 127 MVIMSDVFYDPEEMV--GLGKTLKRVCGTGRHTVVWAVSEVR--------------------TRTGDCLHELIMSQGFRV 184 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~--~~l~~~~~lL~~gG~~~i~~~~~~~--------------------~~~~~~~~~~~~~~gf~~ 184 (218)
+|++..++++..+.. .+++.+.++|+|||.+++.-..... ....+.+..++++.||..
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 999999998876654 7999999999999955554322211 123455666679999999
Q ss_pred EEE
Q 046623 185 IEL 187 (218)
Q Consensus 185 ~~~ 187 (218)
.++
T Consensus 351 ~~~ 353 (369)
T 3gwz_A 351 ERS 353 (369)
T ss_dssp EEE
T ss_pred EEE
Confidence 888
No 112
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.54 E-value=2.6e-13 Score=106.74 Aligned_cols=129 Identities=15% Similarity=0.144 Sum_probs=90.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.++++++.+ .++.++.+|....... ....++||+|+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~-~~~~~~~D~v~ 148 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEY-ANIVEKVDVIY 148 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGG-TTTSCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccc-cccCccEEEEE
Confidence 46789999999999999999866 546999999999 999999887654 4588998887762110 00226899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCC-------hHHHHHHHHHhCCcEEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTR-------TGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~-------~~~~~~~~~~~~gf~~~~~ 187 (218)
.. + ........+++.+.++|+|||.+++......... ..+.+. .+.+.||.+..+
T Consensus 149 ~~-~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~ 210 (230)
T 1fbn_A 149 ED-V-AQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDE 210 (230)
T ss_dssp EC-C-CSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEE
T ss_pred Ee-c-CChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEE
Confidence 42 1 1223347789999999999995555422111111 224455 448889988776
No 113
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.54 E-value=2.4e-13 Score=112.69 Aligned_cols=128 Identities=19% Similarity=0.164 Sum_probs=101.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
+..+|||+|||+|..+..+++. +..+++++|+ + +++.+++++...++.+++++..+|+.+. . +. +||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~----p~-~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP-L----PA-GAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C----CC-SCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC-C----CC-CCcEEEE
Confidence 4579999999999999998754 4468999999 8 9999999999888878899999998732 2 23 7999999
Q ss_pred cccccCCcc--hHHHHHHHHHHhcCCCceEEEEEeec------------------cCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSEV------------------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~------------------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
..++|+.++ ..++++++.++|+|||.+++.-.... +....+.+..++++.||...++
T Consensus 242 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred ehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999998766 48999999999999995554422110 1223455666679999999887
No 114
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.54 E-value=4.4e-13 Score=112.95 Aligned_cols=132 Identities=14% Similarity=0.165 Sum_probs=98.8
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
..++.+|||+| |+|.+++.++..+. .+|+++|+++ +++.+++|++.+++. +++++.+|+.+.... ...++||+|
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~--~~~~~fD~V 245 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPD--YALHKFDTF 245 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCT--TTSSCBSEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchh--hccCCccEE
Confidence 34678999999 99999999988765 6999999999 999999999999876 699999998763210 023589999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChH--HHHHHHHH-hCCcEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTG--DCLHELIM-SQGFRVIEL 187 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~--~~~~~~~~-~~gf~~~~~ 187 (218)
++++|++.. ....+++.+.++|+|||.++++.......... ..+...+. ..||.+..+
T Consensus 246 i~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 306 (373)
T 2qm3_A 246 ITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDI 306 (373)
T ss_dssp EECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEE
T ss_pred EECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhh
Confidence 998887543 36889999999999999655554433112221 34445446 788877554
No 115
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.54 E-value=9.7e-14 Score=112.82 Aligned_cols=98 Identities=21% Similarity=0.313 Sum_probs=80.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCC---cEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEF---DMV 128 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---D~I 128 (218)
++.+|||+|||+|.+++.+++.+..+|+++|+++ +++.+++|+..+++.++++++.+|+.+.. .++| |+|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~------~~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF------KEKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG------GGGTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc------ccccCCCCEE
Confidence 5579999999999999999876546999999999 99999999999998777999999987632 1467 999
Q ss_pred EEcccccCCc-------------------chHHHHHHHH-HHhcCCCc
Q 046623 129 IMSDVFYDPE-------------------EMVGLGKTLK-RVCGTGRH 156 (218)
Q Consensus 129 v~~~~~~~~~-------------------~~~~~l~~~~-~lL~~gG~ 156 (218)
++|+|+.... +...+++.+. +.++|||.
T Consensus 197 vsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~ 244 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKI 244 (284)
T ss_dssp EECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCE
T ss_pred EEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCE
Confidence 9998775321 1126888999 99999993
No 116
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.54 E-value=5.1e-14 Score=116.75 Aligned_cols=102 Identities=23% Similarity=0.283 Sum_probs=86.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.++.+|||+|||+|.++..+++.+..+|+++|++++++.++++++.+++.++++++.+|+.+... +.++||+|++.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~Ivs~ 112 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHL----PFPKVDIIISE 112 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----SSSCEEEEEEC
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccC----CCCcccEEEEe
Confidence 46789999999999999999988877999999998888899999999988889999999877643 45789999997
Q ss_pred cccc---CCcchHHHHHHHHHHhcCCCce
Q 046623 132 DVFY---DPEEMVGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 132 ~~~~---~~~~~~~~l~~~~~lL~~gG~~ 157 (218)
.+.+ +...+..++..+.++|+|||.+
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 141 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVLYARDHYLVEGGLI 141 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEE
T ss_pred CchhhcccHHHHHHHHHHHHhhcCCCeEE
Confidence 5433 4567889999999999999944
No 117
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.53 E-value=4.1e-14 Score=117.95 Aligned_cols=114 Identities=28% Similarity=0.295 Sum_probs=87.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||+|||+|.++..+++.+. .+++++|+++ +++.+++++..++.. ..+...|..+. ..++||+|++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~------~~~~fD~Iv~ 267 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSE------VKGRFDMIIS 267 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTT------CCSCEEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEcccccc------ccCCeeEEEE
Confidence 466999999999999999987764 4899999999 999999999988865 56777776543 3468999999
Q ss_pred cccccC-----CcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHH
Q 046623 131 SDVFYD-----PEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 131 ~~~~~~-----~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~ 176 (218)
++++++ ......+++.+.++|+|||.++++.. . .......+...
T Consensus 268 ~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~-~-~~~~~~~l~~~ 316 (343)
T 2pjd_A 268 NPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN-A-FLPYPDVLDET 316 (343)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE-T-TSSHHHHHHHH
T ss_pred CCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc-C-CCCcHHHHHHh
Confidence 999875 24568899999999999994444433 2 22334445554
No 118
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.53 E-value=7.5e-15 Score=111.41 Aligned_cols=129 Identities=12% Similarity=-0.023 Sum_probs=95.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
+..+|||+|||+|.+++.++.. +..+|+++|+|+ +++.++.++..+|...++.+ .|.... .+.++||+|++
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-----~~~~~~DvVLa 121 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-----VYKGTYDVVFL 121 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-----HTTSEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-----CCCCCcChhhH
Confidence 4679999999999999999754 334999999999 99999999999988755655 443222 26678999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEe--e-------ccCChHHHHHHHHHhCCcEEEEEEcc
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVS--E-------VRTRTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~--~-------~~~~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
...+|...+.+..+..+.+.|+||| +++..+ . ....-...++..+.+..+.+.+..+.
T Consensus 122 ~k~LHlL~~~~~al~~v~~~L~pgg--vfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~ 188 (200)
T 3fzg_A 122 LKMLPVLKQQDVNILDFLQLFHTQN--FVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG 188 (200)
T ss_dssp ETCHHHHHHTTCCHHHHHHTCEEEE--EEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET
T ss_pred hhHHHhhhhhHHHHHHHHHHhCCCC--EEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC
Confidence 9999988777777789999999999 555444 1 11234444555545666666655443
No 119
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.53 E-value=8.1e-14 Score=107.83 Aligned_cols=110 Identities=18% Similarity=0.087 Sum_probs=85.5
Q ss_pred HHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc
Q 046623 40 LILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 40 ~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (218)
......+......++.+|||+|||+|..+..+++.+ .+|+++|+++ +++.+++++...+.. ++++..+|+.....
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~-- 139 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQ-- 139 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG--
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCc--
Confidence 333333333344678899999999999999998885 4999999999 999999999988876 58999988766443
Q ss_pred cccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 119 LSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
..++||+|+++.++++..+ .+.++|+|||.+++.+
T Consensus 140 --~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 140 --ARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp --GGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEE
T ss_pred --cCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEE
Confidence 4578999999888766543 5788999999444443
No 120
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=3.1e-13 Score=107.66 Aligned_cols=155 Identities=17% Similarity=0.112 Sum_probs=104.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.++++++..++.++++++.+|..+.... ....++||+|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~-~~~~~~fD~V 140 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLES-LGECPAFDLI 140 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT-CCSCCCCSEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh-cCCCCCeEEE
Confidence 35679999999999999999865 2 45999999999 9999999999999887899999887543211 1123589999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC--------------ChHHHHHHHHHhCCcEEEEE-EccCCC
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--------------RTGDCLHELIMSQGFRVIEL-TCQLGG 193 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--------------~~~~~~~~~~~~~gf~~~~~-~~~~~~ 193 (218)
++... ......+++.+.++|+||| ++++...... ...++.+.+.....|....+ |+ ..+
T Consensus 141 ~~d~~---~~~~~~~l~~~~~~LkpGG--~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~ 214 (248)
T 3tfw_A 141 FIDAD---KPNNPHYLRWALRYSRPGT--LIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV-GTK 214 (248)
T ss_dssp EECSC---GGGHHHHHHHHHHTCCTTC--EEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC-STT
T ss_pred EECCc---hHHHHHHHHHHHHhcCCCe--EEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC-CCC
Confidence 98553 3556789999999999999 3343332211 13445555544556777666 33 222
Q ss_pred CCCCceeEEEecCC-ccccccc
Q 046623 194 GCPEAFAVYELIPP-MHEENFH 214 (218)
Q Consensus 194 ~~~~~~~l~~~~~~-~~~~~~~ 214 (218)
....+.+.++++. .++--||
T Consensus 215 -~~DG~~i~~~~~~~~~~~~~~ 235 (248)
T 3tfw_A 215 -GWDGFTLAWVNAAENLYFQSH 235 (248)
T ss_dssp -CSEEEEEEEECCC--------
T ss_pred -CCCeeEEEEEeCCcchHhHhc
Confidence 2355666666665 4444444
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=1.8e-13 Score=109.03 Aligned_cols=124 Identities=22% Similarity=0.143 Sum_probs=95.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHh-CCCCceEEEEeecCCCCccccccCCCCc
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEAN-GLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
..++.+|||+|||+|.++..+++. + ..+++++|+++ +++.++++++.+ + ..++.+...|+.+... +.++||
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~----~~~~~D 168 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAEL----EEAAYD 168 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCC----CTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCC----CCCCcC
Confidence 357789999999999999999866 4 45999999999 999999999887 6 4568999888765532 456899
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+|+++. .+...+++.+.++|+|||.++++. .......+....+ .+.||...++
T Consensus 169 ~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~--~~~~~~~~~~~~l-~~~gf~~~~~ 221 (258)
T 2pwy_A 169 GVALDL-----MEPWKVLEKAALALKPDRFLVAYL--PNITQVLELVRAA-EAHPFRLERV 221 (258)
T ss_dssp EEEEES-----SCGGGGHHHHHHHEEEEEEEEEEE--SCHHHHHHHHHHH-TTTTEEEEEE
T ss_pred EEEECC-----cCHHHHHHHHHHhCCCCCEEEEEe--CCHHHHHHHHHHH-HHCCCceEEE
Confidence 999842 456789999999999999444433 3223455555665 7889986654
No 122
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.53 E-value=1.8e-13 Score=106.95 Aligned_cols=134 Identities=19% Similarity=0.154 Sum_probs=97.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccccc-CCCCcE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSE-LGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~D~ 127 (218)
.++.+|||+|||+|..+..+++. + ..+++++|+++ +++.+++++...++.++++++.+|..+........ .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 35679999999999999999866 2 35999999999 99999999999998878999998875432110001 267999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC--------------ChHHHHHHHHHhCCcEEEEEEcc
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--------------RTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--------------~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
|++..+ ......+++.+.++|+||| ++++...... ...++.+.+.....|....+|+.
T Consensus 137 v~~d~~---~~~~~~~l~~~~~~L~pgG--~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~ 208 (223)
T 3duw_A 137 IFIDAD---KQNNPAYFEWALKLSRPGT--VIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV 208 (223)
T ss_dssp EEECSC---GGGHHHHHHHHHHTCCTTC--EEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred EEEcCC---cHHHHHHHHHHHHhcCCCc--EEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc
Confidence 998655 2456789999999999999 4443333221 13455666544556777766763
No 123
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.53 E-value=5.5e-13 Score=102.87 Aligned_cols=123 Identities=21% Similarity=0.186 Sum_probs=92.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|.++..+++.+..+++++|+++ +++.++++++.+++ +++++.+|+.+. ..+||+|+
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~-------~~~~D~v~ 117 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEF-------NSRVDIVI 117 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGC-------CCCCSEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHc-------CCCCCEEE
Confidence 356789999999999999999888766899999999 99999999988876 589998887653 24799999
Q ss_pred EcccccCC--cchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 130 MSDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++|++.. .....+++.+.+++ |+ ++ +.... .....+.+...+.+.||.+..+
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~-~~-~~~~~-~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DV-VY-SIHLA-KPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SE-EE-EEEEC-CHHHHHHHHHHHHHTTEEEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--Cc-EE-EEEeC-CcCCHHHHHHHHHHCCCeEEEE
Confidence 99998754 34567888888887 43 22 22211 1233344455558899987665
No 124
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=1.5e-13 Score=109.50 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=86.1
Q ss_pred HHHhcCCCCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccccc
Q 046623 44 QFISTHFDFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSE 121 (218)
Q Consensus 44 ~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 121 (218)
.++......++.+|||+|||+|.++..+++. +..+++++|+++ +++.++++. .++.+..+|+.... +
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~-----~ 92 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWK-----P 92 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCC-----C
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcC-----c
Confidence 3444333456789999999999999998765 345899999999 999988771 45889998876543 3
Q ss_pred CCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 122 LGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
.++||+|+++.++++..+...+++.+.++|+|||.+++..
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 5789999999999999999999999999999999555443
No 125
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.53 E-value=5.4e-14 Score=113.72 Aligned_cols=136 Identities=12% Similarity=0.056 Sum_probs=97.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..++.. +..+|+++|+++ +++.+++|++..++. +++++..|............++||+|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCEE
Confidence 46789999999999999998763 336999999999 999999999998875 58888877654321000015689999
Q ss_pred EEcccccCC------------------cchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHh-CCcEEEEEE
Q 046623 129 IMSDVFYDP------------------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMS-QGFRVIELT 188 (218)
Q Consensus 129 v~~~~~~~~------------------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~-~gf~~~~~~ 188 (218)
+++.|+... .....+++.+.++|+|||.+++..++......++.+..++.+ .+|....++
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~~~~~~ 239 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIIIK 239 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEEEECCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcEEecCc
Confidence 998776432 345789999999999999554444444444445666666544 456655443
No 126
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.53 E-value=3.9e-14 Score=115.11 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=93.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh-----------------CCC------------
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEAN-----------------GLG------------ 101 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~-----------------~~~------------ 101 (218)
.++.+|||+|||+|.....++..+..+|+++|+++ +++.++++++.. +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 46789999999999966555554445999999999 999888765321 100
Q ss_pred CceEEEEeecCCC-Cccc-cccCCCCcEEEEcccccC----CcchHHHHHHHHHHhcCCCceEEEEEee-----------
Q 046623 102 GRVEVRELVWGSD-DLSQ-LSELGEFDMVIMSDVFYD----PEEMVGLGKTLKRVCGTGRHTVVWAVSE----------- 164 (218)
Q Consensus 102 ~~~~~~~~d~~~~-~~~~-~~~~~~~D~Iv~~~~~~~----~~~~~~~l~~~~~lL~~gG~~~i~~~~~----------- 164 (218)
..+.++.+|+... .... ..+.++||+|+++.++++ .+++..+++.+.++|||||.+++.....
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 0145666677652 2110 113467999999999887 5578999999999999999555532111
Q ss_pred -ccCChHHHHHHHHHhCCcEEEEE
Q 046623 165 -VRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 165 -~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.+....+.+..++.+.||.+..+
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEe
Confidence 11224455666669999998876
No 127
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=1.6e-13 Score=110.93 Aligned_cols=124 Identities=18% Similarity=0.083 Sum_probs=93.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.+++. +..+|+++|+++ +++.+++|++.+++.+ +.++.+|+.+. . ..++||+|+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~-~----~~~~~D~Vi 191 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDV-E----LKDVADRVI 191 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGC-C----CTTCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHc-C----ccCCceEEE
Confidence 46789999999999999999876 456999999999 9999999999998864 78998887655 2 246799999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc---CChHHHHHHHHHhCCcEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR---TRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~---~~~~~~~~~~~~~~gf~~~ 185 (218)
++++. ...+++..+.++|+|||.+++.+..... ....+.++.+-...++.+.
T Consensus 192 ~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 192 MGYVH----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp ECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred ECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 98774 6678999999999999954444433322 2233445555233455544
No 128
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.53 E-value=1.7e-13 Score=110.83 Aligned_cols=123 Identities=15% Similarity=0.169 Sum_probs=94.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|.++..+++. + ..+++++|+++ +++.++++++..++..++.+..+|+.+. . +.++||+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~----~~~~~D~V 185 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-F----DEKDVDAL 185 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-C----SCCSEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-c----cCCccCEE
Confidence 56789999999999999999876 4 46999999999 9999999999888756689998887654 2 44689999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++. ++...+++.+.++|+|||.+++. ........+....+ .+.||...++
T Consensus 186 ~~~~-----~~~~~~l~~~~~~L~pgG~l~~~--~~~~~~~~~~~~~l-~~~gf~~~~~ 236 (277)
T 1o54_A 186 FLDV-----PDPWNYIDKCWEALKGGGRFATV--CPTTNQVQETLKKL-QELPFIRIEV 236 (277)
T ss_dssp EECC-----SCGGGTHHHHHHHEEEEEEEEEE--ESSHHHHHHHHHHH-HHSSEEEEEE
T ss_pred EECC-----cCHHHHHHHHHHHcCCCCEEEEE--eCCHHHHHHHHHHH-HHCCCceeEE
Confidence 9843 45578999999999999943333 33223344555555 7899987665
No 129
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.52 E-value=4e-14 Score=110.80 Aligned_cols=129 Identities=15% Similarity=0.146 Sum_probs=91.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
++.+|||||||+|..+..+++.. ..+|+++|+++ +++.+++++..+++.+ +.++.+|..+... ...+.+++|.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~-~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLH-KMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHH-HHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHH-HHcCCCChheEEE
Confidence 46799999999999999998664 35899999999 9999999999888764 8999888654311 1125678999998
Q ss_pred c--ccccCCcch------HHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 131 S--DVFYDPEEM------VGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 131 ~--~~~~~~~~~------~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
+ +++...... ..+++.+.++|+||| .+++.+....+.+.....+-...+|...
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG--~l~i~td~~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGG--VFHMATDWEPYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEE--EEEEEESCHHHHHHHHHHHHTSTTEEEC
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCc--EEEEEeCCHHHHHHHHHHHHhCCCcccc
Confidence 7 444322221 359999999999999 4444444344444444444223456543
No 130
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.52 E-value=2.2e-14 Score=121.39 Aligned_cols=132 Identities=14% Similarity=0.011 Sum_probs=93.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCC-ceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGG-RVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.+++.++.+|+++|+++ +++.|++|++.+++.. +++++.+|+.+..........+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 46789999999999999999987777999999999 9999999999999865 699999887653211111235899999
Q ss_pred EcccccC-----C----cchHHHHHHHHHHhcCCCceEEEEEeeccCC----hHHHHHHHHHhCCcEEE
Q 046623 130 MSDVFYD-----P----EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTR----TGDCLHELIMSQGFRVI 185 (218)
Q Consensus 130 ~~~~~~~-----~----~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~----~~~~~~~~~~~~gf~~~ 185 (218)
+++|.+. . ..+.+++..+.++|+|||. ++++...... ..+.+.....+.|..+.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~--l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGL--IIASTNAANMTVSQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEE--EEEEECCTTSCHHHHHHHHHHHHTTCCCEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcE--EEEEeCCCcCCHHHHHHHHHHHHHHcCCcEE
Confidence 9888742 1 2245577788899999993 3333332222 22333333356666633
No 131
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.52 E-value=9.1e-15 Score=115.76 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=81.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||||||+|..+..+++....+++++|+++ +++.|+++....+ .++.++.+|+...... .+.++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~--~~~~~FD~i~~ 134 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT--LPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG--SCTTCEEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhccc--ccccCCceEEE
Confidence 47889999999999999999877666899999999 9999999987766 3477887776543211 15678999986
Q ss_pred ccc-----ccCCcchHHHHHHHHHHhcCCCceEE
Q 046623 131 SDV-----FYDPEEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 131 ~~~-----~~~~~~~~~~l~~~~~lL~~gG~~~i 159 (218)
... ..+..+...+++++.++|||||.+.+
T Consensus 135 D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred eeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 432 33456788999999999999994433
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=1.9e-14 Score=107.50 Aligned_cols=100 Identities=24% Similarity=0.226 Sum_probs=79.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|..+..+++.+. +++++|+++ +++.+++++..++. ++++...|+.+.........++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 678999999999999999998876 599999999 99999999998876 58888877754321100012479999998
Q ss_pred ccccCCcchHHHHHHHH--HHhcCCCce
Q 046623 132 DVFYDPEEMVGLGKTLK--RVCGTGRHT 157 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~--~lL~~gG~~ 157 (218)
++++ .....+++.+. ++|+|||.+
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~ 143 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLY 143 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEE
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEE
Confidence 8876 56677788887 899999933
No 133
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.52 E-value=3.8e-13 Score=105.89 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=93.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.+.++.+.+ .++.++.+|+.+..... ...++||+|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~-~~~~~~D~V 151 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYR-MLIAMVDVI 151 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGG-GGCCCEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhc-ccCCcEEEE
Confidence 46789999999999999999765 336999999999 888888887765 45899998887642111 135689999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeec---cCC----hHHHHHHHHHhCCcEEEEE-EccCC
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV---RTR----TGDCLHELIMSQGFRVIEL-TCQLG 192 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---~~~----~~~~~~~~~~~~gf~~~~~-~~~~~ 192 (218)
+++.+ .......++..+.++|+|||.+++.+.... ... ..+.+..+ .+.||.+.++ +..+.
T Consensus 152 ~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gf~~~~~~~~~~~ 220 (233)
T 2ipx_A 152 FADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKM-QQENMKPQEQLTLEPY 220 (233)
T ss_dssp EECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTT-GGGTEEEEEEEECTTT
T ss_pred EEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHH-HHCCCceEEEEecCCc
Confidence 99655 334446678889999999995555332210 001 12224444 8889998875 54443
No 134
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.51 E-value=5e-14 Score=114.43 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=83.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC---CceEEEEeecCCCCccccccCCCCcE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG---GRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
.++.+|||+|||+|..+..++..+. +|+++|+++ +++.++++....+.. .++.+..+|+..... ...+.++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK-DVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH-HSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc-ccccCCCeEE
Confidence 4677999999999999999998876 999999999 999999887543322 236777777654320 0015678999
Q ss_pred EEEc-ccccCCcc-------hHHHHHHHHHHhcCCCceEE
Q 046623 128 VIMS-DVFYDPEE-------MVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 128 Iv~~-~~~~~~~~-------~~~~l~~~~~lL~~gG~~~i 159 (218)
|++. .++++..+ ...+++.+.++|+|||.+++
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9998 88888877 99999999999999994443
No 135
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.51 E-value=7.2e-14 Score=108.01 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=86.5
Q ss_pred HHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 41 ILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 41 ~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
.+..++... ..++.+|||+|||+|.++..+++.+..+++++|+++ +++.++++.... .++.+..+|+.+...
T Consensus 31 ~~~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~i~~~~~d~~~~~~--- 103 (215)
T 2pxx_A 31 SFRALLEPE-LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV---PQLRWETMDVRKLDF--- 103 (215)
T ss_dssp HHHHHHGGG-CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC---TTCEEEECCTTSCCS---
T ss_pred HHHHHHHHh-cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC---CCcEEEEcchhcCCC---
Confidence 455555542 246779999999999999999888766899999999 999999887541 458899988876543
Q ss_pred ccCCCCcEEEEcccccCC---------------cchHHHHHHHHHHhcCCCceEE
Q 046623 120 SELGEFDMVIMSDVFYDP---------------EEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~---------------~~~~~~l~~~~~lL~~gG~~~i 159 (218)
+.++||+|+++.++++. .+...+++.+.++|+|||.+++
T Consensus 104 -~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 104 -PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp -CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 45789999998877432 3568899999999999993333
No 136
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.51 E-value=4.5e-14 Score=127.74 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=106.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC-CceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG-GRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.+++.|+.+|+++|+|+ +++.+++|++.|++. .+++++.+|+.+.... ..++||+|+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~---~~~~fD~Ii 614 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIF 614 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH---CCCCEEEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh---cCCCccEEE
Confidence 36789999999999999999988887899999999 999999999999987 5799999887653211 346899999
Q ss_pred EcccccCC-----------cchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEccCCC----C
Q 046623 130 MSDVFYDP-----------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQLGG----G 194 (218)
Q Consensus 130 ~~~~~~~~-----------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~~~----~ 194 (218)
+++|.+.. ..+..++..+.++|+|||.++ ++...+... .....+ .+.|+....+.....+ .
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~--~s~~~~~~~-~~~~~l-~~~g~~~~~i~~~~lp~df~~ 690 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM--FSNNKRGFR-MDLDGL-AKLGLKAQEITQKTLSQDFAR 690 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEE--EEECCTTCC-CCHHHH-HHTTEEEEECTTTTCCGGGTT
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEE--EEECCcccc-cCHHHH-HHcCCceeeeeeccCCCCCCC
Confidence 98886531 346778999999999999333 333321111 112333 6788887676333222 3
Q ss_pred CCCceeEEEec
Q 046623 195 CPEAFAVYELI 205 (218)
Q Consensus 195 ~~~~~~l~~~~ 205 (218)
.+....+|.++
T Consensus 691 ~~~ih~~w~i~ 701 (703)
T 3v97_A 691 NRQIHNCWLIT 701 (703)
T ss_dssp CSSCCEEEEEE
T ss_pred CCcceEEEEEe
Confidence 45667777764
No 137
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.51 E-value=2.7e-13 Score=112.19 Aligned_cols=131 Identities=17% Similarity=0.193 Sum_probs=101.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++. +..+++++|++.+++.+++++...++.++++++.+|+.+... .+.||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDY-----GNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCC-----CSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCC-----CCCCcEEEE
Confidence 46679999999999999998765 345999999998888899999888877779999999876532 234999999
Q ss_pred cccccCC--cchHHHHHHHHHHhcCCCceEEEEEeec-----------------------cCChHHHHHHHHHhCCcEEE
Q 046623 131 SDVFYDP--EEMVGLGKTLKRVCGTGRHTVVWAVSEV-----------------------RTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 131 ~~~~~~~--~~~~~~l~~~~~lL~~gG~~~i~~~~~~-----------------------~~~~~~~~~~~~~~~gf~~~ 185 (218)
..++++. ++...+++.+.++|+|||.+++.-.... +....+.+..++++.||...
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHS 318 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCee
Confidence 9999887 4557999999999999995544422111 11224556666689999988
Q ss_pred EE
Q 046623 186 EL 187 (218)
Q Consensus 186 ~~ 187 (218)
++
T Consensus 319 ~~ 320 (335)
T 2r3s_A 319 QL 320 (335)
T ss_dssp EE
T ss_pred eE
Confidence 87
No 138
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=8.1e-14 Score=110.34 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=83.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-cccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-LSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.+. +|+++|+++ +++.++++... .++.++.+|+.+..... ......||+|+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc----cCceEEECcccccccccccccccCccEEE
Confidence 4677999999999999999998877 899999999 99999887622 35899998887654311 11123599999
Q ss_pred EcccccCCc--chHHHHHHHHHHhcCCCceEEE
Q 046623 130 MSDVFYDPE--EMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 130 ~~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
++.++++.. +...+++.+.++|+|||.+++.
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999998876 7899999999999999944444
No 139
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=8.5e-15 Score=115.65 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=79.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+..+|+++|+++ +++.++++.+..+ .++.++.+|+.+... ..+.++||+|++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~--~~~~~~fD~V~~ 134 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAP--TLPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGG--GSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhc--ccCCCceEEEEE
Confidence 35779999999999999999876666899999999 9999999887666 458888888765411 014578999999
Q ss_pred -cccc----cCCcchHHHHHHHHHHhcCCCceE
Q 046623 131 -SDVF----YDPEEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 131 -~~~~----~~~~~~~~~l~~~~~lL~~gG~~~ 158 (218)
...+ .+......+++.+.++|||||.++
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEE
Confidence 3322 123345578999999999999433
No 140
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.51 E-value=7.3e-14 Score=109.61 Aligned_cols=116 Identities=18% Similarity=0.181 Sum_probs=88.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccccc-CCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSE-LGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~D~Iv 129 (218)
.++.+|||+|||+|.++..+++.+. +|+++|+++ +++.++++. .+++++.+|+.+... .. .++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~---~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA------PHADVYEWNGKGELP---AGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC------TTSEEEECCSCSSCC---TTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC------CCceEEEcchhhccC---CcCCCCEEEEE
Confidence 4678999999999999999988865 999999999 999998871 458999999853321 13 57899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
++ .+...+++.+.++|+|||.++ .........+....+ .+.||....+
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~---~~~~~~~~~~~~~~l-~~~Gf~~~~~ 164 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFL---YVGPRLNVPEVPERL-AAVGWDIVAE 164 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEE---EEESSSCCTHHHHHH-HHTTCEEEEE
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEE---EeCCcCCHHHHHHHH-HHCCCeEEEE
Confidence 86 356788899999999999333 222223344544444 8999998776
No 141
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.51 E-value=5.7e-13 Score=112.30 Aligned_cols=124 Identities=17% Similarity=0.122 Sum_probs=94.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.+++.++..+. .+++++|+++ +++.+++|++.+++.+++++..+|+.+... +.++||+|+
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~----~~~~fD~Ii 291 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ----YVDSVDFAI 291 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG----TCSCEEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc----ccCCcCEEE
Confidence 4678999999999999999988765 3899999999 999999999999986679999998876543 457899999
Q ss_pred EcccccCC----cc----hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 130 MSDVFYDP----EE----MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~----~~----~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++|+... .. ...+++.+.++| +|..+++++ . .+.+...+.+.||...+.
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-----~-~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-----E-KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-----C-HHHHHHHHHHTTEEEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-----C-HHHHHHHHHHcCCEEEEE
Confidence 99887542 11 366778888877 443343332 1 233444557889998776
No 142
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.50 E-value=5.7e-14 Score=116.83 Aligned_cols=118 Identities=16% Similarity=0.160 Sum_probs=91.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.+++. ++ ++.+|+++|+++ +++.+++|++.+++..++.++.+|..+.. ++||+|+++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-------~~fD~Vi~d 265 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-------VKGNRVIMN 265 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-------CCEEEEEEC
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-------CCCcEEEEC
Confidence 678999999999999999 87 677999999999 99999999999998667999998876532 679999997
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhC-CcEEEEE
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQ-GFRVIEL 187 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~-gf~~~~~ 187 (218)
+|.+. ..+++.+.++|+|||.+++..+... .....+.+ .+. ++.+..+
T Consensus 266 pP~~~----~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l-~~~~~~~i~~~ 314 (336)
T 2yx1_A 266 LPKFA----HKFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLF-EKKCDCEVLEK 314 (336)
T ss_dssp CTTTG----GGGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHH-HHHSEEEEEEE
T ss_pred CcHhH----HHHHHHHHHHcCCCCEEEEEEeecC---chHHHHHH-HHhcCCcEEEE
Confidence 66442 4889999999999994444444332 33444444 554 6665444
No 143
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.50 E-value=6.9e-13 Score=110.63 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=101.6
Q ss_pred CCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 54 NKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
+.+|||+|||+|..+..+++. +..+++++|+ + +++.+++++...+..++++++.+|+.+... ...+.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN---FEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG---GTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc---cCCCCccEEEEe
Confidence 789999999999999998765 3468999999 6 999999999888887789999999876531 023569999999
Q ss_pred ccccCCcc--hHHHHHHHHHHhcCCCceEEEEEee-----------------------ccCChHHHHHHHHHhCCcEEEE
Q 046623 132 DVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSE-----------------------VRTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 132 ~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~-----------------------~~~~~~~~~~~~~~~~gf~~~~ 186 (218)
.++|+..+ ...+++.+.++|+|||.+++.-... .+....+.+..++++.||.+.+
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 99988764 4899999999999999555543211 1122345566667999999988
Q ss_pred E
Q 046623 187 L 187 (218)
Q Consensus 187 ~ 187 (218)
.
T Consensus 336 ~ 336 (352)
T 3mcz_A 336 R 336 (352)
T ss_dssp E
T ss_pred e
Confidence 5
No 144
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.50 E-value=3.8e-13 Score=109.20 Aligned_cols=149 Identities=15% Similarity=0.135 Sum_probs=97.3
Q ss_pred ccchhHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEE-Eee
Q 046623 34 WLWDSALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVR-ELV 110 (218)
Q Consensus 34 ~~w~~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~-~~d 110 (218)
++-.++..|...+.... ..++.+|||+|||+|.++..+++.|+.+|+++|+++ +++.+.++- .++... ..+
T Consensus 65 yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~n 138 (291)
T 3hp7_A 65 YVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYN 138 (291)
T ss_dssp SSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCC
T ss_pred cccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccC
Confidence 34467778888877633 357889999999999999999888888999999999 887743321 223222 122
Q ss_pred cCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc---C---------------ChHHH
Q 046623 111 WGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR---T---------------RTGDC 172 (218)
Q Consensus 111 ~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~---~---------------~~~~~ 172 (218)
+....... .+..+||+|+++-.+++ +..++..+.++|+|||.+++++-+... . ...+.
T Consensus 139 i~~l~~~~-l~~~~fD~v~~d~sf~s---l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~ 214 (291)
T 3hp7_A 139 FRYAEPVD-FTEGLPSFASIDVSFIS---LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLET 214 (291)
T ss_dssp GGGCCGGG-CTTCCCSEEEECCSSSC---GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHH
T ss_pred ceecchhh-CCCCCCCEEEEEeeHhh---HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHH
Confidence 22211111 13345999999766653 588999999999999966665322110 0 12233
Q ss_pred HHHHHHhCCcEEEEEEccCC
Q 046623 173 LHELIMSQGFRVIELTCQLG 192 (218)
Q Consensus 173 ~~~~~~~~gf~~~~~~~~~~ 192 (218)
+..++...||.+..+...+-
T Consensus 215 v~~~~~~~Gf~v~~~~~spi 234 (291)
T 3hp7_A 215 VTAFAVDYGFSVKGLDFSPI 234 (291)
T ss_dssp HHHHHHHTTEEEEEEEECSS
T ss_pred HHHHHHHCCCEEEEEEECCC
Confidence 34444889999988843333
No 145
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.50 E-value=9.5e-13 Score=104.89 Aligned_cols=85 Identities=18% Similarity=0.164 Sum_probs=65.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccccc--CCCCcEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSE--LGEFDMV 128 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~D~I 128 (218)
++.+|||+|||+|.+++.++.. +..+++++|+++ +++.+++|++.+++.++++++.+|..+........ .++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5679999999999999888654 345999999999 99999999999988777999999865521111111 2589999
Q ss_pred EEcccccCC
Q 046623 129 IMSDVFYDP 137 (218)
Q Consensus 129 v~~~~~~~~ 137 (218)
++++|++..
T Consensus 145 ~~npp~~~~ 153 (254)
T 2h00_A 145 MCNPPFFAN 153 (254)
T ss_dssp EECCCCC--
T ss_pred EECCCCccC
Confidence 999887643
No 146
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.50 E-value=1.5e-13 Score=111.11 Aligned_cols=122 Identities=14% Similarity=0.162 Sum_probs=93.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHh-CCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEAN-GLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.++++++.+ +. .++++..+|+.+. . +.++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~-~----~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADF-I----SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTC-C----CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhcc-C----cCCCccE
Confidence 56789999999999999999865 345999999999 999999999887 64 3589998888762 2 4568999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
|+++ .++...+++.+.++|+|||.+++. ........+....+ .+.||...++
T Consensus 183 Vi~~-----~~~~~~~l~~~~~~LkpgG~l~i~--~~~~~~~~~~~~~l-~~~Gf~~~~~ 234 (275)
T 1yb2_A 183 VIAD-----IPDPWNHVQKIASMMKPGSVATFY--LPNFDQSEKTVLSL-SASGMHHLET 234 (275)
T ss_dssp EEEC-----CSCGGGSHHHHHHTEEEEEEEEEE--ESSHHHHHHHHHHS-GGGTEEEEEE
T ss_pred EEEc-----CcCHHHHHHHHHHHcCCCCEEEEE--eCCHHHHHHHHHHH-HHCCCeEEEE
Confidence 9983 345678999999999999933333 33222334444454 7889987765
No 147
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.50 E-value=1.4e-13 Score=107.38 Aligned_cols=125 Identities=19% Similarity=0.166 Sum_probs=95.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|..+..+++.+ .+++++|+++ +++.++++. ..+..+|+.+.... .+.++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~--~~~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMP--YEEEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCC--SCTTCEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCC--CCCCccCEEEE
Confidence 467899999999999999998776 6999999999 988877653 36777777653211 14578999999
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeec--------------------------cCChHHHHHHHHHhCCcEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV--------------------------RTRTGDCLHELIMSQGFRV 184 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~--------------------------~~~~~~~~~~~~~~~gf~~ 184 (218)
+.++++..+...+++.+.++|+|||.+++...... +....+.+..++.+.||.+
T Consensus 100 ~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 179 (230)
T 3cc8_A 100 GDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSI 179 (230)
T ss_dssp ESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEE
T ss_pred CChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeE
Confidence 99999988999999999999999994444332210 1123455666669999998
Q ss_pred EEE
Q 046623 185 IEL 187 (218)
Q Consensus 185 ~~~ 187 (218)
..+
T Consensus 180 ~~~ 182 (230)
T 3cc8_A 180 SKV 182 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 877
No 148
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.50 E-value=6.6e-13 Score=99.13 Aligned_cols=135 Identities=16% Similarity=0.085 Sum_probs=90.4
Q ss_pred hHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 38 SALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 38 ~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
....+.+++.... ..++.+|||+|||+|.++..+++. +. .+++++|++++.+. .++.+..+|+.+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~-----------~~~~~~~~d~~~~ 74 (180)
T 1ej0_A 6 AWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI-----------VGVDFLQGDFRDE 74 (180)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC-----------TTEEEEESCTTSH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc-----------CcEEEEEcccccc
Confidence 3344555554422 356779999999999999999766 43 69999999982111 3488888887764
Q ss_pred C----ccccccCCCCcEEEEcccccCCcch-----------HHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHh
Q 046623 115 D----LSQLSELGEFDMVIMSDVFYDPEEM-----------VGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMS 179 (218)
Q Consensus 115 ~----~~~~~~~~~~D~Iv~~~~~~~~~~~-----------~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~ 179 (218)
. .....+.++||+|+++.+++..... ..+++.+.++|+|||.+++ .........+....+ ..
T Consensus 75 ~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~--~~~~~~~~~~~~~~~-~~ 151 (180)
T 1ej0_A 75 LVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV--KVFQGEGFDEYLREI-RS 151 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE--EEESSTTHHHHHHHH-HH
T ss_pred hhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE--EEecCCcHHHHHHHH-HH
Confidence 3 0000145789999998888765544 7899999999999994433 333334455555555 54
Q ss_pred CCcEEEEE
Q 046623 180 QGFRVIEL 187 (218)
Q Consensus 180 ~gf~~~~~ 187 (218)
.|....+
T Consensus 152 -~~~~~~~ 158 (180)
T 1ej0_A 152 -LFTKVKV 158 (180)
T ss_dssp -HEEEEEE
T ss_pred -hhhhEEe
Confidence 3666555
No 149
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.50 E-value=2.6e-13 Score=108.80 Aligned_cols=101 Identities=15% Similarity=0.074 Sum_probs=75.4
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccccCCCCc
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLSELGEFD 126 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~D 126 (218)
....++.+|||+|||+|.+++.+++.+. +|+++|+|+ +++.++++...+ ++..++.+.... .....++||
T Consensus 41 l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD 112 (261)
T 3iv6_A 41 ENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFD 112 (261)
T ss_dssp TTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCS
T ss_pred cCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCcc
Confidence 3345778999999999999999998876 999999999 999999887544 122333332210 001357899
Q ss_pred EEEEcccccCC--cchHHHHHHHHHHhcCCCceE
Q 046623 127 MVIMSDVFYDP--EEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 127 ~Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG~~~ 158 (218)
+|+++.++++. ++...++..+.++| |||.++
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEE
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEE
Confidence 99999888764 45677999999999 999333
No 150
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.50 E-value=9.6e-13 Score=110.08 Aligned_cols=129 Identities=20% Similarity=0.207 Sum_probs=99.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.. ..+++++|+ + +++.+++++...++.++++++.+|+.+.. + ..||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL-----P-RKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----S-SCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC-----C-CCccEEE
Confidence 456799999999999999987664 358999999 8 99999999998888778999999986532 2 3499999
Q ss_pred EcccccCCcch--HHHHHHHHHHhcCCCceEEEEEe--ec--------------------cCChHHHHHHHHHhCCcEEE
Q 046623 130 MSDVFYDPEEM--VGLGKTLKRVCGTGRHTVVWAVS--EV--------------------RTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 130 ~~~~~~~~~~~--~~~l~~~~~lL~~gG~~~i~~~~--~~--------------------~~~~~~~~~~~~~~~gf~~~ 185 (218)
+..++++..+. ..+++.+.++|+|||.+++.-.. .. +....+.+..++.+.||.+.
T Consensus 255 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (360)
T 1tw3_A 255 LSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVE 334 (360)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEE
T ss_pred EcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEE
Confidence 99999876654 58999999999999955544322 10 11234455666689999988
Q ss_pred EE
Q 046623 186 EL 187 (218)
Q Consensus 186 ~~ 187 (218)
++
T Consensus 335 ~~ 336 (360)
T 1tw3_A 335 EV 336 (360)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 151
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.50 E-value=1.6e-12 Score=109.20 Aligned_cols=129 Identities=22% Similarity=0.164 Sum_probs=99.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.. ..+++++|+ + +++.+++++...++.++++++.+|+.+.. + ..||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL-----P-VTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----S-CCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC-----C-CCCCEEE
Confidence 456799999999999999997664 358999999 8 99999999998888778999999986522 2 2499999
Q ss_pred EcccccCCcch--HHHHHHHHHHhcCCCceEEEEE--e-ec--------------------cCChHHHHHHHHHhCCcEE
Q 046623 130 MSDVFYDPEEM--VGLGKTLKRVCGTGRHTVVWAV--S-EV--------------------RTRTGDCLHELIMSQGFRV 184 (218)
Q Consensus 130 ~~~~~~~~~~~--~~~l~~~~~lL~~gG~~~i~~~--~-~~--------------------~~~~~~~~~~~~~~~gf~~ 184 (218)
++.++++..+. ..+++.+.++|+|||.+++.-. . .. +....+.+..++.+.||.+
T Consensus 254 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 333 (374)
T 1qzz_A 254 LSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLAL 333 (374)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEE
T ss_pred EeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 99999887655 4899999999999995544322 1 10 1123445566668999998
Q ss_pred EEE
Q 046623 185 IEL 187 (218)
Q Consensus 185 ~~~ 187 (218)
.++
T Consensus 334 ~~~ 336 (374)
T 1qzz_A 334 ASE 336 (374)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 152
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.50 E-value=4.7e-15 Score=117.31 Aligned_cols=98 Identities=18% Similarity=0.195 Sum_probs=84.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|..+..+++.+ .+|+++|+++ +++.++++++.+++..+++++.+|+.+.. +.++||+|+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~D~v~~~ 151 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-----SFLKADVVFLS 151 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-----GGCCCSEEEEC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-----ccCCCCEEEEC
Confidence 67899999999999999999887 5999999999 99999999999987657999998876543 45789999999
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCc
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~ 156 (218)
+++++.......+..+.++|+|||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~L~pgG~ 176 (241)
T 3gdh_A 152 PPWGGPDYATAETFDIRTMMSPDGF 176 (241)
T ss_dssp CCCSSGGGGGSSSBCTTTSCSSCHH
T ss_pred CCcCCcchhhhHHHHHHhhcCCcce
Confidence 9998876666667778889999983
No 153
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.50 E-value=1.1e-12 Score=103.90 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=91.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++. ..+++++|+++ +++.++++.+..++..++++...|+.+... ..++||+|++
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~v~~ 164 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV----PEGIFHAAFV 164 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC----CTTCBSEEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc----CCCcccEEEE
Confidence 46789999999999999999877 55999999999 999999999988876678999888766431 3467999998
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+. .+...+++.+.++|+|||.+++.. .......+....+ .+. |.....
T Consensus 165 ~~-----~~~~~~l~~~~~~L~~gG~l~~~~--~~~~~~~~~~~~l-~~~-f~~~~~ 212 (248)
T 2yvl_A 165 DV-----REPWHYLEKVHKSLMEGAPVGFLL--PTANQVIKLLESI-ENY-FGNLEV 212 (248)
T ss_dssp CS-----SCGGGGHHHHHHHBCTTCEEEEEE--SSHHHHHHHHHHS-TTT-EEEEEE
T ss_pred CC-----cCHHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHHHHHH-Hhh-CCcceE
Confidence 43 356788999999999999443333 3223344444444 555 664443
No 154
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.50 E-value=7.6e-13 Score=109.59 Aligned_cols=126 Identities=21% Similarity=0.204 Sum_probs=98.0
Q ss_pred CeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcc
Q 046623 55 KSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSD 132 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~ 132 (218)
.+|||+|||+|..+..+++. +..+++++|+ + +++.+++++...++.++++++.+|+.+. . + ++||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~----~-~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE-V----P-SNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC-C----C-SSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC-C----C-CCCCEEEEch
Confidence 89999999999999998765 3458999999 8 9999999988776667799999998762 2 3 5799999999
Q ss_pred cccCCcchH--HHHHHHHHHhcCCCceEEEEEee---------------------ccCChHHHHHHHHHhCCcEEEEE
Q 046623 133 VFYDPEEMV--GLGKTLKRVCGTGRHTVVWAVSE---------------------VRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 133 ~~~~~~~~~--~~l~~~~~lL~~gG~~~i~~~~~---------------------~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
++++..+.. .+++.+.++|+|||.+++.-... .+....+.+..++++.||...++
T Consensus 242 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 242 IIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 998765544 99999999999999554442111 01123455566668999998877
No 155
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.49 E-value=1.4e-13 Score=109.28 Aligned_cols=145 Identities=12% Similarity=0.053 Sum_probs=99.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc--cCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS--ELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~D 126 (218)
.++.+|||+|||+|..++.+++. + ..+|+++|+++ +++.++++++..++.++++++.+|..+....... ..++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 35679999999999999999864 2 35999999999 9999999999999887899999886543211000 047899
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC--------------ChHHHHHHHHHhCCcEEEEEEccCC
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--------------RTGDCLHELIMSQGFRVIELTCQLG 192 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--------------~~~~~~~~~~~~~gf~~~~~~~~~~ 192 (218)
+|++... ......+++.+.++|+||| ++++...... ...++.+.+.....|....+|+.
T Consensus 139 ~V~~d~~---~~~~~~~l~~~~~~LkpGG--~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~-- 211 (242)
T 3r3h_A 139 FIFIDAD---KTNYLNYYELALKLVTPKG--LIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAIA-- 211 (242)
T ss_dssp EEEEESC---GGGHHHHHHHHHHHEEEEE--EEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESSS--
T ss_pred EEEEcCC---hHHhHHHHHHHHHhcCCCe--EEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEcc--
Confidence 9998654 3557789999999999999 3333322211 13445555533445666555552
Q ss_pred CCCCCceeEEEecCC
Q 046623 193 GGCPEAFAVYELIPP 207 (218)
Q Consensus 193 ~~~~~~~~l~~~~~~ 207 (218)
.++.+.+.+++
T Consensus 212 ----dG~~~~~k~~~ 222 (242)
T 3r3h_A 212 ----DGMFLVQPIAE 222 (242)
T ss_dssp ----SCEEEEEEC--
T ss_pred ----CceEEEEEcCC
Confidence 34555555444
No 156
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.49 E-value=2.5e-13 Score=111.31 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=77.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCC-----ceEEEEeecCCCCcc----ccccC
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGG-----RVEVRELVWGSDDLS----QLSEL 122 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~-----~~~~~~~d~~~~~~~----~~~~~ 122 (218)
++.+|||+|||+|.....+++.+..+|+|+|+|+ +++.|++.....+... .+++...|+...... ...+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4789999999999866666555556999999999 9999999887665321 256777776443311 01245
Q ss_pred CCCcEEEEcccccCC---cchHHHHHHHHHHhcCCCce
Q 046623 123 GEFDMVIMSDVFYDP---EEMVGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~---~~~~~~l~~~~~lL~~gG~~ 157 (218)
++||+|++..++++. .....+++.+.++|||||.+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~ 165 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKV 165 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEE
Confidence 789999998887642 45689999999999999944
No 157
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.49 E-value=1.7e-13 Score=114.46 Aligned_cols=102 Identities=23% Similarity=0.266 Sum_probs=85.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.++.+|||+|||+|.++..+++.+..+|+++|++++++.++++++.+++.++++++.+|+.+... .++||+|++.
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-----~~~~D~Ivs~ 123 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-----PEQVDIIISE 123 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCC-----SSCEEEEEEC
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCC-----CCceeEEEEe
Confidence 57889999999999999999988877999999999668899999999887789999999876542 3679999998
Q ss_pred ccccCC--cchHHHHHHHHHHhcCCCceE
Q 046623 132 DVFYDP--EEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 132 ~~~~~~--~~~~~~l~~~~~lL~~gG~~~ 158 (218)
.+.++. +.....+..+.++|+|||.++
T Consensus 124 ~~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 124 PMGYMLFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp CCBTTBTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred CchhcCChHHHHHHHHHHHhhcCCCeEEE
Confidence 776653 456677788899999999443
No 158
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=4.9e-14 Score=119.66 Aligned_cols=135 Identities=17% Similarity=0.096 Sum_probs=96.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.+++.+++.|+.+|+++|+++ +++.+++|++.+++.++++++.+|+.+..........+||+|+++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 6789999999999999999988777999999999 999999999999886568999988755322111124689999998
Q ss_pred ccccCC---------cchHHHHHHHHHHhcCCCceEEEEEeeccC--ChHHHHHHHHHhCCcEEEEE
Q 046623 132 DVFYDP---------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 132 ~~~~~~---------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--~~~~~~~~~~~~~gf~~~~~ 187 (218)
+|.+.. .....++..+.++|+|||.+++..+..... ...+.+...+.+.+..+..+
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i 363 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKML 363 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 876543 346778899999999999433333322111 12233333335566555443
No 159
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.48 E-value=3.6e-13 Score=113.04 Aligned_cols=131 Identities=18% Similarity=0.181 Sum_probs=99.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
...+|||+|||+|..+..+++. +..+++++|+ + +++.+++++...+..++++++.+|+.+... . ..++||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~--~p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV-P--FPTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC-C--CCCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC-C--CCCCcCEEEE
Confidence 5679999999999999998764 4458999999 7 999999999887776789999999876530 0 1268999999
Q ss_pred cccccCCcc--hHHHHHHHHHHhcCCCceEEEEEeec--------------------------cCChHHHHHHHHHhCCc
Q 046623 131 SDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSEV--------------------------RTRTGDCLHELIMSQGF 182 (218)
Q Consensus 131 ~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~--------------------------~~~~~~~~~~~~~~~gf 182 (218)
..++|+..+ ...+++++.+.|+|||.+++.-.... +....+.+..++++.||
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 999987654 46889999999999995555321110 11234556666688999
Q ss_pred EEEEE
Q 046623 183 RVIEL 187 (218)
Q Consensus 183 ~~~~~ 187 (218)
...++
T Consensus 335 ~~v~~ 339 (363)
T 3dp7_A 335 EVEEI 339 (363)
T ss_dssp EESCC
T ss_pred eEEEE
Confidence 88776
No 160
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.48 E-value=2e-13 Score=106.52 Aligned_cols=118 Identities=17% Similarity=0.122 Sum_probs=91.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.++..+++. +++|+++ +++.++++ ++.+..+|+..... +.++||+|++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~----~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPL----KDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCS----CTTCEEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCC----CCCCeeEEEEc
Confidence 3789999999999998887543 9999999 99888876 27788888765443 45789999999
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEEEEeec--------------------cCChHHHHHHHHHhCCcEEEEE
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV--------------------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~--------------------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.++++..+...+++.+.++|+|||.+++...... +....+.+..++.+.||.+..+
T Consensus 110 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 110 TTICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred chHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 9999988999999999999999994444432211 1123455666669999999886
No 161
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.48 E-value=3.6e-12 Score=109.42 Aligned_cols=158 Identities=17% Similarity=0.106 Sum_probs=111.0
Q ss_pred HHHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc
Q 046623 39 ALILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL 116 (218)
Q Consensus 39 ~~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (218)
+..+.+.+.. ....++.+|||+|||+|.+++.+++.+ .+|+++|+++ +++.|++|++.+++. ++.++.+|+.+...
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCS
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhh
Confidence 4444444443 223466799999999999999998874 5999999999 999999999999886 69999999876432
Q ss_pred cccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE-EccCCCCC
Q 046623 117 SQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL-TCQLGGGC 195 (218)
Q Consensus 117 ~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~-~~~~~~~~ 195 (218)
......++||+|++++|.... .++++.+.+ ++|++ +++++... .........+ .+.||.+..+ ++...+..
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~--ivyvsc~p-~tlard~~~l-~~~Gy~~~~~~~~d~Fp~t 420 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIR--IVYVSCNP-ATLARDSEAL-LKAGYTIARLAMLDMFPHT 420 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSE--EEEEESCH-HHHHHHHHHH-HHTTCEEEEEEEECCSTTS
T ss_pred hhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCe--EEEEECCh-HHHHhhHHHH-HHCCcEEEEEEEeccCCCC
Confidence 111134689999998775432 356666653 67876 55554332 2233445555 6789999986 77777777
Q ss_pred CCceeEEEecC
Q 046623 196 PEAFAVYELIP 206 (218)
Q Consensus 196 ~~~~~l~~~~~ 206 (218)
.....+..|.+
T Consensus 421 ~HvE~v~ll~r 431 (433)
T 1uwv_A 421 GHLESMVLFSR 431 (433)
T ss_dssp SCCEEEEEEEC
T ss_pred CeEEEEEEEEE
Confidence 76666665543
No 162
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.48 E-value=1.1e-13 Score=110.17 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=79.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh---CCCeEEEecCcc-hHHHHHHHHHHh---CCCCc---------------------
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL---GATRVVLTDVKP-LLPGLINNVEAN---GLGGR--------------------- 103 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~---~~~~v~~~D~~~-~~~~a~~~~~~~---~~~~~--------------------- 103 (218)
.++.+|||+|||+|.+++.+++. +..+|+++|+++ +++.+++++..+ ++.++
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 35679999999999999998765 335899999999 999999988765 43222
Q ss_pred ----eE-------------EEEeecCCCCccc-cccCCCCcEEEEcccccCCcc---------hHHHHHHHHHHhcCCCc
Q 046623 104 ----VE-------------VRELVWGSDDLSQ-LSELGEFDMVIMSDVFYDPEE---------MVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 104 ----~~-------------~~~~d~~~~~~~~-~~~~~~~D~Iv~~~~~~~~~~---------~~~~l~~~~~lL~~gG~ 156 (218)
++ +..+|+.+..... .....+||+|++++++..... ...+++.+.++|+|||.
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 8888876532100 002248999999988765432 45899999999999994
Q ss_pred eEE
Q 046623 157 TVV 159 (218)
Q Consensus 157 ~~i 159 (218)
+++
T Consensus 210 l~~ 212 (250)
T 1o9g_A 210 IAV 212 (250)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 163
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.47 E-value=1.3e-12 Score=103.02 Aligned_cols=148 Identities=13% Similarity=0.057 Sum_probs=93.8
Q ss_pred cccchhHH-HHHHHHhc----CCCCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCce
Q 046623 33 AWLWDSAL-ILAQFIST----HFDFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRV 104 (218)
Q Consensus 33 ~~~w~~~~-~l~~~l~~----~~~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~ 104 (218)
+..|+.-+ .++..+.+ ....++.+|||+|||+|..+..++.. + ..+|+++|+++ +++.+.+..+.. .++
T Consensus 51 yr~w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv 127 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNI 127 (232)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTE
T ss_pred hhhhchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCe
Confidence 44554332 34444444 22357889999999999999998754 3 45999999999 876655544433 358
Q ss_pred EEEEeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEee-------ccCChHHHHHHHH
Q 046623 105 EVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSE-------VRTRTGDCLHELI 177 (218)
Q Consensus 105 ~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~-------~~~~~~~~~~~~~ 177 (218)
.++.+|........ ...++||+|+++.+. ......+...+.+.|||||.+++.+... ......+....+
T Consensus 128 ~~i~~Da~~~~~~~-~~~~~~D~I~~d~a~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L- 203 (232)
T 3id6_C 128 FPLLADARFPQSYK-SVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKL- 203 (232)
T ss_dssp EEEECCTTCGGGTT-TTCCCEEEEEECCCC--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHH-
T ss_pred EEEEcccccchhhh-ccccceEEEEecCCC--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHH-
Confidence 88988876532111 124689999996543 2233334456666999999655553111 112234455555
Q ss_pred HhCCcEEEEE
Q 046623 178 MSQGFRVIEL 187 (218)
Q Consensus 178 ~~~gf~~~~~ 187 (218)
.+.||.+.+.
T Consensus 204 ~~~gf~~~~~ 213 (232)
T 3id6_C 204 ENSNFETIQI 213 (232)
T ss_dssp HHTTEEEEEE
T ss_pred HHCCCEEEEE
Confidence 7889998886
No 164
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.47 E-value=2.3e-13 Score=107.44 Aligned_cols=144 Identities=19% Similarity=0.170 Sum_probs=90.2
Q ss_pred hhHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEE-eecCC
Q 046623 37 DSALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRE-LVWGS 113 (218)
Q Consensus 37 ~~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~-~d~~~ 113 (218)
.+...+...+.... ..++.+|||+|||+|.++..+++.++.+|+++|+++ +++.++++... +.... .++..
T Consensus 20 rg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~------~~~~~~~~~~~ 93 (232)
T 3opn_A 20 RGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER------VVVMEQFNFRN 93 (232)
T ss_dssp TTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT------EEEECSCCGGG
T ss_pred CcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc------ccccccceEEE
Confidence 55667777776633 356779999999999999999888767999999999 98886665321 21111 11111
Q ss_pred CCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC------------------ChHHHHHH
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT------------------RTGDCLHE 175 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~------------------~~~~~~~~ 175 (218)
..... .....+|.+.+..++.+ ...++..+.++|+|||.+++++.+.... ...+.+..
T Consensus 94 ~~~~~-~~~~~~d~~~~D~v~~~---l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~ 169 (232)
T 3opn_A 94 AVLAD-FEQGRPSFTSIDVSFIS---LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLK 169 (232)
T ss_dssp CCGGG-CCSCCCSEEEECCSSSC---GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHH
T ss_pred eCHhH-cCcCCCCEEEEEEEhhh---HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHH
Confidence 10000 01123566666544433 3789999999999999655543111000 12233444
Q ss_pred HHHhCCcEEEEEEcc
Q 046623 176 LIMSQGFRVIELTCQ 190 (218)
Q Consensus 176 ~~~~~gf~~~~~~~~ 190 (218)
++.+.||.+..+...
T Consensus 170 ~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 170 TATQLGFSVKGLTFS 184 (232)
T ss_dssp HHHHHTEEEEEEEEC
T ss_pred HHHHCCCEEEEEEEc
Confidence 558899999888433
No 165
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.47 E-value=3.8e-13 Score=113.67 Aligned_cols=133 Identities=19% Similarity=0.052 Sum_probs=94.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.+++.+++. +.+|+++|+++ +++.+++|++.+++.+ +.++.+|+.+..........+||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6779999999999999999877 56999999999 9999999999999876 8999888755422111125689999998
Q ss_pred ccccCC---------cchHHHHHHHHHHhcCCCceEEEEEeeccC--ChHHHHHHHHHhCCcEEEEE
Q 046623 132 DVFYDP---------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 132 ~~~~~~---------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--~~~~~~~~~~~~~gf~~~~~ 187 (218)
+|.+.. .....++..+.++|+|||.+++..+..... ...+.+...+.+.|..+..+
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 876542 345778899999999999433333322111 12233333335666444433
No 166
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.47 E-value=6.5e-13 Score=104.69 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=81.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..++.+++.. ..+|+++|+++ +++.++++++..++.++++++.+|..+..... ..++||+|+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~~fD~V~ 147 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV--NDKVYDMIF 147 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH--TTSCEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh--ccCCccEEE
Confidence 356799999999999999998742 46999999999 99999999999988778999998876542100 257899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCC
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
++.. ......+++.+.++|+|||
T Consensus 148 ~~~~---~~~~~~~l~~~~~~LkpgG 170 (232)
T 3ntv_A 148 IDAA---KAQSKKFFEIYTPLLKHQG 170 (232)
T ss_dssp EETT---SSSHHHHHHHHGGGEEEEE
T ss_pred EcCc---HHHHHHHHHHHHHhcCCCe
Confidence 8644 4567889999999999999
No 167
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.47 E-value=7e-13 Score=104.21 Aligned_cols=106 Identities=12% Similarity=0.040 Sum_probs=81.9
Q ss_pred HHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 41 ILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 41 ~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
.+.+++.... .++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++. .++.+..+|+.+..
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~---- 96 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFR---- 96 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCC----
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcc----
Confidence 3444444322 4677999999999999999987766 999999999 999988764 34788888876643
Q ss_pred ccCCCCcEEEE-cccccCC---cchHHHHHHHHHHhcCCCceEE
Q 046623 120 SELGEFDMVIM-SDVFYDP---EEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 120 ~~~~~~D~Iv~-~~~~~~~---~~~~~~l~~~~~lL~~gG~~~i 159 (218)
..++||+|++ ..++++. ++...+++.+.++|+|||.+++
T Consensus 97 -~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (239)
T 3bxo_A 97 -LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVV 139 (239)
T ss_dssp -CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3468999995 5577765 5678899999999999994443
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.46 E-value=2.1e-13 Score=106.85 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=79.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCC-CceEEEEeecCCCCccccccCCCCcEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLG-GRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
++.+|||+|||+|..++.+++. + ..+|+++|+++ +++.++++++..++. ++++++.+|..+.... ...++||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~--~~~~~fD~V 133 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR--LANDSYQLV 133 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG--SCTTCEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH--hcCCCcCeE
Confidence 3459999999999999999864 2 35999999999 999999999999987 6899998876543221 025789999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
++... ......+++.+.++|+|||
T Consensus 134 ~~d~~---~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 134 FGQVS---PMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp EECCC---TTTHHHHHHHHHHHEEEEE
T ss_pred EEcCc---HHHHHHHHHHHHHHcCCCc
Confidence 98644 3556789999999999999
No 169
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.46 E-value=3.3e-13 Score=116.12 Aligned_cols=143 Identities=15% Similarity=0.094 Sum_probs=103.4
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
+++.+...+.- .++.+|||+|||+|..++.++.. + ..+|+++|+++ +++.+++|++..++.+ +.+...|....
T Consensus 93 ss~l~~~~L~~---~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n-v~v~~~Da~~l 168 (456)
T 3m4x_A 93 SAMIVGTAAAA---KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN-AIVTNHAPAEL 168 (456)
T ss_dssp TTHHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS-EEEECCCHHHH
T ss_pred HHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeCCHHHh
Confidence 44455555432 46789999999999999998754 3 35899999999 9999999999999864 78877665432
Q ss_pred CccccccCCCCcEEEEcccccCCc----------------------chHHHHHHHHHHhcCCCceEEEEEeeccCChHHH
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDPE----------------------EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDC 172 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~~----------------------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~ 172 (218)
.. ...++||.|++++|+.... ....+++.+.++|+|||.+++.+++.....-++.
T Consensus 169 ~~---~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~v 245 (456)
T 3m4x_A 169 VP---HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEI 245 (456)
T ss_dssp HH---HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHH
T ss_pred hh---hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHH
Confidence 21 1347899999988753211 1237889999999999955544555545556677
Q ss_pred HHHHHHhCCcEEEEE
Q 046623 173 LHELIMSQGFRVIEL 187 (218)
Q Consensus 173 ~~~~~~~~gf~~~~~ 187 (218)
+..++.+++|.+..+
T Consensus 246 v~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 246 ISWLVENYPVTIEEI 260 (456)
T ss_dssp HHHHHHHSSEEEECC
T ss_pred HHHHHHhCCCEEEec
Confidence 777778888666554
No 170
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.46 E-value=3.2e-13 Score=109.92 Aligned_cols=135 Identities=17% Similarity=0.212 Sum_probs=89.3
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHh-CCCeE--EEecCcc-hHHHHHHHHHHh-CCCCceEEE--EeecCCCCcc--c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARL-GATRV--VLTDVKP-LLPGLINNVEAN-GLGGRVEVR--ELVWGSDDLS--Q 118 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~-~~~~v--~~~D~~~-~~~~a~~~~~~~-~~~~~~~~~--~~d~~~~~~~--~ 118 (218)
.++.+|||+|||+|.++..+ +.. +..++ +++|+|+ +++.+++++... ++. ++.+. ..+..+.... .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecchhhhhhhhcc
Confidence 35679999999999766533 222 23344 9999999 999999887653 332 34443 2222111000 0
Q ss_pred cccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeec--------------------cCChHHHHHHHHH
Q 046623 119 LSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV--------------------RTRTGDCLHELIM 178 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~--------------------~~~~~~~~~~~~~ 178 (218)
..+.++||+|+++.++++.+++.+.++++.++|||||.+++...... +....+.+..++.
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 01357899999999999999999999999999999995555433210 0112334555568
Q ss_pred hCCcEEEEE
Q 046623 179 SQGFRVIEL 187 (218)
Q Consensus 179 ~~gf~~~~~ 187 (218)
+.||.+...
T Consensus 210 ~aGf~~~~~ 218 (292)
T 2aot_A 210 NLGLKYECY 218 (292)
T ss_dssp HHTCCEEEE
T ss_pred HCCCceEEE
Confidence 899987764
No 171
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.46 E-value=1.6e-12 Score=101.06 Aligned_cols=128 Identities=11% Similarity=0.090 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.. ..+|+++|+++ +++.+.+..+.. .++.++.+|....... ....++||+|+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~-~~~~~~fD~V~ 131 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKY-SGIVEKVDLIY 131 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGT-TTTCCCEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhh-cccccceeEEE
Confidence 467899999999999999887653 35899999999 887766665543 3477777776553110 01237899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEee---ccCChHHHH----HHHHHhCCcEEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSE---VRTRTGDCL----HELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~---~~~~~~~~~----~~~~~~~gf~~~~~ 187 (218)
++-. .......+++++.++|||||.+++..... .+...++.+ +.+ ++. |.+.+.
T Consensus 132 ~~~~--~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~-f~~~~~ 192 (210)
T 1nt2_A 132 QDIA--QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEM-EGD-FKIVKH 192 (210)
T ss_dssp ECCC--STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHH-HTT-SEEEEE
T ss_pred Eecc--ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHH-Hhh-cEEeee
Confidence 9632 22344556899999999999555543211 122234433 233 777 988776
No 172
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=3.8e-13 Score=105.09 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=80.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccccc---CCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSE---LGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~ 125 (218)
.++.+|||+|||+|..++.+++. + ..+|+++|+++ +++.++++++..++.++++++.+|..+.... ... .++|
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~f 141 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAE-LIHAGQAWQY 141 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH-HHTTTCTTCE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHH-hhhccCCCCc
Confidence 35679999999999999999865 2 46999999999 9999999999999887899999887543211 101 1789
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
|+|+++.+ ......+++.+.++|+|||
T Consensus 142 D~v~~~~~---~~~~~~~l~~~~~~L~pgG 168 (225)
T 3tr6_A 142 DLIYIDAD---KANTDLYYEESLKLLREGG 168 (225)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEE
T ss_pred cEEEECCC---HHHHHHHHHHHHHhcCCCc
Confidence 99998654 3557889999999999999
No 173
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.46 E-value=3.9e-13 Score=115.79 Aligned_cols=142 Identities=19% Similarity=0.179 Sum_probs=102.4
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
+++.+..++.- .++.+|||+|||+|..+..++.. + ..+|+++|+++ +++.+++|++..++. +.+...|....
T Consensus 89 ss~l~a~~L~~---~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l 163 (464)
T 3m6w_A 89 SAQAVGVLLDP---KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRAL 163 (464)
T ss_dssp TTHHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHH
T ss_pred HHHHHHHhcCc---CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHh
Confidence 44455555432 46789999999999999999754 2 35899999999 999999999999976 78887765433
Q ss_pred CccccccCCCCcEEEEcccccCC------cc----------------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHH
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDP------EE----------------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDC 172 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~------~~----------------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~ 172 (218)
.. ...++||+|++++|+... ++ ...+++.+.++|+|||.+++.+++.....-++.
T Consensus 164 ~~---~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~v 240 (464)
T 3m6w_A 164 AE---AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGV 240 (464)
T ss_dssp HH---HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHH
T ss_pred hh---hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHH
Confidence 21 135789999998776321 11 277899999999999955544555545556667
Q ss_pred HHHHHHhC-CcEEEEE
Q 046623 173 LHELIMSQ-GFRVIEL 187 (218)
Q Consensus 173 ~~~~~~~~-gf~~~~~ 187 (218)
+.+++.++ +|.+..+
T Consensus 241 v~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 241 VAHFLKAHPEFRLEDA 256 (464)
T ss_dssp HHHHHHHCTTEEEECC
T ss_pred HHHHHHHCCCcEEEec
Confidence 77776666 5766554
No 174
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.46 E-value=1.5e-13 Score=116.37 Aligned_cols=104 Identities=20% Similarity=0.096 Sum_probs=80.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|.+++.+++.|+ +|+++|+|+ +++.+++|++.+++.. .+..+|+.+.... ..+.||+|+++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~---~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRG---LEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHT---CCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHH---hcCCCCEEEEC
Confidence 488999999999999999998877 599999999 9999999999999863 4556665433210 13449999998
Q ss_pred ccccCC---------cchHHHHHHHHHHhcCCCceEEEEE
Q 046623 132 DVFYDP---------EEMVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 132 ~~~~~~---------~~~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
+|.+.. .....++..+.++|+|||.+++..+
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 886442 2456888999999999994433333
No 175
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.46 E-value=1.3e-12 Score=112.04 Aligned_cols=141 Identities=13% Similarity=0.127 Sum_probs=98.5
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
+++.+...+.. .++.+|||+|||+|..+..++.... .+++++|+++ +++.+++|++.+++. +.+..+|.....
T Consensus 234 ~s~~~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~~ 308 (429)
T 1sqg_A 234 SAQGCMTWLAP---QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPS 308 (429)
T ss_dssp HHHTHHHHHCC---CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCTH
T ss_pred HHHHHHHHcCC---CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhch
Confidence 44444444432 4678999999999999999987643 6999999999 999999999998864 788888876543
Q ss_pred ccccccCCCCcEEEEcccccCC------cc----------------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHH
Q 046623 116 LSQLSELGEFDMVIMSDVFYDP------EE----------------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCL 173 (218)
Q Consensus 116 ~~~~~~~~~~D~Iv~~~~~~~~------~~----------------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~ 173 (218)
. ..+.++||+|++++|+... ++ ...+++.+.++|+|||.+++..++......++.+
T Consensus 309 ~--~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v 386 (429)
T 1sqg_A 309 Q--WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQI 386 (429)
T ss_dssp H--HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHH
T ss_pred h--hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHH
Confidence 1 1134689999998776431 11 1478899999999999544444444333344555
Q ss_pred HHHHHhC-CcEEE
Q 046623 174 HELIMSQ-GFRVI 185 (218)
Q Consensus 174 ~~~~~~~-gf~~~ 185 (218)
..++.++ +|...
T Consensus 387 ~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 387 KAFLQRTADAELC 399 (429)
T ss_dssp HHHHHHCTTCEEC
T ss_pred HHHHHhCCCCEEe
Confidence 5554544 56654
No 176
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.45 E-value=8.4e-13 Score=106.55 Aligned_cols=124 Identities=20% Similarity=0.198 Sum_probs=92.2
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHh-C-CCCceEEEEeecCCCCccccccCCCC
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEAN-G-LGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~-~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
..++.+|||+|||+|.++..+++. + ..+++++|+++ +++.++++++.+ + ...++.+..+|+.+... +.++|
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~----~~~~~ 172 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL----PDGSV 172 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC----CTTCE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC----CCCce
Confidence 356789999999999999999864 3 45999999999 999999999887 4 34568999888765532 45689
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHh-CCcEEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMS-QGFRVIE 186 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~-~gf~~~~ 186 (218)
|+|+++. .+...+++.+.++|+|||.++++. .......+....+ .+ .+|...+
T Consensus 173 D~v~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~--~~~~~~~~~~~~l-~~~~~f~~~~ 226 (280)
T 1i9g_A 173 DRAVLDM-----LAPWEVLDAVSRLLVAGGVLMVYV--ATVTQLSRIVEAL-RAKQCWTEPR 226 (280)
T ss_dssp EEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEE--SSHHHHHHHHHHH-HHHSSBCCCE
T ss_pred eEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEe--CCHHHHHHHHHHH-HhcCCcCCcE
Confidence 9999843 355689999999999999444433 3223445555555 54 6776443
No 177
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=6.1e-13 Score=103.21 Aligned_cols=114 Identities=17% Similarity=0.071 Sum_probs=84.6
Q ss_pred chhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCC--CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecC
Q 046623 36 WDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGA--TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWG 112 (218)
Q Consensus 36 w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~--~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~ 112 (218)
|.........+......++.+|||+|||+|..+..+++... .+++++|+++ +++.+++++...+..+ +.+..+|..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~ 138 (215)
T 2yxe_A 60 ISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGDGT 138 (215)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESCGG
T ss_pred eCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECCcc
Confidence 33333343343334445778999999999999999876642 5999999999 9999999998887654 888888764
Q ss_pred CCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 113 SDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 113 ~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.... ..++||+|+++.++++.. +.+.++|+|||.+++.
T Consensus 139 ~~~~----~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 139 LGYE----PLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp GCCG----GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEE
T ss_pred cCCC----CCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEE
Confidence 3221 356899999998887643 4788999999944444
No 178
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.45 E-value=1.8e-11 Score=104.65 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=102.7
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL 116 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (218)
....+.+++.. ..++.+|||+|||+|.+++.+++.+ .+|+++|+++ +++.|++|++.+++. ++++.+|+.+...
T Consensus 277 ~~e~l~~~~~~--~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~ 351 (425)
T 2jjq_A 277 QAVNLVRKVSE--LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV 351 (425)
T ss_dssp HHHHHHHHHHH--HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC
T ss_pred HHHHHHHHhhc--cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc
Confidence 34455555543 2467799999999999999998875 4999999999 999999999999876 8999998876532
Q ss_pred cccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE-EccCCCCC
Q 046623 117 SQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL-TCQLGGGC 195 (218)
Q Consensus 117 ~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~-~~~~~~~~ 195 (218)
.+||+|++++|.. .....+++.+. .++|+| +++++... ......+..+ .|.+..+ ++...|..
T Consensus 352 ------~~fD~Vv~dPPr~--g~~~~~~~~l~-~l~p~g--ivyvsc~p-~tlarDl~~l----~y~l~~~~~~DmFP~T 415 (425)
T 2jjq_A 352 ------KGFDTVIVDPPRA--GLHPRLVKRLN-REKPGV--IVYVSCNP-ETFARDVKML----DYRIDEIVALDMFPHT 415 (425)
T ss_dssp ------TTCSEEEECCCTT--CSCHHHHHHHH-HHCCSE--EEEEESCH-HHHHHHHHHS----SCCEEEEEEECCSTTS
T ss_pred ------cCCCEEEEcCCcc--chHHHHHHHHH-hcCCCc--EEEEECCh-HHHHhHHhhC----eEEEEEEEEECcCCCC
Confidence 2799999977742 23345666665 589999 44444321 1222233333 2777777 77777776
Q ss_pred CCceeEEEe
Q 046623 196 PEAFAVYEL 204 (218)
Q Consensus 196 ~~~~~l~~~ 204 (218)
.....+..|
T Consensus 416 ~HvE~v~ll 424 (425)
T 2jjq_A 416 PHVELVAKL 424 (425)
T ss_dssp SCCEEEEEE
T ss_pred ceEEEEEEE
Confidence 666555443
No 179
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.45 E-value=3.1e-13 Score=113.98 Aligned_cols=104 Identities=11% Similarity=0.036 Sum_probs=80.9
Q ss_pred CCCCCeEEEECCCCCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHH-------HHhCC-CCceEEEEeecCCCCccccc
Q 046623 51 DFQNKSVLELGAGAGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNV-------EANGL-GGRVEVRELVWGSDDLSQLS 120 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~-------~~~~~-~~~~~~~~~d~~~~~~~~~~ 120 (218)
..++.+|||||||+|.+++.++. .+..+++|+|+++ +++.|+++. +.+++ ..+++++.+|+.+.....
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d-- 248 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE-- 248 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc--
Confidence 35788999999999999999875 4655699999999 998888765 34455 257999999987654311
Q ss_pred cCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCce
Q 046623 121 ELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~ 157 (218)
....+|+|+++++++ .++....+.++.+.|||||.+
T Consensus 249 ~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrI 284 (438)
T 3uwp_A 249 RIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRI 284 (438)
T ss_dssp HHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEE
T ss_pred ccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEE
Confidence 114799999987765 467778888899999999933
No 180
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.44 E-value=7.3e-13 Score=103.90 Aligned_cols=111 Identities=12% Similarity=-0.016 Sum_probs=84.0
Q ss_pred chhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 36 WDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 36 w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
|.....+...+......++.+|||+|||+|.++..++..+ .+++++|+++ +++.++++....+ ++.++.+|+...
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~ 128 (231)
T 1vbf_A 53 TTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLG 128 (231)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGC
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccc
Confidence 3343334444333334567899999999999999998887 5999999999 9999999987665 588998887653
Q ss_pred CccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.. ..++||+|+++.++++.. +.+.++|+|||.+++.
T Consensus 129 ~~----~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 129 YE----EEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILP 164 (231)
T ss_dssp CG----GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEE
T ss_pred cc----cCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEE
Confidence 22 357899999998887643 4688899999944444
No 181
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.44 E-value=7.4e-13 Score=105.48 Aligned_cols=103 Identities=15% Similarity=0.196 Sum_probs=81.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc---cCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS---ELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~~ 125 (218)
.++.+|||+|||+|..++.+++. + ..+++++|+++ +++.++++++..++.++++++.+|..+....... ..++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 35679999999999999999865 2 35999999999 9999999999988877799998876543211000 14789
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCce
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~ 157 (218)
|+|++... ......+++.+.++|+|||.+
T Consensus 158 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~l 186 (247)
T 1sui_A 158 DFIFVDAD---KDNYLNYHKRLIDLVKVGGVI 186 (247)
T ss_dssp SEEEECSC---STTHHHHHHHHHHHBCTTCCE
T ss_pred EEEEEcCc---hHHHHHHHHHHHHhCCCCeEE
Confidence 99998644 356789999999999999933
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.43 E-value=9.1e-13 Score=112.52 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=83.3
Q ss_pred HHHHHhcCCCCCCCeEEEECCCCCHHHHHHHH-hCCCeEEEecCcc-hHHHH-------HHHHHHhCCC-CceEEEEeec
Q 046623 42 LAQFISTHFDFQNKSVLELGAGAGLPGLTAAR-LGATRVVLTDVKP-LLPGL-------INNVEANGLG-GRVEVRELVW 111 (218)
Q Consensus 42 l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a-------~~~~~~~~~~-~~~~~~~~d~ 111 (218)
+..++......++.+|||+|||+|.+++.+++ .+..+|+++|+++ +++.| +++++..++. .+++++.+|.
T Consensus 231 v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 231 LSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 34444333345788999999999999999986 4666899999999 99888 8888888753 5688887643
Q ss_pred CCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCc
Q 046623 112 GSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 112 ~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~ 156 (218)
...........++||+|+++..++ .++....+..+.+.|+|||.
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpGG~ 354 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGCK 354 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTCE
T ss_pred cccccccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCCeE
Confidence 221100000236799999976664 36777888999999999993
No 183
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.43 E-value=2.3e-13 Score=118.15 Aligned_cols=102 Identities=22% Similarity=0.244 Sum_probs=84.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.++.+|||+|||+|.+++.+++.+..+|+++|++++++.|+++++.+++.++++++.+|+.+.. ..++||+|+++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-----~~~~fD~Ivs~ 231 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-----LPEQVDIIISE 231 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC-----CSSCEEEEECC
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc-----cCCCeEEEEEe
Confidence 5678999999999999999988877799999999877889999999998778999999987643 23589999998
Q ss_pred ccccCC--cchHHHHHHHHHHhcCCCceE
Q 046623 132 DVFYDP--EEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 132 ~~~~~~--~~~~~~l~~~~~lL~~gG~~~ 158 (218)
.+.++. +.....+..+.++|+|||.++
T Consensus 232 ~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 232 PMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp CCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred CchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 776543 445667777889999999443
No 184
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.43 E-value=8.6e-13 Score=111.04 Aligned_cols=153 Identities=14% Similarity=0.077 Sum_probs=103.8
Q ss_pred HHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc
Q 046623 40 LILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 40 ~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (218)
..+..++.......+.+|||+|||+|.+++.+++. ..+|+++|+++ +++.+++|++.+++. +++++.+|..+....
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~- 276 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQA- 276 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHH-
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHH-
Confidence 44555554422234678999999999999998875 45999999999 999999999999884 589998887543210
Q ss_pred ccc-------------CCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 119 LSE-------------LGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 119 ~~~-------------~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
... ..+||+|++++|... +...+.++|+++|.++++.+.+ ......+..+ .. ++.+.
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g------~~~~~~~~l~~~g~ivyvsc~p--~t~ard~~~l-~~-~y~~~ 346 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSG------LDSETEKMVQAYPRILYISCNP--ETLCKNLETL-SQ-THKVE 346 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTC------CCHHHHHHHTTSSEEEEEESCH--HHHHHHHHHH-HH-HEEEE
T ss_pred HhhccccccccccccccCCCCEEEECcCccc------cHHHHHHHHhCCCEEEEEECCH--HHHHHHHHHH-hh-CcEEE
Confidence 001 137999999777431 2344566677888444444332 2334445555 33 68888
Q ss_pred EE-EccCCCCCCCceeEEEec
Q 046623 186 EL-TCQLGGGCPEAFAVYELI 205 (218)
Q Consensus 186 ~~-~~~~~~~~~~~~~l~~~~ 205 (218)
.+ ++...|.......+..|.
T Consensus 347 ~~~~~D~FP~T~HvE~v~ll~ 367 (369)
T 3bt7_A 347 RLALFDQFPYTHHMQCGVLLT 367 (369)
T ss_dssp EEEEECCSTTSSCCEEEEEEE
T ss_pred EEEeeccCCCCCcEEEEEEEE
Confidence 87 787888777766665554
No 185
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.42 E-value=3.4e-13 Score=110.77 Aligned_cols=106 Identities=17% Similarity=0.056 Sum_probs=82.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC------CCCceEEEEeecCCCCccc-cc-cCC
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG------LGGRVEVRELVWGSDDLSQ-LS-ELG 123 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~------~~~~~~~~~~d~~~~~~~~-~~-~~~ 123 (218)
++.+|||+|||+|..+..+++.+..+++++|+++ +++.++++....+ ...++.++.+|+....... .. +.+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5679999999999999998876667999999999 9999999887642 1235899999987654211 11 235
Q ss_pred CCcEEEEcccccCC----cchHHHHHHHHHHhcCCCceE
Q 046623 124 EFDMVIMSDVFYDP----EEMVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~----~~~~~~l~~~~~lL~~gG~~~ 158 (218)
+||+|+++.++++. ++...++..+.++|+|||.++
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFI 152 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEE
Confidence 89999999988765 446799999999999999433
No 186
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.42 E-value=7.5e-13 Score=109.12 Aligned_cols=101 Identities=19% Similarity=0.087 Sum_probs=81.4
Q ss_pred CCCCCCCeEEEECCCCCHHHHHHHHhCC--CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCC
Q 046623 49 HFDFQNKSVLELGAGAGLPGLTAARLGA--TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 49 ~~~~~~~~vLDlG~G~G~~~~~l~~~~~--~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
....++.+|||+|||+|.++..+++.+. .+|+++|+++ +++.++++++..+..+ +++..+|..+... ..++|
T Consensus 71 l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~----~~~~f 145 (317)
T 1dl5_A 71 VGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVP----EFSPY 145 (317)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCG----GGCCE
T ss_pred cCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccc----cCCCe
Confidence 3345788999999999999999986643 4699999999 9999999999888765 8999888765432 35789
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+|++..++++.. +.+.++|+|||.+++.
T Consensus 146 D~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 146 DVIFVTVGVDEVP------ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEEEECSBBSCCC------HHHHHHEEEEEEEEEE
T ss_pred EEEEEcCCHHHHH------HHHHHhcCCCcEEEEE
Confidence 9999998887654 5678899999954444
No 187
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.42 E-value=2e-13 Score=116.52 Aligned_cols=129 Identities=10% Similarity=0.115 Sum_probs=92.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc-ccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL-SELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.++..+++.+. +++++|+++ +++.++++ +.. .....+........ .+.++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~----~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIR----VRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCC----EECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCC----cceeeechhhHhhcccCCCCEEEEE
Confidence 4678999999999999999988876 999999999 99888765 322 22111111111001 1357899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEEEee----------------ccCChHHHHHHHHHhCCcEEEEEEc
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSE----------------VRTRTGDCLHELIMSQGFRVIELTC 189 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~----------------~~~~~~~~~~~~~~~~gf~~~~~~~ 189 (218)
++.++++..++..+++.+.++|+|||.+++..... ......+.+..++++.||.+..+..
T Consensus 177 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 177 AANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred ECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 99999999999999999999999999444432210 0112345566666999999988843
No 188
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.42 E-value=7.8e-13 Score=105.78 Aligned_cols=97 Identities=22% Similarity=0.137 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+|||+|||+|..+..+++.+. +++++|+++ +++.++++.. . .+..+|+.+... +.++||+|++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~----~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPF----PSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCS----CTTCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCC----CCCCEEEEEEc
Confidence 678999999999999999988765 899999999 9999887743 1 267777765443 56789999997
Q ss_pred cccc-CCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 132 DVFY-DPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 132 ~~~~-~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
.++. ...+...+++.+.++|+|||.+++..
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 6554 34679999999999999999444433
No 189
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.41 E-value=5.8e-13 Score=109.25 Aligned_cols=149 Identities=13% Similarity=-0.014 Sum_probs=95.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHH---hCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEA---NGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
.++.+|||+|||+|..+..+++. +..+++++|+++ +++.+++++.. .....+++++.+|....... ...++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~--~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ--TPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS--SCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh--ccCCcee
Confidence 35679999999999999999876 346999999999 99999988743 11235689998876543210 0256899
Q ss_pred EEEEcccccCCcc----hHHHHHHHHHHhcCCCceEEEEEeecc--CChHHHHHHHHHhCCcEEEEE---EccCCCCCCC
Q 046623 127 MVIMSDVFYDPEE----MVGLGKTLKRVCGTGRHTVVWAVSEVR--TRTGDCLHELIMSQGFRVIEL---TCQLGGGCPE 197 (218)
Q Consensus 127 ~Iv~~~~~~~~~~----~~~~l~~~~~lL~~gG~~~i~~~~~~~--~~~~~~~~~~~~~~gf~~~~~---~~~~~~~~~~ 197 (218)
+|+++.+...... ..++++.+.++|+|||.+++....... ....+..+.+ ++.||..... ++...++...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l-~~~GF~~v~~~~~~vP~yp~g~w 250 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFI-RETGFASVQYALMHVPTYPCGSI 250 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHH-HHHTCSEEEEEECCCTTSTTSCC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHH-HhCCCCcEEEEEeecccccCcce
Confidence 9999655433211 168999999999999944443322111 1233334444 8889987665 2333334444
Q ss_pred ceeEEE
Q 046623 198 AFAVYE 203 (218)
Q Consensus 198 ~~~l~~ 203 (218)
.+.+..
T Consensus 251 ~f~~as 256 (304)
T 3bwc_A 251 GTLVCS 256 (304)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 444433
No 190
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.41 E-value=1.6e-12 Score=112.04 Aligned_cols=133 Identities=16% Similarity=0.114 Sum_probs=96.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|..+..++.. +. .+++++|+++ +++.+++|++..++. ++.+..+|....... ...++||+|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~--~~~~~fD~V 334 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEI--IGEEVADKV 334 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSS--SCSSCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchh--hccCCCCEE
Confidence 46789999999999999998764 33 5899999999 999999999998875 488888887654310 123679999
Q ss_pred EEcccccCC------cc----------------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhC-CcEEE
Q 046623 129 IMSDVFYDP------EE----------------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQ-GFRVI 185 (218)
Q Consensus 129 v~~~~~~~~------~~----------------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~-gf~~~ 185 (218)
+++.|+... ++ ...+++.+.++|+|||.+++..++.....-++.+..++.++ +|...
T Consensus 335 l~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~ 414 (450)
T 2yxl_A 335 LLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLV 414 (450)
T ss_dssp EEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEEC
T ss_pred EEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEe
Confidence 997776432 11 15789999999999995554444443333445566655665 67765
Q ss_pred EE
Q 046623 186 EL 187 (218)
Q Consensus 186 ~~ 187 (218)
.+
T Consensus 415 ~~ 416 (450)
T 2yxl_A 415 PL 416 (450)
T ss_dssp CC
T ss_pred ec
Confidence 44
No 191
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=4.8e-12 Score=96.93 Aligned_cols=149 Identities=13% Similarity=0.118 Sum_probs=94.2
Q ss_pred hhHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 37 DSALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 37 ~~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
.+.+.|.+.+.+.. ..++.+|||+|||+|.++..+++. ..+|+++|+++ .. . .++.++.+|+.+.
T Consensus 8 Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~-----------~-~~v~~~~~D~~~~ 74 (191)
T 3dou_A 8 RAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEE-----------I-AGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCC-----------C-TTCEEEECCTTSS
T ss_pred cHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccccc-----------C-CCeEEEEccccCH
Confidence 45667777766533 246789999999999999999877 45999999998 31 1 3489999998775
Q ss_pred Ccccc----cc---CCCCcEEEEcccccCC-----------cchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHH
Q 046623 115 DLSQL----SE---LGEFDMVIMSDVFYDP-----------EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 115 ~~~~~----~~---~~~~D~Iv~~~~~~~~-----------~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~ 176 (218)
..... .. .++||+|+++.+.... .....+++.+.++|+|||.+++.+... ....++...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~--~~~~~~~~~l 152 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG--DMTNDFIAIW 152 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS--THHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC--CCHHHHHHHH
Confidence 42110 01 1489999996543221 123567888899999999555444422 3333444444
Q ss_pred HHhCCcEEEEE--EccCCCCCCCceeEE
Q 046623 177 IMSQGFRVIEL--TCQLGGGCPEAFAVY 202 (218)
Q Consensus 177 ~~~~gf~~~~~--~~~~~~~~~~~~~l~ 202 (218)
+..|.-..+ |...++...+.+.+.
T Consensus 153 --~~~F~~v~~~kP~asR~~s~E~y~v~ 178 (191)
T 3dou_A 153 --RKNFSSYKISKPPASRGSSSEIYIMF 178 (191)
T ss_dssp --GGGEEEEEEECC------CCEEEEEE
T ss_pred --HHhcCEEEEECCCCccCCCceEEEEE
Confidence 446776665 666665666655553
No 192
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.41 E-value=8.4e-13 Score=103.88 Aligned_cols=101 Identities=16% Similarity=0.115 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.. ..+|+++|+++ +++.++++++..+..+++.++.+|..+.... ....++||+|+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~fD~I~ 131 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK-LELYPLFDVLF 131 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH-HTTSCCEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh-cccCCCccEEE
Confidence 356799999999999999998663 45999999999 9999999999988877799998887653211 00146899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCc
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~ 156 (218)
++.+. .....+++.+.++|+|||.
T Consensus 132 ~~~~~---~~~~~~l~~~~~~L~pgG~ 155 (233)
T 2gpy_A 132 IDAAK---GQYRRFFDMYSPMVRPGGL 155 (233)
T ss_dssp EEGGG---SCHHHHHHHHGGGEEEEEE
T ss_pred ECCCH---HHHHHHHHHHHHHcCCCeE
Confidence 97664 3678899999999999993
No 193
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.40 E-value=6.2e-12 Score=105.18 Aligned_cols=146 Identities=20% Similarity=0.224 Sum_probs=104.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.+..+|||+|||+|..+..+++. +..+++..|..+.++.++++.+..+ .++++++.+|+.... ...+|++++
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~------~~~~D~~~~ 250 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP------LPEADLYIL 250 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC---CCSEEEEESCTTTSC------CCCCSEEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc-cCceeeecCccccCC------CCCceEEEe
Confidence 34579999999999999998755 4467888887558888888775544 467999999987643 345899999
Q ss_pred cccccCCcch--HHHHHHHHHHhcCCCceEEEEEee----------------------ccCChHHHHHHHHHhCCcEEEE
Q 046623 131 SDVFYDPEEM--VGLGKTLKRVCGTGRHTVVWAVSE----------------------VRTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 131 ~~~~~~~~~~--~~~l~~~~~lL~~gG~~~i~~~~~----------------------~~~~~~~~~~~~~~~~gf~~~~ 186 (218)
..++|++++. ..+++++++.|+|||+++|+-... .+....+.+..++++.||...+
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 9999987654 678999999999999665552111 1122345566777999999988
Q ss_pred EEccCCCCCCCceeEEEecCCcc
Q 046623 187 LTCQLGGGCPEAFAVYELIPPMH 209 (218)
Q Consensus 187 ~~~~~~~~~~~~~~l~~~~~~~~ 209 (218)
+... + ....+..-+|.+|
T Consensus 331 v~~~---~--~~~~~i~ArKgt~ 348 (353)
T 4a6d_A 331 FKKT---G--AIYDAILARKGTH 348 (353)
T ss_dssp EECC---S--SSCEEEEEECCCC
T ss_pred EEEc---C--CceEEEEEEecCc
Confidence 7321 1 2345555666655
No 194
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.40 E-value=8e-12 Score=97.79 Aligned_cols=128 Identities=19% Similarity=0.145 Sum_probs=89.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++.+|||+|||+|.++..+++. +. .+|+++|+++ +++.++++++.+ .+++++.+|+.+..... ...++||+|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~-~~~~~~D~v 147 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYR-ALVPKVDVI 147 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGT-TTCCCEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhh-cccCCceEE
Confidence 46789999999999999999855 42 5999999999 999999888655 45899998887632100 123589999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCC-------hHHHHHHHHHhCCcEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTR-------TGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~-------~~~~~~~~~~~~gf~~~~~ 187 (218)
+++.+ .......++..+.++|+|||.+++......... ..+.+..+ .+. |.+...
T Consensus 148 ~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~ 209 (227)
T 1g8a_A 148 FEDVA--QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIER 209 (227)
T ss_dssp EECCC--STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEE
T ss_pred EECCC--CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeE
Confidence 98655 223344569999999999995555522211111 12344555 566 888765
No 195
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=4.1e-12 Score=99.44 Aligned_cols=132 Identities=15% Similarity=0.074 Sum_probs=94.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccC---CCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSEL---GEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~ 125 (218)
.++.+|||+|||+|..++.+++. + ..+++++|+++ +++.++++++..+...+++++.+|..+... ..... ++|
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~-~~~~~~~~~~~ 146 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLD-ELLAAGEAGTF 146 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH-HHHHTTCTTCE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHH-HHHhcCCCCCc
Confidence 45679999999999999999865 2 45999999999 999999999998887779999887643311 11111 689
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC--------------ChHHHHHHHHHhCCcEEEEEEc
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--------------RTGDCLHELIMSQGFRVIELTC 189 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--------------~~~~~~~~~~~~~gf~~~~~~~ 189 (218)
|+|+++.+ ......+++.+.++|+||| .+++...... ...++.+.+.....+....+|+
T Consensus 147 D~v~~d~~---~~~~~~~l~~~~~~L~pgG--~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 219 (229)
T 2avd_A 147 DVAVVDAD---KENCSAYYERCLQLLRPGG--ILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL 219 (229)
T ss_dssp EEEEECSC---STTHHHHHHHHHHHEEEEE--EEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred cEEEECCC---HHHHHHHHHHHHHHcCCCe--EEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec
Confidence 99999655 3567889999999999999 3333222110 1234555553455676666655
No 196
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.40 E-value=2.4e-12 Score=104.99 Aligned_cols=145 Identities=15% Similarity=0.030 Sum_probs=93.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhC----CCCceEEEEeecCCCCccccccCCCCc
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANG----LGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
++.+|||||||+|..+..+++. +..+|+++|+++ +++.+++++...+ -..+++++.+|....... ..++||
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~---~~~~fD 159 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---TSQTFD 159 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C---CCCCEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh---cCCCcc
Confidence 4679999999999999999876 456899999999 9999999987652 124689999887654321 357899
Q ss_pred EEEEcccccC--Ccc--hHHHHHHHHHHhcCCCceEEEEEeecc--CChHHHHHHHHHhCCcEEEEE---EccCCCCCCC
Q 046623 127 MVIMSDVFYD--PEE--MVGLGKTLKRVCGTGRHTVVWAVSEVR--TRTGDCLHELIMSQGFRVIEL---TCQLGGGCPE 197 (218)
Q Consensus 127 ~Iv~~~~~~~--~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~~--~~~~~~~~~~~~~~gf~~~~~---~~~~~~~~~~ 197 (218)
+|+++.+... ... ..++++.+.++|+|||.+++....... .........+ ++. |..... ++...++...
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l-~~~-F~~v~~~~~~vp~~p~g~~ 237 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKL-SHY-FSDVGFYQAAIPTYYGGIM 237 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHH-HHH-CSEEEEEEEECTTSSSSEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHH-HHH-CCCeEEEEEEecccCCCce
Confidence 9999543221 111 278999999999999955444433221 1233444444 433 554443 4445444444
Q ss_pred ceeEE
Q 046623 198 AFAVY 202 (218)
Q Consensus 198 ~~~l~ 202 (218)
.+.+-
T Consensus 238 ~f~~a 242 (294)
T 3adn_A 238 TFAWA 242 (294)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 197
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.40 E-value=3.9e-12 Score=97.64 Aligned_cols=116 Identities=19% Similarity=0.211 Sum_probs=81.3
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|.++..+++.+..+++++|+++ +++.+++++. +++++.+|+.+. + ++||+|+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~------~-~~~D~v~ 115 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI------S-GKYDTWI 115 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC------C-CCEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC------C-CCeeEEE
Confidence 346789999999999999999887766899999999 9999998864 488888887652 2 6899999
Q ss_pred EcccccCCcc--hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 130 MSDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 130 ~~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
+++|+++... ...+++.+.+.+ |. ++.+... .....+...+...| .+..+
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~---g~-~~~~~~~---~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS---MW-IYSIGNA---KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE---EE-EEEEEEG---GGHHHHHHHHHHHE-EEEEE
T ss_pred ECCCchhccCchhHHHHHHHHHhc---Cc-EEEEEcC---chHHHHHHHHHHCC-CEEEE
Confidence 9999877532 356788888877 42 3333322 22334444446666 55544
No 198
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.39 E-value=3e-12 Score=110.98 Aligned_cols=125 Identities=10% Similarity=0.053 Sum_probs=92.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
++.+|||+|||+|..+..++.. + ..+|+++|+++ +++.+++|++..++. ++.++..|...... ...++||.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~---~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGA---AVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHH---HSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhh---hccccCCEEE
Confidence 6789999999999999999765 2 35899999999 999999999999875 48888887655321 0246899999
Q ss_pred EcccccCC------cc----------------hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCC
Q 046623 130 MSDVFYDP------EE----------------MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQG 181 (218)
Q Consensus 130 ~~~~~~~~------~~----------------~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~g 181 (218)
+++|+... ++ ...+++.+.++|||||.+++.+++.....-++.+..++.+++
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 98776321 11 246889999999999955544444444445556666666665
No 199
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.39 E-value=1.9e-11 Score=110.49 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=82.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC--CeEEEecCcc-hHHHHHHHHHHh------CCCCceEEEEeecCCCCccccccC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGA--TRVVLTDVKP-LLPGLINNVEAN------GLGGRVEVRELVWGSDDLSQLSEL 122 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~--~~v~~~D~~~-~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~ 122 (218)
.++.+|||+|||+|.++..+++.+. .+|+++|+++ +++.|++++... +. .+++++.+|+.+... ..
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~----~d 794 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDS----RL 794 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCT----TS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCc----cc
Confidence 4678999999999999999988763 5999999999 999999877543 33 358999999887654 56
Q ss_pred CCCcEEEEcccccCCcchH--HHHHHHHHHhcCC
Q 046623 123 GEFDMVIMSDVFYDPEEMV--GLGKTLKRVCGTG 154 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~--~~l~~~~~lL~~g 154 (218)
++||+|++..++++..+.. .+++.+.++|+||
T Consensus 795 ~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 795 HDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp CSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred CCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 7899999999999876644 5899999999998
No 200
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=100.27 Aligned_cols=113 Identities=15% Similarity=0.110 Sum_probs=84.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.++.+|||+|||+|.++..++ .+++++|+++. ++.+..+|+.+... +.++||+|+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------~~~~~~~d~~~~~~----~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------DPRVTVCDMAQVPL----EDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------STTEEESCTTSCSC----CTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------CceEEEeccccCCC----CCCCEeEEEEe
Confidence 456799999999999988772 58999999875 25677777766433 56789999999
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEc
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTC 189 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~ 189 (218)
.++++ .+...+++.+.++|+|||.+++. ....+....+.+..++.+.||.+.....
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~-~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVA-EVSSRFEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEE-ECGGGCSCHHHHHHHHHHTTEEEEEEEC
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEE-EcCCCCCCHHHHHHHHHHCCCEEEEEec
Confidence 99875 88999999999999999933333 2222222344455555999999887643
No 201
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.39 E-value=2.4e-12 Score=101.74 Aligned_cols=127 Identities=11% Similarity=0.042 Sum_probs=86.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHH------hCCCCceEEEEeecCCCCccccccCCC
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEA------NGLGGRVEVRELVWGSDDLSQLSELGE 124 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~~ 124 (218)
++.+|||||||+|.+++.+++. +...++++|+++ +++.|+++++. .+. .++.++.+|+..... ...+.++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~-~~~~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLP-NFFYKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHH-HHCCTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhh-hhCCCcC
Confidence 4568999999999999999865 345899999999 99999988764 233 459999998865221 1124678
Q ss_pred CcEEEEcccccCCc--------chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCC-cEE
Q 046623 125 FDMVIMSDVFYDPE--------EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQG-FRV 184 (218)
Q Consensus 125 ~D~Iv~~~~~~~~~--------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~g-f~~ 184 (218)
+|.|+++.+-.+.. ....+++.+.++|+||| .+++.+............+ ...+ |..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG--~l~~~td~~~~~~~~~~~l-~~~~~f~~ 189 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGG--LVYTITDVLELHDWMCTHF-EEHPLFER 189 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEE--EEEEEESCHHHHHHHHHHH-HTSTTEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCC--EEEEEeCCHHHHHHHHHHH-HHCCCccc
Confidence 99998753321111 12579999999999999 3343334333344444444 5555 443
No 202
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.39 E-value=4.7e-12 Score=100.57 Aligned_cols=102 Identities=11% Similarity=-0.018 Sum_probs=77.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHh--------CCCCceEEEEeecCCCCccccccC
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEAN--------GLGGRVEVRELVWGSDDLSQLSEL 122 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~ 122 (218)
++.+|||+|||+|.+++.+++.++ .+++++|+++ +++.++++++.+ ++. ++.++.+|+.+... .....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~-~~~~~ 126 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLP-NFFEK 126 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGG-GTSCT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHH-Hhccc
Confidence 567999999999999999987764 4899999999 999999998876 654 58999998875321 11245
Q ss_pred CCCcEEEEcccccCC--------cchHHHHHHHHHHhcCCCc
Q 046623 123 GEFDMVIMSDVFYDP--------EEMVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~--------~~~~~~l~~~~~lL~~gG~ 156 (218)
+.+|.|++..+-... .....++..+.++|+|||.
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~ 168 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGV 168 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCE
Confidence 789999865331110 0125899999999999993
No 203
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.39 E-value=2e-12 Score=107.88 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=92.9
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|..+..+++.. ..+++++|+++.+. +++.+..+..++++++.+|+.+ .. + +||+|+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~----p--~~D~v~ 252 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFLR-EV----P--HADVHV 252 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTTT-CC----C--CCSEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCCCCeEEEecCCCC-CC----C--CCcEEE
Confidence 3456799999999999999987653 45789999865433 3333333445679999999862 22 3 899999
Q ss_pred EcccccCCcch--HHHHHHHHHHhcCCCceEEEEEeec---------------------cCChHHHHHHHHHhCCcEEEE
Q 046623 130 MSDVFYDPEEM--VGLGKTLKRVCGTGRHTVVWAVSEV---------------------RTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 130 ~~~~~~~~~~~--~~~l~~~~~lL~~gG~~~i~~~~~~---------------------~~~~~~~~~~~~~~~gf~~~~ 186 (218)
+..++|+..+. ..+++++.++|+|||.+++.-.... +....+.+..++++.||...+
T Consensus 253 ~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 253 LKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred EehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 99999988766 6999999999999995554421110 012345566667999999988
Q ss_pred E
Q 046623 187 L 187 (218)
Q Consensus 187 ~ 187 (218)
+
T Consensus 333 ~ 333 (348)
T 3lst_A 333 V 333 (348)
T ss_dssp E
T ss_pred E
Confidence 7
No 204
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.39 E-value=1.4e-11 Score=94.50 Aligned_cols=134 Identities=13% Similarity=0.132 Sum_probs=85.6
Q ss_pred hHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHh-C--CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecC
Q 046623 38 SALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARL-G--ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWG 112 (218)
Q Consensus 38 ~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~-~--~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~ 112 (218)
++..|.+.+.... ..++.+|||+|||+|.++..+++. + ..+|+++|+++ +. . .++.++.+|+.
T Consensus 6 ~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~-----------~-~~v~~~~~d~~ 73 (201)
T 2plw_A 6 AAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP-----------I-PNVYFIQGEIG 73 (201)
T ss_dssp THHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-----------C-TTCEEEECCTT
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-----------C-CCceEEEcccc
Confidence 3445555554422 245679999999999999999865 3 35899999998 41 1 34788888887
Q ss_pred CCCcc---------------------ccccCCCCcEEEEcccccCCc----c-------hHHHHHHHHHHhcCCCceEEE
Q 046623 113 SDDLS---------------------QLSELGEFDMVIMSDVFYDPE----E-------MVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 113 ~~~~~---------------------~~~~~~~~D~Iv~~~~~~~~~----~-------~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.... ...+..+||+|+++.+++... + ..++++.+.++|+|||.+++.
T Consensus 74 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 74 KDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp TTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 65400 001346899999976655421 1 124788899999999944443
Q ss_pred EEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 161 AVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.. ......+....+ . ..|....+
T Consensus 154 ~~--~~~~~~~l~~~l-~-~~f~~v~~ 176 (201)
T 2plw_A 154 MY--LGSQTNNLKTYL-K-GMFQLVHT 176 (201)
T ss_dssp EE--CSTTHHHHHHHH-H-TTEEEEEE
T ss_pred Ee--CCCCHHHHHHHH-H-HHHheEEE
Confidence 32 223344555444 4 35665554
No 205
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.38 E-value=1e-12 Score=101.73 Aligned_cols=96 Identities=21% Similarity=0.142 Sum_probs=78.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
++.+|||+|||+|..++.+++. + ..+|+++|+++ +++.++++++..+..++++++.+|..+.... ..+ ||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG---QRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT---CCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc---CCC-CCEEE
Confidence 5679999999999999999865 2 35999999999 9999999999888766799998876542110 235 99999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCC
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
++.. ......+++.+.++|+|||
T Consensus 132 ~~~~---~~~~~~~l~~~~~~LkpgG 154 (210)
T 3c3p_A 132 MDCD---VFNGADVLERMNRCLAKNA 154 (210)
T ss_dssp EETT---TSCHHHHHHHHGGGEEEEE
T ss_pred EcCC---hhhhHHHHHHHHHhcCCCe
Confidence 8633 3667899999999999999
No 206
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.38 E-value=3.1e-12 Score=99.44 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=88.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHH----HhCCCCceEEEEeecCCCCccccccCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVE----ANGLGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
.++.+|||+|||+|.++..+++.. ..+|+++|+++ +++.+.++.+ ..+.. ++.++.+|+.+... ..+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~----~~~~- 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPP----LSGV- 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCS----CCCE-
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCC----CCCC-
Confidence 467799999999999999998774 45999999999 8886544332 33433 58999999887543 3344
Q ss_pred cEEEEcccc-----cCCcchHHHHHHHHHHhcCCCceEEEEEeec---------------cCChHHHHHHHHHhCCcEEE
Q 046623 126 DMVIMSDVF-----YDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV---------------RTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 126 D~Iv~~~~~-----~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---------------~~~~~~~~~~~~~~~gf~~~ 185 (218)
|.+++..++ ++..+...+++.+.++|||||.+++...... .....+.+..++.+.||.+.
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 666643322 1334558999999999999994444322111 01123335556689999998
Q ss_pred EEE
Q 046623 186 ELT 188 (218)
Q Consensus 186 ~~~ 188 (218)
.+.
T Consensus 180 ~~~ 182 (218)
T 3mq2_A 180 DCR 182 (218)
T ss_dssp EEE
T ss_pred eee
Confidence 873
No 207
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.38 E-value=3.5e-12 Score=100.81 Aligned_cols=134 Identities=12% Similarity=0.017 Sum_probs=94.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC--CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc----------
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG--ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ---------- 118 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~--~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~---------- 118 (218)
.++.+|||+|||+|..+..+++.. ..+++++|+++ +++.++++++..+..+++.+..+|..+.....
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 356799999999999999998763 35999999999 99999999998887767899988764321100
Q ss_pred -ccc-C-CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccC--------------ChHHHHHHHHHhCC
Q 046623 119 -LSE-L-GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRT--------------RTGDCLHELIMSQG 181 (218)
Q Consensus 119 -~~~-~-~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--------------~~~~~~~~~~~~~g 181 (218)
..+ . ++||+|+++.. ......+++.+.++|+||| .+++...... ...++...+.....
T Consensus 139 ~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG--~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGG--LLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSL 213 (239)
T ss_dssp TTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEE--EEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTT
T ss_pred ccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCe--EEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCC
Confidence 001 2 78999998643 3556789999999999999 3333321110 12344444434566
Q ss_pred cEEEEEEcc
Q 046623 182 FRVIELTCQ 190 (218)
Q Consensus 182 f~~~~~~~~ 190 (218)
|....+|+.
T Consensus 214 ~~~~~~p~~ 222 (239)
T 2hnk_A 214 VDVSLVPIA 222 (239)
T ss_dssp EEEEEECST
T ss_pred eEEEEEEcC
Confidence 777767654
No 208
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.37 E-value=2.1e-12 Score=107.59 Aligned_cols=146 Identities=14% Similarity=-0.003 Sum_probs=97.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC------CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCC
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGA------TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~------~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
++.+|||+|||+|.+++.+++... .+++++|+++ +++.|+.|+...+. ++.+..+|..... ..++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-----~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-----LVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-----CCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-----ccCCc
Confidence 567999999999999998865431 5899999999 99999999988886 3788888876532 34689
Q ss_pred cEEEEcccccCCcc-----------------h-HHHHHHHHHHhcCCCceEEEEEeec-cCChHHHHHHHHHhCCcEE--
Q 046623 126 DMVIMSDVFYDPEE-----------------M-VGLGKTLKRVCGTGRHTVVWAVSEV-RTRTGDCLHELIMSQGFRV-- 184 (218)
Q Consensus 126 D~Iv~~~~~~~~~~-----------------~-~~~l~~~~~lL~~gG~~~i~~~~~~-~~~~~~~~~~~~~~~gf~~-- 184 (218)
|+|++++|++.... . ..++..+.+.|+|||.+++++.... .....+.++..+.+.++..
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~i 282 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGI 282 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEe
Confidence 99999999743211 1 2578999999999995555553331 1222344444446666643
Q ss_pred EEEEccCCCCCCCceeEEEec
Q 046623 185 IELTCQLGGGCPEAFAVYELI 205 (218)
Q Consensus 185 ~~~~~~~~~~~~~~~~l~~~~ 205 (218)
+..|............++.+.
T Consensus 283 i~lp~~~F~~~~~~~~i~vl~ 303 (344)
T 2f8l_A 283 IKLPETLFKSEQARKSILILE 303 (344)
T ss_dssp EECCGGGSCC-CCCEEEEEEE
T ss_pred eeCChhhccCCCCceEEEEEE
Confidence 333433333333334444443
No 209
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.37 E-value=5.6e-12 Score=99.67 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=80.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc---cCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS---ELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~~ 125 (218)
.++.+|||+|||+|..++.+++. + ..+++++|+++ +++.++++++..++.++++++.+|..+....... ..++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 35679999999999999999865 3 35999999999 9999999999988877799998876543211000 14689
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
|+|++... ......+++.+.++|+|||
T Consensus 149 D~I~~d~~---~~~~~~~l~~~~~~L~pGG 175 (237)
T 3c3y_A 149 DFGFVDAD---KPNYIKYHERLMKLVKVGG 175 (237)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEE
T ss_pred CEEEECCc---hHHHHHHHHHHHHhcCCCe
Confidence 99998643 2467889999999999999
No 210
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.36 E-value=4.3e-12 Score=100.03 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=76.7
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|.++..+++....+|+++|+++ +++.+++++...+..+ +.+..+|.... . ....+||+|+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~---~~~~~fD~Ii 163 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSKG-F---PPKAPYDVII 163 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGC-C---GGGCCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCcccC-C---CCCCCccEEE
Confidence 356789999999999999999766436899999999 9999999999888754 88888886222 1 1334699999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
++.++++.. +.+.++|+|||.+++.
T Consensus 164 ~~~~~~~~~------~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 164 VTAGAPKIP------EPLIEQLKIGGKLIIP 188 (235)
T ss_dssp ECSBBSSCC------HHHHHTEEEEEEEEEE
T ss_pred ECCcHHHHH------HHHHHhcCCCcEEEEE
Confidence 988876533 4678899999944333
No 211
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.36 E-value=7.2e-12 Score=103.97 Aligned_cols=116 Identities=17% Similarity=0.088 Sum_probs=81.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcc-hHHHHHHHHHHhC----------CCCceEEEEeecCCCCccc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKP-LLPGLINNVEANG----------LGGRVEVRELVWGSDDLSQ 118 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~-~~~~a~~~~~~~~----------~~~~~~~~~~d~~~~~~~~ 118 (218)
.++.+|||+|||+|.++..+++. ++ .+|+++|+++ +++.+++++...+ ...++++..+|+.+....
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~- 182 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED- 182 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc-
Confidence 57889999999999999999875 54 6999999999 9999999998532 224689999888765210
Q ss_pred cccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHH
Q 046623 119 LSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~ 176 (218)
.+.++||+|+++.+ ....+++.+.++|+|||.++++ ........+.++.+
T Consensus 183 -~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~--~~~~~~~~~~~~~l 232 (336)
T 2b25_A 183 -IKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVY--VVNITQVIELLDGI 232 (336)
T ss_dssp ------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEE--ESSHHHHHHHHHHH
T ss_pred -cCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEE--eCCHHHHHHHHHHH
Confidence 13457999998543 2344889999999999944433 33333444555554
No 212
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.36 E-value=9.8e-12 Score=105.92 Aligned_cols=151 Identities=15% Similarity=0.010 Sum_probs=99.8
Q ss_pred HHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 40 LILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 40 ~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
..+.+++.. ....++.+|||+|||+|.+++.+++. +..+++++|+++ +++.+ .++++..+|+....
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~ 94 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWE 94 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCC
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcC
Confidence 334555544 22235669999999999999998764 346999999999 88766 24888888876542
Q ss_pred ccccccCCCCcEEEEcccccCCcc-----------------------------hHHHHHHHHHHhcCCCceEEEEEeec-
Q 046623 116 LSQLSELGEFDMVIMSDVFYDPEE-----------------------------MVGLGKTLKRVCGTGRHTVVWAVSEV- 165 (218)
Q Consensus 116 ~~~~~~~~~~D~Iv~~~~~~~~~~-----------------------------~~~~l~~~~~lL~~gG~~~i~~~~~~- 165 (218)
..++||+|++|+|+..... ...+++.+.++|+|||.+.+++....
T Consensus 95 -----~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l 169 (421)
T 2ih2_A 95 -----PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWL 169 (421)
T ss_dssp -----CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGG
T ss_pred -----ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHh
Confidence 3468999999999854322 12668889999999995555554331
Q ss_pred -cCChHHHHHHHHHhCCc-EEEEEEccCCCCCCCceeEEEecCC
Q 046623 166 -RTRTGDCLHELIMSQGF-RVIELTCQLGGGCPEAFAVYELIPP 207 (218)
Q Consensus 166 -~~~~~~~~~~~~~~~gf-~~~~~~~~~~~~~~~~~~l~~~~~~ 207 (218)
...... ++..+.+.++ .+...+ ...++......++.+.+.
T Consensus 170 ~~~~~~~-lr~~l~~~~~~~i~~l~-~~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 170 VLEDFAL-LREFLAREGKTSVYYLG-EVFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp TCGGGHH-HHHHHHHHSEEEEEEEE-SCSTTCCCCEEEEEEESS
T ss_pred cCccHHH-HHHHHHhcCCeEEEECC-CCCCCCCccEEEEEEEeC
Confidence 112334 4444455565 334446 444566666677776654
No 213
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.35 E-value=2.9e-12 Score=100.94 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=79.0
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccC--CCCcE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSEL--GEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~D~ 127 (218)
++.+|||+|||+|..++.+++. + ..+++++|+++ +++.++++++..++.++++++.+|..+......... ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 5679999999999999999865 2 35999999999 999999999998887779999877643211100012 68999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
|++... ......+++.+.++|+|||
T Consensus 152 V~~d~~---~~~~~~~l~~~~~~LkpgG 176 (232)
T 3cbg_A 152 IFIDAD---KRNYPRYYEIGLNLLRRGG 176 (232)
T ss_dssp EEECSC---GGGHHHHHHHHHHTEEEEE
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCe
Confidence 998654 2567889999999999999
No 214
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.35 E-value=4.2e-12 Score=99.33 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=80.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCC------CeEEEecCcc-hHHHHHHHHHHhCC----CCceEEEEeecCCCCccccc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGA------TRVVLTDVKP-LLPGLINNVEANGL----GGRVEVRELVWGSDDLSQLS 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~------~~v~~~D~~~-~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~ 120 (218)
.++.+|||+|||+|..+..+++... .+|+++|+++ +++.++++++..+. ..++.++.+|..........
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 4678999999999999999987642 4999999999 99999999988763 34589998887654310001
Q ss_pred cCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEE
Q 046623 121 ELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
..++||+|+++.++++ +++.+.++|+|||.+++.+.
T Consensus 159 ~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEEEEc
Confidence 4578999999877654 45788999999995444433
No 215
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.34 E-value=1.3e-12 Score=102.70 Aligned_cols=132 Identities=14% Similarity=0.056 Sum_probs=87.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc--hHHHH---HHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP--LLPGL---INNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~--~~~~a---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
++.+|||+|||+|.++..+++. +..+|+++|+|+ +++.| +++....+.. ++.+..+|...... . ..+.+|
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~-~--~~d~v~ 99 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPF-E--LKNIAD 99 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCG-G--GTTCEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhh-h--ccCeEE
Confidence 5779999999999999998853 345899999995 55554 7777676664 48899888776532 1 225677
Q ss_pred EEEEcccccC-----CcchHHHHHHHHHHhcCCCceEEEEEeec---------c----C---C-hHHHHHHHHHhCCcEE
Q 046623 127 MVIMSDVFYD-----PEEMVGLGKTLKRVCGTGRHTVVWAVSEV---------R----T---R-TGDCLHELIMSQGFRV 184 (218)
Q Consensus 127 ~Iv~~~~~~~-----~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---------~----~---~-~~~~~~~~~~~~gf~~ 184 (218)
.|.++.++.+ ......++..+.++|||||.+++...... + . + ..+.+...+.+.||.+
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v 179 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRI 179 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEE
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCe
Confidence 7777654322 12345789999999999995555211110 0 0 0 1111455558899998
Q ss_pred EEEE
Q 046623 185 IELT 188 (218)
Q Consensus 185 ~~~~ 188 (218)
..+.
T Consensus 180 ~~~~ 183 (225)
T 3p2e_A 180 DDVK 183 (225)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8873
No 216
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.33 E-value=1.2e-11 Score=100.04 Aligned_cols=107 Identities=12% Similarity=0.127 Sum_probs=81.8
Q ss_pred CCCeEEEECCCC---CHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-------ccc
Q 046623 53 QNKSVLELGAGA---GLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-------QLS 120 (218)
Q Consensus 53 ~~~~vLDlG~G~---G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~ 120 (218)
...+|||||||+ |.++..+.+. +..+|+++|+++ +++.+++++... .++.++.+|+.+.... ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccC
Confidence 347999999999 9887666554 345999999999 999999887432 4699999998763210 111
Q ss_pred cCCCCcEEEEcccccCCcc--hHHHHHHHHHHhcCCCceEEEEE
Q 046623 121 ELGEFDMVIMSDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
+.++||+|+++.++|+..+ ...+++++.++|+|||.+++...
T Consensus 154 d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 3358999999999998655 89999999999999995544433
No 217
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.33 E-value=6.3e-12 Score=98.26 Aligned_cols=99 Identities=20% Similarity=0.241 Sum_probs=77.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CC-CeEEEecCcc-hHHHHHHHHHHhCC----CCceEEEEeecCCCCccccccCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GA-TRVVLTDVKP-LLPGLINNVEANGL----GGRVEVRELVWGSDDLSQLSELGE 124 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~~D~~~-~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~ 124 (218)
.++.+|||+|||+|..+..+++. +. .+|+++|+++ +++.+++++...+. ..++.+..+|...... ..++
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~ 151 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA----EEAP 151 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG----GGCC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc----cCCC
Confidence 46789999999999999998765 43 4999999999 99999999988654 3458899888764322 3568
Q ss_pred CcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 125 FDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 125 ~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
||+|+++.++.+ +++.+.++|+|||.+++.
T Consensus 152 fD~i~~~~~~~~------~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 152 YDAIHVGAAAPV------VPQALIDQLKPGGRLILP 181 (226)
T ss_dssp EEEEEECSBBSS------CCHHHHHTEEEEEEEEEE
T ss_pred cCEEEECCchHH------HHHHHHHhcCCCcEEEEE
Confidence 999999877643 446788999999944443
No 218
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.33 E-value=3.7e-11 Score=101.75 Aligned_cols=118 Identities=17% Similarity=0.192 Sum_probs=88.3
Q ss_pred HHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCC---------------------------------------CeE
Q 046623 40 LILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGA---------------------------------------TRV 79 (218)
Q Consensus 40 ~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~---------------------------------------~~v 79 (218)
..++..+.. ..-.++.++||++||+|.+++.++..+. .++
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 345555444 2234677999999999999999875432 359
Q ss_pred EEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCC----cchHHHHHHHHHHhcC-
Q 046623 80 VLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP----EEMVGLGKTLKRVCGT- 153 (218)
Q Consensus 80 ~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~----~~~~~~l~~~~~lL~~- 153 (218)
+++|+++ +++.|+.|++.+++.+.+++...|+.+.. ...+||+|++|+|+... .....+...+.+.|++
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~-----~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQ-----TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCC-----CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCC-----CCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 9999999 99999999999998878999999887654 33589999999998643 3455566667777776
Q ss_pred -CCceEEEEE
Q 046623 154 -GRHTVVWAV 162 (218)
Q Consensus 154 -gG~~~i~~~ 162 (218)
||.+.+++.
T Consensus 342 ~g~~~~iit~ 351 (393)
T 3k0b_A 342 PTWSVYVLTS 351 (393)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 775555543
No 219
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.32 E-value=5.7e-11 Score=100.28 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=89.6
Q ss_pred HHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCC---------------------------------------CeE
Q 046623 40 LILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGA---------------------------------------TRV 79 (218)
Q Consensus 40 ~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~---------------------------------------~~v 79 (218)
..|+..+.. ..-.++..+||.+||+|.+.+.++..+. .++
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 345555444 2234678999999999999999875432 259
Q ss_pred EEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCC----cchHHHHHHHHHHhcC-
Q 046623 80 VLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP----EEMVGLGKTLKRVCGT- 153 (218)
Q Consensus 80 ~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~----~~~~~~l~~~~~lL~~- 153 (218)
+++|+++ +++.|+.|++.+++.+.+++...|+.+.. ...+||+|++|+|+... .+..++...+.+.|++
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~-----~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~ 334 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFK-----TNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL 334 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCC-----CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCC-----ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC
Confidence 9999999 99999999999999888999998887654 33589999999998642 3456677777778876
Q ss_pred -CCceEEEEE
Q 046623 154 -GRHTVVWAV 162 (218)
Q Consensus 154 -gG~~~i~~~ 162 (218)
||.+.+++.
T Consensus 335 ~g~~~~iit~ 344 (384)
T 3ldg_A 335 KTWSQFILTN 344 (384)
T ss_dssp TTSEEEEEES
T ss_pred CCcEEEEEEC
Confidence 775555543
No 220
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.31 E-value=5.3e-11 Score=100.59 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=88.5
Q ss_pred HHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCC---------------------------------------CeE
Q 046623 40 LILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGA---------------------------------------TRV 79 (218)
Q Consensus 40 ~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~---------------------------------------~~v 79 (218)
..++..+.. ..-.++.+|||++||+|.+++.++..+. .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 345555544 2335678999999999999999875532 369
Q ss_pred EEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCC----cchHHHHHHHHHHhcC-
Q 046623 80 VLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP----EEMVGLGKTLKRVCGT- 153 (218)
Q Consensus 80 ~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~----~~~~~~l~~~~~lL~~- 153 (218)
+++|+++ +++.|+.|+..+++.+.+++...|+.+.. ...+||+|++|+|+... .....+...+.+.|++
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~-----~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFK-----SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCC-----CSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcC-----cCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 9999999 99999999999998777999998887654 34589999999997642 3456677777777776
Q ss_pred -CCceEEEE
Q 046623 154 -GRHTVVWA 161 (218)
Q Consensus 154 -gG~~~i~~ 161 (218)
|+.+.+++
T Consensus 336 ~g~~~~iit 344 (385)
T 3ldu_A 336 KNWSYYLIT 344 (385)
T ss_dssp BSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 77444443
No 221
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.30 E-value=5.2e-11 Score=100.09 Aligned_cols=121 Identities=17% Similarity=0.145 Sum_probs=88.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.+..+|||+|||+|..+..+++. +..+++++|+ + +++.++++ .+++++.+|+.+ .. +.+ |+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~----p~~--D~v~ 266 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GV----PKG--DAIF 266 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC----CCC--SEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CC----CCC--CEEE
Confidence 45679999999999999998754 4468999999 6 77665432 459999999875 22 332 9999
Q ss_pred EcccccCCcc--hHHHHHHHHHHhcCCCceEEEEEee--------------------------ccCChHHHHHHHHHhCC
Q 046623 130 MSDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSE--------------------------VRTRTGDCLHELIMSQG 181 (218)
Q Consensus 130 ~~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~--------------------------~~~~~~~~~~~~~~~~g 181 (218)
+..++|+..+ ...+++++.+.|+|||.+++.-... .+....+.+..++++.|
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AG 346 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASG 346 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTT
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCC
Confidence 9999987654 4589999999999999555542110 01122445666779999
Q ss_pred cEEEEE
Q 046623 182 FRVIEL 187 (218)
Q Consensus 182 f~~~~~ 187 (218)
|...++
T Consensus 347 F~~v~~ 352 (368)
T 3reo_A 347 FRGFKV 352 (368)
T ss_dssp CCEEEE
T ss_pred CeeeEE
Confidence 998887
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.30 E-value=4.2e-12 Score=102.71 Aligned_cols=156 Identities=13% Similarity=-0.029 Sum_probs=91.0
Q ss_pred cchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHH-HHhCCCCceEEE--Eeec
Q 046623 35 LWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNV-EANGLGGRVEVR--ELVW 111 (218)
Q Consensus 35 ~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~ 111 (218)
.-.++..+...+......++.+|||+|||+|.++..+++. .+|+++|++++...++++. .......++.++ .+|+
T Consensus 64 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~ 141 (276)
T 2wa2_A 64 VSRGTAKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDV 141 (276)
T ss_dssp -CHHHHHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCG
T ss_pred CchHHHHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcH
Confidence 3456666776666533356789999999999999999877 4899999998322221110 000011147777 7776
Q ss_pred CCCCccccccCCCCcEEEEcccccCCcch-------HHHHHHHHHHhcCCC--ceEEEEEeeccCChHHHHHHHHHhCCc
Q 046623 112 GSDDLSQLSELGEFDMVIMSDVFYDPEEM-------VGLGKTLKRVCGTGR--HTVVWAVSEVRTRTGDCLHELIMSQGF 182 (218)
Q Consensus 112 ~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~-------~~~l~~~~~lL~~gG--~~~i~~~~~~~~~~~~~~~~~~~~~gf 182 (218)
... +.++||+|+++.. +..... ..+++.+.++|+||| .+++-...+......+.+..+ . ..|
T Consensus 142 ~~l------~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l-~-~~f 212 (276)
T 2wa2_A 142 TKM------EPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKM-Q-ARF 212 (276)
T ss_dssp GGC------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHH-H-HHH
T ss_pred hhC------CCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHH-H-HHc
Confidence 542 3568999999755 322111 136888999999999 666643322111112444554 2 234
Q ss_pred EEEEE-EccCCCCCCCceeE
Q 046623 183 RVIEL-TCQLGGGCPEAFAV 201 (218)
Q Consensus 183 ~~~~~-~~~~~~~~~~~~~l 201 (218)
....+ |...+....+++.+
T Consensus 213 ~~v~v~P~~sR~~s~E~y~v 232 (276)
T 2wa2_A 213 GGGLIRVPLSRNSTHEMYFV 232 (276)
T ss_dssp CCEEECCTTSCTTCCCEEEE
T ss_pred CCEEEEcCCCCCcchheEEe
Confidence 33333 55555444444433
No 223
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.30 E-value=2.6e-11 Score=104.37 Aligned_cols=127 Identities=16% Similarity=0.140 Sum_probs=91.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh--------------CCCeEEEecCcc-hHHHHHHHHHHhCCCC-ceEEEEeecCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL--------------GATRVVLTDVKP-LLPGLINNVEANGLGG-RVEVRELVWGSDD 115 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~--------------~~~~v~~~D~~~-~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~ 115 (218)
.++.+|||.|||+|.+.+.+++. ...+++|+|+++ ++..|+.|+...++.. ..++..+|.....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 45679999999999999888643 224799999999 9999999998888742 4778888876543
Q ss_pred ccccccCCCCcEEEEcccccCCcc-----------------hHHHHHHHHHHhcCCCceEEEEEeec--cCChHHHHH-H
Q 046623 116 LSQLSELGEFDMVIMSDVFYDPEE-----------------MVGLGKTLKRVCGTGRHTVVWAVSEV--RTRTGDCLH-E 175 (218)
Q Consensus 116 ~~~~~~~~~~D~Iv~~~~~~~~~~-----------------~~~~l~~~~~lL~~gG~~~i~~~~~~--~~~~~~~~~-~ 175 (218)
...+||+|++|+|+..... ...++..+.++|+|||++.+++.... +....+.++ .
T Consensus 250 -----~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~ 324 (445)
T 2okc_A 250 -----PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKR 324 (445)
T ss_dssp -----CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHH
T ss_pred -----ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHH
Confidence 2348999999999875321 13788999999999996666665431 222333344 4
Q ss_pred HHHhCCcE
Q 046623 176 LIMSQGFR 183 (218)
Q Consensus 176 ~~~~~gf~ 183 (218)
+++...+.
T Consensus 325 L~~~~~l~ 332 (445)
T 2okc_A 325 LLQDFNLH 332 (445)
T ss_dssp HHHHEEEE
T ss_pred HHhcCcEE
Confidence 54454444
No 224
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.29 E-value=3.5e-12 Score=105.35 Aligned_cols=105 Identities=13% Similarity=0.076 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHH--hCC-CCceEEEEeecCCCCccccccCCCCcE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEA--NGL-GGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
++.+|||+|||+|..+..+++. +..+++++|+++ +++.+++++.. ++. ..+++++.+|+.+... ...++||+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~---~~~~~fDv 192 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE---NVTNTYDV 192 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH---HCCSCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh---hcCCCceE
Confidence 4679999999999999999876 456999999999 99999999765 222 3568999887654211 13468999
Q ss_pred EEEccc--ccCCcc--hHHHHHHHHHHhcCCCceEEE
Q 046623 128 VIMSDV--FYDPEE--MVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 128 Iv~~~~--~~~~~~--~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+++.+ ...... ..++++.+.++|+|||.+++.
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998643 111111 178999999999999944443
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.29 E-value=6.2e-12 Score=102.74 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=76.6
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHH--hCC-CCceEEEEeecCCCCccccccCCCCcE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEA--NGL-GGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
++.+|||+|||+|..+..+++. +..+++++|+++ +++.+++++.. .+. ..+++++.+|...... ...++||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~---~~~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR---KFKNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG---GCSSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh---hCCCCceE
Confidence 4579999999999999999876 457999999999 99999998864 222 2568999887644221 13468999
Q ss_pred EEEcccccCCc-----chHHHHHHHHHHhcCCCceEEE
Q 046623 128 VIMSDVFYDPE-----EMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 128 Iv~~~~~~~~~-----~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+++.+..... ...++++.+.++|+|||.+++.
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99854322011 2378999999999999944443
No 226
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.28 E-value=1.7e-11 Score=96.93 Aligned_cols=94 Identities=10% Similarity=-0.037 Sum_probs=70.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-----CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-----GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-----~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
++.+|||+|||+|..+..+++. +..+|+++|+++ +++.++. ...+++++.+|..+...-......+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCC
Confidence 4679999999999999999865 346999999999 8877761 125699999998764100011223799
Q ss_pred EEEEcccccCCcchHHHHHHHHH-HhcCCC
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKR-VCGTGR 155 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~-lL~~gG 155 (218)
+|++... + .....++..+.+ +|+|||
T Consensus 155 ~I~~d~~-~--~~~~~~l~~~~r~~LkpGG 181 (236)
T 2bm8_A 155 LIFIDNA-H--ANTFNIMKWAVDHLLEEGD 181 (236)
T ss_dssp EEEEESS-C--SSHHHHHHHHHHHTCCTTC
T ss_pred EEEECCc-h--HhHHHHHHHHHHhhCCCCC
Confidence 9998654 2 467889999997 999999
No 227
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.28 E-value=1.9e-12 Score=109.37 Aligned_cols=103 Identities=12% Similarity=0.050 Sum_probs=80.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCc-eEEEEeecCCCCccccccCCCCcEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGR-VEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
++.+|||++||+|.+++.+++. |+.+|+++|+++ +++.+++|++.|++.++ ++++.+|..+..... ..++||+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~--~~~~fD~V 129 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE--WGFGFDYV 129 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC--CSSCEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh--hCCCCcEE
Confidence 4679999999999999999874 446899999999 99999999999998776 889887764321100 23579999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
++++ + ....++++.+.++|++|| ++++.+
T Consensus 130 ~lDP-~---g~~~~~l~~a~~~Lk~gG-ll~~t~ 158 (392)
T 3axs_A 130 DLDP-F---GTPVPFIESVALSMKRGG-ILSLTA 158 (392)
T ss_dssp EECC-S---SCCHHHHHHHHHHEEEEE-EEEEEE
T ss_pred EECC-C---cCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 9965 2 234679999999999999 444433
No 228
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.28 E-value=7.7e-11 Score=89.80 Aligned_cols=133 Identities=15% Similarity=0.054 Sum_probs=81.8
Q ss_pred HHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHh-CC---------CeEEEecCcc-hHHHHHHHHHHhCCCCceEE
Q 046623 39 ALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARL-GA---------TRVVLTDVKP-LLPGLINNVEANGLGGRVEV 106 (218)
Q Consensus 39 ~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~-~~---------~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~ 106 (218)
...+.+...... ..++.+|||+|||+|.++..+++. +. .+|+++|+++ +. . .++.+
T Consensus 7 ~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~-~~~~~ 74 (196)
T 2nyu_A 7 AFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------L-EGATF 74 (196)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------C-TTCEE
T ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------C-CCCeE
Confidence 344555444322 246789999999999999999866 53 6899999998 41 1 23777
Q ss_pred E-EeecCCCCccc----cccCCCCcEEEEcccccCC----cch-------HHHHHHHHHHhcCCCceEEEEEeeccCChH
Q 046623 107 R-ELVWGSDDLSQ----LSELGEFDMVIMSDVFYDP----EEM-------VGLGKTLKRVCGTGRHTVVWAVSEVRTRTG 170 (218)
Q Consensus 107 ~-~~d~~~~~~~~----~~~~~~~D~Iv~~~~~~~~----~~~-------~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~ 170 (218)
. .+|+....... ..+.++||+|+++.+++.. .+. ..+++.+.++|+|||.+++.. .......
T Consensus 75 ~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~--~~~~~~~ 152 (196)
T 2nyu_A 75 LCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT--WAGSQSR 152 (196)
T ss_dssp ECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE--CCSGGGH
T ss_pred EEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe--cCCccHH
Confidence 7 77765432110 0123589999996644321 111 478899999999999444332 2223344
Q ss_pred HHHHHHHHhCCcEEEEE
Q 046623 171 DCLHELIMSQGFRVIEL 187 (218)
Q Consensus 171 ~~~~~~~~~~gf~~~~~ 187 (218)
+....+ .. .|....+
T Consensus 153 ~~~~~l-~~-~f~~v~~ 167 (196)
T 2nyu_A 153 RLQRRL-TE-EFQNVRI 167 (196)
T ss_dssp HHHHHH-HH-HEEEEEE
T ss_pred HHHHHH-HH-HhcceEE
Confidence 444444 43 3554443
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.27 E-value=9.1e-12 Score=98.75 Aligned_cols=129 Identities=10% Similarity=0.036 Sum_probs=95.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
...+|||||||+|.+++.++.. +..+|+++|+++ +++.++.|+..+++. ..+...|..... +.+++|++++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~-----p~~~~DvaL~ 204 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR-----LDEPADVTLL 204 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC-----CCSCCSEEEE
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC-----CCCCcchHHH
Confidence 3669999999999999998654 567999999999 999999999999876 677777765544 5688999999
Q ss_pred cccccCCcc--hHHHHHHHHHHhcCCCceEEEEEee--c--c-----CChHHHHHHHHHhCCcEEEEEEccC
Q 046623 131 SDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSE--V--R-----TRTGDCLHELIMSQGFRVIELTCQL 191 (218)
Q Consensus 131 ~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~--~--~-----~~~~~~~~~~~~~~gf~~~~~~~~~ 191 (218)
+-.+++.++ ....+ .+...|+++| +++..+. . + ..-.+.++..+.+.|+.+.++.+..
T Consensus 205 lkti~~Le~q~kg~g~-~ll~aL~~~~--vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~n 273 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGW-EVIDIVNSPN--IVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGN 273 (281)
T ss_dssp TTCHHHHHHHSTTHHH-HHHHHSSCSE--EEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHhhhhhhHHHH-HHHHHhCCCC--EEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecC
Confidence 988877533 23455 7888999998 4444433 0 1 1133445554577888877775543
No 230
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.27 E-value=4.2e-12 Score=112.52 Aligned_cols=104 Identities=26% Similarity=0.193 Sum_probs=80.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.+.+|||+|||.|.++..+|+.|+ +|+|+|.++ +++.|+..+...+.. ++++..++.++... ....++||+|++.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~--~~~~~~fD~v~~~ 141 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIA--ALEEGEFDLAIGL 141 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHH--HCCTTSCSEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhh--hccCCCccEEEEC
Confidence 467999999999999999999987 899999999 999999998877643 38888877755421 0145689999999
Q ss_pred ccccCCcchHHH--HHHHHHHhcCCCceEEE
Q 046623 132 DVFYDPEEMVGL--GKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 132 ~~~~~~~~~~~~--l~~~~~lL~~gG~~~i~ 160 (218)
.+++|..+...+ +..+.+.|+++|..+++
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 999987655433 33456667787754444
No 231
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.26 E-value=1.6e-11 Score=103.46 Aligned_cols=101 Identities=18% Similarity=0.088 Sum_probs=79.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHh---------------CCCCceEEEEeecCCCC
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEAN---------------GLGGRVEVRELVWGSDD 115 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~---------------~~~~~~~~~~~d~~~~~ 115 (218)
++.+|||+|||+|..++.+++. +..+|+++|+++ +++.+++|++.+ ++.+ ++++.+|.....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHH
Confidence 5779999999999999999876 666899999999 999999999999 7654 888887765432
Q ss_pred ccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEE
Q 046623 116 LSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 116 ~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
.. ..++||+|+++ |+. ...++++.+.+++++|| ++++.+
T Consensus 126 ~~---~~~~fD~I~lD-P~~---~~~~~l~~a~~~lk~gG-~l~vt~ 164 (378)
T 2dul_A 126 AE---RHRYFHFIDLD-PFG---SPMEFLDTALRSAKRRG-ILGVTA 164 (378)
T ss_dssp HH---STTCEEEEEEC-CSS---CCHHHHHHHHHHEEEEE-EEEEEE
T ss_pred Hh---ccCCCCEEEeC-CCC---CHHHHHHHHHHhcCCCC-EEEEEe
Confidence 10 13579999974 443 24789999999999999 344433
No 232
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=1.3e-11 Score=96.72 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=75.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHH-hCC------CeEEEecCcc-hHHHHHHHHHHhCC----CCceEEEEeecCCCCcccc
Q 046623 52 FQNKSVLELGAGAGLPGLTAAR-LGA------TRVVLTDVKP-LLPGLINNVEANGL----GGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~-~~~------~~v~~~D~~~-~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~ 119 (218)
.++.+|||+|||+|..+..+++ .+. .+|+++|+++ +++.+++++...+. ..++.+..+|......
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--- 159 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP--- 159 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG---
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC---
Confidence 5678999999999999998876 342 4899999999 99999999877541 1358899888765321
Q ss_pred ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 120 SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..++||+|++..++++. .+.+.++|+|||.+++.
T Consensus 160 -~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 160 -PNAPYNAIHVGAAAPDT------PTELINQLASGGRLIVP 193 (227)
T ss_dssp -GGCSEEEEEECSCBSSC------CHHHHHTEEEEEEEEEE
T ss_pred -cCCCccEEEECCchHHH------HHHHHHHhcCCCEEEEE
Confidence 33689999998877653 37788999999944433
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.25 E-value=4.6e-11 Score=97.01 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=69.1
Q ss_pred HHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc
Q 046623 42 LAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS 120 (218)
Q Consensus 42 l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (218)
+...+......++.+|||+|||+|.++..+++.+. +|+++|+++ +++.+++++...+...+++++.+|+.+...
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~---- 91 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL---- 91 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC----
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc----
Confidence 33333333345678999999999999999988865 999999999 999999998766554568999999876543
Q ss_pred cCCCCcEEEEcccccC
Q 046623 121 ELGEFDMVIMSDVFYD 136 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~ 136 (218)
..||+|+++.|++.
T Consensus 92 --~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 92 --PFFDTCVANLPYQI 105 (285)
T ss_dssp --CCCSEEEEECCGGG
T ss_pred --hhhcEEEEecCccc
Confidence 37999999877654
No 234
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.25 E-value=2.2e-11 Score=98.46 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=77.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHh--CC-CCceEEEEeecCCCCccccccCCCCcE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEAN--GL-GGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++++... +. .++++++.+|...... ...++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~---~~~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA---KSENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH---TCCSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh---hCCCCeeE
Confidence 5679999999999999999876 557999999999 999999988542 23 3578999887643211 13468999
Q ss_pred EEEcccccCCc----chHHHHHHHHHHhcCCCceEE
Q 046623 128 VIMSDVFYDPE----EMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 128 Iv~~~~~~~~~----~~~~~l~~~~~lL~~gG~~~i 159 (218)
|+++.+..... ...++++.+.++|+|||.+++
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 99954432111 136899999999999993333
No 235
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=2.8e-11 Score=96.99 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=72.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|.++..+++. +..+++++|+++ +++.++++. .++.+...|+.+... ..++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~----~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPF----SDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSB----CTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCC----CCCceeEEE
Confidence 46779999999999999998876 245999999999 999887763 347888888766543 457899999
Q ss_pred EcccccCCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 130 MSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
++.+ ...++.+.++|+|||.+++..
T Consensus 154 ~~~~-------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 154 RIYA-------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EESC-------CCCHHHHHHHEEEEEEEEEEE
T ss_pred EeCC-------hhhHHHHHHhcCCCcEEEEEE
Confidence 8655 235788999999999444443
No 236
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.25 E-value=4.9e-11 Score=99.53 Aligned_cols=121 Identities=12% Similarity=0.182 Sum_probs=89.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.+..+|||+|||+|..+..+++. +..+++++|+ + +++.+++. .+++++.+|+.+ .. + .||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~----p--~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SI----P--NADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CC----C--CCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CC----C--CccEEE
Confidence 35679999999999999999765 4458999999 7 87776542 348999988865 22 2 399999
Q ss_pred EcccccCCcchH--HHHHHHHHHhcC---CCceEEEEEeec--c----------------------CChHHHHHHHHHhC
Q 046623 130 MSDVFYDPEEMV--GLGKTLKRVCGT---GRHTVVWAVSEV--R----------------------TRTGDCLHELIMSQ 180 (218)
Q Consensus 130 ~~~~~~~~~~~~--~~l~~~~~lL~~---gG~~~i~~~~~~--~----------------------~~~~~~~~~~~~~~ 180 (218)
+..++|+..+.. .+++++.++|+| ||.+++.-.... . ....+.+..++++.
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~a 331 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEA 331 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHT
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHC
Confidence 999999887766 999999999999 995554422111 0 11234455666899
Q ss_pred CcEEEEE
Q 046623 181 GFRVIEL 187 (218)
Q Consensus 181 gf~~~~~ 187 (218)
||...++
T Consensus 332 Gf~~~~~ 338 (352)
T 1fp2_A 332 GFQHYKI 338 (352)
T ss_dssp TCCEEEE
T ss_pred CCCeeEE
Confidence 9988776
No 237
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.24 E-value=5.5e-11 Score=99.78 Aligned_cols=122 Identities=16% Similarity=0.072 Sum_probs=89.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.+..+|||+|||+|..+..+++. +..+++++|++.+++.+++. .+++++.+|+.+ .. +.+ |+|++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~~v~~~~~D~~~-~~----p~~--D~v~~ 265 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQF-------PGVTHVGGDMFK-EV----PSG--DTILM 265 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-------TTEEEEECCTTT-CC----CCC--SEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhc-------CCeEEEeCCcCC-CC----CCC--CEEEe
Confidence 45679999999999999998754 45689999993376665432 469999999876 32 333 99999
Q ss_pred cccccCCc--chHHHHHHHHHHhcCCCceEEEEEee--------------------------ccCChHHHHHHHHHhCCc
Q 046623 131 SDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSE--------------------------VRTRTGDCLHELIMSQGF 182 (218)
Q Consensus 131 ~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~--------------------------~~~~~~~~~~~~~~~~gf 182 (218)
..++|+.. +...+++++++.|+|||.+++.-... .+....+.+..++++.||
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF 345 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGF 345 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTC
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCC
Confidence 99999764 45689999999999999555542111 011234456666799999
Q ss_pred EEEEE
Q 046623 183 RVIEL 187 (218)
Q Consensus 183 ~~~~~ 187 (218)
...++
T Consensus 346 ~~v~~ 350 (364)
T 3p9c_A 346 TGVKS 350 (364)
T ss_dssp CEEEE
T ss_pred ceEEE
Confidence 98887
No 238
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.24 E-value=5.9e-11 Score=99.81 Aligned_cols=121 Identities=12% Similarity=0.070 Sum_probs=89.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.++.+|||+|||+|..+..+++.. ..+++++|+ + +++.+++. .+++++.+|+.+ .. +. ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~----~~--~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SV----PQ--GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC----CC--EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CC----CC--CCEEE
Confidence 456799999999999999997664 357889999 6 77766531 348999998876 22 22 99999
Q ss_pred EcccccCCcchH--HHHHHHHHHhcCCCceEEEEEeec-------------------------cCChHHHHHHHHHhCCc
Q 046623 130 MSDVFYDPEEMV--GLGKTLKRVCGTGRHTVVWAVSEV-------------------------RTRTGDCLHELIMSQGF 182 (218)
Q Consensus 130 ~~~~~~~~~~~~--~~l~~~~~lL~~gG~~~i~~~~~~-------------------------~~~~~~~~~~~~~~~gf 182 (218)
++.++|+..+.. .+++.+.++|+|||.+++.-.... +....+.+..++++.||
T Consensus 273 ~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 352 (372)
T 1fp1_D 273 LKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGF 352 (372)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred EecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCC
Confidence 999999887776 999999999999995555421111 11123445566688999
Q ss_pred EEEEE
Q 046623 183 RVIEL 187 (218)
Q Consensus 183 ~~~~~ 187 (218)
...++
T Consensus 353 ~~~~~ 357 (372)
T 1fp1_D 353 SKFQV 357 (372)
T ss_dssp SEEEE
T ss_pred ceEEE
Confidence 88776
No 239
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.24 E-value=1.5e-10 Score=90.89 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=78.2
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.+++.+. +..+|+++|+++ +++.++.++..++.. ..+...|..... +.+++|+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~--~~~~v~D~~~~~-----~~~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWD--FTFALQDVLCAP-----PAEAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCE--EEEEECCTTTSC-----CCCBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeecccCC-----CCCCcchHHH
Confidence 457799999999999999887 667999999999 999999999888843 788888876655 4568999999
Q ss_pred cccccCCc--chHHHHHHHHHHhcCCCceEEEEEe
Q 046623 131 SDVFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVS 163 (218)
Q Consensus 131 ~~~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~ 163 (218)
...+++.+ .....+ .+...|++++ +++..+
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~~--vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTPR--MAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCSE--EEEEEE
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCCC--EEEEcC
Confidence 87776542 223344 7777999988 444443
No 240
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.23 E-value=1.4e-11 Score=99.96 Aligned_cols=103 Identities=13% Similarity=0.023 Sum_probs=76.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh--CC--------CCceEEEEeecCCCCcccccc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEAN--GL--------GGRVEVRELVWGSDDLSQLSE 121 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~--~~--------~~~~~~~~~d~~~~~~~~~~~ 121 (218)
++.+|||+|||+|..+..+++.+..+++++|+++ +++.+++++ .. ++ ..+++++.+|..+... .
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~----~ 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK----N 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH----H
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc----c
Confidence 5679999999999999999876667999999999 999999987 33 21 3568888877543211 1
Q ss_pred CCCCcEEEEcccccCC--cc--hHHHHHHHHHHhcCCCceEEE
Q 046623 122 LGEFDMVIMSDVFYDP--EE--MVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~--~~--~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.++||+|+++.+.... .. ..++++.+.++|+|||.+++.
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 4689999996553211 11 378899999999999944444
No 241
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.23 E-value=2.4e-11 Score=99.99 Aligned_cols=107 Identities=15% Similarity=0.057 Sum_probs=79.9
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHH-hC--C-CCceEEEEeecCCCCccccccCCCCc
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEA-NG--L-GGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~-~~--~-~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
++.+|||+|||+|..+..+++. +..+++++|+++ +++.+++++.. ++ . ..+++++.+|..+... ...++||
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~---~~~~~fD 153 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE---RTEERYD 153 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH---HCCCCEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH---hcCCCcc
Confidence 4679999999999999999876 456999999999 99999998864 11 1 3568999887654311 1356899
Q ss_pred EEEEcccccC---Cc--c--hHHHHHHHHHHhcCCCceEEEEE
Q 046623 127 MVIMSDVFYD---PE--E--MVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 127 ~Iv~~~~~~~---~~--~--~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
+|+++.+.+. .. . ..++++.+.++|+|||.+++...
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9999655432 11 1 47899999999999995555443
No 242
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.23 E-value=1.6e-11 Score=99.12 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=74.5
Q ss_pred CCCeEEEECCCCCH----HHHHHHHh-C----CCeEEEecCcc-hHHHHHHHHHH-----------------------hC
Q 046623 53 QNKSVLELGAGAGL----PGLTAARL-G----ATRVVLTDVKP-LLPGLINNVEA-----------------------NG 99 (218)
Q Consensus 53 ~~~~vLDlG~G~G~----~~~~l~~~-~----~~~v~~~D~~~-~~~~a~~~~~~-----------------------~~ 99 (218)
++.+|||+|||+|. +++.+++. + ..+|+++|+|+ +++.|+++... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999997 56666544 4 23899999999 99999987410 00
Q ss_pred -------CCCceEEEEeecCCCCccccccCCCCcEEEEcccccCCcc--hHHHHHHHHHHhcCCC
Q 046623 100 -------LGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEE--MVGLGKTLKRVCGTGR 155 (218)
Q Consensus 100 -------~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~--~~~~l~~~~~lL~~gG 155 (218)
+..++.|...|+.+... ...++||+|+|.+++.+.+. ..++++.+.+.|+|||
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~---~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG 246 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQY---NVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDG 246 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSC---CCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCC---CcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCc
Confidence 01358899988876432 02468999999998866543 4889999999999999
No 243
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.22 E-value=1.9e-11 Score=98.29 Aligned_cols=117 Identities=15% Similarity=0.016 Sum_probs=76.5
Q ss_pred cchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHH-HHhCCCCceEEE--Eeec
Q 046623 35 LWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNV-EANGLGGRVEVR--ELVW 111 (218)
Q Consensus 35 ~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~ 111 (218)
.-.++..+...+......++.+|||+|||+|.++..+++. .+|+++|++++...++.+. .......++.++ .+|+
T Consensus 56 ~sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~ 133 (265)
T 2oxt_A 56 VSRGTAKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDI 133 (265)
T ss_dssp SSTHHHHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCT
T ss_pred cchHHHHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCH
Confidence 3356666777666533356789999999999999999877 4899999998322221110 000000147777 7777
Q ss_pred CCCCccccccCCCCcEEEEcccccCCcch-------HHHHHHHHHHhcCCC--ceEEE
Q 046623 112 GSDDLSQLSELGEFDMVIMSDVFYDPEEM-------VGLGKTLKRVCGTGR--HTVVW 160 (218)
Q Consensus 112 ~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~-------~~~l~~~~~lL~~gG--~~~i~ 160 (218)
... +.++||+|+++.. +..... ..+++.+.++|+||| .+++-
T Consensus 134 ~~l------~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 134 HTL------PVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp TTS------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred hHC------CCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 653 3468999999655 322211 137888999999999 55553
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.21 E-value=6.4e-11 Score=96.82 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=61.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+. +|+++|+++ +++.+++++..++. .+++++.+|+.+.. .++||+|++
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~------~~~~D~Vv~ 112 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTV------FPKFDVCTA 112 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSC------CCCCSEEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCC------cccCCEEEE
Confidence 5678999999999999999987754 999999999 99999999987766 45899998887653 247999999
Q ss_pred cccccC
Q 046623 131 SDVFYD 136 (218)
Q Consensus 131 ~~~~~~ 136 (218)
+.|++.
T Consensus 113 n~py~~ 118 (299)
T 2h1r_A 113 NIPYKI 118 (299)
T ss_dssp ECCGGG
T ss_pred cCCccc
Confidence 877653
No 245
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.19 E-value=5.5e-11 Score=98.61 Aligned_cols=102 Identities=18% Similarity=0.119 Sum_probs=76.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHh--CC-CCceEEEEeecCCCCccccccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEAN--GL-GGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
.++.+|||||||+|..+..+++.. ..+|+++|+++ +++.+++++... ++ ..+++++.+|+.+.... ...++||
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~--~~~~~fD 196 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN--AAEGSYD 196 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT--SCTTCEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh--ccCCCcc
Confidence 356799999999999999998663 46999999999 999999998653 33 24689998886543110 0246899
Q ss_pred EEEEccc--ccCCcc--hHHHHHHHHHHhcCCC
Q 046623 127 MVIMSDV--FYDPEE--MVGLGKTLKRVCGTGR 155 (218)
Q Consensus 127 ~Iv~~~~--~~~~~~--~~~~l~~~~~lL~~gG 155 (218)
+|+++.+ .+.... ...+++.+.++|+|||
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG 229 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGG 229 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCc
Confidence 9998543 211111 4789999999999999
No 246
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.19 E-value=2.8e-11 Score=99.21 Aligned_cols=105 Identities=11% Similarity=-0.010 Sum_probs=76.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHH--hCC-CCceEEEEeecCCCCccccccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEA--NGL-GGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
.++.+|||+|||+|..+..+++.+ ..+++++|+++ +++.+++++.. .++ ..+++++.+|..+... ...++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~---~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK---QNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH---TCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh---hCCCCce
Confidence 356799999999999999998764 46999999999 99999999865 233 3568999877643211 1346899
Q ss_pred EEEEcccccCC----cchHHHHHHHHHHhcCCCceEE
Q 046623 127 MVIMSDVFYDP----EEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 127 ~Iv~~~~~~~~----~~~~~~l~~~~~lL~~gG~~~i 159 (218)
+|+++.+.... ....++++.+.++|+|||.+++
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 99985543211 1236789999999999993333
No 247
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.19 E-value=2.3e-10 Score=93.85 Aligned_cols=142 Identities=13% Similarity=0.160 Sum_probs=92.7
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHh--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARL--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
+++.+..++. ..++.+|||+|||+|..+..++.. +..+|+++|+++ +++.+++|++.+++. ++.++..|+...
T Consensus 90 ~s~l~~~~l~---~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~ 165 (309)
T 2b9e_A 90 ASCLPAMLLD---PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAV 165 (309)
T ss_dssp GGGHHHHHHC---CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGS
T ss_pred HHHHHHHHhC---CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhc
Confidence 3344444443 246789999999999999998753 346999999999 999999999999875 488998887654
Q ss_pred CccccccCCCCcEEEEcccccCC-----------------cch-------HHHHHHHHHHhcCCCceEEEEE-eeccCCh
Q 046623 115 DLSQLSELGEFDMVIMSDVFYDP-----------------EEM-------VGLGKTLKRVCGTGRHTVVWAV-SEVRTRT 169 (218)
Q Consensus 115 ~~~~~~~~~~~D~Iv~~~~~~~~-----------------~~~-------~~~l~~~~~lL~~gG~~~i~~~-~~~~~~~ 169 (218)
.... ....+||.|++++|+... ++. .++++.+.++++ || .+++.+ +......
T Consensus 166 ~~~~-~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG-~lvYsTCs~~~~En 242 (309)
T 2b9e_A 166 SPSD-PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQ-RLVYSTCSLCQEEN 242 (309)
T ss_dssp CTTC-GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CC-EEEEEESCCCGGGT
T ss_pred Cccc-cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CC-EEEEECCCCChHHh
Confidence 3210 012579999998776321 111 235666666665 77 444443 3333344
Q ss_pred HHHHHHHHHhC-C-cEEEE
Q 046623 170 GDCLHELIMSQ-G-FRVIE 186 (218)
Q Consensus 170 ~~~~~~~~~~~-g-f~~~~ 186 (218)
++.+..++.++ + |....
T Consensus 243 e~~v~~~l~~~~~~~~~~~ 261 (309)
T 2b9e_A 243 EDVVRDALQQNPGAFRLAP 261 (309)
T ss_dssp HHHHHHHHTTSTTTEEECC
T ss_pred HHHHHHHHHhCCCcEEEec
Confidence 55666665554 3 65543
No 248
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.18 E-value=6.5e-11 Score=97.15 Aligned_cols=106 Identities=17% Similarity=0.037 Sum_probs=77.5
Q ss_pred CCeEEEECCCCCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 54 NKSVLELGAGAGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
..+|||||||+|.++..+++ .+..+++++|+++ +++.+++++.... ..+++++.+|....... ...++||+|+++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~--~~~~~fDvIi~D 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAES--FTPASRDVIIRD 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHT--CCTTCEEEEEEC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhh--ccCCCCCEEEEC
Confidence 45999999999999999987 4555999999999 9999999875432 35689998876543210 134689999985
Q ss_pred ccccC--Cc--chHHHHHHHHHHhcCCCceEEEEE
Q 046623 132 DVFYD--PE--EMVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 132 ~~~~~--~~--~~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
..... .. ...++++.+.++|+|||.+++...
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 32221 11 137899999999999995544443
No 249
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.18 E-value=2.5e-11 Score=99.86 Aligned_cols=100 Identities=14% Similarity=0.073 Sum_probs=72.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHh--CC-CCceEEEEeecCCCCccccccCCCCcE
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEAN--GL-GGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
++.+|||||||+|..+..+++. +..+++++|+++ +++.+++++... +. ..+++++.+|...... ...++||+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~---~~~~~fD~ 184 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK---NHKNEFDV 184 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH---HCTTCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH---hcCCCceE
Confidence 4579999999999999999866 346999999999 999999988653 22 3568888877654211 13568999
Q ss_pred EEEcccccCC--cc-h-HHHHHHHHHHhcCCC
Q 046623 128 VIMSDVFYDP--EE-M-VGLGKTLKRVCGTGR 155 (218)
Q Consensus 128 Iv~~~~~~~~--~~-~-~~~l~~~~~lL~~gG 155 (218)
|+++.+.... .. . .++++.+.++|+|||
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG 216 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDG 216 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEE
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCe
Confidence 9985432211 11 1 789999999999999
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.15 E-value=4.4e-10 Score=91.52 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=69.3
Q ss_pred HHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 41 ILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 41 ~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
.+...+......++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.+++++... .+++++.+|+.+...
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~--- 110 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDL--- 110 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCG---
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCc---
Confidence 33334333334567899999999999999998885 4999999999 999999998732 459999999887654
Q ss_pred ccCCCCcEEEEcccccC
Q 046623 120 SELGEFDMVIMSDVFYD 136 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~ 136 (218)
+..+||.|++|.|++.
T Consensus 111 -~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 111 -NKLDFNKVVANLPYQI 126 (295)
T ss_dssp -GGSCCSEEEEECCGGG
T ss_pred -ccCCccEEEEeCcccc
Confidence 4457999999877653
No 251
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.13 E-value=7.7e-11 Score=95.62 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=76.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhC--C-CCceEEEEeecCCCCccccccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANG--L-GGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
.++.+|||+|||+|..+..+++.. ..+++++|+++ +++.+++++...+ . ..+++++.+|..+.... ..++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~---~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN---VTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH---CCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh---CCCCce
Confidence 356799999999999999998663 46999999999 9999999876432 1 25688888776543210 256899
Q ss_pred EEEEcccccC--Ccch--HHHHHHHHHHhcCCCce
Q 046623 127 MVIMSDVFYD--PEEM--VGLGKTLKRVCGTGRHT 157 (218)
Q Consensus 127 ~Iv~~~~~~~--~~~~--~~~l~~~~~lL~~gG~~ 157 (218)
+|+++.+... .... .++++.+.++|+|||.+
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~l 188 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYC 188 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEE
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 9998543221 1122 68999999999999933
No 252
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.13 E-value=3e-10 Score=94.91 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=88.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
+..+|||+|||+|..+..+++.. ..+++++|++.+++.+++ . .+++++.+|+.+ .. + .||+|+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~----~--~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-ENLNFVGGDMFK-SI----P--SADAVLLK 258 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-SSEEEEECCTTT-CC----C--CCSEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-CCcEEEeCccCC-CC----C--CceEEEEc
Confidence 45799999999999999997663 458999999337665543 1 348999988876 32 2 49999999
Q ss_pred ccccCCcchH--HHHHHHHHHhcC---CCceEEEEEeec--c-----------------------CChHHHHHHHHHhCC
Q 046623 132 DVFYDPEEMV--GLGKTLKRVCGT---GRHTVVWAVSEV--R-----------------------TRTGDCLHELIMSQG 181 (218)
Q Consensus 132 ~~~~~~~~~~--~~l~~~~~lL~~---gG~~~i~~~~~~--~-----------------------~~~~~~~~~~~~~~g 181 (218)
.++|+..+.. .+++++.+.|+| ||.+++.-.... . ....+.+..++++.|
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 338 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAG 338 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTT
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcC
Confidence 9999887766 999999999999 995555422111 0 113344556668899
Q ss_pred cEEEEE
Q 046623 182 FRVIEL 187 (218)
Q Consensus 182 f~~~~~ 187 (218)
|...++
T Consensus 339 f~~~~~ 344 (358)
T 1zg3_A 339 FSSYKI 344 (358)
T ss_dssp CCEEEE
T ss_pred CCeeEE
Confidence 998876
No 253
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.11 E-value=5e-10 Score=98.52 Aligned_cols=110 Identities=14% Similarity=0.042 Sum_probs=82.8
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh----C---------------CCeEEEecCcc-hHHHHHHHHHHhCCCC----ceEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL----G---------------ATRVVLTDVKP-LLPGLINNVEANGLGG----RVEVR 107 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~----~---------------~~~v~~~D~~~-~~~~a~~~~~~~~~~~----~~~~~ 107 (218)
.++.+|+|.+||+|.+.+.+++. + ..+++|+|+++ ++..|+.|+...++.. ...+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 45679999999999998887543 1 13799999999 9999999998888754 26777
Q ss_pred EeecCCCCccccccCCCCcEEEEcccccCCcc--------------hHHHHHHHHHHhcCCCceEEEEEee
Q 046623 108 ELVWGSDDLSQLSELGEFDMVIMSDVFYDPEE--------------MVGLGKTLKRVCGTGRHTVVWAVSE 164 (218)
Q Consensus 108 ~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~--------------~~~~l~~~~~lL~~gG~~~i~~~~~ 164 (218)
.+|...... ....+||+|++|+|+..... ...++..+.++|+|||++.+++...
T Consensus 248 ~gDtL~~~~---~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 248 LGNTLGSDG---ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp ESCTTSHHH---HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred eCCCccccc---ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 777544321 13468999999999865322 2368899999999999777776544
No 254
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.11 E-value=1.7e-10 Score=94.47 Aligned_cols=111 Identities=13% Similarity=0.006 Sum_probs=71.2
Q ss_pred hhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecC----cc-hHHHHHHHHHHhCCCCceEEEEe-e
Q 046623 37 DSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDV----KP-LLPGLINNVEANGLGGRVEVREL-V 110 (218)
Q Consensus 37 ~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~----~~-~~~~a~~~~~~~~~~~~~~~~~~-d 110 (218)
.+...|...+......++.+|||+|||+|.++..+++. .+|+++|+ ++ .+..+. ....+ .+++.++.+ |
T Consensus 66 R~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D 140 (305)
T 2p41_A 66 RGSAKLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVD 140 (305)
T ss_dssp THHHHHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCC
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccc
Confidence 45566666665522346789999999999999999877 38999998 44 332111 00111 134788776 6
Q ss_pred cCCCCccccccCCCCcEEEEccccc--C-CcchH---HHHHHHHHHhcCCCceE
Q 046623 111 WGSDDLSQLSELGEFDMVIMSDVFY--D-PEEMV---GLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 111 ~~~~~~~~~~~~~~~D~Iv~~~~~~--~-~~~~~---~~l~~~~~lL~~gG~~~ 158 (218)
.... +.++||+|+++..+. + ..+.. .++..+.++|+|||.++
T Consensus 141 ~~~l------~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v 188 (305)
T 2p41_A 141 VFFI------PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFC 188 (305)
T ss_dssp TTTS------CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEE
T ss_pred cccC------CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEE
Confidence 5543 346899999965542 1 01111 46788889999999433
No 255
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.09 E-value=7.4e-09 Score=90.96 Aligned_cols=170 Identities=13% Similarity=0.017 Sum_probs=110.6
Q ss_pred hhHHHHHHHHhcCC-CCCCCeEEEECCCCCHHHHHHHHh----CCCeEEEecCcc-hHHHHHHHHHHhCCC-CceEEEEe
Q 046623 37 DSALILAQFISTHF-DFQNKSVLELGAGAGLPGLTAARL----GATRVVLTDVKP-LLPGLINNVEANGLG-GRVEVREL 109 (218)
Q Consensus 37 ~~~~~l~~~l~~~~-~~~~~~vLDlG~G~G~~~~~l~~~----~~~~v~~~D~~~-~~~~a~~~~~~~~~~-~~~~~~~~ 109 (218)
+-...|.+++.... ..++.+|+|.+||+|.+.+.+++. +..+++|+|+++ ++..++.|+...++. ..+.+..+
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~g 283 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEec
Confidence 34455555554321 246779999999999998888655 245899999999 999999999998875 35788888
Q ss_pred ecCCCCccccccCCCCcEEEEcccccCCc--------c---------------hHHHHHHHHHHhc-CCCceEEEEEeec
Q 046623 110 VWGSDDLSQLSELGEFDMVIMSDVFYDPE--------E---------------MVGLGKTLKRVCG-TGRHTVVWAVSEV 165 (218)
Q Consensus 110 d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~--------~---------------~~~~l~~~~~lL~-~gG~~~i~~~~~~ 165 (218)
|.....+.. ....+||+|++|||+.... + --.++..+.+.|+ +||++.+++....
T Consensus 284 DtL~~d~p~-~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 284 DTLDEDWPT-QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp CTTTSCSCC-SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred ceecccccc-cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 876552111 1457899999999985311 0 0137888999999 9997777766543
Q ss_pred --cCChHHHHHHHHHhCCcEEEEE--EccCCCCCCCceeEEEecCC
Q 046623 166 --RTRTGDCLHELIMSQGFRVIEL--TCQLGGGCPEAFAVYELIPP 207 (218)
Q Consensus 166 --~~~~~~~~~~~~~~~gf~~~~~--~~~~~~~~~~~~~l~~~~~~ 207 (218)
+......++..+.+.+.-...+ |-....+...-..++-+.+.
T Consensus 363 Lf~~~~~~~iRk~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~ 408 (542)
T 3lkd_A 363 LFRGNAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKN 408 (542)
T ss_dssp HHCCTHHHHHHHHHHHTTCEEEEEECCSSCSSSCCCCEEEEEECSS
T ss_pred hhCCchhHHHHHHHHhCCceeEEEEccccccCCCCCcEEEEEEecC
Confidence 2233344444434444332222 44333355555566666554
No 256
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.09 E-value=2.3e-09 Score=97.02 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=86.5
Q ss_pred HHHHHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhC------------------------------------------
Q 046623 39 ALILAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLG------------------------------------------ 75 (218)
Q Consensus 39 ~~~l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~------------------------------------------ 75 (218)
...|+..+.. ..-.++.++||.+||+|.+.+.++..+
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 3445555544 222467799999999999999886542
Q ss_pred -CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCC----cchHHHHHHHHH
Q 046623 76 -ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDP----EEMVGLGKTLKR 149 (218)
Q Consensus 76 -~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~----~~~~~~l~~~~~ 149 (218)
..+++|+|+++ +++.|+.|+...|+.+.+++..+|+.+.... ...++||+|++|+|+... .....+...+.+
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~--~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP--LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS--CTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc--cccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 13799999999 9999999999999988899999988764320 012389999999998642 234555555554
Q ss_pred Hh---cCCCceEEEE
Q 046623 150 VC---GTGRHTVVWA 161 (218)
Q Consensus 150 lL---~~gG~~~i~~ 161 (218)
.+ .|||.+.+++
T Consensus 333 ~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 333 IMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHCTTCEEEEEE
T ss_pred HHHhhCCCCeEEEEe
Confidence 44 4788665553
No 257
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.05 E-value=8.1e-11 Score=99.00 Aligned_cols=93 Identities=18% Similarity=0.105 Sum_probs=68.6
Q ss_pred CCCCeEEEECCC------CCHHHHHHHH-h-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c-c
Q 046623 52 FQNKSVLELGAG------AGLPGLTAAR-L-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L-S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G------~G~~~~~l~~-~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~-~ 120 (218)
.++.+||||||| +|..++.+++ . +..+|+++|+++ +. . ...+++++.+|..+..... + .
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~--~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V--DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G--CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h--cCCCcEEEEecccccchhhhhhc
Confidence 356799999999 6766666653 3 456999999999 72 1 1256999999987654310 0 0
Q ss_pred cCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 121 ELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
..++||+|+++. .++..+....++.+.++|||||
T Consensus 285 ~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGG 318 (419)
T 3sso_A 285 RYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGG 318 (419)
T ss_dssp HHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEE
T ss_pred ccCCccEEEECC-cccchhHHHHHHHHHHhcCCCe
Confidence 157899999854 4555678899999999999999
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.05 E-value=2.1e-10 Score=95.41 Aligned_cols=111 Identities=17% Similarity=0.077 Sum_probs=77.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC---CC----CceEEEEeecCCCCccccccCCC
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG---LG----GRVEVRELVWGSDDLSQLSELGE 124 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~---~~----~~~~~~~~d~~~~~~~~~~~~~~ 124 (218)
++++||+||||+|..+..+++.++.+|+++|+++ +++.+++++...+ .. .+++++.+|............++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 5789999999999999999888778999999999 9999999975322 22 25888888765532210013578
Q ss_pred CcEEEEcccc---cCCc---chHHHHHHH----HHHhcCCCceEEEEEe
Q 046623 125 FDMVIMSDVF---YDPE---EMVGLGKTL----KRVCGTGRHTVVWAVS 163 (218)
Q Consensus 125 ~D~Iv~~~~~---~~~~---~~~~~l~~~----~~lL~~gG~~~i~~~~ 163 (218)
||+|++..+- .... ....+++.+ .++|+|||.+++..+.
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999996532 1111 224555665 8999999944444443
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=6.6e-10 Score=88.76 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=63.8
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.+++++.. ..+++++.+|+.+.........++|| |+
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~-vv 101 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVKTDKPLR-VV 101 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSCCSSCEE-EE
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhccCCCeE-EE
Confidence 3567899999999999999998876 4999999999 99999998865 24699999999887653322235677 88
Q ss_pred Eccccc
Q 046623 130 MSDVFY 135 (218)
Q Consensus 130 ~~~~~~ 135 (218)
+|.|++
T Consensus 102 ~NlPY~ 107 (255)
T 3tqs_A 102 GNLPYN 107 (255)
T ss_dssp EECCHH
T ss_pred ecCCcc
Confidence 877764
No 260
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.03 E-value=2.2e-10 Score=91.91 Aligned_cols=95 Identities=13% Similarity=0.041 Sum_probs=72.5
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh--CC-CCceEEEEeecCCCCccccccCCCCcEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEAN--GL-GGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.+.+|||+|||+|..+..+++.+ .+++++|+++ +++.+++++... +. .++++++.+|.... . ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~------~-~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD------I-KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC------C-CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH------H-hhCCEE
Confidence 45799999999999999887666 7999999999 999988776431 11 24688887775442 2 679999
Q ss_pred EEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 129 IMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 129 v~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+++. .++..+++.+.++|+|||.+++.
T Consensus 144 i~d~-----~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 144 FCLQ-----EPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EESS-----CCCHHHHHHHHTTEEEEEEEEEE
T ss_pred EECC-----CChHHHHHHHHHhcCCCcEEEEE
Confidence 9852 23456899999999999944443
No 261
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.03 E-value=5.5e-10 Score=94.63 Aligned_cols=119 Identities=8% Similarity=-0.048 Sum_probs=82.9
Q ss_pred hhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh--CCCCceEEEEeecCC
Q 046623 37 DSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEAN--GLGGRVEVRELVWGS 113 (218)
Q Consensus 37 ~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~--~~~~~~~~~~~d~~~ 113 (218)
.+...++.+..... .++.+|||+|||+|..++.+++.+. +|+++|+++ +++.++.|++.+ ++ .+++++.+|+.+
T Consensus 78 at~e~vA~~~a~~l-~~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~ 154 (410)
T 3ll7_A 78 SSGAVTSSYKSRFI-REGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKE 154 (410)
T ss_dssp SCCHHHHHHGGGGS-CTTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGG
T ss_pred cCHHHHHHHHHHhc-CCCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHH
Confidence 34555666643311 1378999999999999999988765 999999999 999999999988 77 569999988865
Q ss_pred CCccccccCCCCcEEEEcccccCC--------cchHHHHHHHHHHhcCCCceEEE
Q 046623 114 DDLSQLSELGEFDMVIMSDVFYDP--------EEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 114 ~~~~~~~~~~~~D~Iv~~~~~~~~--------~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.... ....+||+|+++++.... ++..+-+..+...|...+..+++
T Consensus 155 ~L~~--~~~~~fDvV~lDPPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~v 207 (410)
T 3ll7_A 155 YLPL--IKTFHPDYIYVDPARRSGADKRVYAIADCEPDLIPLATELLPFCSSILA 207 (410)
T ss_dssp SHHH--HHHHCCSEEEECCEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEE
T ss_pred hhhh--ccCCCceEEEECCCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEE
Confidence 4210 023579999998877542 23444555566555444333444
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.03 E-value=2.3e-09 Score=85.02 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=63.1
Q ss_pred HHHHHhc-CCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc
Q 046623 42 LAQFIST-HFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL 119 (218)
Q Consensus 42 l~~~l~~-~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (218)
+.+.+.. ....++.+|||+|||+|.++..++..+ .+|+++|+++ +++.+++++... .+++++.+|+.+....
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~-- 91 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFP-- 91 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCC--
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcc--
Confidence 4444443 333567899999999999999999887 4999999999 999999887542 4689999888765431
Q ss_pred ccCCCCcEEEEccccc
Q 046623 120 SELGEFDMVIMSDVFY 135 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~ 135 (218)
....| .|++|.|++
T Consensus 92 -~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 92 -KNQSY-KIFGNIPYN 105 (244)
T ss_dssp -SSCCC-EEEEECCGG
T ss_pred -cCCCe-EEEEeCCcc
Confidence 12334 577776664
No 263
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.03 E-value=6e-10 Score=83.59 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=79.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||. +.+|+++ +++.++++... ++++..+|+.+.... ..+.++||+|++
T Consensus 11 ~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~-~~~~~~fD~V~~ 69 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQS-AHKESSFDIILS 69 (176)
T ss_dssp CTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGG-CCCSSCEEEEEE
T ss_pred CCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccc-cCCCCCEeEEEE
Confidence 4678999999986 2389999 99998877532 378888888754320 013578999999
Q ss_pred cccccCC-cchHHHHHHHHHHhcCCCceEEEEEeec------cCChHHHHHHHHHhCCcEEE
Q 046623 131 SDVFYDP-EEMVGLGKTLKRVCGTGRHTVVWAVSEV------RTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 131 ~~~~~~~-~~~~~~l~~~~~lL~~gG~~~i~~~~~~------~~~~~~~~~~~~~~~gf~~~ 185 (218)
+.++++. .+...+++++.++|||||.+++...... .....+.+...+.+.|| +.
T Consensus 70 ~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 70 GLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp CCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred CChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 9999987 8899999999999999995554221110 01113344444499999 54
No 264
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.01 E-value=4.9e-09 Score=85.08 Aligned_cols=126 Identities=17% Similarity=0.122 Sum_probs=78.9
Q ss_pred HHHHHHhc--CCCCCCCeEEEECCCC------CHHHHHHHHhC-CCeEEEecCcchHHHHHHHHHHhCCCCceEE-EEee
Q 046623 41 ILAQFIST--HFDFQNKSVLELGAGA------GLPGLTAARLG-ATRVVLTDVKPLLPGLINNVEANGLGGRVEV-RELV 110 (218)
Q Consensus 41 ~l~~~l~~--~~~~~~~~vLDlG~G~------G~~~~~l~~~~-~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~-~~~d 110 (218)
.+..++.. ....++.+|||+|||+ |. ...+...+ ..+|+++|+++. + .++++ +.+|
T Consensus 49 ~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~------------v-~~v~~~i~gD 114 (290)
T 2xyq_A 49 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF------------V-SDADSTLIGD 114 (290)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC------------B-CSSSEEEESC
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC------------C-CCCEEEEECc
Confidence 35556631 2235678999999955 55 22223444 358999999986 1 23778 8888
Q ss_pred cCCCCccccccCCCCcEEEEcccccC-----------CcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHh
Q 046623 111 WGSDDLSQLSELGEFDMVIMSDVFYD-----------PEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMS 179 (218)
Q Consensus 111 ~~~~~~~~~~~~~~~D~Iv~~~~~~~-----------~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~ 179 (218)
+.+.. ..++||+|+++..... ......+++.+.++|+|||.+++.... .....+....+ ++
T Consensus 115 ~~~~~-----~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~--~~~~~~l~~~l-~~ 186 (290)
T 2xyq_A 115 CATVH-----TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE--HSWNADLYKLM-GH 186 (290)
T ss_dssp GGGCC-----CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS--SSCCHHHHHHH-TT
T ss_pred cccCC-----ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec--cCCHHHHHHHH-HH
Confidence 86543 2367999999643211 122457899999999999944443322 23334544444 77
Q ss_pred CCcEEEEEE
Q 046623 180 QGFRVIELT 188 (218)
Q Consensus 180 ~gf~~~~~~ 188 (218)
.||...++.
T Consensus 187 ~GF~~v~~~ 195 (290)
T 2xyq_A 187 FSWWTAFVT 195 (290)
T ss_dssp EEEEEEEEE
T ss_pred cCCcEEEEE
Confidence 778765554
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.01 E-value=5.1e-10 Score=99.45 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=75.5
Q ss_pred CCCCeEEEECCCCCHHHHHH---HHhCCC--eEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTA---ARLGAT--RVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l---~~~~~~--~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
.++..|+|+|||+|.++..+ ++.++. +|+++|.|+++..+++..+.|++.++++++.+|+++... .+++|
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~L-----PEKVD 430 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVA-----PEKAD 430 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCC-----SSCEE
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccC-----CcccC
Confidence 44568999999999995554 344333 689999999666788888999999999999999987653 47899
Q ss_pred EEEEcccccC---CcchHHHHHHHHHHhcCCC
Q 046623 127 MVIMSDVFYD---PEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 127 ~Iv~~~~~~~---~~~~~~~l~~~~~lL~~gG 155 (218)
+||+ ..+.+ .+.+..++....++|||||
T Consensus 431 IIVS-EwMG~fLl~E~mlevL~Ardr~LKPgG 461 (637)
T 4gqb_A 431 IIVS-ELLGSFADNELSPECLDGAQHFLKDDG 461 (637)
T ss_dssp EEEC-CCCBTTBGGGCHHHHHHHHGGGEEEEE
T ss_pred EEEE-EcCcccccccCCHHHHHHHHHhcCCCc
Confidence 9996 33222 1334578888899999999
No 266
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.00 E-value=2.6e-09 Score=93.96 Aligned_cols=150 Identities=11% Similarity=0.003 Sum_probs=96.6
Q ss_pred CeEEEECCCCCHHHHHHHHh--------C--------CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc
Q 046623 55 KSVLELGAGAGLPGLTAARL--------G--------ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS 117 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~--------~--------~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (218)
.+|+|.+||+|.+.+.+++. . ..+++|+|+++ ++..|+.|+...++...+.+..+|......
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~- 324 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ- 324 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS-
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc-
Confidence 39999999999988876422 0 24799999999 999999999998876544445666543321
Q ss_pred ccccCCCCcEEEEcccccCCc-----------------------c------hHHHHHHHHHHhcCCCceEEEEEeec--c
Q 046623 118 QLSELGEFDMVIMSDVFYDPE-----------------------E------MVGLGKTLKRVCGTGRHTVVWAVSEV--R 166 (218)
Q Consensus 118 ~~~~~~~~D~Iv~~~~~~~~~-----------------------~------~~~~l~~~~~lL~~gG~~~i~~~~~~--~ 166 (218)
....+||+|++|+|+.... . .-.++..+.+.|++||++.+++.... +
T Consensus 325 --~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~ 402 (544)
T 3khk_A 325 --HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSS 402 (544)
T ss_dssp --CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHC
T ss_pred --cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhc
Confidence 1346899999999986420 0 01588889999999997777765443 2
Q ss_pred C-ChHHHHHHHHHhCCcEEEEE--EccCCCCCCCceeEEEecCC
Q 046623 167 T-RTGDCLHELIMSQGFRVIEL--TCQLGGGCPEAFAVYELIPP 207 (218)
Q Consensus 167 ~-~~~~~~~~~~~~~gf~~~~~--~~~~~~~~~~~~~l~~~~~~ 207 (218)
. .....++..+.+.+.-...+ |-....+......++-+.+.
T Consensus 403 ~~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~ 446 (544)
T 3khk_A 403 NTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKD 446 (544)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESC
T ss_pred CcchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecC
Confidence 2 23344444434444432222 43333344444555666544
No 267
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.00 E-value=2.1e-11 Score=96.84 Aligned_cols=77 Identities=13% Similarity=0.147 Sum_probs=60.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++.+|||+|||+|.++..+++.+ .+++++|+++ +++.++++... ..+++++.+|+.+.... ..++| .|++
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~---~~~~f-~vv~ 99 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL---NTRVTLIHQDILQFQFP---NKQRY-KIVG 99 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT---CSEEEECCSCCTTTTCC---CSSEE-EEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc---CCceEEEECChhhcCcc---cCCCc-EEEE
Confidence 467799999999999999998887 5999999999 99888877642 24688998888765431 12568 7888
Q ss_pred cccccC
Q 046623 131 SDVFYD 136 (218)
Q Consensus 131 ~~~~~~ 136 (218)
|.|++.
T Consensus 100 n~Py~~ 105 (245)
T 1yub_A 100 NIPYHL 105 (245)
T ss_dssp ECCSSS
T ss_pred eCCccc
Confidence 777654
No 268
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.97 E-value=2.7e-09 Score=85.67 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=72.3
Q ss_pred CeEEEECCCCC---HHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc--cccccCCCCc-
Q 046623 55 KSVLELGAGAG---LPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL--SQLSELGEFD- 126 (218)
Q Consensus 55 ~~vLDlG~G~G---~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~~D- 126 (218)
.+|||||||++ .....+.+ .+..+|+++|.|+ ++..+++.+.... ..++.++.+|+.+... ..-...+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccCc
Confidence 58999999973 33333333 3446999999999 9999998875532 2358999999876421 0000023344
Q ss_pred ----EEEEcccccCCcc---hHHHHHHHHHHhcCCCceE
Q 046623 127 ----MVIMSDVFYDPEE---MVGLGKTLKRVCGTGRHTV 158 (218)
Q Consensus 127 ----~Iv~~~~~~~~~~---~~~~l~~~~~lL~~gG~~~ 158 (218)
.|+++.++|+..+ +..++..+.+.|+|||.++
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lv 197 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLA 197 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEE
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEE
Confidence 5788899998766 5689999999999999333
No 269
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.94 E-value=2.9e-09 Score=85.70 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=62.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.++ +|||+|||+|.++..+++.+. +|+++|+++ +++.+++++.. .+++++.+|+.+.... ....+|.|++
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~---~~~~~~~iv~ 116 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWE---EVPQGSLLVA 116 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGG---GSCTTEEEEE
T ss_pred CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChh---hccCccEEEe
Confidence 456 999999999999999998874 899999999 99999988752 4599999998776542 1136899999
Q ss_pred cccccC
Q 046623 131 SDVFYD 136 (218)
Q Consensus 131 ~~~~~~ 136 (218)
|.|++-
T Consensus 117 NlPy~i 122 (271)
T 3fut_A 117 NLPYHI 122 (271)
T ss_dssp EECSSC
T ss_pred cCcccc
Confidence 888754
No 270
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.87 E-value=2.4e-08 Score=76.70 Aligned_cols=100 Identities=17% Similarity=0.122 Sum_probs=73.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCC--CCceEEEEeecCCCC-------------c
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGL--GGRVEVRELVWGSDD-------------L 116 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~-------------~ 116 (218)
+.++|||+|| |..++.+++....+|+.+|.++ ..+.++++++..+. .++++++.+|..+.. .
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4569999998 5677777765346999999999 99999999999987 778999998865431 0
Q ss_pred cc-------cccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEE
Q 046623 117 SQ-------LSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWA 161 (218)
Q Consensus 117 ~~-------~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~ 161 (218)
.. ....++||+|++... .....+..+.++|+||| +++.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG--~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPV--TLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCE--EEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCe--EEEE
Confidence 00 012368999999543 23466777789999999 4443
No 271
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.87 E-value=5.5e-08 Score=87.97 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=75.1
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC----CCeEEEecCcc-hHHHH--HHHHHHhCCCCc---eEEEEeecCCCCcccccc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG----ATRVVLTDVKP-LLPGL--INNVEANGLGGR---VEVRELVWGSDDLSQLSE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~----~~~v~~~D~~~-~~~~a--~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~ 121 (218)
.++.+|||.|||+|.+.+.+++.. ..+++|+|+++ ++..| +.|+..+.+... ..+...|+.... ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~---~~~ 396 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN---PED 396 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC---GGG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc---ccc
Confidence 357799999999999999987643 24799999999 99988 555544332211 233333333211 114
Q ss_pred CCCCcEEEEcccccCC-c----------------------------chHHHHHHHHHHhcCCCceEEEEEeec
Q 046623 122 LGEFDMVIMSDVFYDP-E----------------------------EMVGLGKTLKRVCGTGRHTVVWAVSEV 165 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~-~----------------------------~~~~~l~~~~~lL~~gG~~~i~~~~~~ 165 (218)
..+||+|++|+|+... . ....+++.+.++|++||++.+++....
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 5689999999998431 0 133477888999999997776665543
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.86 E-value=2.6e-09 Score=95.10 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=72.1
Q ss_pred CCeEEEECCCCCHHHHHH---HH-hC----------CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-
Q 046623 54 NKSVLELGAGAGLPGLTA---AR-LG----------ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS- 117 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l---~~-~~----------~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 117 (218)
+..|||+|||+|.++..+ ++ .+ +.+|+++|.|+ +...++... .|++.++++++.+|+++....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHH-hcCCCCeEEEEeCchhhccccc
Confidence 458999999999997543 22 22 23999999999 766555544 488888899999998766430
Q ss_pred ccccCCCCcEEEEcccccC---CcchHHHHHHHHHHhcCCC
Q 046623 118 QLSELGEFDMVIMSDVFYD---PEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 118 ~~~~~~~~D~Iv~~~~~~~---~~~~~~~l~~~~~lL~~gG 155 (218)
.....+++|+||+ ..+.+ .+...+++..+.+.|+|||
T Consensus 489 ~~~~~ekVDIIVS-ElmGsfl~nEL~pe~Ld~v~r~Lkp~G 528 (745)
T 3ua3_A 489 KDRGFEQPDIIVS-ELLGSFGDNELSPECLDGVTGFLKPTT 528 (745)
T ss_dssp HHTTCCCCSEEEE-CCCBTTBGGGSHHHHHHTTGGGSCTTC
T ss_pred ccCCCCcccEEEE-eccccccchhccHHHHHHHHHhCCCCc
Confidence 0001578999998 33333 2455678888899999999
No 273
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.85 E-value=1e-09 Score=88.03 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=106.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
..+..+||+.+|||.+++.+.+ +..+++.+|.++ +++.+++|++. ..++.+...|..........+..+||+|++
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred hcCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 4566899999999999999877 447999999999 99999999865 256888877743322111123457999999
Q ss_pred cccccCCcchHHHHHHHHH--HhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEccCCC---CCCCceeEEEec
Q 046623 131 SDVFYDPEEMVGLGKTLKR--VCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQLGG---GCPEAFAVYELI 205 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~--lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~~~---~~~~~~~l~~~~ 205 (218)
.+|+....+..++++.+.+ .+.++|.+++|-....+.....+.+.+ ++.+.++..+.....+ .....-=++-+.
T Consensus 166 DPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l-~~~~~~~l~~el~~~~~~~~gm~gsGm~viN 244 (283)
T 2oo3_A 166 DPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKM-REISSKSVRIELHLNPLINEGMTGCGLWIIN 244 (283)
T ss_dssp CCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHH-HHHCSSEEEEEEECCCSSCCSCCEEEEEEES
T ss_pred CCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHH-HhcCCCeEEEEEEecCCCCCCcCceeEEEEC
Confidence 7777655678888888866 567899888887777777777777777 5555566555433332 222223346666
Q ss_pred CC
Q 046623 206 PP 207 (218)
Q Consensus 206 ~~ 207 (218)
+|
T Consensus 245 pP 246 (283)
T 2oo3_A 245 PP 246 (283)
T ss_dssp CC
T ss_pred Cc
Confidence 66
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.83 E-value=1.9e-09 Score=86.12 Aligned_cols=96 Identities=20% Similarity=0.194 Sum_probs=65.4
Q ss_pred CeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh-------C-CCCceEEEEeecCCCCccccccCCCC
Q 046623 55 KSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEAN-------G-LGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~-------~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
.+|||+|||+|..++.++..++ +|+++|+++ ++..++.+++.. + +..+++++.+|..+.... ..++|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~---~~~~f 165 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD---ITPRP 165 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT---CSSCC
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh---CcccC
Confidence 7999999999999999998877 899999999 877777766432 1 223588998876543211 12469
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
|+|++++++.... -.+.++...+.+++.+
T Consensus 166 DvV~lDP~y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 166 QVVYLDPMFPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp SEEEECCCCCCCC-C-----HHHHHHHHHS
T ss_pred CEEEEcCCCCCcc-cchHHHHHHHHHHHhh
Confidence 9999987775532 2345555556665543
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.83 E-value=1e-09 Score=87.75 Aligned_cols=82 Identities=18% Similarity=0.227 Sum_probs=61.0
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-h-------HHHHHHHHHHhCCCCceEEEEeecCCCCccccccC-
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-L-------LPGLINNVEANGLGGRVEVRELVWGSDDLSQLSEL- 122 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~-------~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 122 (218)
.++.+|||+|||+|..++.+++.+. +|+++|+++ . ++.+++|.+.+++.++++++.+|..+.... .+.
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~--~~~~ 158 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA--LVKT 158 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH--HHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh--hhcc
Confidence 3567999999999999999998765 899999998 3 455667777776656699999887543210 022
Q ss_pred -CCCcEEEEcccccC
Q 046623 123 -GEFDMVIMSDVFYD 136 (218)
Q Consensus 123 -~~~D~Iv~~~~~~~ 136 (218)
++||+|++++++.+
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 68999999887754
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.82 E-value=2e-08 Score=79.85 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=60.9
Q ss_pred HHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCC
Q 046623 45 FISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELG 123 (218)
Q Consensus 45 ~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 123 (218)
.+......++.+|||+|||+|.++..+++.+..+|+++|+++ +++.++++ . ..+++++.+|+........ .+
T Consensus 23 iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~~--~~ 95 (249)
T 3ftd_A 23 IAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCSL--GK 95 (249)
T ss_dssp HHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGGS--CS
T ss_pred HHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhHc--cC
Confidence 333333356789999999999999999887656999999999 99998877 1 2458999999887764321 12
Q ss_pred CCcEEEEccccc
Q 046623 124 EFDMVIMSDVFY 135 (218)
Q Consensus 124 ~~D~Iv~~~~~~ 135 (218)
...|++|.|++
T Consensus 96 -~~~vv~NlPy~ 106 (249)
T 3ftd_A 96 -ELKVVGNLPYN 106 (249)
T ss_dssp -SEEEEEECCTT
T ss_pred -CcEEEEECchh
Confidence 23666766653
No 277
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.82 E-value=9e-09 Score=82.02 Aligned_cols=164 Identities=16% Similarity=0.029 Sum_probs=95.6
Q ss_pred ccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEe
Q 046623 32 GAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVREL 109 (218)
Q Consensus 32 g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~ 109 (218)
|...-.+++.|.++..+....++.+|||||||+|.++..++.. +..++.++|+.. ........ ...+ .++.....
T Consensus 53 ~~YrSRaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~ 129 (277)
T 3evf_A 53 GVAVSRGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKD 129 (277)
T ss_dssp CBCSSTHHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEEC
T ss_pred CCccccHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEec
Confidence 3344578889999988844456779999999999999988754 566788888764 21110000 0001 12333343
Q ss_pred ecCCCCccccccCCCCcEEEEcccccCC----cc--hHHHHHHHHHHhcCC-CceEEEEEeeccCChHHHHHHHHHhCCc
Q 046623 110 VWGSDDLSQLSELGEFDMVIMSDVFYDP----EE--MVGLGKTLKRVCGTG-RHTVVWAVSEVRTRTGDCLHELIMSQGF 182 (218)
Q Consensus 110 d~~~~~~~~~~~~~~~D~Iv~~~~~~~~----~~--~~~~l~~~~~lL~~g-G~~~i~~~~~~~~~~~~~~~~~~~~~gf 182 (218)
++..... ..+++|+|+++-..... +. ...+++.+.++|+|| |.+++-+..++-....+++..+ +..|
T Consensus 130 ~~dv~~l----~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~l--k~~F 203 (277)
T 3evf_A 130 KTDIHRL----EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELL--QRRF 203 (277)
T ss_dssp SCCTTTS----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHH--HHHH
T ss_pred cceehhc----CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHH--HHhc
Confidence 3322222 45789999995443310 11 123568888999999 9444433321123345555555 4556
Q ss_pred EEEEE--EccCCCCCCCceeEEEec
Q 046623 183 RVIEL--TCQLGGGCPEAFAVYELI 205 (218)
Q Consensus 183 ~~~~~--~~~~~~~~~~~~~l~~~~ 205 (218)
.-..+ | ..+....+.+.+-..+
T Consensus 204 ~~V~~~KP-aSR~~S~E~Y~V~~~r 227 (277)
T 3evf_A 204 GGTVIRNP-LSRNSTHEMYYVSGAR 227 (277)
T ss_dssp CCEEECCT-TSCTTCCCEEEESSCC
T ss_pred CCEEEEeC-CCCCCCCceEEEEecC
Confidence 66555 6 6666666666664433
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.80 E-value=1.5e-08 Score=81.93 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=60.1
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCe----EEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCC--
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATR----VVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELG-- 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~----v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 123 (218)
..++.+|||+|||+|.++..+++.+. + |+++|+++ +++.++++. ..+++++.+|+.+..........
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~~ 113 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGSIARPGDE 113 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGGGSCSSSS
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhHhcccccC
Confidence 35678999999999999999987755 4 99999999 999999883 24599999998876653321111
Q ss_pred CCcEEEEccccc
Q 046623 124 EFDMVIMSDVFY 135 (218)
Q Consensus 124 ~~D~Iv~~~~~~ 135 (218)
..+.|++|.|++
T Consensus 114 ~~~~vv~NlPY~ 125 (279)
T 3uzu_A 114 PSLRIIGNLPYN 125 (279)
T ss_dssp CCEEEEEECCHH
T ss_pred CceEEEEccCcc
Confidence 345788877764
No 279
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.72 E-value=1.7e-08 Score=82.32 Aligned_cols=80 Identities=18% Similarity=0.208 Sum_probs=62.9
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc--cCCCCcE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS--ELGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~D~ 127 (218)
.++.+|||+|||+|..+..+++.. ..+|+++|+++ +++.++++++.++ .++.++.+|+.+... ... ...+||.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~-~l~~~g~~~~D~ 101 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADF-LLKTLGIEKVDG 101 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHH-HHHHTTCSCEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHH-HHHhcCCCCCCE
Confidence 467899999999999999998763 46999999999 9999999998877 569999988765321 000 1157999
Q ss_pred EEEcccc
Q 046623 128 VIMSDVF 134 (218)
Q Consensus 128 Iv~~~~~ 134 (218)
|+++.++
T Consensus 102 Vl~D~gv 108 (301)
T 1m6y_A 102 ILMDLGV 108 (301)
T ss_dssp EEEECSC
T ss_pred EEEcCcc
Confidence 9986654
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.66 E-value=1.8e-08 Score=80.47 Aligned_cols=162 Identities=13% Similarity=-0.042 Sum_probs=95.3
Q ss_pred ccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEe
Q 046623 32 GAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVREL 109 (218)
Q Consensus 32 g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~ 109 (218)
|...-.+++.|.++..+....++.+|||||||+|.++..++ +.++.++.++|+.. ....+... ...+ .++.....
T Consensus 69 g~YrSRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~ 145 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKD 145 (282)
T ss_dssp SBCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEEC
T ss_pred CCEecHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeC
Confidence 33444788999999887544567799999999999999987 55667899999875 32222110 0001 11222221
Q ss_pred ecCCCCccccccCCCCcEEEEcccccCCc-------chHHHHHHHHHHhcCC--CceEEEEEeeccCChHHHHHHHHHhC
Q 046623 110 VWGSDDLSQLSELGEFDMVIMSDVFYDPE-------EMVGLGKTLKRVCGTG--RHTVVWAVSEVRTRTGDCLHELIMSQ 180 (218)
Q Consensus 110 d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~-------~~~~~l~~~~~lL~~g--G~~~i~~~~~~~~~~~~~~~~~~~~~ 180 (218)
+. .... ....++|+|++.-... .. ....+++.+.++|+|| |.+++-+..++-....+++..+ +.
T Consensus 146 ~~---dv~~-l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~l--k~ 218 (282)
T 3gcz_A 146 KT---DVFN-MEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRL--QL 218 (282)
T ss_dssp SC---CGGG-SCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHH--HH
T ss_pred Cc---chhh-cCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHH--HH
Confidence 11 1111 1457899999854433 21 1224577778999999 9444444332123455555555 45
Q ss_pred CcEEEEE--EccCCCCCCCceeEEEe
Q 046623 181 GFRVIEL--TCQLGGGCPEAFAVYEL 204 (218)
Q Consensus 181 gf~~~~~--~~~~~~~~~~~~~l~~~ 204 (218)
.|.-..+ | ..+....+.+.+-..
T Consensus 219 ~F~~V~~~KP-aSR~~S~E~Y~V~~~ 243 (282)
T 3gcz_A 219 KHGGGLVRVP-LSRNSTHEMYWVSGT 243 (282)
T ss_dssp HHCCEEECCT-TSCTTCCCEEEETTC
T ss_pred hcCCEEEEcC-CCcccCcceeEEEec
Confidence 5665555 6 666566666655433
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.66 E-value=2e-08 Score=79.99 Aligned_cols=78 Identities=12% Similarity=0.119 Sum_probs=57.5
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCe--EEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccccc-CCCCcE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATR--VVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSE-LGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~--v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~D~ 127 (218)
.++.+|||+|||+|.++. +++ + .+ |+++|+++ +++.+++++... .+++++.+|+.......... .+..|.
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~~~~~~~ 93 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEKMGQPLR 93 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHHHTSCEE
T ss_pred CCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcccCCceE
Confidence 467799999999999999 654 3 36 99999999 999998876543 35899999987755422110 124578
Q ss_pred EEEccccc
Q 046623 128 VIMSDVFY 135 (218)
Q Consensus 128 Iv~~~~~~ 135 (218)
|++|.|++
T Consensus 94 vvsNlPY~ 101 (252)
T 1qyr_A 94 VFGNLPYN 101 (252)
T ss_dssp EEEECCTT
T ss_pred EEECCCCC
Confidence 88877764
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.64 E-value=1e-07 Score=79.48 Aligned_cols=134 Identities=17% Similarity=0.084 Sum_probs=90.9
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCC-----CceEEEEee
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLG-----GRVEVRELV 110 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~-----~~~~~~~~d 110 (218)
+++..+..+ . ..+|.+|||+.+|.|.=+..++..+. ..++++|+++ -+..+++|+...+.. .++.+...|
T Consensus 136 aS~l~~~~L-~--~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D 212 (359)
T 4fzv_A 136 ASLLPVLAL-G--LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWD 212 (359)
T ss_dssp GGHHHHHHH-C--CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCC
T ss_pred HHHHHHHHh-C--CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCc
Confidence 444444444 3 25788999999999998888876544 4799999999 999999999887653 346666555
Q ss_pred cCCCCccccccCCCCcEEEEcccccCC--------c----------------chHHHHHHHHHHhcCCCceEEEEEeecc
Q 046623 111 WGSDDLSQLSELGEFDMVIMSDVFYDP--------E----------------EMVGLGKTLKRVCGTGRHTVVWAVSEVR 166 (218)
Q Consensus 111 ~~~~~~~~~~~~~~~D~Iv~~~~~~~~--------~----------------~~~~~l~~~~~lL~~gG~~~i~~~~~~~ 166 (218)
...... ...+.||.|++..|+... . ...+++..+.++|||||.++..+++-..
T Consensus 213 ~~~~~~---~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 213 GRKWGE---LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp GGGHHH---HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred hhhcch---hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 432211 135689999998776431 0 1356888889999999954444554444
Q ss_pred CChHHHHHHHH
Q 046623 167 TRTGDCLHELI 177 (218)
Q Consensus 167 ~~~~~~~~~~~ 177 (218)
..-+..+..++
T Consensus 290 ~ENE~vV~~~L 300 (359)
T 4fzv_A 290 LQNEYVVQGAI 300 (359)
T ss_dssp TTTHHHHHHHH
T ss_pred hhCHHHHHHHH
Confidence 44455555544
No 283
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.63 E-value=2.1e-06 Score=75.23 Aligned_cols=127 Identities=15% Similarity=0.085 Sum_probs=84.7
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh----C----------CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL----G----------ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL 116 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~----~----------~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (218)
.++.+|+|..||+|.+.+.+.+. . ...++|+|+++ +...++-|+...+... ..+..+|......
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~-~~I~~~dtL~~~~ 294 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRIDPENSLRFPL 294 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC-CEEECSCTTCSCG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc-ccccccccccCch
Confidence 45679999999999998876432 1 13699999999 9999999998888753 4566666554432
Q ss_pred cccccCCCCcEEEEcccccCCc----------------chHHHHHHHHHHhc-------CCCceEEEEEeec--cCChHH
Q 046623 117 SQLSELGEFDMVIMSDVFYDPE----------------EMVGLGKTLKRVCG-------TGRHTVVWAVSEV--RTRTGD 171 (218)
Q Consensus 117 ~~~~~~~~~D~Iv~~~~~~~~~----------------~~~~~l~~~~~lL~-------~gG~~~i~~~~~~--~~~~~~ 171 (218)
.......+||+|++|||+.... ..-.++..+.+.|+ +||++.+++.... +.....
T Consensus 295 ~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~ 374 (530)
T 3ufb_A 295 REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISA 374 (530)
T ss_dssp GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHH
T ss_pred hhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHH
Confidence 2222446899999999985311 12346677777776 6887777766442 333444
Q ss_pred HHH-HHHHh
Q 046623 172 CLH-ELIMS 179 (218)
Q Consensus 172 ~~~-~~~~~ 179 (218)
.++ .+++.
T Consensus 375 ~iRk~Lle~ 383 (530)
T 3ufb_A 375 RIKEELLKN 383 (530)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhc
Confidence 344 44343
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.54 E-value=1.2e-06 Score=70.80 Aligned_cols=147 Identities=15% Similarity=0.013 Sum_probs=97.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhC-CCeEEEecCcc-hHHHHHHHHHHh-C---CCCceEEEEeecCCCCccccccCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLG-ATRVVLTDVKP-LLPGLINNVEAN-G---LGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~-~~~v~~~D~~~-~~~~a~~~~~~~-~---~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
...++||=||.|.|.....+.+.. ..+++.+|+++ .++.+++.+... + -.++++++..|....... ..++|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~---~~~~y 158 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ---TSQTF 158 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC---SSCCE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh---ccccC
Confidence 356799999999999999998764 46999999999 999998887542 1 136799999887765421 55789
Q ss_pred cEEEEcc--cccCCc--chHHHHHHHHHHhcCCCceEEEEEeeccC--ChHHHHHHHHHhCCcEEEEE---EccCCCCCC
Q 046623 126 DMVIMSD--VFYDPE--EMVGLGKTLKRVCGTGRHTVVWAVSEVRT--RTGDCLHELIMSQGFRVIEL---TCQLGGGCP 196 (218)
Q Consensus 126 D~Iv~~~--~~~~~~--~~~~~l~~~~~lL~~gG~~~i~~~~~~~~--~~~~~~~~~~~~~gf~~~~~---~~~~~~~~~ 196 (218)
|+|++.. +..... -..++++.+.+.|+|||.++......... ......+.+ ++ -|..... .++..++..
T Consensus 159 DvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l-~~-~F~~v~~~~~~vPty~~g~ 236 (294)
T 3o4f_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKL-SH-YFSDVGFYQAAIPTYYGGI 236 (294)
T ss_dssp EEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHH-HH-HCSEEEEEEECCTTSSSSC
T ss_pred CEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHH-Hh-hCCceeeeeeeeccCCCcc
Confidence 9999732 221111 23679999999999999555444433211 122333443 33 3554443 455555666
Q ss_pred CceeEEE
Q 046623 197 EAFAVYE 203 (218)
Q Consensus 197 ~~~~l~~ 203 (218)
..+.+..
T Consensus 237 w~f~~as 243 (294)
T 3o4f_A 237 MTFAWAT 243 (294)
T ss_dssp EEEEEEE
T ss_pred eeheeEE
Confidence 6666554
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.49 E-value=5.2e-07 Score=72.47 Aligned_cols=162 Identities=13% Similarity=-0.012 Sum_probs=93.8
Q ss_pred ccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEe
Q 046623 32 GAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVREL 109 (218)
Q Consensus 32 g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~ 109 (218)
|...-.+++.|.+...+....++.+||||||++|.++..+++ .+...|.++|+.. ........ ...+. +.+.+. .
T Consensus 60 g~yrSRaa~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~-~~~~~-~iv~~~-~ 136 (300)
T 3eld_A 60 GISVSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHM-QTLGW-NIVKFK-D 136 (300)
T ss_dssp CCCSSTTHHHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTG-GGEEEE-C
T ss_pred CCccchHHHHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccc-cccCC-ceEEee-c
Confidence 344457888888888773335788999999999999999985 4666889999864 31110000 00000 112222 1
Q ss_pred ecCCCCccccccCCCCcEEEEcccccCCcc-------hHHHHHHHHHHhcCC-CceEEEEEeeccCChHHHHHHHHHhCC
Q 046623 110 VWGSDDLSQLSELGEFDMVIMSDVFYDPEE-------MVGLGKTLKRVCGTG-RHTVVWAVSEVRTRTGDCLHELIMSQG 181 (218)
Q Consensus 110 d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~-------~~~~l~~~~~lL~~g-G~~~i~~~~~~~~~~~~~~~~~~~~~g 181 (218)
+..-... ...++|+|+++-... ... ...+++.+.++|+|| |.+++-+....-....+++..+ +..
T Consensus 137 ~~di~~l----~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~l--k~~ 209 (300)
T 3eld_A 137 KSNVFTM----PTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERL--QLR 209 (300)
T ss_dssp SCCTTTS----CCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHH--HHH
T ss_pred Cceeeec----CCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHH--HHh
Confidence 1111111 346899999854333 221 234677788999999 9544443321123344555555 445
Q ss_pred cEEEEE--EccCCCCCCCceeEEEe
Q 046623 182 FRVIEL--TCQLGGGCPEAFAVYEL 204 (218)
Q Consensus 182 f~~~~~--~~~~~~~~~~~~~l~~~ 204 (218)
|.-..+ | ..+....+.|.+...
T Consensus 210 F~~V~~~KP-aSR~~S~E~Y~V~~~ 233 (300)
T 3eld_A 210 FGGGIVRVP-FSRNSTHEMYYISGA 233 (300)
T ss_dssp HCCEEECCT-TSCTTCCCEEEESSC
T ss_pred CCcEEEEeC-CCCCCChHHeeeccC
Confidence 665555 6 666666666666433
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.48 E-value=5e-07 Score=72.06 Aligned_cols=130 Identities=15% Similarity=0.014 Sum_probs=78.2
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-------CC------CeEEEecCcc-hHH--------------HHHHHHHHhC-----
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-------GA------TRVVLTDVKP-LLP--------------GLINNVEANG----- 99 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-------~~------~~v~~~D~~~-~~~--------------~a~~~~~~~~----- 99 (218)
+..+|||+|+|+|...+.+++. .+ .+++++|..+ ..+ .++++++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4468999999999887775432 22 3899999876 322 3444443310
Q ss_pred -----CC---CceEEEEeecCCCCcccc-ccCCCCcEEEEcccccC--Ccc--hHHHHHHHHHHhcCCCceEEEEEeecc
Q 046623 100 -----LG---GRVEVRELVWGSDDLSQL-SELGEFDMVIMSDVFYD--PEE--MVGLGKTLKRVCGTGRHTVVWAVSEVR 166 (218)
Q Consensus 100 -----~~---~~~~~~~~d~~~~~~~~~-~~~~~~D~Iv~~~~~~~--~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~~ 166 (218)
.. .++++..+|..+...... .....||.|+. |++.. .++ ..++++.+.++|+|||.++.+++
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~ifl-D~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa---- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFL-DGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS---- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEE-CSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEE-CCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC----
Confidence 11 235677777654322100 01137999999 44432 112 47899999999999993332221
Q ss_pred CChHHHHHHHHHhCCcEEEEEEcc
Q 046623 167 TRTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 167 ~~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
. ..+...+...||.+.+.|-.
T Consensus 215 --a-~~vrr~L~~aGF~v~~~~g~ 235 (257)
T 2qy6_A 215 --A-GFVRRGLQEAGFTMQKRKGF 235 (257)
T ss_dssp --B-HHHHHHHHHHTEEEEEECCS
T ss_pred --C-HHHHHHHHHCCCEEEeCCCC
Confidence 2 23444447889999887543
No 287
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.45 E-value=1.6e-06 Score=69.48 Aligned_cols=150 Identities=13% Similarity=-0.015 Sum_probs=90.7
Q ss_pred cccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEE
Q 046623 31 TGAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRE 108 (218)
Q Consensus 31 ~g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~ 108 (218)
.|...-.+++.|.+........++.+||||||++|.++..++ ..++.+|.++|+.. -.+.-.-. ...+. +.+.+..
T Consensus 72 ~g~y~SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~-~ql~w-~lV~~~~ 149 (321)
T 3lkz_A 72 GGHPVSRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLV-QSYGW-NIVTMKS 149 (321)
T ss_dssp SCCCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCC-CBTTG-GGEEEEC
T ss_pred CCCccchHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchh-hhcCC-cceEEEe
Confidence 355566788999988887444677799999999999999775 56777899999876 33210000 00111 2266665
Q ss_pred e-ecCCCCccccccCCCCcEEEEcccccCCcc-------hHHHHHHHHHHhcCC-CceEEEEEeeccCChHHHHHHHHHh
Q 046623 109 L-VWGSDDLSQLSELGEFDMVIMSDVFYDPEE-------MVGLGKTLKRVCGTG-RHTVVWAVSEVRTRTGDCLHELIMS 179 (218)
Q Consensus 109 ~-d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~-------~~~~l~~~~~lL~~g-G~~~i~~~~~~~~~~~~~~~~~~~~ 179 (218)
. |+... +..++|+|+| |+-...+. .-..++.+.++|++| |.+.+-+..++.+.+.+.++.+-..
T Consensus 150 ~~Dv~~l------~~~~~D~ivc-DigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~ 222 (321)
T 3lkz_A 150 GVDVFYR------PSECCDTLLC-DIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRR 222 (321)
T ss_dssp SCCTTSS------CCCCCSEEEE-CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHH
T ss_pred ccCHhhC------CCCCCCEEEE-ECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHH
Confidence 4 54333 2366999998 33333222 122566678899988 6444433333334455666666344
Q ss_pred CCcEEEEEEc
Q 046623 180 QGFRVIELTC 189 (218)
Q Consensus 180 ~gf~~~~~~~ 189 (218)
.|=..+..|.
T Consensus 223 fgg~lvr~P~ 232 (321)
T 3lkz_A 223 YGGGLVRNPL 232 (321)
T ss_dssp HCCEEECCTT
T ss_pred hCCEeEeCCC
Confidence 5555555566
No 288
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.40 E-value=3.2e-07 Score=72.19 Aligned_cols=140 Identities=15% Similarity=0.067 Sum_probs=82.2
Q ss_pred ccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHh-CC----CeEEEec--Ccc-hHHHHHHHHHHhCCCCc
Q 046623 32 GAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARL-GA----TRVVLTD--VKP-LLPGLINNVEANGLGGR 103 (218)
Q Consensus 32 g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~-~~----~~v~~~D--~~~-~~~~a~~~~~~~~~~~~ 103 (218)
|...-.+++.|.+.-.+....++.+||||||+.|.++..+++. +. ..++++| +.| .... .++ +-
T Consensus 52 g~yRSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~-------~Gv-~~ 123 (269)
T 2px2_A 52 GHPVSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQS-------YGW-NI 123 (269)
T ss_dssp SCCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCS-------TTG-GG
T ss_pred CCcccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccC-------CCc-eE
Confidence 4445578888888877753357889999999999999999764 12 2456666 333 1100 111 11
Q ss_pred eEEEEe-ecCCCCccccccCCCCcEEEEcccccCC-c--c---hHHHHHHHHHHhcCCC-ceEEEEEeeccCChHHHHHH
Q 046623 104 VEVREL-VWGSDDLSQLSELGEFDMVIMSDVFYDP-E--E---MVGLGKTLKRVCGTGR-HTVVWAVSEVRTRTGDCLHE 175 (218)
Q Consensus 104 ~~~~~~-d~~~~~~~~~~~~~~~D~Iv~~~~~~~~-~--~---~~~~l~~~~~lL~~gG-~~~i~~~~~~~~~~~~~~~~ 175 (218)
+.+..+ |+.+. ...++|+|++.-..... . + ....++.+.++|+||| .+++-+.........++++.
T Consensus 124 i~~~~G~Df~~~------~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~ 197 (269)
T 2px2_A 124 VTMKSGVDVFYK------PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLES 197 (269)
T ss_dssp EEEECSCCGGGS------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHH
T ss_pred EEeeccCCccCC------CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHH
Confidence 344445 76542 33579999984332211 0 1 1125677788999999 66655544323334444555
Q ss_pred HHHhCCcEEEEE
Q 046623 176 LIMSQGFRVIEL 187 (218)
Q Consensus 176 ~~~~~gf~~~~~ 187 (218)
+ +..|.-..+
T Consensus 198 l--k~~F~~vkv 207 (269)
T 2px2_A 198 L--QRRFGGGLV 207 (269)
T ss_dssp H--HHHHCCEEE
T ss_pred H--HHHcCCEEE
Confidence 5 445555555
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.38 E-value=1.3e-06 Score=63.09 Aligned_cols=94 Identities=20% Similarity=0.171 Sum_probs=63.2
Q ss_pred ccccchhHHHHHHHHhcCCCCCCCeEEEECCCCC-HHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEE
Q 046623 32 GAWLWDSALILAQFISTHFDFQNKSVLELGAGAG-LPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRE 108 (218)
Q Consensus 32 g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G-~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~ 108 (218)
+.+.|+ .|++|+.+.. .++.+|||+|||+| ..+..+++ .|. .|+++|+++ +++ ++.
T Consensus 18 ~~~m~e---~LaeYI~~~~-~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~ 76 (153)
T 2k4m_A 18 GSHMWN---DLAVYIIRCS-GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVR 76 (153)
T ss_dssp CCHHHH---HHHHHHHHHS-CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EEC
T ss_pred hhhHHH---HHHHHHHhcC-CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEE
Confidence 445544 4777876622 24569999999999 59999987 665 899999999 776 666
Q ss_pred eecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhc
Q 046623 109 LVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCG 152 (218)
Q Consensus 109 ~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~ 152 (218)
.|+.+...+ .-+.||+|.+..|. .++...+..+++...
T Consensus 77 dDiF~P~~~---~Y~~~DLIYsirPP---~El~~~i~~lA~~v~ 114 (153)
T 2k4m_A 77 DDITSPRME---IYRGAALIYSIRPP---AEIHSSLMRVADAVG 114 (153)
T ss_dssp CCSSSCCHH---HHTTEEEEEEESCC---TTTHHHHHHHHHHHT
T ss_pred ccCCCCccc---ccCCcCEEEEcCCC---HHHHHHHHHHHHHcC
Confidence 676654431 11489999654442 445555555555543
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.34 E-value=1.5e-06 Score=70.10 Aligned_cols=127 Identities=13% Similarity=0.022 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCCCHHHHHHHHh------CCCeEEEecCcc---------------------------hHHHHHHHHHHh
Q 046623 52 FQNKSVLELGAGAGLPGLTAARL------GATRVVLTDVKP---------------------------LLPGLINNVEAN 98 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~------~~~~v~~~D~~~---------------------------~~~~a~~~~~~~ 98 (218)
...+.|||+|+..|..++.++.. ...+++++|..+ ..+.+++|++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34669999999999988887532 245899999532 356689999999
Q ss_pred CCC-CceEEEEeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc-CChHHHHHHH
Q 046623 99 GLG-GRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR-TRTGDCLHEL 176 (218)
Q Consensus 99 ~~~-~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~-~~~~~~~~~~ 176 (218)
++. ++++++.+|..+.... . +.++||+|.+..-.| ......++.+.++|+||| +|++..... +...+.+.++
T Consensus 185 gl~~~~I~li~Gda~etL~~-~-~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGG--iIv~DD~~~~~G~~~Av~Ef 258 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPT-A-PIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGG--YVIVDDYMMCPPCKDAVDEY 258 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTT-C-CCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEE--EEEESSCTTCHHHHHHHHHH
T ss_pred CCCcCceEEEEeCHHHHHhh-C-CCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCE--EEEEcCCCCCHHHHHHHHHH
Confidence 884 7899999987544321 1 346899999954322 234577888999999999 444433211 2234445555
Q ss_pred HHhCCcEE
Q 046623 177 IMSQGFRV 184 (218)
Q Consensus 177 ~~~~gf~~ 184 (218)
.++.++..
T Consensus 259 ~~~~~i~~ 266 (282)
T 2wk1_A 259 RAKFDIAD 266 (282)
T ss_dssp HHHTTCCS
T ss_pred HHhcCCce
Confidence 46666543
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.32 E-value=9.8e-07 Score=68.54 Aligned_cols=149 Identities=13% Similarity=0.006 Sum_probs=91.0
Q ss_pred ccccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEe
Q 046623 32 GAWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVREL 109 (218)
Q Consensus 32 g~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~ 109 (218)
|...-.+++.|.+...+....++.+||||||++|.++..++ ..++.+|.++|+.. -.+.-.- ....|. +.++|..+
T Consensus 57 g~yrSRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~-~~s~gw-n~v~fk~g 134 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP-MSTYGW-NIVKLMSG 134 (267)
T ss_dssp SCCSSTHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC-CCCTTT-TSEEEECS
T ss_pred CCccchHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch-hhhcCc-CceEEEec
Confidence 33445678888888877544677799999999999999776 55677899999876 4321000 012222 34888876
Q ss_pred -ecCCCCccccccCCCCcEEEEcccccCCc---c---hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCc
Q 046623 110 -VWGSDDLSQLSELGEFDMVIMSDVFYDPE---E---MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGF 182 (218)
Q Consensus 110 -d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~---~---~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf 182 (218)
|+... +..++|.|+|.---.+.. + .-..++.+.++|++ |.+.+-+..+..+.+.+.++.+-...|=
T Consensus 135 vDv~~~------~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 135 KDVFYL------PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKHGG 207 (267)
T ss_dssp CCGGGC------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHHCC
T ss_pred cceeec------CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHhCC
Confidence 65333 336799999843222211 1 12255666788888 6444434333333355666666344555
Q ss_pred EEEEEEc
Q 046623 183 RVIELTC 189 (218)
Q Consensus 183 ~~~~~~~ 189 (218)
..+..|.
T Consensus 208 ~lVR~P~ 214 (267)
T 3p8z_A 208 MLVRNPL 214 (267)
T ss_dssp EEECCTT
T ss_pred EeEeCCC
Confidence 5555566
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.30 E-value=3e-06 Score=70.52 Aligned_cols=103 Identities=16% Similarity=0.056 Sum_probs=72.4
Q ss_pred chhHHHHHHHHhcC--------CCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEE
Q 046623 36 WDSALILAQFISTH--------FDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVR 107 (218)
Q Consensus 36 w~~~~~l~~~l~~~--------~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~ 107 (218)
-.+...|.+.+... ...+|.++|||||.+|.++..+++.+. +|+++|..++...+... .+++++
T Consensus 186 SRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l~~~-------~~V~~~ 257 (375)
T 4auk_A 186 SRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSLMDT-------GQVTWL 257 (375)
T ss_dssp CTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHHHTT-------TCEEEE
T ss_pred CHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhhccC-------CCeEEE
Confidence 45666676654331 124788999999999999999998876 99999988733332211 458999
Q ss_pred EeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCC
Q 046623 108 ELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG 154 (218)
Q Consensus 108 ~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g 154 (218)
..|...... ...++|+|++.-. ..+......+.+++..+
T Consensus 258 ~~d~~~~~~----~~~~~D~vvsDm~----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 258 REDGFKFRP----TRSNISWMVCDMV----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp CSCTTTCCC----CSSCEEEEEECCS----SCHHHHHHHHHHHHHTT
T ss_pred eCccccccC----CCCCcCEEEEcCC----CChHHhHHHHHHHHhcc
Confidence 888776654 4568999999433 34566666677777665
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.13 E-value=4.5e-06 Score=69.70 Aligned_cols=116 Identities=20% Similarity=0.125 Sum_probs=76.6
Q ss_pred HHHHHHHhcCC--CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC---C----CCceEEEEe
Q 046623 40 LILAQFISTHF--DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG---L----GGRVEVREL 109 (218)
Q Consensus 40 ~~l~~~l~~~~--~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~---~----~~~~~~~~~ 109 (218)
....+.+...+ ..++++||=||.|.|.....+.+.+..+++.+|+++ .++.+++.+.... . .++++++..
T Consensus 190 ~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~ 269 (381)
T 3c6k_A 190 LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 269 (381)
T ss_dssp HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehH
Confidence 33444444422 245689999999999999999888778999999999 8888888753211 1 134677776
Q ss_pred ecCCCCccccccCCCCcEEEEccccc---CC-----c---chHHHHHHHHHHhcCCCc
Q 046623 110 VWGSDDLSQLSELGEFDMVIMSDVFY---DP-----E---EMVGLGKTLKRVCGTGRH 156 (218)
Q Consensus 110 d~~~~~~~~~~~~~~~D~Iv~~~~~~---~~-----~---~~~~~l~~~~~lL~~gG~ 156 (218)
|............++||+|+.. .+. .. . -..++++.+.+.|+|||.
T Consensus 270 Da~~fl~~~~~~~~~yDvIIvD-l~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GV 326 (381)
T 3c6k_A 270 DCIPVLKRYAKEGREFDYVIND-LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGK 326 (381)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEE-CCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHhhhhccCceeEEEEC-CCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCE
Confidence 6543221101134689999984 221 10 0 135678889999999993
No 294
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.03 E-value=2.1e-05 Score=65.87 Aligned_cols=108 Identities=13% Similarity=0.060 Sum_probs=68.9
Q ss_pred CCeEEEECCCCCHHHHHHH---------Hh-------CCCeEEEecCcc-hHHHHHHHHHHhC-----------CCCceE
Q 046623 54 NKSVLELGAGAGLPGLTAA---------RL-------GATRVVLTDVKP-LLPGLINNVEANG-----------LGGRVE 105 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~---------~~-------~~~~v~~~D~~~-~~~~a~~~~~~~~-----------~~~~~~ 105 (218)
..+|+|+||++|..++.+. +. +..+|+..|... ....+-+.+.... ......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999998877761 11 224788999887 6655544443211 001123
Q ss_pred EEEeecCCCCccccccCCCCcEEEEcccccCCc--------------------------------------chHHHHHHH
Q 046623 106 VRELVWGSDDLSQLSELGEFDMVIMSDVFYDPE--------------------------------------EMVGLGKTL 147 (218)
Q Consensus 106 ~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~--------------------------------------~~~~~l~~~ 147 (218)
+..+.....- ....+.+++|+|+++.++|+.. +...+++..
T Consensus 133 f~~gvpgSFy-~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFY-RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTT-SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhh-cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333222 1223789999999999998854 344568888
Q ss_pred HHHhcCCCceEEEEE
Q 046623 148 KRVCGTGRHTVVWAV 162 (218)
Q Consensus 148 ~~lL~~gG~~~i~~~ 162 (218)
.+.|+|||++++...
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999995555444
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.00 E-value=1.2e-05 Score=65.23 Aligned_cols=47 Identities=26% Similarity=0.275 Sum_probs=42.4
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG 99 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~ 99 (218)
.++..|||++||+|.+++.+++.|. +++++|+++ +++.++++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHhc
Confidence 5788999999999999999998876 999999999 9999999987653
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.95 E-value=0.0001 Score=61.04 Aligned_cols=141 Identities=14% Similarity=0.035 Sum_probs=81.6
Q ss_pred CCeEEEECCCCCHHHHHHHHhC--CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 54 NKSVLELGAGAGLPGLTAARLG--ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~~--~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
..+++|+.||.|.+++.+...| ...+.++|+++ +++..+.|+.. ..++.+|+.+...... +...+|+++.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~-~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEF-DRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHH-HHHCCSEEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHc-CcCCcCEEEE
Confidence 3489999999999999998888 44799999999 99998888632 3456667665432111 1126999999
Q ss_pred cccccCC---------cc-hHHHHHHHHHHhcCCC---ceEEEEEeec--cC-ChHHHHHHHHHhCCcEEEEEE----cc
Q 046623 131 SDVFYDP---------EE-MVGLGKTLKRVCGTGR---HTVVWAVSEV--RT-RTGDCLHELIMSQGFRVIELT----CQ 190 (218)
Q Consensus 131 ~~~~~~~---------~~-~~~~l~~~~~lL~~gG---~~~i~~~~~~--~~-~~~~~~~~~~~~~gf~~~~~~----~~ 190 (218)
++|+... ++ ...++..+.++++.-. ..+++-.... .. .....++.+ .+.|+.+...- -.
T Consensus 75 gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l-~~~GY~v~~~vl~a~~~ 153 (343)
T 1g55_A 75 SPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTI-ENCGFQYQEFLLSPTSL 153 (343)
T ss_dssp CCC------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHH-HHTTEEEEEEEECGGGG
T ss_pred cCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHH-HHCCCeeEEEEEEHHHC
Confidence 9986421 11 2234444444443211 2344422221 11 233444444 88998876532 22
Q ss_pred CCCCCCCceeEE
Q 046623 191 LGGGCPEAFAVY 202 (218)
Q Consensus 191 ~~~~~~~~~~l~ 202 (218)
--+..+.+..+.
T Consensus 154 GvPQ~R~R~~iv 165 (343)
T 1g55_A 154 GIPNSRLRYFLI 165 (343)
T ss_dssp TCSCCCCEEEEE
T ss_pred CCCCcccEEEEE
Confidence 234555555554
No 297
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.92 E-value=0.00011 Score=61.56 Aligned_cols=76 Identities=17% Similarity=0.048 Sum_probs=58.8
Q ss_pred CeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc----cCCCCcEEE
Q 046623 55 KSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS----ELGEFDMVI 129 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~D~Iv 129 (218)
.+++|+.||.|.+++.+...|...+.++|+++ +++..+.|+ ....++.+|+.+....... ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 48999999999999999988886788999999 988888775 2356777777665432220 236799999
Q ss_pred EcccccC
Q 046623 130 MSDVFYD 136 (218)
Q Consensus 130 ~~~~~~~ 136 (218)
.++|+..
T Consensus 77 ggpPCQ~ 83 (376)
T 3g7u_A 77 GGPPCQG 83 (376)
T ss_dssp ECCCCCT
T ss_pred ecCCCCC
Confidence 9999743
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.91 E-value=7.8e-05 Score=62.57 Aligned_cols=83 Identities=16% Similarity=0.069 Sum_probs=50.3
Q ss_pred CCeEEEECCCCCHHHHHHHHh------------------CCCeEEEecCcc-hHHHHHHHH--------HHhCCCCceEE
Q 046623 54 NKSVLELGAGAGLPGLTAARL------------------GATRVVLTDVKP-LLPGLINNV--------EANGLGGRVEV 106 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~------------------~~~~v~~~D~~~-~~~~a~~~~--------~~~~~~~~~~~ 106 (218)
..+|+|+||++|..++.+... +..+|+..|... -...+-+.+ +..+-.....|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999888876322 113688888774 221111111 12221112456
Q ss_pred EEeecCCCCccccccCCCCcEEEEcccccCC
Q 046623 107 RELVWGSDDLSQLSELGEFDMVIMSDVFYDP 137 (218)
Q Consensus 107 ~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~ 137 (218)
+.+..+.. .....+.+++|+|+++.++|+.
T Consensus 133 ~~gvpgSF-y~rlfp~~S~d~v~Ss~aLHWl 162 (384)
T 2efj_A 133 IGAMPGSF-YSRLFPEESMHFLHSCYCLHWL 162 (384)
T ss_dssp EEECCSCT-TSCCSCTTCEEEEEEESCTTBC
T ss_pred EEecchhh-hhccCCCCceEEEEecceeeec
Confidence 65544333 2233488999999999999875
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.83 E-value=2.1e-05 Score=62.63 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=45.6
Q ss_pred HHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC
Q 046623 41 ILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG 99 (218)
Q Consensus 41 ~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~ 99 (218)
.|.+.+......++..|||.+||+|..++.+.+.|. +++++|+++ +++.++++++.++
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcc
Confidence 344443332235788999999999999999998875 999999999 9999999987765
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.75 E-value=0.00062 Score=54.64 Aligned_cols=137 Identities=18% Similarity=0.115 Sum_probs=82.3
Q ss_pred HHHHHHHhc--CCCCCCCeEEEECC------CCCHHHHHHHHhCC--CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEE
Q 046623 40 LILAQFIST--HFDFQNKSVLELGA------GAGLPGLTAARLGA--TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRE 108 (218)
Q Consensus 40 ~~l~~~l~~--~~~~~~~~vLDlG~------G~G~~~~~l~~~~~--~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~ 108 (218)
..|.+|+-. ..-..+.+|||+|+ .+|. ..+.+.+. ..++++|+++ ... . -.++.
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sd------------a-~~~Iq 158 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSD------------A-DSTLI 158 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCS------------S-SEEEE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccC------------C-CeEEE
Confidence 356677744 22245789999997 3444 33444444 3899999988 420 1 24477
Q ss_pred eecCCCCccccccCCCCcEEEEcccc---cC--------CcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHH
Q 046623 109 LVWGSDDLSQLSELGEFDMVIMSDVF---YD--------PEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELI 177 (218)
Q Consensus 109 ~d~~~~~~~~~~~~~~~D~Iv~~~~~---~~--------~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~ 177 (218)
+|+... ....+||+|++.-.. .+ ....+..++.+.+.|+|||.+++-+... .. .+.+..+
T Consensus 159 GD~~~~-----~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG--sg-~~~L~~l- 229 (344)
T 3r24_A 159 GDCATV-----HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH--SW-NADLYKL- 229 (344)
T ss_dssp SCGGGE-----EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS--SC-CHHHHHH-
T ss_pred cccccc-----ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC--CC-HHHHHHH-
Confidence 775432 245789999973221 11 1235667777889999999555555433 22 3556666
Q ss_pred HhCCcEEEEE-EccCCCCCCCceeE
Q 046623 178 MSQGFRVIEL-TCQLGGGCPEAFAV 201 (218)
Q Consensus 178 ~~~gf~~~~~-~~~~~~~~~~~~~l 201 (218)
. ..|...++ +-..+....+.+.+
T Consensus 230 r-k~F~~VK~fK~ASRa~SsEvYLV 253 (344)
T 3r24_A 230 M-GHFSWWTAFVTNVNASSSEAFLI 253 (344)
T ss_dssp H-TTEEEEEEEEEGGGTTSSCEEEE
T ss_pred H-hhCCeEEEECCCCCCCCeeEEEE
Confidence 4 48887776 43344455555555
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.72 E-value=0.00045 Score=56.81 Aligned_cols=72 Identities=15% Similarity=0.003 Sum_probs=55.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
++.+++|+.||.|.+++.+...|...+.++|+++ +++..+.|+... . ..|+.+.... ....+|+|+.+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~---~~~~~D~l~~g 78 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEK---TIPDHDILCAG 78 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGG---GSCCCSEEEEE
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHh---hCCCCCEEEEC
Confidence 4579999999999999999988887899999999 999988887331 1 3555544322 22469999999
Q ss_pred cccc
Q 046623 132 DVFY 135 (218)
Q Consensus 132 ~~~~ 135 (218)
+|+.
T Consensus 79 pPCQ 82 (327)
T 2c7p_A 79 FPCQ 82 (327)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 9885
No 302
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.72 E-value=3.4e-05 Score=61.80 Aligned_cols=75 Identities=11% Similarity=0.009 Sum_probs=56.6
Q ss_pred CCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-cccCCCCcEEE
Q 046623 52 FQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-LSELGEFDMVI 129 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~D~Iv 129 (218)
.++..+||.+||.|..+..+++.+ .+|+++|.++ +++.+++ ++. +++.++..++.+..... ....+++|.|+
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~~~vDgIL 94 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALGVERVDGIL 94 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcCCCCcCEEE
Confidence 467899999999999999998774 4999999999 9999887 533 46899988876543110 01225799999
Q ss_pred Ecc
Q 046623 130 MSD 132 (218)
Q Consensus 130 ~~~ 132 (218)
++.
T Consensus 95 ~DL 97 (285)
T 1wg8_A 95 ADL 97 (285)
T ss_dssp EEC
T ss_pred eCC
Confidence 743
No 303
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.63 E-value=5.2e-05 Score=63.11 Aligned_cols=108 Identities=15% Similarity=0.082 Sum_probs=70.5
Q ss_pred CCeEEEECCCCCHHHHHHHHh------------C-----CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 54 NKSVLELGAGAGLPGLTAARL------------G-----ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~------------~-----~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
.-+|+|+||++|..++.+... + ..+|+..|... ....+.+.+....-.....++.+..+..-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 457999999999766654211 1 14789999988 77777666543211012355555444332
Q ss_pred ccccccCCCCcEEEEcccccCCcc---------------------------------hHHHHHHHHHHhcCCCceEEEEE
Q 046623 116 LSQLSELGEFDMVIMSDVFYDPEE---------------------------------MVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 116 ~~~~~~~~~~D~Iv~~~~~~~~~~---------------------------------~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
....+.+++|+|+++..+|+..+ ...+++..++-|+|||++++...
T Consensus 132 -~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 -GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp -SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred -hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 23348899999999999887422 23458888999999995555443
No 304
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.58 E-value=0.0014 Score=53.64 Aligned_cols=119 Identities=12% Similarity=0.015 Sum_probs=78.8
Q ss_pred eEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccc
Q 046623 56 SVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVF 134 (218)
Q Consensus 56 ~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~ 134 (218)
+||||.||.|.+++.+.+.|..-+.++|+++ +.+.-+.|. + ..++.+|+.+.... ....+|+++.++|+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~------~-~~~~~~DI~~i~~~---~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH------S-AKLIKGDISKISSD---EFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC------C-SEEEESCGGGCCGG---GSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC------C-CCcccCChhhCCHh---hCCcccEEEecCCC
Confidence 7999999999999999888886788999999 998887774 1 35667777665432 23579999999988
Q ss_pred cCC----------cchHHHHHHH---HHHhcCCCceEEEEEeec------cCChHHHHHHHHHhCCcEEEEE
Q 046623 135 YDP----------EEMVGLGKTL---KRVCGTGRHTVVWAVSEV------RTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 135 ~~~----------~~~~~~l~~~---~~lL~~gG~~~i~~~~~~------~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
... +....++... .+.++|. .+++=.... .......+..+ .+.|+.+...
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~~~~~~~~~i~~~l-~~~GY~v~~~ 140 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQRHNKAVQEFIQEF-DNAGYDVHII 140 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGCTTSHHHHHHHHHH-HHHTEEEEEE
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecccccccccchhhhhhhhh-ccCCcEEEEE
Confidence 531 1222344433 3346773 344433221 12244555555 7888877554
No 305
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.54 E-value=0.0041 Score=51.03 Aligned_cols=140 Identities=13% Similarity=0.037 Sum_probs=85.2
Q ss_pred CCeEEEECCCCCHHHHHHHHhCC--CeE-EEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 54 NKSVLELGAGAGLPGLTAARLGA--TRV-VLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~~~--~~v-~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
..+++|+.||.|.+++.+.+.|. ..+ .++|+++ +.+..+.|+.. . +...|+.+...... +...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~------~-~~~~DI~~~~~~~i-~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE------E-VQVKNLDSISIKQI-ESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC------C-CBCCCTTTCCHHHH-HHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC------C-cccCChhhcCHHHh-ccCCCCEEE
Confidence 45899999999999999988874 456 7999999 99888888632 1 44566665543222 223799999
Q ss_pred EcccccCC------------cchHHHHHHHHH-HhcCC---CceEEEEEeecc---CChHHHHHHHHHhCCcEEEEEEcc
Q 046623 130 MSDVFYDP------------EEMVGLGKTLKR-VCGTG---RHTVVWAVSEVR---TRTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 130 ~~~~~~~~------------~~~~~~l~~~~~-lL~~g---G~~~i~~~~~~~---~~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
.++|+... +....++..+.+ +++.- -..+++-....- ......++.+ ++.|+.+...-+.
T Consensus 82 ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l-~~~GY~v~~~vl~ 160 (327)
T 3qv2_A 82 MSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNIL-IKNQYYIKDIICS 160 (327)
T ss_dssp ECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHH-HHTTCEEEEEEEC
T ss_pred ecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHH-HhCCCEEEEEEEe
Confidence 99887433 223356666666 55421 133444222211 1233344444 8889887655222
Q ss_pred ----CCCCCCCceeEE
Q 046623 191 ----LGGGCPEAFAVY 202 (218)
Q Consensus 191 ----~~~~~~~~~~l~ 202 (218)
--|..+.+..++
T Consensus 161 a~~yGvPQ~R~R~fiv 176 (327)
T 3qv2_A 161 PIDIGIPNSRTRYYVM 176 (327)
T ss_dssp GGGGTCSBCCCEEEEE
T ss_pred HHHcCCCccceEEEEE
Confidence 233455555553
No 306
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.53 E-value=0.00087 Score=54.39 Aligned_cols=171 Identities=12% Similarity=0.031 Sum_probs=89.2
Q ss_pred eEEEEcCeEEEEEeccCcCCCCccccc-----cccc-cchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHH----H
Q 046623 4 REIEIAGNSIIIQELDNVCDSVTGRPL-----TGAW-LWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAA----R 73 (218)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~-~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~----~ 73 (218)
+.+...|++.|+.+.. |+...-... .+.+ +-.......++-. .+.-+|||+|-|+|.-.+... +
T Consensus 47 eIi~T~DGS~Tl~s~~--f~e~YhS~~~GAl~Es~hVFi~~~~L~~r~~~----~~~~~IlE~GFGTGLNfl~t~~~~~~ 120 (308)
T 3vyw_A 47 EIADTADGSKTLIHKT--YGEPYHSQTAGAIRESLYKFVRPSRILEKAKE----RKVIRILDVGFGLGYNLAVALKHLWE 120 (308)
T ss_dssp EEEECTTSCEEEEETT--TTEESSCTTTCHHHHHHHHTHHHHTHHHHHHH----CSEEEEEEECCTTSHHHHHHHHHHHH
T ss_pred eeEECCCCCcCcccCc--cCCccCCCCCcHHHHHHHHHhccCCchHHhcC----CCCcEEEEeCCCccHHHHHHHHHHHH
Confidence 3567899999998853 332211100 1111 1111212222211 233589999999997554331 2
Q ss_pred hCC-C--eEEEecCcc-h--------HHHHHHHHHHh-----CCCCceEEEEeecCCCCccccccCCCCcEEEEcccccC
Q 046623 74 LGA-T--RVVLTDVKP-L--------LPGLINNVEAN-----GLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYD 136 (218)
Q Consensus 74 ~~~-~--~v~~~D~~~-~--------~~~a~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~ 136 (218)
... . +++.+|..+ . ...+.+.+... +-.-.+++..+|...... +. ....+|+++. |.|..
T Consensus 121 ~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~l~-~l-~~~~~Da~fl-DgFsP 197 (308)
T 3vyw_A 121 VNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARKRIK-EV-ENFKADAVFH-DAFSP 197 (308)
T ss_dssp HCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHHHGG-GC-CSCCEEEEEE-CCSCT
T ss_pred hCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHHHHh-hh-cccceeEEEe-CCCCc
Confidence 222 2 566777532 1 12222222111 111123455555543321 11 2347999998 55543
Q ss_pred Ccc----hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEcc
Q 046623 137 PEE----MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 137 ~~~----~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
... -.++++.++++++||| .+.++ .....++..+...||.+.++|-.
T Consensus 198 ~kNPeLWs~e~f~~l~~~~~pgg--~laTY-----taag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 198 YKNPELWTLDFLSLIKERIDEKG--YWVSY-----SSSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp TTSGGGGSHHHHHHHHTTEEEEE--EEEES-----CCCHHHHHHHHHTTCEEEEEECC
T ss_pred ccCcccCCHHHHHHHHHHhCCCc--EEEEE-----eCcHHHHHHHHHCCCEEEecCCC
Confidence 322 3689999999999999 33322 22345555559999999999644
No 307
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.53 E-value=0.0015 Score=53.83 Aligned_cols=137 Identities=12% Similarity=-0.027 Sum_probs=83.4
Q ss_pred CeEEEECCCCCHHHHHHHHhCC--CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 55 KSVLELGAGAGLPGLTAARLGA--TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~~~--~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.+++|+.||.|.+++.+...|. ..+.++|+++ +.+.-+.|+.. ..+...|+.+...... +...+|+++.+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~-~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVI-KKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHH-HHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHh-ccCCCCEEEec
Confidence 3899999999999999988875 4688999999 88888777632 3455667665543222 22369999999
Q ss_pred ccccCC---------c-chHHHHHHHHHHh---c-CCCceEEEEEeeccC----ChHHHHHHHHHhCCcEEEEEEccC--
Q 046623 132 DVFYDP---------E-EMVGLGKTLKRVC---G-TGRHTVVWAVSEVRT----RTGDCLHELIMSQGFRVIELTCQL-- 191 (218)
Q Consensus 132 ~~~~~~---------~-~~~~~l~~~~~lL---~-~gG~~~i~~~~~~~~----~~~~~~~~~~~~~gf~~~~~~~~~-- 191 (218)
+|+... . ....++..+.+++ + | ..+++ .+-..- .....++.+ ++.|+.+...-+..
T Consensus 77 pPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vl-ENV~gl~~~~~~~~i~~~l-~~~GY~v~~~vl~a~~ 152 (333)
T 4h0n_A 77 PPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILM-ENVKGFENSTVRNLFIDKL-KECNFIYQEFLLCPST 152 (333)
T ss_dssp CCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEE-EECTTGGGSHHHHHHHHHH-HHTTEEEEEEEECTTT
T ss_pred CCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEE-ecchhhhhhhHHHHHHHHH-HhCCCeEEEEEecHHH
Confidence 987531 1 1223444444554 3 5 23333 333211 133444444 88998886653322
Q ss_pred --CCCCCCceeEE
Q 046623 192 --GGGCPEAFAVY 202 (218)
Q Consensus 192 --~~~~~~~~~l~ 202 (218)
-|..+.+..+.
T Consensus 153 ~GvPQ~R~R~fiv 165 (333)
T 4h0n_A 153 VGVPNSRLRYYCT 165 (333)
T ss_dssp TTCSCCCCEEEEE
T ss_pred cCCCccceEEEEE
Confidence 33455555553
No 308
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.34 E-value=0.0005 Score=55.72 Aligned_cols=77 Identities=19% Similarity=0.088 Sum_probs=57.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCe--EEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEE
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATR--VVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVI 129 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~--v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv 129 (218)
.+.+++|+.||.|.+++.+.+.|... +.++|+++ +.+..+.|.. ...+...|+.+.........+.+|+++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCEEE
Confidence 45589999999999999998888754 69999999 8887776642 245667777765543322235799999
Q ss_pred Eccccc
Q 046623 130 MSDVFY 135 (218)
Q Consensus 130 ~~~~~~ 135 (218)
.++|+.
T Consensus 89 ggpPCQ 94 (295)
T 2qrv_A 89 GGSPCN 94 (295)
T ss_dssp ECCCCG
T ss_pred ecCCCc
Confidence 998874
No 309
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.20 E-value=0.00034 Score=71.33 Aligned_cols=100 Identities=16% Similarity=0.101 Sum_probs=49.0
Q ss_pred CCCeEEEECCCCCHHHHHHH-HhC-----CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCC
Q 046623 53 QNKSVLELGAGAGLPGLTAA-RLG-----ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~-~~~-----~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 125 (218)
+..+|||+|+|+|.....+. ..+ ..+++.+|+++ +.+.+++.++... +.....|..+.. .....+|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~~---~~~~~~y 1312 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANPA---PGSLGKA 1312 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCCC---C-----C
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccccccc---cCCCCce
Confidence 45699999999997654432 211 23799999999 8888888775531 332222222210 0023569
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i 159 (218)
|+|++.+++|...+....+.+++++|+|||.+++
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp CEEEEECC--------------------CCEEEE
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEE
Confidence 9999999998888889999999999999994443
No 310
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.02 E-value=0.0015 Score=54.17 Aligned_cols=58 Identities=16% Similarity=0.097 Sum_probs=47.3
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
++..|||||+|.|.++..++.. .+.+|+++|+++ .+..+++.. . ..+++++.+|..+.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 4689999999999999999865 356899999999 888887765 2 25689999988544
No 311
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.64 E-value=0.0063 Score=51.46 Aligned_cols=61 Identities=18% Similarity=0.110 Sum_probs=47.3
Q ss_pred CCCCeEEEECCCCCHHHHHHH-HhC-C-CeEEEecCcc-hHHHHHHHHHH--hCCC-CceEEEEeecC
Q 046623 52 FQNKSVLELGAGAGLPGLTAA-RLG-A-TRVVLTDVKP-LLPGLINNVEA--NGLG-GRVEVRELVWG 112 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l~-~~~-~-~~v~~~D~~~-~~~~a~~~~~~--~~~~-~~~~~~~~d~~ 112 (218)
.++..++|+|++.|..++.++ +.. . .+|+++|+++ ..+.+++|++. |+.. .++.++..-+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 467899999999999999876 443 2 6999999999 99999999988 4322 45666654443
No 312
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.61 E-value=0.0013 Score=53.89 Aligned_cols=48 Identities=19% Similarity=0.253 Sum_probs=41.6
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhC
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANG 99 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~ 99 (218)
..++..|||..||+|+.+..+.+.|. +.+++|+++ .++.+++++...+
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcc
Confidence 35788999999999999999988875 999999999 9999888875443
No 313
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.39 E-value=0.0047 Score=50.65 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=54.6
Q ss_pred CCCCCeEEEECCCCCHHHHHHHHh-C-CCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc--cccCCCC
Q 046623 51 DFQNKSVLELGAGAGLPGLTAARL-G-ATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ--LSELGEF 125 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l~~~-~-~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~ 125 (218)
..++..++|..+|.|..+..+++. + ..+|+++|.++ +++.++ ++ ...++.++..++.+..... ....+++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 357889999999999999998754 3 36999999999 998874 33 1356888887765542100 0011368
Q ss_pred cEEEEccc
Q 046623 126 DMVIMSDV 133 (218)
Q Consensus 126 D~Iv~~~~ 133 (218)
|.|+++--
T Consensus 130 DgILfDLG 137 (347)
T 3tka_A 130 DGILLDLG 137 (347)
T ss_dssp EEEEEECS
T ss_pred cEEEECCc
Confidence 98887543
No 314
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.96 E-value=0.0039 Score=53.83 Aligned_cols=79 Identities=14% Similarity=0.026 Sum_probs=54.8
Q ss_pred CCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-------------c
Q 046623 54 NKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-------------L 119 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-------------~ 119 (218)
..+++|+.||.|.+++.+.+.|...+.++|+++ +++.-+.|+... ....++..|+.+..... .
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhh
Confidence 358999999999999999888876689999999 888877775211 12344555654332100 0
Q ss_pred ccCCCCcEEEEccccc
Q 046623 120 SELGEFDMVIMSDVFY 135 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~ 135 (218)
.....+|+++.++|+.
T Consensus 165 ~~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQ 180 (482)
T ss_dssp HHSCCCSEEEEECCCC
T ss_pred hcCCCCCEEEecCCCc
Confidence 1235689999998875
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.87 E-value=0.012 Score=46.48 Aligned_cols=135 Identities=14% Similarity=0.007 Sum_probs=83.3
Q ss_pred CCeEEEECCCCCHHHHHHHHh--------CCCeEEEecCcc-hH------------------------HHHHHHH-----
Q 046623 54 NKSVLELGAGAGLPGLTAARL--------GATRVVLTDVKP-LL------------------------PGLINNV----- 95 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~--------~~~~v~~~D~~~-~~------------------------~~a~~~~----- 95 (218)
+..|+|+|+-.|..+..++.. ...++++.|.-+ +- +...+.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 449999999999888876432 236899988221 11 1122211
Q ss_pred -HHhCC-CCceEEEEeecCCCCcccc--ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeec---cCC
Q 046623 96 -EANGL-GGRVEVRELVWGSDDLSQL--SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEV---RTR 168 (218)
Q Consensus 96 -~~~~~-~~~~~~~~~d~~~~~~~~~--~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~---~~~ 168 (218)
+..+. .++++++.+++.+...... .+..++|++.+..-.| ......++.+..+|+||| +|+...-. -+.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y--~~t~~~le~~~p~l~~GG--vIv~DD~~~~~w~G 225 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLY--EPTKAVLEAIRPYLTKGS--IVAFDELDNPKWPG 225 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCH--HHHHHHHHHHGGGEEEEE--EEEESSTTCTTCTH
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCccc--chHHHHHHHHHHHhCCCc--EEEEcCCCCCCChH
Confidence 12233 3679999988765432211 1345799999854322 334567888889999999 44443321 134
Q ss_pred hHHHHHHHHHhCCcEEEEEEccCC
Q 046623 169 TGDCLHELIMSQGFRVIELTCQLG 192 (218)
Q Consensus 169 ~~~~~~~~~~~~gf~~~~~~~~~~ 192 (218)
..+.+.+.+.+.+..+...|....
T Consensus 226 ~~~A~~ef~~~~~~~i~~~p~~~~ 249 (257)
T 3tos_A 226 ENIAMRKVLGLDHAPLRLLPGRPA 249 (257)
T ss_dssp HHHHHHHHTCTTSSCCEECTTCSC
T ss_pred HHHHHHHHHhhCCCeEEEccCCCC
Confidence 666677776788888888776654
No 316
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.83 E-value=0.2 Score=41.61 Aligned_cols=131 Identities=15% Similarity=0.071 Sum_probs=80.7
Q ss_pred ccccccchhHHHH-HHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCc-eEE
Q 046623 30 LTGAWLWDSALIL-AQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGR-VEV 106 (218)
Q Consensus 30 ~~g~~~w~~~~~l-~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~-~~~ 106 (218)
...+..||.+..+ .+.+... ..+.+||.++.+.|.++..++..+. +.+.-|- +...++.|++.|++... +.+
T Consensus 16 ~~~l~a~da~d~~ll~~~~~~--~~~~~~~~~~d~~gal~~~~~~~~~---~~~~ds~~~~~~~~~n~~~~~~~~~~~~~ 90 (375)
T 4dcm_A 16 VNPLQAWEAADEYLLQQLDDT--EIRGPVLILNDAFGALSCALAEHKP---YSIGDSYISELATRENLRLNGIDESSVKF 90 (375)
T ss_dssp SCSCCSCCHHHHHHHHTTTTC--CCCSCEEEECCSSSHHHHHTGGGCC---EEEESCHHHHHHHHHHHHHTTCCGGGSEE
T ss_pred CCCCCccchHHHHHHHhhhhc--cCCCCEEEECCCCCHHHHhhccCCc---eEEEhHHHHHHHHHHHHHHcCCCccceEe
Confidence 3567889986543 2222221 2456899999999999988865433 4443244 66678899999988642 454
Q ss_pred EEeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHH
Q 046623 107 RELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 107 ~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~ 176 (218)
.. ..+. ....+|+|+..-| -+.......+..+...|++++. +++....+.......+.+
T Consensus 91 ~~--~~~~------~~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~--i~~~g~~~~~~~~~~~~l 149 (375)
T 4dcm_A 91 LD--STAD------YPQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTR--IIAGAKARDIHTSTLELF 149 (375)
T ss_dssp EE--TTSC------CCSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSE--EEEEEEGGGCCHHHHHHH
T ss_pred cc--cccc------cccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCE--EEEEecccchHHHHHHHH
Confidence 42 2221 3467999998444 2334556677777777888883 344445455544444444
No 317
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.66 E-value=0.013 Score=47.94 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=42.1
Q ss_pred hHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc----hHHHHHHHHHH
Q 046623 38 SALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP----LLPGLINNVEA 97 (218)
Q Consensus 38 ~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~----~~~~a~~~~~~ 97 (218)
-...|.+.+......++..|||..||+|..+..+.+.+. +.+++|+++ .++.+++++..
T Consensus 227 kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 227 KPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHH
Confidence 334444454442335788999999999999999999875 999999997 34555555543
No 318
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.59 E-value=0.023 Score=45.73 Aligned_cols=83 Identities=10% Similarity=-0.020 Sum_probs=50.3
Q ss_pred ceEEEEeecCCCCccccccCCCCcEEEEcccccCCcc--------------------hHHHHHHHHHHhcCCCceEEEEE
Q 046623 103 RVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEE--------------------MVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 103 ~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~--------------------~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
.+.++.+|+.+... ..+.++||+|++++|+....+ +..++..+.++|+|||.+++.+.
T Consensus 21 ~~~i~~gD~~~~l~--~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLA--SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHT--TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHh--hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 46788887754211 114578999999998853211 24567788999999995555443
Q ss_pred eec-------c---CChHHHHHHHHHhCCcEEEEE
Q 046623 163 SEV-------R---TRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 163 ~~~-------~---~~~~~~~~~~~~~~gf~~~~~ 187 (218)
... + ......+..++.+.||.....
T Consensus 99 d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 99 DVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp CEEEECC----EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred CCccccccCCcccccccHHHHHHHHHHcCCeeecc
Confidence 221 0 012233444458889987654
No 319
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.39 E-value=0.2 Score=45.80 Aligned_cols=42 Identities=17% Similarity=0.064 Sum_probs=34.8
Q ss_pred CCeEEEECCCCCHHHHHHHHhC------CCeEEEecCcc-hHHHHHHHH
Q 046623 54 NKSVLELGAGAGLPGLTAARLG------ATRVVLTDVKP-LLPGLINNV 95 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~~------~~~v~~~D~~~-~~~~a~~~~ 95 (218)
..+||||.||.|.++.-+.+.| ..-+.++|+++ |++.-+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4579999999999999886665 23578999999 998888874
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.20 E-value=0.096 Score=47.12 Aligned_cols=127 Identities=17% Similarity=0.090 Sum_probs=73.3
Q ss_pred CCeEEEECCCCCHHHHHHHHh-----------C--CCeEEEecCcc-hHHHHHHHH--------------HHhCC-----
Q 046623 54 NKSVLELGAGAGLPGLTAARL-----------G--ATRVVLTDVKP-LLPGLINNV--------------EANGL----- 100 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~-----------~--~~~v~~~D~~~-~~~~a~~~~--------------~~~~~----- 100 (218)
..+|+|+|.|+|...+.+.+. . ..+++++|..| ..+.+++.. .....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 458999999999876665221 1 14789999866 544444321 11100
Q ss_pred -----C---CceEEEEeecCCCCcccc-ccCCCCcEEEEcccccC---Cc-chHHHHHHHHHHhcCCCceEEEEEeeccC
Q 046623 101 -----G---GRVEVRELVWGSDDLSQL-SELGEFDMVIMSDVFYD---PE-EMVGLGKTLKRVCGTGRHTVVWAVSEVRT 167 (218)
Q Consensus 101 -----~---~~~~~~~~d~~~~~~~~~-~~~~~~D~Iv~~~~~~~---~~-~~~~~l~~~~~lL~~gG~~~i~~~~~~~~ 167 (218)
. ..+++..+|..+...... .....+|.++. |.|.. .+ -...++..+.+++++|| .+...
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~fl-D~f~p~~np~~w~~~~~~~l~~~~~~g~--~~~t~----- 210 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFL-DGFAPAKNPDMWNEQLFNAMARMTRPGG--TFSTF----- 210 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEE-CSSCC--CCTTCSHHHHHHHHHHEEEEE--EEEES-----
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEE-CCCCCCCChhhhhHHHHHHHHHHhCCCC--EEEec-----
Confidence 0 123444455433321100 01467999998 44421 11 24788999999999988 22221
Q ss_pred ChHHHHHHHHHhCCcEEEEEE
Q 046623 168 RTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 168 ~~~~~~~~~~~~~gf~~~~~~ 188 (218)
.....++..+.+.||.+...+
T Consensus 211 ~~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 211 TAAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp CCCHHHHHHHHHTTCEEEEEE
T ss_pred cCcHHHHHHHHhCCeEEEecc
Confidence 122345555589999998875
No 321
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=94.90 E-value=0.33 Score=40.81 Aligned_cols=44 Identities=11% Similarity=-0.026 Sum_probs=35.9
Q ss_pred CCeEEEECCCCCHHHHHHHHhC--CCe----EEEecCcc-hHHHHHHHHHH
Q 046623 54 NKSVLELGAGAGLPGLTAARLG--ATR----VVLTDVKP-LLPGLINNVEA 97 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~~~~--~~~----v~~~D~~~-~~~~a~~~~~~ 97 (218)
..+|+|+.||.|..+..+.+.| ..- |.++|+++ +...-+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 3589999999999999997766 233 88899999 98888888743
No 322
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.83 E-value=0.083 Score=49.50 Aligned_cols=77 Identities=12% Similarity=0.013 Sum_probs=53.1
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC------------CCccc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS------------DDLSQ 118 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~------------~~~~~ 118 (218)
...+++||.||.|.+++.+.+.|. .-+.++|+++ +.+.-+.|.. ...++..|+.. .....
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhhhh
Confidence 445899999999999999988886 4688999999 8887776642 23444444321 11111
Q ss_pred cccCCCCcEEEEccccc
Q 046623 119 LSELGEFDMVIMSDVFY 135 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~ 135 (218)
....+.+|+|+.++|+.
T Consensus 613 lp~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 613 LPQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp CCCTTTCSEEEECCCCT
T ss_pred cccCCCeeEEEEcCCCc
Confidence 11235799999998874
No 323
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.31 E-value=0.37 Score=39.46 Aligned_cols=107 Identities=14% Similarity=0.035 Sum_probs=64.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHh-CCCeEEEecCcchHHHHHHHHHHhC--------------------CCCceEEEEeec
Q 046623 53 QNKSVLELGAGAGLPGLTAARL-GATRVVLTDVKPLLPGLINNVEANG--------------------LGGRVEVRELVW 111 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~-~~~~v~~~D~~~~~~~a~~~~~~~~--------------------~~~~~~~~~~d~ 111 (218)
+...|+.||||.....-.+... +...++-+|....++.-++.+...+ ...+..++.+|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 4568999999999888887654 3335555555334444444444431 125688999998
Q ss_pred CCCCc-----cccccCCCCcEEEEcccccC--CcchHHHHHHHHHHhcCCCceEEE
Q 046623 112 GSDDL-----SQLSELGEFDMVIMSDVFYD--PEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 112 ~~~~~-----~~~~~~~~~D~Iv~~~~~~~--~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+... ......+...++++-.++.+ .+...++++.+.+.. |+|.++++
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEE
Confidence 87532 11112234566666555544 356778888888776 66633333
No 324
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.18 E-value=0.086 Score=42.95 Aligned_cols=82 Identities=12% Similarity=-0.093 Sum_probs=49.3
Q ss_pred ceEEEEeecCCCCccccccCCCCcEEEEcccccCCc--------------chHHHHHHHHHHhcCCCceEEEEEeeccC-
Q 046623 103 RVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPE--------------EMVGLGKTLKRVCGTGRHTVVWAVSEVRT- 167 (218)
Q Consensus 103 ~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~--------------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~- 167 (218)
...++.+|...... ..+.+++|+|++++|+.... .+.+.+..+.++|+|+|.+++.+......
T Consensus 14 ~~~ii~gD~~~~l~--~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g 91 (323)
T 1boo_A 14 NGSMYIGDSLELLE--SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKG 91 (323)
T ss_dssp SEEEEESCHHHHGG--GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETT
T ss_pred CceEEeCcHHHHHh--hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCC
Confidence 35667766543211 11467899999988875431 46788888999999999444443322101
Q ss_pred -------ChHHHHHHHHHhCCcEEEEE
Q 046623 168 -------RTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 168 -------~~~~~~~~~~~~~gf~~~~~ 187 (218)
.....+. +++..||.....
T Consensus 92 ~~~~~~~~~~~i~~-~~~~~Gf~~~~~ 117 (323)
T 1boo_A 92 VPARSIYNFRVLIR-MIDEVGFFLAED 117 (323)
T ss_dssp EEEECCHHHHHHHH-HHHTTCCEEEEE
T ss_pred CcccccchHHHHHH-HHHhCCCEEEEE
Confidence 1222333 337889987654
No 325
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.86 E-value=0.23 Score=44.50 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=38.8
Q ss_pred CCCCcEEEEcccccCC--c--chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEE
Q 046623 122 LGEFDMVIMSDVFYDP--E--EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELT 188 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~--~--~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~ 188 (218)
...+|.++. |.|... + -..+++..+.+++++|| .+... .....++..+.+.||.+...+
T Consensus 177 ~~~~d~~~~-D~f~p~~np~~w~~~~~~~l~~~~~~g~--~~~t~-----~~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFL-DGFAPAKNPDMWTQNLFNAMARLARPGG--TLATF-----TSAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEE-CCSCGGGCGGGSCHHHHHHHHHHEEEEE--EEEES-----CCCHHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEE-CCCCCcCChhhhhHHHHHHHHHHhCCCC--EEEec-----cCcHHHHHHHHhCCeEEEecc
Confidence 367999998 444321 1 24778999999999998 22221 112345555588999998875
No 326
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.27 E-value=0.17 Score=48.81 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=52.8
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCC-CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecC------------CCCccc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGA-TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWG------------SDDLSQ 118 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~-~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~------------~~~~~~ 118 (218)
+..+++||.||.|.+++.+.+.|. .-+.++|+++ +++.-+.|.. ...+...|+. ......
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP------GTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT------TSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 345899999999999999988885 4588999999 8888777742 2334433322 110001
Q ss_pred cccCCCCcEEEEcccccC
Q 046623 119 LSELGEFDMVIMSDVFYD 136 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~~~~ 136 (218)
....+.+|+|+.++|+..
T Consensus 924 lp~~~~vDvl~GGpPCQ~ 941 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQG 941 (1330)
T ss_dssp CCCTTTCSEEEECCCCTT
T ss_pred ccccCccceEEecCCCcc
Confidence 112347899999998853
No 327
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.25 E-value=0.19 Score=39.51 Aligned_cols=63 Identities=5% Similarity=0.041 Sum_probs=39.6
Q ss_pred cCCCCcEEEEcccccCC-c-------------chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEE
Q 046623 121 ELGEFDMVIMSDVFYDP-E-------------EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIE 186 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~-~-------------~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~ 186 (218)
+.+++|+|++++|+... . .....++.+.++|+++|. +++... ......+..++.+.||....
T Consensus 20 ~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~--i~v~~~--d~~~~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGS--LYIFNT--PFNCAFICQYLVSKGMIFQN 95 (260)
T ss_dssp CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEE--EEEEEC--HHHHHHHHHHHHHTTCEEEE
T ss_pred cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeE--EEEEcC--cHHHHHHHHHHHhhccceeE
Confidence 44689999998777543 1 345677788899999993 333322 12223333344788998766
Q ss_pred E
Q 046623 187 L 187 (218)
Q Consensus 187 ~ 187 (218)
.
T Consensus 96 ~ 96 (260)
T 1g60_A 96 W 96 (260)
T ss_dssp E
T ss_pred E
Confidence 4
No 328
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.08 E-value=0.17 Score=41.15 Aligned_cols=94 Identities=20% Similarity=0.128 Sum_probs=58.1
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c-ccCCCC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L-SELGEF 125 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~-~~~~~~ 125 (218)
..++.+||-.|+| .|..++.+++. |+ +|+++|.++ ..+.+++ .|.. .++ |..+....+ . ...+.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~i--~~~~~~~~~~~~~~~g~~ 233 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE---VAV--NARDTDPAAWLQKEIGGA 233 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEE--ETTTSCHHHHHHHHHSSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC---EEE--eCCCcCHHHHHHHhCCCC
Confidence 3578899999987 36777777654 55 999999988 7776643 3432 222 222222111 1 112368
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+++-... ....++.+.++|+++|+++++
T Consensus 234 d~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 234 HGVLVTAV------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEESSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEEeCC------CHHHHHHHHHHhccCCEEEEe
Confidence 88875321 245778888999999955444
No 329
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.86 E-value=0.2 Score=41.27 Aligned_cols=95 Identities=23% Similarity=0.179 Sum_probs=57.7
Q ss_pred CCCCCeEEEECCCC-CHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-cccc--cCCC
Q 046623 51 DFQNKSVLELGAGA-GLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQLS--ELGE 124 (218)
Q Consensus 51 ~~~~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~--~~~~ 124 (218)
..++.+||-+|+|. |..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+... +... ..+.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGAT---HVI--NSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCS---EEE--ETTTSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCC---EEe--cCCccCHHHHHHHhcCCC
Confidence 35788999999864 566666664 5665799999988 7777653 2422 222 2222211 1111 1237
Q ss_pred CcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 125 FDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 125 ~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+|+-.-. ....++.+.++|+++|+++++
T Consensus 259 ~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALESTG------SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEEECSC------CHHHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEECCC------CHHHHHHHHHHHhcCCEEEEe
Confidence 999884211 135678888999999955544
No 330
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=92.49 E-value=0.49 Score=38.29 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=60.0
Q ss_pred CeEEEECCCCCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCC--CCceEEEEeecCCCCccccccC-----CCCcE
Q 046623 55 KSVLELGAGAGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGL--GGRVEVRELVWGSDDLSQLSEL-----GEFDM 127 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~-----~~~D~ 127 (218)
..|++||||-=.....+......+++=+|....++..++.+...+. ..+..++.+|+.+ .+...... +..-+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEE
Confidence 5799999996555443331112477777743367666666665432 3567888899887 32221111 22335
Q ss_pred EEEcccccCC--cchHHHHHHHHHHhcCCC
Q 046623 128 VIMSDVFYDP--EEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 128 Iv~~~~~~~~--~~~~~~l~~~~~lL~~gG 155 (218)
+++-.++++. +....+++.+...+.||+
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs 212 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGS 212 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTC
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCe
Confidence 5555555543 456778888888777877
No 331
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.33 E-value=0.75 Score=38.43 Aligned_cols=43 Identities=26% Similarity=0.329 Sum_probs=30.7
Q ss_pred CCCeEEEECCCCCHHHHHHHHh--------CCCeEEEecCcc-hHHHHHHHH
Q 046623 53 QNKSVLELGAGAGLPGLTAARL--------GATRVVLTDVKP-LLPGLINNV 95 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~--------~~~~v~~~D~~~-~~~~a~~~~ 95 (218)
.+..|+|+|+|.|.++..+.+. ...+++.+|+|+ ..+..++.+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 3457999999999998766321 224899999999 555444444
No 332
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.97 E-value=1.3 Score=36.06 Aligned_cols=95 Identities=21% Similarity=0.165 Sum_probs=56.5
Q ss_pred CCCCCeEEEECCCC-CHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC---CC-ccccc--c
Q 046623 51 DFQNKSVLELGAGA-GLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS---DD-LSQLS--E 121 (218)
Q Consensus 51 ~~~~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~-~~~~~--~ 121 (218)
..++.+||-+|+|. |..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |... .. ..... .
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVL--QISKESPQEIARKVEGQL 239 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEE--ECSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEE--cCcccccchHHHHHHHHh
Confidence 35788999999863 556666665 4555899999888 7766643 3432 222 2220 11 00110 1
Q ss_pred CCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 122 LGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
...+|+|+-.-. ....+....++|+++|+++.+
T Consensus 240 ~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIECTG------AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEE
Confidence 157999985221 134677788899999955544
No 333
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.90 E-value=1.3 Score=36.05 Aligned_cols=94 Identities=24% Similarity=0.144 Sum_probs=55.7
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC-CC-ccccc---c-
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS-DD-LSQLS---E- 121 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~---~- 121 (218)
..++.+||-.|+| .|..++.+++ .|+ +|+++|.++ ..+.+++ .+.. .++ |..+ .. ..... .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~--~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGAD---VTL--VVDPAKEEESSIIERIRS 235 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEE--ECCTTTSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCCC---EEE--cCcccccHHHHHHHHhcc
Confidence 3578899999975 2555555554 455 699999888 7766643 3432 222 2221 11 11111 1
Q ss_pred --CCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 122 --LGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 122 --~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
...+|+|+-.-. ....++.+.++|+++|+++.+
T Consensus 236 ~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 236 AIGDLPNVTIDCSG------NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HSSSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEEC
T ss_pred ccCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEE
Confidence 257999985221 134677788899999955444
No 334
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.33 E-value=0.3 Score=39.84 Aligned_cols=88 Identities=16% Similarity=0.057 Sum_probs=54.0
Q ss_pred CCCCCeEEEECCCC-CHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 51 DFQNKSVLELGAGA-GLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 51 ~~~~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
..++.+||=.|+|. |..++.+++ .|+ +|++++.++ ..+.+++ .|.. .++ .+ .. . ....+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~---~~--~--~~~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVK---HFY-TD---PK--Q--CKEELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCS---EEE-SS---GG--G--CCSCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCC---eec-CC---HH--H--HhcCCCE
Confidence 35788999999863 555666664 455 999999998 7777654 3432 222 11 11 1 1227999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+- +.... ..+..+.++|+++|+++++
T Consensus 238 vid--~~g~~----~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 238 IIS--TIPTH----YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEE--CCCSC----CCHHHHHTTEEEEEEEEEC
T ss_pred EEE--CCCcH----HHHHHHHHHHhcCCEEEEE
Confidence 884 22221 2456677889999955544
No 335
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.13 E-value=0.69 Score=38.12 Aligned_cols=95 Identities=24% Similarity=0.214 Sum_probs=56.9
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc-----c
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS-----E 121 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~-----~ 121 (218)
..++.+||=.|+| .|..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+.... ... .
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT---ATV--DPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---EEE--CTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---EEE--CCCCcCHHHHHHhhhhcc
Confidence 3578899999985 2555555564 4555899999988 7766654 3432 222 22222111 110 1
Q ss_pred CCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 122 LGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+.+|+|+-. .. ....++.+.++|+++|+++++
T Consensus 251 ~gg~Dvvid~--~G----~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIEC--AG----VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEEC--SC----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEEC--CC----CHHHHHHHHHHhccCCEEEEE
Confidence 2479998842 11 145678888999999955544
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.08 E-value=1 Score=36.92 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=57.4
Q ss_pred CCCeEEEEC-CC-CCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc--cCCCCc
Q 046623 53 QNKSVLELG-AG-AGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS--ELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG-~G-~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~D 126 (218)
++.+||=.| +| .|..++.+++. +..+|++++.++ ..+.+++ .|.. .++ |..+....... ..+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi--~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVI--DHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEE--CTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEE--eCCCCHHHHHHHhcCCCce
Confidence 577899988 44 56777777775 566999999988 7776643 3432 222 22221111111 224789
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+-.- .....++.+.++|+++|+++++
T Consensus 242 vvid~~------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTT------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECS------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECC------CchhhHHHHHHHhcCCCEEEEE
Confidence 887421 1245778888999999955544
No 337
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=90.95 E-value=0.95 Score=37.32 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=56.8
Q ss_pred CCCCCeEEEECCC-CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecC--CCCcc-cc--ccC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWG--SDDLS-QL--SEL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~--~~~~~-~~--~~~ 122 (218)
..++.+||=+|+| .|..++.++ ..|+.+|+++|.++ .++.++ ..|.. .++ |.. +.... .. ...
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa~---~vi--~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGVN---EFV--NPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTCC---EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCc---EEE--ccccCchhHHHHHHHhcC
Confidence 3578899999985 355555555 45666899999988 777664 33432 222 221 11111 11 122
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCC-CceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG-RHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g-G~~~i~ 160 (218)
+.+|+|+-. .. ....++.+.++++++ |+++++
T Consensus 262 gg~D~vid~--~g----~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 262 GGVDYSFEC--IG----NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SCBSEEEEC--SC----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEEC--CC----CHHHHHHHHHHhhccCCEEEEE
Confidence 479999842 11 245678888999997 854444
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.62 E-value=1.5 Score=35.99 Aligned_cols=95 Identities=17% Similarity=0.179 Sum_probs=56.7
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC--CCc-cccc--cC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS--DDL-SQLS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~-~~~~--~~ 122 (218)
..++.+||=+|+| .|..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+ ... +... ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECL--NPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEE--ecccccchHHHHHHHHhC
Confidence 3578899999975 3555555554 5665899999988 7777653 3432 222 2221 111 1110 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCC-CceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG-RHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g-G~~~i~ 160 (218)
+.+|+|+-. .. ....+..+.++++++ |+++.+
T Consensus 260 gg~Dvvid~--~g----~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVEC--AG----RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEEC--SC----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEEC--CC----CHHHHHHHHHHHhcCCCEEEEE
Confidence 479999842 11 135677888999999 955444
No 339
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.60 E-value=0.38 Score=39.08 Aligned_cols=81 Identities=6% Similarity=-0.094 Sum_probs=45.6
Q ss_pred eEEE-EeecCCCCccccccCCCCcEEEEcccccCC-------c----chHHHHHHHHHHhcCCCceEEEEEeecc-----
Q 046623 104 VEVR-ELVWGSDDLSQLSELGEFDMVIMSDVFYDP-------E----EMVGLGKTLKRVCGTGRHTVVWAVSEVR----- 166 (218)
Q Consensus 104 ~~~~-~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~-------~----~~~~~l~~~~~lL~~gG~~~i~~~~~~~----- 166 (218)
..++ .+|...... ..+.+++|+|++.+|+... . .+...+..+.++|+|+|.+++.+.....
T Consensus 39 ~~l~i~gD~l~~L~--~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~ 116 (319)
T 1eg2_A 39 RHVYDVCDCLDTLA--KLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGS 116 (319)
T ss_dssp EEEEEECCHHHHHH--TSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTB
T ss_pred ceEEECCcHHHHHH--hCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccccccc
Confidence 4555 666543211 1145689999998877532 1 3566777788999999944333322111
Q ss_pred CChHHHHHHHHHhCC-cEEEEE
Q 046623 167 TRTGDCLHELIMSQG-FRVIEL 187 (218)
Q Consensus 167 ~~~~~~~~~~~~~~g-f~~~~~ 187 (218)
.........+ ...| |.....
T Consensus 117 ~~l~~l~~~i-~~~G~~~~~~~ 137 (319)
T 1eg2_A 117 GDLISIISHM-RQNSKMLLANL 137 (319)
T ss_dssp CCHHHHHHHH-HHHCCCEEEEE
T ss_pred ccHHHHHHHH-hCcccceeEEE
Confidence 1124444444 5556 776554
No 340
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.23 E-value=0.97 Score=35.41 Aligned_cols=80 Identities=18% Similarity=0.185 Sum_probs=57.8
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc------cc
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ------LS 120 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~ 120 (218)
+++++++|==|++.|. .+..+++.|+ +|+.+|.++ .++.+.+.++..+ .++.++.+|+.+...-+ ..
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4678888888887774 3445567777 899999999 8888888887776 44888899987654211 11
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..++.|+++.|.-
T Consensus 81 ~~G~iDiLVNNAG 93 (254)
T 4fn4_A 81 TYSRIDVLCNNAG 93 (254)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 3378999997653
No 341
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.13 E-value=1.1 Score=35.20 Aligned_cols=81 Identities=23% Similarity=0.268 Sum_probs=56.7
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc------cc
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ------LS 120 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~ 120 (218)
+++++++|=-|++.|. .+..+++.|+ +|+.+|.++ .++.+.+.+...+ .++..+.+|+.+...-+ ..
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4678888887877663 3444567777 899999998 8877777777766 34788888887653111 12
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.|.-.
T Consensus 83 ~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 83 EGIHVDILINNAGI 96 (255)
T ss_dssp TTCCCCEEEECCCC
T ss_pred HCCCCcEEEECCCC
Confidence 34689999976544
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.01 E-value=3.5 Score=28.56 Aligned_cols=115 Identities=15% Similarity=0.101 Sum_probs=60.2
Q ss_pred CCeEEEECCCC-CH-HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 54 NKSVLELGAGA-GL-PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 54 ~~~vLDlG~G~-G~-~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
..+|+=+|+|. |. ++..+.+.|. .|+.+|.++ .++.+++ .+ +.++.+|..+...-.......+|.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 34788888863 32 2223345555 899999999 7776553 22 567777765543211112357898887
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
.-+- ......+....+.+.|+. .++... ...+..+.+ .+.|.+....
T Consensus 78 ~~~~---~~~n~~~~~~a~~~~~~~-~iiar~-----~~~~~~~~l-~~~G~d~vi~ 124 (140)
T 3fwz_A 78 TIPN---GYEAGEIVASARAKNPDI-EIIARA-----HYDDEVAYI-TERGANQVVM 124 (140)
T ss_dssp CCSC---HHHHHHHHHHHHHHCSSS-EEEEEE-----SSHHHHHHH-HHTTCSEEEE
T ss_pred ECCC---hHHHHHHHHHHHHHCCCC-eEEEEE-----CCHHHHHHH-HHCCCCEEEC
Confidence 4331 111222333455666766 222222 122333444 6667654443
No 343
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.94 E-value=1.7 Score=33.89 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=50.7
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|+. |.++..+ ++.|. +|+.++.++ ..+.+.+.+...+....+.++.+|+.+... ... .
T Consensus 30 l~~k~vlVTGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 30 WRDRLALVTGAS-GGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GTTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 456778877754 4444444 45565 899999988 777666666655544457788888876531 111 0
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+..
T Consensus 108 ~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 108 QHSGVDICINNAG 120 (279)
T ss_dssp HHCCCSEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 1247999997654
No 344
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.90 E-value=0.49 Score=38.80 Aligned_cols=98 Identities=19% Similarity=0.071 Sum_probs=57.0
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC-CCc-ccc---ccC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS-DDL-SQL---SEL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~---~~~ 122 (218)
..++.+||=+|+| .|..++.+++ .|+..|+++|.++ ..+.+++. .. ..+... .+-.. ... ... ...
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~-~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHK-VERLSAEESAKKIVESFGG 250 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEE-CCSCCHHHHHHHHHHHTSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hccccc-ccccchHHHHHHHHHHhCC
Confidence 3578899999985 3555666664 4664599999998 87777654 11 112222 11000 000 001 023
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+|+- +.. ....+..+.++|+++|+++++
T Consensus 251 ~g~Dvvid--~~g----~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALE--CTG----VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEE--CSC----CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEE--CCC----ChHHHHHHHHHhcCCCEEEEE
Confidence 47999984 211 134677888999999955544
No 345
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=89.81 E-value=0.51 Score=37.63 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=44.4
Q ss_pred CCCcEEEEcccc---cCC----cch----HHHHHHHHHHhcCCCceEEEEEeeccC-ChHHHHHHHHHhCCcEEEEE--E
Q 046623 123 GEFDMVIMSDVF---YDP----EEM----VGLGKTLKRVCGTGRHTVVWAVSEVRT-RTGDCLHELIMSQGFRVIEL--T 188 (218)
Q Consensus 123 ~~~D~Iv~~~~~---~~~----~~~----~~~l~~~~~lL~~gG~~~i~~~~~~~~-~~~~~~~~~~~~~gf~~~~~--~ 188 (218)
+++|+|+++-.. ++. .|. .-+++.+..+|+|||.+++-.... .+ ..+.....+ ...|...++ |
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg-aDr~se~lv~~L--aR~F~~Vr~vKP 281 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY-ADRASESIIGAI--ARQFKFSRVCKP 281 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC-CSHHHHHHHHHH--HTTEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC-CcccHHHHHHHH--HHhcceeeeeCC
Confidence 679999985322 111 111 114455677899999554444322 22 244444444 678888777 5
Q ss_pred ccCCCCCCCceeEEE
Q 046623 189 CQLGGGCPEAFAVYE 203 (218)
Q Consensus 189 ~~~~~~~~~~~~l~~ 203 (218)
...+. ..+.+.+.+
T Consensus 282 ~ASR~-StEvf~La~ 295 (320)
T 2hwk_A 282 KSSLE-ETEVLFVFI 295 (320)
T ss_dssp TTCCS-TTCEEEEEE
T ss_pred CCccc-cceEEEEEE
Confidence 55555 666666644
No 346
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.71 E-value=0.88 Score=37.77 Aligned_cols=100 Identities=25% Similarity=0.270 Sum_probs=59.0
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCC--ccccc---cC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDD--LSQLS---EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~---~~ 122 (218)
..++.+||-+|+| .|..++.+++ .|+.+|+++|.++ .++.+++ .|. +++ +..+.. ..... ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i--~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIA--DLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEE--ccCCcchHHHHHHHHhCC
Confidence 3578899999976 3666666665 4655799999988 7777643 342 322 322221 11111 12
Q ss_pred CCCcEEEEccccc---------CCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFY---------DPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~---------~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+|+-.-.-. +.......++.+.++|+++|+++++
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 4699998422110 1122345788888999999955443
No 347
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.57 E-value=4.2 Score=31.70 Aligned_cols=81 Identities=23% Similarity=0.301 Sum_probs=50.7
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc--hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP--LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
..+++++|=-|++.|. ++..+++.|. +|+.++.+. ..+.+.+.++..+ .++.++.+|+.+...- ..
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 3678888888877653 3334466676 788886554 5555555555555 4588888888765311 11
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 105 EALGGLDILVNSAGI 119 (271)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCcEEEECCCC
Confidence 122479999976543
No 348
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.54 E-value=3.6 Score=32.08 Aligned_cols=80 Identities=25% Similarity=0.297 Sum_probs=50.3
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCc------------c-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVK------------P-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~------------~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
.+++++|=-|++.|. ++..+++.|. +|+.+|.+ . .++.+...+...+ .++.++.+|+.+..
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 567788888876653 3334456676 89999876 4 5555555555544 45888999987653
Q ss_pred cc-cc-----ccCCCCcEEEEcccc
Q 046623 116 LS-QL-----SELGEFDMVIMSDVF 134 (218)
Q Consensus 116 ~~-~~-----~~~~~~D~Iv~~~~~ 134 (218)
.- .. ...++.|+++.+.-.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 21 10 112579999976544
No 349
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.20 E-value=0.07 Score=39.82 Aligned_cols=93 Identities=19% Similarity=0.078 Sum_probs=53.9
Q ss_pred CCCCCeEEEECCC--CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc---cC
Q 046623 51 DFQNKSVLELGAG--AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS---EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G--~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~---~~ 122 (218)
..++++||-.|++ .|.....++ ..|+ +|++++.++ ..+.+++ .+.. .+ .|..+.... ... ..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~---~~--~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE---YV--GDSRSVDFADEILELTDG 105 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS---EE--EETTCSTHHHHHHHHTTT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC---EE--eeCCcHHHHHHHHHHhCC
Confidence 3577899999953 344444443 4566 899999887 6655432 3321 12 244332211 111 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+++.+.. ...++.+.++|+++|+++.+
T Consensus 106 ~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 36999985321 24677888899999944443
No 350
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.19 E-value=3.1 Score=32.34 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=49.5
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc--hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP--LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.+. ..+.+.+.++..+ .++.++.+|+.+...- .. .
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 567788877766553 2333456666 888877654 5666666666555 4588889998765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 93 ~~g~id~lvnnAg~ 106 (270)
T 3is3_A 93 HFGHLDIAVSNSGV 106 (270)
T ss_dssp HHSCCCEEECCCCC
T ss_pred HcCCCCEEEECCCC
Confidence 12578999976443
No 351
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=89.18 E-value=1.7 Score=35.71 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=56.5
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC--CCc-cccc--cC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS--DDL-SQLS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~-~~~~--~~ 122 (218)
..++.+||=+|+| .|..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+ ... +... ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi--~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCL--NPRELDKPVQDVITELTA 263 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEE--ccccccchHHHHHHHHhC
Confidence 3578899999975 3555555564 4555899999988 7776643 3432 222 2221 111 1110 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCC-CceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG-RHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g-G~~~i~ 160 (218)
+.+|+|+-. .. ....+..+.++++++ |+++++
T Consensus 264 ~g~Dvvid~--~G----~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDC--AG----TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEES--SC----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCccEEEEC--CC----CHHHHHHHHHHhhcCCCEEEEE
Confidence 479999842 11 135677888999999 955444
No 352
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.92 E-value=2.4 Score=35.29 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=54.7
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc---ccCC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL---SELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~---~~~~ 123 (218)
..++.+||=+|+| .|..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+.... .. -...
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGAD---HVI--DPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---EEE--CTTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---EEE--cCCCCCHHHHHHHHhCCC
Confidence 3578899999985 3455555554 4555899999988 7776653 3422 222 22222111 11 1123
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHh----cCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVC----GTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL----~~gG~~~i~ 160 (218)
.+|+|+- +. ......+..+.++| +++|+++++
T Consensus 282 g~D~vid--~~---g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 282 GAKLFLE--AT---GVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CCSEEEE--CS---SCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCEEEE--CC---CCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 6999984 22 22223555566666 999955544
No 353
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.78 E-value=4 Score=32.19 Aligned_cols=79 Identities=16% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc--hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP--LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+..+..+ .++.++.+|+.+...- .. .
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467788888876553 2333456666 899998876 3444444444444 4588889998765311 10 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+..|+++.+.-
T Consensus 122 ~~g~iD~lvnnAg 134 (291)
T 3ijr_A 122 QLGSLNILVNNVA 134 (291)
T ss_dssp HHSSCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 2257999997643
No 354
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.45 E-value=2.6 Score=34.53 Aligned_cols=95 Identities=19% Similarity=0.179 Sum_probs=56.5
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC--CCc-cccc--cC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS--DDL-SQLS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~-~~~~--~~ 122 (218)
..++.+||-+|+| .|..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+ ... +... ..
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGAT---ECI--NPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCS---EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---eEe--ccccccccHHHHHHHHhC
Confidence 3578899999975 3455555554 5665899999988 7777653 3432 222 2221 111 1110 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCC-CceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG-RHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g-G~~~i~ 160 (218)
+.+|+|+-.-. ....+..+.++++++ |+++.+
T Consensus 259 ~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFECIG------NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCC------cHHHHHHHHHhhccCCcEEEEE
Confidence 47999984211 135677888999999 955544
No 355
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.17 E-value=0.67 Score=37.79 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=56.2
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc---ccCC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL---SELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~---~~~~ 123 (218)
..++.+||=+|+| .|..++.+++. |+.+|+++|.++ ..+.+++ .|.. .++ |..+.... .. -...
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGAT---DII--NYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCC---EEE--CGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCc---eEE--cCCCcCHHHHHHHHcCCC
Confidence 3578899999876 35555566654 555899999988 6776654 3432 222 21111111 11 1123
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+|+- +... ...+..+.++|+++|+++.+
T Consensus 235 g~D~v~d--~~g~----~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVI--AGGD----VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEE--CSSC----TTHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEE--CCCC----hHHHHHHHHHHhcCCEEEEe
Confidence 6999984 2211 24677788899999955544
No 356
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.16 E-value=4.4 Score=27.88 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=42.7
Q ss_pred CCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 54 NKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
..+|+=+|+| .++..+ .+.|. +|+.+|.++ .++.++.. + ..++.+|..+...-.......+|.|
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~----~----~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE----G----FDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT----T----CEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC----C----CcEEECCCCCHHHHHhCCcccCCEE
Confidence 4578888885 344443 44555 899999998 76665432 2 5677777665432111123578998
Q ss_pred EEccc
Q 046623 129 IMSDV 133 (218)
Q Consensus 129 v~~~~ 133 (218)
+...+
T Consensus 75 i~~~~ 79 (141)
T 3llv_A 75 LITGS 79 (141)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 87444
No 357
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.14 E-value=0.57 Score=38.47 Aligned_cols=93 Identities=17% Similarity=0.081 Sum_probs=55.0
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc---ccCC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL---SELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~---~~~~ 123 (218)
..++.+||=+|+| .|..++.+++. |+ +|++++.++ ..+.+++ .|.. .++ |...... ... ....
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFA----LGAD---HGI--NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HTCS---EEE--ETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHH----cCCC---EEE--cCCcccHHHHHHHHhCCC
Confidence 3578899999976 35555566654 55 999999987 7766543 3432 222 2111111 111 1223
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+|+-.-. ...+..+.++|+++|+++++
T Consensus 257 g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 257 GADHILEIAG-------GAGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp CEEEEEEETT-------SSCHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC-------hHHHHHHHHHhhcCCEEEEE
Confidence 7999884222 13466677899999955554
No 358
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=88.13 E-value=4.4 Score=31.51 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=52.0
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccccCCCCc
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLSELGEFD 126 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~D 126 (218)
+++++++|==|++.|. .+..+++.|+ +|+.+|.+.. +.+.+.++..+ .++..+.+|+.+...- .....++.|
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~-~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP-DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC-HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH-HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 3678888887877773 3445577777 8999998753 23334444555 3478888898765421 223457899
Q ss_pred EEEEcccc
Q 046623 127 MVIMSDVF 134 (218)
Q Consensus 127 ~Iv~~~~~ 134 (218)
+++.|.-.
T Consensus 82 iLVNNAGi 89 (247)
T 4hp8_A 82 ILVNNAGI 89 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99976543
No 359
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=88.11 E-value=5.6 Score=29.90 Aligned_cols=77 Identities=21% Similarity=0.239 Sum_probs=47.8
Q ss_pred CCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHH-HhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 54 NKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVE-ANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+. ..+ .++.++.+|+.+...- .. ..
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLER 77 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHh
Confidence 456776776544 4444 355666 899999988 6666655554 444 4488888998765311 11 01
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+...
T Consensus 78 ~g~id~li~~Ag~ 90 (235)
T 3l77_A 78 FGDVDVVVANAGL 90 (235)
T ss_dssp HSSCSEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2479999976544
No 360
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.07 E-value=0.13 Score=41.92 Aligned_cols=92 Identities=11% Similarity=0.027 Sum_probs=54.7
Q ss_pred CCCeEEEECCC-CCHHHHHHHH-h--CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC-CC-ccccccCCCC
Q 046623 53 QNKSVLELGAG-AGLPGLTAAR-L--GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS-DD-LSQLSELGEF 125 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~~~~~l~~-~--~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~~~~~~ 125 (218)
++.+||-+|+| .|..++.+++ . |+ +|++++.++ ..+.+++ .|.. .++ |..+ .. .........+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE----LGAD---YVS--EMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH----HTCS---EEE--CHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH----hCCC---EEe--ccccchHHHHHhhcCCCc
Confidence 78899999985 2455555554 4 65 899999988 7776654 3422 222 1111 00 1111122379
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+|+-.-. ....++.+.++++++|+++.+
T Consensus 240 D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVG------TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCC------ChHHHHHHHHHhhcCCEEEEe
Confidence 99985221 134677888999999955444
No 361
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.02 E-value=6.9 Score=30.82 Aligned_cols=79 Identities=19% Similarity=0.169 Sum_probs=50.6
Q ss_pred CCCCeEEEECCCC--CH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAGA--GL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~--G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=-|+++ |. ++..+++.|. +|+.++.++ ..+.+.+.....+ .+.++.+|+.+...- ..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHH
Confidence 5678899888763 32 3444566776 899999887 5555555544443 378888888765311 11
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 105 ~~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 105 KKWGKLDFLVHAIGF 119 (293)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCcc
Confidence 122589999976543
No 362
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.93 E-value=2.6 Score=34.50 Aligned_cols=95 Identities=21% Similarity=0.268 Sum_probs=56.6
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC--CCcc-ccc--cC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS--DDLS-QLS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~-~~~--~~ 122 (218)
..++++||-+|+| .|..++.+++ .|+.+|+++|.++ .++.+++ .|.. .++ |..+ .... ... ..
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFV--NPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEE--eccccchhHHHHHHHHhC
Confidence 3578899999975 3555555564 4555899999988 7777653 3432 222 2221 1111 110 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCC-CceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG-RHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g-G~~~i~ 160 (218)
+.+|+|+-.-. ....+..+.++|+++ |+++++
T Consensus 261 ~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLECVG------NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCC------CHHHHHHHHHHhhcCCcEEEEE
Confidence 47999984221 135678888999999 955444
No 363
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=87.39 E-value=1 Score=36.34 Aligned_cols=93 Identities=15% Similarity=0.045 Sum_probs=54.6
Q ss_pred CCCCCeEEEECCC--CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC-CCccc-cc--cC
Q 046623 51 DFQNKSVLELGAG--AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS-DDLSQ-LS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G--~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~-~~--~~ 122 (218)
..++++||-.|++ .|.....++ ..|+ +|+++|.++ ..+.++ ..+.. .+ .|..+ ..... .. ..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~----~~g~~---~~--~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLK----QIGFD---AA--FNYKTVNSLEEALKKASP 212 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH----HTTCS---EE--EETTSCSCHHHHHHHHCT
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH----hcCCc---EE--EecCCHHHHHHHHHHHhC
Confidence 3578899999973 444444444 4565 899999887 666652 22321 11 24433 22111 10 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.+|+++-+.. ...+..+.++|+++|+++++
T Consensus 213 ~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEESSC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEE
Confidence 47999886432 23467778899999955544
No 364
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=87.39 E-value=0.64 Score=37.80 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=57.6
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc---ccCCC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL---SELGE 124 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~ 124 (218)
..++.+||=.|+| .|..++.+++ .+..+|+++|.++ ..+.+++ .|.. .++. ..+...+.. .....
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~--~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVK--SGAGAADAIRELTGGQG 239 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEE--CSTTHHHHHHHHHGGGC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEc--CCCcHHHHHHHHhCCCC
Confidence 3578899999986 3556666664 4566999999998 7776653 3432 2222 122111111 01237
Q ss_pred CcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 125 FDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 125 ~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+|+- +.. ....++.+.++|+++|+++++
T Consensus 240 ~d~v~d--~~G----~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 240 ATAVFD--FVG----AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEEE--SSC----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CeEEEE--CCC----CHHHHHHHHHHHhcCCEEEEE
Confidence 999884 211 134778888999999955544
No 365
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.32 E-value=3.3 Score=33.87 Aligned_cols=95 Identities=18% Similarity=0.184 Sum_probs=56.2
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCC--CCcc-ccc--cC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGS--DDLS-QLS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~-~~~--~~ 122 (218)
..++.+||-+|+| .|..++.+++ .|+.+|+++|.++ ..+.+++ .|.. .++ |..+ .... ... ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECV--NPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEe--cccccchhHHHHHHHHhC
Confidence 3578899999975 2555555554 4555899999988 7777643 3432 222 2221 1111 110 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCC-CceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG-RHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g-G~~~i~ 160 (218)
+.+|+|+-.-. ....+..+.++++++ |+++++
T Consensus 260 ~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFEVIG------RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEECSC------CHHHHHHHHHHBCTTTCEEEEC
T ss_pred CCCcEEEECCC------CHHHHHHHHHHhhcCCcEEEEe
Confidence 37999984211 135677888899999 955444
No 366
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.30 E-value=2.6 Score=32.52 Aligned_cols=80 Identities=21% Similarity=0.280 Sum_probs=53.1
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...- .. ..
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 567788877766553 3334466776 899999998 7777777766655 4588888998765321 11 11
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 87 ~g~id~lv~nAg~ 99 (256)
T 3gaf_A 87 FGKITVLVNNAGG 99 (256)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2579999976543
No 367
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.22 E-value=4.3 Score=33.32 Aligned_cols=118 Identities=11% Similarity=0.063 Sum_probs=66.2
Q ss_pred CCeEEEECCCC-C-HHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 54 NKSVLELGAGA-G-LPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 54 ~~~vLDlG~G~-G-~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
..+|.=||+|. | .++..+++.|. +|++.|.++ ..+.+.+ .++. . .....+........|+|++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~----~g~~----~-----~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALER----EGIA----G-----ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT----TTCB----C-----CSSHHHHHHHSCSSCEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHH----CCCE----E-----eCCHHHHHhcCCCCCEEEE
Confidence 45788888873 2 23344456665 899999998 6665432 2221 1 1111111112234699997
Q ss_pred cccccCCcchHHHHHHHHHHhcCCCceEEEEEeecc-CChHHHHHHHHHhCCcEEEEEEccC
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVR-TRTGDCLHELIMSQGFRVIELTCQL 191 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~-~~~~~~~~~~~~~~gf~~~~~~~~~ 191 (218)
.-+.. ...++++.+...++++. +++...... ....+....+ .+.|......|+..
T Consensus 88 ~vp~~---~v~~vl~~l~~~l~~g~--iiId~st~~~~~~~~~~~~l-~~~g~~~vdapVsG 143 (358)
T 4e21_A 88 MVPAA---VVDSMLQRMTPLLAAND--IVIDGGNSHYQDDIRRADQM-RAQGITYVDVGTSG 143 (358)
T ss_dssp CSCGG---GHHHHHHHHGGGCCTTC--EEEECSSCCHHHHHHHHHHH-HTTTCEEEEEEEEC
T ss_pred eCCHH---HHHHHHHHHHhhCCCCC--EEEeCCCCChHHHHHHHHHH-HHCCCEEEeCCCCC
Confidence 54422 56777777777788776 333332222 2233444444 78888888777643
No 368
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=87.16 E-value=5.7 Score=30.81 Aligned_cols=80 Identities=25% Similarity=0.344 Sum_probs=50.2
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCc------------c-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVK------------P-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~------------~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
..++++|=-|++.|. ++..+++.|. +|+.+|.+ + .++...+.+...+ .++.++.+|+.+..
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRE 87 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHH
Confidence 567788888866552 3334456676 89999876 4 5555555555554 45889999987653
Q ss_pred cc-cc-----ccCCCCcEEEEcccc
Q 046623 116 LS-QL-----SELGEFDMVIMSDVF 134 (218)
Q Consensus 116 ~~-~~-----~~~~~~D~Iv~~~~~ 134 (218)
.- .. ...++.|+++.+.-.
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 11 11 112589999976544
No 369
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.89 E-value=0.86 Score=36.96 Aligned_cols=93 Identities=17% Similarity=0.013 Sum_probs=54.4
Q ss_pred CCCCCeEEEECCCC--CHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c---ccC
Q 046623 51 DFQNKSVLELGAGA--GLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L---SEL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G~--G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~---~~~ 122 (218)
..++.+||-.|+|+ |..+..++ ..|+ +|++++.++ ..+.+++ .+.. .++ |..+....+ . ...
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lga~---~~~--~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR----LGAA---YVI--DTSTAPLYETVMELTNG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH----HTCS---EEE--ETTTSCHHHHHHHHTTT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----CCCc---EEE--eCCcccHHHHHHHHhCC
Confidence 36788999999874 45555555 4566 999999998 8777764 2322 222 222222111 1 122
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+++-+-. ........++|+++|+++.+
T Consensus 212 ~g~Dvvid~~g-------~~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAIDSIG-------GPDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEESSC-------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCC-------ChhHHHHHHHhcCCCEEEEE
Confidence 47999885221 12223344799999955544
No 370
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=86.80 E-value=4.6 Score=31.85 Aligned_cols=80 Identities=18% Similarity=0.279 Sum_probs=49.0
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc---hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP---LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~---~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.+. ..+.+.+..+..+ .++.++.+|+.+...- ..
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 467788888876553 2333456666 899888763 4455555555554 4588888888764311 11
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 124 ~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 124 EALGGLDILALVAGK 138 (294)
T ss_dssp HHHTCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112589999976543
No 371
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.66 E-value=5.8 Score=30.52 Aligned_cols=81 Identities=11% Similarity=0.119 Sum_probs=51.9
Q ss_pred CCCCeEEEECCC--CCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAG--AGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G--~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=.|++ .|. ++..+++.|. +|+.++.++ ..+.+.+.....+- .++.++.+|+.+...- ..
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHH
Confidence 567788888876 443 3444566776 899998887 66666655554432 2588999998766421 11
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...+.+|+++.+...
T Consensus 83 ~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 83 EQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCeeEEEEcccc
Confidence 112579999976543
No 372
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=86.44 E-value=6.4 Score=33.26 Aligned_cols=40 Identities=25% Similarity=0.408 Sum_probs=26.2
Q ss_pred CCCeEEEECCC-CCH-HHHHHHHhCCCeEEEecCcc-hHHHHHH
Q 046623 53 QNKSVLELGAG-AGL-PGLTAARLGATRVVLTDVKP-LLPGLIN 93 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~-~~~~l~~~~~~~v~~~D~~~-~~~~a~~ 93 (218)
.+.+.-=+|.| .|. .+..+++.|. +|+++|+++ .++.+.+
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~-~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGV-DVLGVDINQQTIDKLQN 52 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHC
Confidence 45566667777 443 3334567776 899999999 7776654
No 373
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.35 E-value=3.3 Score=32.40 Aligned_cols=80 Identities=19% Similarity=0.298 Sum_probs=52.4
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-----cccC
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-----LSEL 122 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~ 122 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...-. ....
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 567788877765542 2333456676 899999998 7777766666655 45888999987654211 1112
Q ss_pred CCCcEEEEcccc
Q 046623 123 GEFDMVIMSDVF 134 (218)
Q Consensus 123 ~~~D~Iv~~~~~ 134 (218)
++.|+++.+.-.
T Consensus 108 g~iD~lvnnAg~ 119 (275)
T 4imr_A 108 APVDILVINASA 119 (275)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 589999976543
No 374
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.33 E-value=1.3 Score=35.97 Aligned_cols=93 Identities=19% Similarity=0.129 Sum_probs=55.1
Q ss_pred CCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc---cCCCC
Q 046623 53 QNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS---ELGEF 125 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~---~~~~~ 125 (218)
++.+||-+|+| .|...+.+++ .|+.+|++++.++ ..+.+++ .+.. .++ |..+.... ... ....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~---~~~--~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGAD---YVI--NPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCS---EEE--CTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEE--CCCCcCHHHHHHHHcCCCCC
Confidence 78899999985 3445555554 4554899999988 7666653 3322 222 22222211 111 12369
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+|+-.-. ....++.+.++++++|+++.+
T Consensus 238 D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 238 DVFLEFSG------APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEEECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCC------CHHHHHHHHHHHhcCCEEEEE
Confidence 99985322 135677788899999955444
No 375
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.30 E-value=4.1 Score=32.21 Aligned_cols=80 Identities=20% Similarity=0.278 Sum_probs=49.3
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCC-CCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGL-GGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+.+.+.+...+. ..++.++.+|+.+...- ..
T Consensus 24 l~~k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSS-NGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 456677766654 4444444 55566 899999988 77666666554432 01578888888765311 11
Q ss_pred ccCCCCcEEEEccc
Q 046623 120 SELGEFDMVIMSDV 133 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~ 133 (218)
...+++|+++.+.-
T Consensus 102 ~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 102 AKFGKIDILVNNAG 115 (297)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 01247999997654
No 376
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=86.14 E-value=5.8 Score=30.95 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=47.0
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc--hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP--LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...- ..
T Consensus 27 ~~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 27 LEGKVALVTGAG-RGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 456677766655 4444444 45565 899988876 3454445555444 3478888888764311 10
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...+..|+++.+.-.
T Consensus 103 ~~~g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGV 117 (283)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 112578999976543
No 377
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.73 E-value=3.6 Score=33.15 Aligned_cols=96 Identities=22% Similarity=0.209 Sum_probs=56.6
Q ss_pred CCCCCCeEEEECCC-CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc----cccC
Q 046623 50 FDFQNKSVLELGAG-AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ----LSEL 122 (218)
Q Consensus 50 ~~~~~~~vLDlG~G-~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 122 (218)
...++.+||=.|+| .|..++.++ ..|+..++++|.++ .++.+++ .|.. .++ |..+....+ ....
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~---~~i--~~~~~~~~~~~~~~~~~ 227 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM---QTF--NSSEMSAPQMQSVLREL 227 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEE--ETTTSCHHHHHHHHGGG
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe---EEE--eCCCCCHHHHHHhhccc
Confidence 34678899999986 344555555 45666788999988 7766653 3432 222 222222111 1123
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+|+-. . -....++...++++++|.++++
T Consensus 228 ~g~d~v~d~--~----G~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 228 RFNQLILET--A----GVPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp CSSEEEEEC--S----CSHHHHHHHHHHCCTTCEEEEC
T ss_pred CCccccccc--c----cccchhhhhhheecCCeEEEEE
Confidence 567877742 1 1245677888899999955444
No 378
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.68 E-value=1 Score=36.11 Aligned_cols=88 Identities=15% Similarity=0.019 Sum_probs=52.2
Q ss_pred eEEEECC-C-CCHHHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 56 SVLELGA-G-AGLPGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 56 ~vLDlG~-G-~G~~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
+||=.|+ | .|..++.+++. |+ +|++++.++ ..+.+++ .|.. .++. ..+.........+.+|+++-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi~--~~~~~~~~~~~~~~~d~v~d- 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKS----LGAN---RILS--RDEFAESRPLEKQLWAGAID- 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHH----HTCS---EEEE--GGGSSCCCSSCCCCEEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCC---EEEe--cCCHHHHHhhcCCCccEEEE-
Confidence 4888886 2 56666666654 55 999999988 8777754 3432 2221 11111000012357898774
Q ss_pred ccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 132 DVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 132 ~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+.. .+.++.+.++|+++|+++.+
T Consensus 218 -~~g-----~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 -TVG-----DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp -SSC-----HHHHHHHHHTEEEEEEEEEC
T ss_pred -CCC-----cHHHHHHHHHHhcCCEEEEE
Confidence 221 23788888999999955544
No 379
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=85.59 E-value=1.1 Score=37.93 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=33.3
Q ss_pred CCeEEEECCCCCHHHHHHH----HhC--CCeEEEecCcc-hHHHHHHHHHH
Q 046623 54 NKSVLELGAGAGLPGLTAA----RLG--ATRVVLTDVKP-LLPGLINNVEA 97 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l~----~~~--~~~v~~~D~~~-~~~~a~~~~~~ 97 (218)
..+|+|+|+|.|.++..+. +.+ ..+++.+|+|+ ..+..++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4699999999999877663 222 24899999999 77777776654
No 380
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.57 E-value=3.2 Score=31.87 Aligned_cols=82 Identities=18% Similarity=0.131 Sum_probs=52.7
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC-CceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG-GRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
..++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+....-. ..+.++.+|+.+...- .. .
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 456788888776653 3344466777 899999998 777776666554221 3478888898765311 10 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 84 ~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 84 KYGAVDILVNAAAM 97 (250)
T ss_dssp HHCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 12579999976544
No 381
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.51 E-value=1.5 Score=35.51 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=56.0
Q ss_pred CCCCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc-cCCCC
Q 046623 51 DFQNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS-ELGEF 125 (218)
Q Consensus 51 ~~~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~-~~~~~ 125 (218)
..++.+||-.|+| .|.....+++ .|+ +|++++.++ ..+.+++ .+.. .+ .|..+.... ... ..+.+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~--~d~~~~~~~~~~~~~~~~~ 231 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD---LV--VNPLKEDAAKFMKEKVGGV 231 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS---EE--ECTTTSCHHHHHHHHHSSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC---EE--ecCCCccHHHHHHHHhCCC
Confidence 3568899999985 3555555554 455 999999988 7766643 3422 12 233322211 110 01478
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+|+-.-. ....++.+.++|+++|+++.+
T Consensus 232 d~vid~~g------~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 232 HAAVVTAV------SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEEESSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCC------CHHHHHHHHHHhhcCCEEEEe
Confidence 99885322 135677888899999955444
No 382
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=85.37 E-value=6.4 Score=33.40 Aligned_cols=132 Identities=22% Similarity=0.297 Sum_probs=67.9
Q ss_pred CCCeEEEECCC-CCH-HHHHHHHhCCCeEEEecCcc-hHHHHHHHH------------HHhCCCCceEEEEeecCCCCcc
Q 046623 53 QNKSVLELGAG-AGL-PGLTAARLGATRVVLTDVKP-LLPGLINNV------------EANGLGGRVEVRELVWGSDDLS 117 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~-~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~------------~~~~~~~~~~~~~~d~~~~~~~ 117 (218)
...+|-=+|+| .|. ++..+++.|. +|+++|+++ .++.+.+.. +.+-...++.+- .. ..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~-~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-----td-~~ 79 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGH-EVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-----TD-LA 79 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-----SC-HH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-----CC-HH
Confidence 34578888887 343 2334466666 899999999 777654420 000000112221 01 00
Q ss_pred ccccCCCCcEEEEc--ccc---cCCc---chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhC----CcEEE
Q 046623 118 QLSELGEFDMVIMS--DVF---YDPE---EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQ----GFRVI 185 (218)
Q Consensus 118 ~~~~~~~~D~Iv~~--~~~---~~~~---~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~----gf~~~ 185 (218)
+ .-...|+|+.. .+. .... ...+.++.+.+.++++. +++..++ ......+.+...+.+. .|.+.
T Consensus 80 e--a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~-iVV~~ST-v~pgtt~~l~~~l~e~~~~~d~~v~ 155 (446)
T 4a7p_A 80 E--GVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPS-VIVTKST-VPVGTGDEVERIIAEVAPNSGAKVV 155 (446)
T ss_dssp H--HHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCC-EEEECSC-CCTTHHHHHHHHHHHHSTTSCCEEE
T ss_pred H--HHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCC-EEEEeCC-CCchHHHHHHHHHHHhCCCCCceEE
Confidence 0 12457988874 222 1112 25666677777788765 3444333 3334444444443443 36665
Q ss_pred EEEccCCCCC
Q 046623 186 ELTCQLGGGC 195 (218)
Q Consensus 186 ~~~~~~~~~~ 195 (218)
.-|.....|.
T Consensus 156 ~~Pe~a~eG~ 165 (446)
T 4a7p_A 156 SNPEFLREGA 165 (446)
T ss_dssp ECCCCCCTTS
T ss_pred eCcccccccc
Confidence 5576666554
No 383
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.15 E-value=6 Score=30.72 Aligned_cols=80 Identities=21% Similarity=0.246 Sum_probs=48.6
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEec-Ccc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTD-VKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D-~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++ .++ ..+.+.+.+...+ .++.++.+|+.+...- .. .
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356788888776653 3344567777 777764 444 6666666665555 4488888898765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 102 ~~g~iD~lvnnAG~ 115 (267)
T 3u5t_A 102 AFGGVDVLVNNAGI 115 (267)
T ss_dssp HHSCEEEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 12579999976543
No 384
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.01 E-value=1.2 Score=36.13 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=55.2
Q ss_pred CCCCCeEEEECC--CCCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC-Ccc-ccc--cC
Q 046623 51 DFQNKSVLELGA--GAGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD-DLS-QLS--EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~--G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~-~~~--~~ 122 (218)
..++++||-.|+ |.|.....+++ .|+ +|++++.++ ..+.+++. .+.. .+ .|..+. ... ... ..
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~---~g~~---~~--~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTK---FGFD---DA--FNYKEESDLTAALKRCFP 223 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---SCCS---EE--EETTSCSCSHHHHHHHCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cCCc---eE--EecCCHHHHHHHHHHHhC
Confidence 357889999997 24555555554 565 899999887 66665422 2321 12 233321 111 110 12
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+++-+-. ...+..+.++++++|+++++
T Consensus 224 ~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESSC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEE
Confidence 46899886322 24677788899999955444
No 385
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=84.97 E-value=2.5 Score=33.55 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=64.0
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
..+++++|=+|+| |. ....+++.|+.+++.++.++ ..+.+.+.+...... +.+...++.+... ....+|
T Consensus 124 ~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~--~~i~~~~~~~l~~----~l~~~D 196 (283)
T 3jyo_A 124 NAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR--EAVVGVDARGIED----VIAAAD 196 (283)
T ss_dssp TCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS--CCEEEECSTTHHH----HHHHSS
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC--ceEEEcCHHHHHH----HHhcCC
Confidence 4678899999986 32 22234566777899999987 666555555433211 2333333222110 123589
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEE
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRV 184 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~ 184 (218)
+|+..-+....+.....+ -..+++++. ++....+.+....+++.. ++.|...
T Consensus 197 iVInaTp~Gm~~~~~~pi--~~~~l~~~~---~v~DlvY~P~~T~ll~~A-~~~G~~~ 248 (283)
T 3jyo_A 197 GVVNATPMGMPAHPGTAF--DVSCLTKDH---WVGDVVYMPIETELLKAA-RALGCET 248 (283)
T ss_dssp EEEECSSTTSTTSCSCSS--CGGGCCTTC---EEEECCCSSSSCHHHHHH-HHHTCCE
T ss_pred EEEECCCCCCCCCCCCCC--CHHHhCCCC---EEEEecCCCCCCHHHHHH-HHCcCeE
Confidence 999755543211110001 123566665 233333344455677777 7777654
No 386
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.95 E-value=4.4 Score=31.38 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=51.2
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-cc-cccCCC
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQ-LSELGE 124 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~-~~~~~~ 124 (218)
.+++++|=-|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+...+....+.++.+|+.+... .. ....++
T Consensus 8 l~~k~~lVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 8 LKGKTALVTGSTAG-IGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence 45677887776544 4443 456666 899999998 777766666555433457778888765431 11 123357
Q ss_pred CcEEEEcccc
Q 046623 125 FDMVIMSDVF 134 (218)
Q Consensus 125 ~D~Iv~~~~~ 134 (218)
.|+++.+.-.
T Consensus 86 id~lv~nAg~ 95 (267)
T 3t4x_A 86 VDILINNLGI 95 (267)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999976543
No 387
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=84.69 E-value=1.2 Score=35.87 Aligned_cols=93 Identities=15% Similarity=-0.025 Sum_probs=54.7
Q ss_pred CCCCCeEEEECCC--CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc---ccC
Q 046623 51 DFQNKSVLELGAG--AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL---SEL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G--~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~---~~~ 122 (218)
..++++||=.|+. .|.....+++ .|+ +|++++.++ ..+.+++ .+.. .++ |..+.... .. ...
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~--~~~~~~~~~~~~~~~~~ 215 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGAE---YLI--NASKEDILRQVLKFTNG 215 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEE--ETTTSCHHHHHHHHTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEE--eCCCchHHHHHHHHhCC
Confidence 3578899999842 4555555554 455 999999987 7666543 3322 222 22222211 11 013
Q ss_pred CCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+++-+-. ...++.+.++|+++|+++.+
T Consensus 216 ~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 216 KGVDASFDSVG-------KDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp SCEEEEEECCG-------GGGHHHHHHHEEEEEEEEEC
T ss_pred CCceEEEECCC-------hHHHHHHHHHhccCCEEEEE
Confidence 46999885322 14567788899999955544
No 388
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=84.66 E-value=1 Score=36.53 Aligned_cols=93 Identities=18% Similarity=0.107 Sum_probs=54.7
Q ss_pred CCCCCeEEEECCC--CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc---ccCC
Q 046623 51 DFQNKSVLELGAG--AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL---SELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G--~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~ 123 (218)
..++++||=.|++ .|..+..+++ .|+ +|++++.++ ..+.+++ .+.. .++. ......... ....
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~v~~--~~~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKS----VGAD---IVLP--LEEGWAKAVREATGGA 226 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----HTCS---EEEE--SSTTHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCc---EEec--CchhHHHHHHHHhCCC
Confidence 3578899999872 4556666654 455 999999988 7776654 2322 2222 221111111 1123
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-.-. . ..+..+.++++++|+++++
T Consensus 227 g~Dvvid~~g--~-----~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVDPIG--G-----PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEESCC---------CHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCc--h-----hHHHHHHHhhcCCCEEEEE
Confidence 6999985322 1 2466778899999955554
No 389
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=84.10 E-value=2.5 Score=34.53 Aligned_cols=93 Identities=17% Similarity=0.046 Sum_probs=56.2
Q ss_pred CCCCCeEEEECC--CCCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-cc--cCC
Q 046623 51 DFQNKSVLELGA--GAGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-LS--ELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~--G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~--~~~ 123 (218)
..++++||-.|+ |.|.....+++ .|+ +|++++.++ ..+.+++ .+.. .++ |..+....+ .. ...
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~--~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD---RPI--NYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEE--ETTTSCHHHHHHHHCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc---EEE--ecCChhHHHHHHHhcCC
Confidence 357889999993 36666666664 455 899999987 6666653 3422 222 322222111 10 124
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+|+-.-. ...++.+.++++++|+++.+
T Consensus 231 g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 231 GVDVVYESVG-------GAMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp CEEEEEECSC-------THHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCC-------HHHHHHHHHHHhcCCEEEEE
Confidence 6899885322 14677888999999954444
No 390
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=83.96 E-value=3.8 Score=31.89 Aligned_cols=79 Identities=22% Similarity=0.226 Sum_probs=50.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ .++.+.+.+...+ ..+.++.+|+.+...- .. .
T Consensus 19 l~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 19 LKGTTALVTGGSKG-IGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 46778888876544 4443 355666 899999988 7766655555544 3478888888765311 11 0
Q ss_pred cC-CCCcEEEEcccc
Q 046623 121 EL-GEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~-~~~D~Iv~~~~~ 134 (218)
.. +..|+++.+.-.
T Consensus 95 ~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 95 VFDGKLNILVNNAGV 109 (273)
T ss_dssp HTTSCCCEEEECCCC
T ss_pred HcCCCCcEEEECCCC
Confidence 11 689999976543
No 391
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=83.70 E-value=0.93 Score=36.50 Aligned_cols=92 Identities=17% Similarity=0.077 Sum_probs=54.2
Q ss_pred CCCCeEEEECC-C-CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c---ccCC
Q 046623 52 FQNKSVLELGA-G-AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L---SELG 123 (218)
Q Consensus 52 ~~~~~vLDlG~-G-~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~---~~~~ 123 (218)
.++++||=.|+ | .|.....++ ..|+ +|++++.++ ..+.+++ .+.. .++ |..+....+ . ....
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~--~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKA----LGAW---ETI--DYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH----HTCS---EEE--ETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC---EEE--eCCCccHHHHHHHHhCCC
Confidence 56889998883 3 455555555 4566 999999888 7776653 3322 222 222222111 1 1124
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-+-. ...+..+.++++++|+++++
T Consensus 209 g~Dvvid~~g-------~~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 209 KCPVVYDGVG-------QDTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CEEEEEESSC-------GGGHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECCC-------hHHHHHHHHHhcCCCEEEEE
Confidence 7999885322 14566778899999955444
No 392
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.68 E-value=4.2 Score=31.22 Aligned_cols=80 Identities=24% Similarity=0.258 Sum_probs=53.4
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc----ccC
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----SEL 122 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----~~~ 122 (218)
.+++++|=.|++.|. ++..+++.|. +|+.++.++ .++.+.+.+...+ .++.++.+|+.+...- .. ...
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 456788888776653 3334456676 899999998 7777777776655 4588899998765311 11 011
Q ss_pred CCCcEEEEcccc
Q 046623 123 GEFDMVIMSDVF 134 (218)
Q Consensus 123 ~~~D~Iv~~~~~ 134 (218)
++.|+++.+.-.
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 578999976544
No 393
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=83.68 E-value=3.7 Score=31.60 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=49.1
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-cccc-----
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQLS----- 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~----- 120 (218)
.+++++|=-|++ |.++.. +++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+... ....
T Consensus 7 l~~k~vlVTGas-~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 7 LEGCTALVTGGS-RGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CTTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 456788877765 444444 355665 899999888 6666555554443 357888888876531 1110
Q ss_pred cC-CCCcEEEEccc
Q 046623 121 EL-GEFDMVIMSDV 133 (218)
Q Consensus 121 ~~-~~~D~Iv~~~~ 133 (218)
.. +..|+++.+.-
T Consensus 83 ~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 83 HFHGKLNILVNNAG 96 (260)
T ss_dssp HTTTCCCEEEECCC
T ss_pred HcCCCCCEEEECCC
Confidence 11 67999997654
No 394
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=83.47 E-value=13 Score=28.49 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=52.2
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+....-..++.++.+|+.+...- .. ..
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 567788888876653 3334456676 899999998 7777666665422123478888888765311 11 11
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2579999976544
No 395
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=83.28 E-value=3.6 Score=33.21 Aligned_cols=95 Identities=12% Similarity=-0.064 Sum_probs=53.8
Q ss_pred CCCCCeEEEECCCCC-HHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-c--cCC
Q 046623 51 DFQNKSVLELGAGAG-LPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-S--ELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G-~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-~--~~~ 123 (218)
..++.+||=+|+|.+ ..+..++ ..++.+|+++|.++ ..+.+++ .+.. .++ |..+... +.. . ...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~---~~i--~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGAD---VTI--NSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCS---EEE--EC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCe---EEE--eCCCCCHHHHhhhhcCCC
Confidence 467889999999754 3444444 45667999999988 6665543 3332 222 2222211 111 1 123
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|.++... .....+....++++++|+++++
T Consensus 232 g~d~~~~~~------~~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 232 GVQSAIVCA------VARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CEEEEEECC------SCHHHHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEec------cCcchhheeheeecCCceEEEE
Confidence 456665421 1245677788899999955544
No 396
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=83.20 E-value=1.6 Score=35.60 Aligned_cols=92 Identities=20% Similarity=0.120 Sum_probs=53.7
Q ss_pred CCCCeEEEECCC--CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc---ccCC
Q 046623 52 FQNKSVLELGAG--AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL---SELG 123 (218)
Q Consensus 52 ~~~~~vLDlG~G--~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~---~~~~ 123 (218)
.++++||-.|++ .|.....++ ..|+ +|++++.++ ..+.++ ..+.. .+ .|..+.... .. ....
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~----~~ga~---~~--~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVL----QNGAH---EV--FNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH----HTTCS---EE--EETTSTTHHHHHHHHHCTT
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH----HcCCC---EE--EeCCCchHHHHHHHHcCCC
Confidence 568899999973 444455554 4455 899999887 666543 23322 12 233332211 11 1123
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-+.. ...+....++++++|+++.+
T Consensus 239 ~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 239 GIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CEEEEEESCH-------HHHHHHHHHHEEEEEEEEEC
T ss_pred CcEEEEECCC-------hHHHHHHHHhccCCCEEEEE
Confidence 6999986322 23567778899999955544
No 397
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.18 E-value=7.3 Score=30.04 Aligned_cols=78 Identities=26% Similarity=0.291 Sum_probs=54.4
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ .++.+.+.+...+ .++.++.+|+.+...- .. ..
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567889988887763 3444566676 899999998 7777777776655 4588899998765421 11 12
Q ss_pred CCCCcEEEEcc
Q 046623 122 LGEFDMVIMSD 132 (218)
Q Consensus 122 ~~~~D~Iv~~~ 132 (218)
.++.|+++.+.
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 35899999765
No 398
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.12 E-value=1.2 Score=35.89 Aligned_cols=94 Identities=19% Similarity=0.119 Sum_probs=55.5
Q ss_pred CCCCCeEEEECCC--CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c--ccCC
Q 046623 51 DFQNKSVLELGAG--AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L--SELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G--~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~--~~~~ 123 (218)
..++++||-.|++ .|.....+++ .|+ +|++++.++ ..+.+.+ ..+.. .+ .|..+..... . ...+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~---~~g~~---~~--~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVE---ELGFD---GA--IDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TTCCS---EE--EETTTSCHHHHHHHHCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCCC---EE--EECCCHHHHHHHHHhcCC
Confidence 3578899999983 4555555554 455 999999887 6666522 22321 12 2333322111 1 0124
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-+-. ...+..+.++++++|+++++
T Consensus 218 ~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 218 GIDVFFDNVG-------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp CEEEEEESSC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECCC-------cchHHHHHHHHhhCCEEEEE
Confidence 6998885322 24677888899999955444
No 399
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=82.79 E-value=4.8 Score=30.71 Aligned_cols=78 Identities=28% Similarity=0.330 Sum_probs=49.8
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ .++.+.+.+...+ .++.++.+|+.+...- .. .
T Consensus 5 l~~k~~lVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 5 LQGKVALITGASSG-IGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TTTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45678887876554 4443 455666 899999988 7766666655544 3478888888765311 11 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+..|+++.+.-
T Consensus 81 ~~g~id~lv~nAg 93 (247)
T 2jah_A 81 ALGGLDILVNNAG 93 (247)
T ss_dssp HHSCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1257999997654
No 400
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.78 E-value=11 Score=29.69 Aligned_cols=80 Identities=29% Similarity=0.396 Sum_probs=50.6
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCc------------c-hHHHHHHHHHHhCCCCceEEEEeecCCCC
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVK------------P-LLPGLINNVEANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~------------~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 115 (218)
.+++++|=-|++.|. ++..+++.|. +|+.+|.+ + .++.+.+.++..+ .++.++.+|+.+..
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFD 102 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHH
Confidence 567788888877663 3334466676 89998876 4 4555555555544 45888999987653
Q ss_pred cc-cc-----ccCCCCcEEEEcccc
Q 046623 116 LS-QL-----SELGEFDMVIMSDVF 134 (218)
Q Consensus 116 ~~-~~-----~~~~~~D~Iv~~~~~ 134 (218)
.- .. ...++.|+++.+.-.
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 11 11 122589999976543
No 401
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=82.67 E-value=6.7 Score=29.98 Aligned_cols=76 Identities=21% Similarity=0.265 Sum_probs=45.9
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+...+.+ + .++.++.+|+.+... ... .
T Consensus 4 l~~k~vlVTGas-~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 4 LQGKVALVTGGA-SGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAEL---G--ERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp TTTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---C--TTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---C--CceEEEEccCCCHHHHHHHHHHHHH
Confidence 456677766654 4444444 45565 899999887 665544433 2 347888888876531 111 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 77 ~~g~id~lv~~Ag~ 90 (253)
T 1hxh_A 77 RLGTLNVLVNNAGI 90 (253)
T ss_dssp HHCSCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 12578999976543
No 402
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=82.54 E-value=9.8 Score=29.59 Aligned_cols=77 Identities=25% Similarity=0.316 Sum_probs=47.8
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|+ +|.++..+ ++.|. +|++++.++ .++.+.+.+...+. ..+.++.+|+.+... ... .
T Consensus 26 ~~~k~vlITGa-sggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 26 LQGKKVIVTGA-SKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp GTTCEEEESSC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHH
Confidence 34667886665 45555544 45565 899999988 77666555544432 247888888876431 111 0
Q ss_pred cCCCCcEEEEc
Q 046623 121 ELGEFDMVIMS 131 (218)
Q Consensus 121 ~~~~~D~Iv~~ 131 (218)
..+.+|+++.+
T Consensus 103 ~~g~iD~li~n 113 (286)
T 1xu9_A 103 LMGGLDMLILN 113 (286)
T ss_dssp HHTSCSEEEEC
T ss_pred HcCCCCEEEEC
Confidence 12479999976
No 403
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=82.49 E-value=7.3 Score=30.42 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=50.7
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecC-cc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDV-KP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~-~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~-----~ 120 (218)
..++++|=-|++.|. ++..+++.|. +|+.++. ++ ..+...+.+...+ .++.++.+|+.+...-. . .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 567788888776553 3334456666 8999886 45 6666666665555 45889999987654211 1 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 104 ~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 104 EFGRIDCLVNNAGI 117 (280)
T ss_dssp HHSCCCEEEEECC-
T ss_pred HcCCCCEEEECCCc
Confidence 12479999976543
No 404
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=82.22 E-value=0.38 Score=39.38 Aligned_cols=92 Identities=16% Similarity=0.092 Sum_probs=53.6
Q ss_pred CCCCeEEEECC-C-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c--ccCCC
Q 046623 52 FQNKSVLELGA-G-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L--SELGE 124 (218)
Q Consensus 52 ~~~~~vLDlG~-G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~--~~~~~ 124 (218)
.++++||=.|+ | .|.....+++ .|+ +|++++.++ ..+.+++ .+.. .++ |..+..... . .....
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~--~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACER----LGAK---RGI--NYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCS---EEE--ETTTSCHHHHHHHHHSSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCC---EEE--eCCchHHHHHHHHHhCCC
Confidence 56789998853 2 4555555554 455 899999988 7776654 3322 222 323222111 1 01347
Q ss_pred CcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 125 FDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 125 ~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+++-+-. ...+....++|+++|+++.+
T Consensus 236 ~Dvvid~~g-------~~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 236 VDIILDMIG-------AAYFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEEEESCC-------GGGHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCC-------HHHHHHHHHHhccCCEEEEE
Confidence 999885322 12567778899999955444
No 405
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=82.20 E-value=7.3 Score=30.09 Aligned_cols=80 Identities=23% Similarity=0.275 Sum_probs=51.1
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHH-hCCCCceEEEEeecCCCCccc-c-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEA-NGLGGRVEVRELVWGSDDLSQ-L-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~-~-----~ 120 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ .++.+.+.+.. .+ .++.++.+|+.+...-. . .
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 467778877765542 2333456666 899999988 77766665544 34 44889999988764211 1 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 95 ~~g~id~lv~nAg~ 108 (266)
T 4egf_A 95 AFGGLDVLVNNAGI 108 (266)
T ss_dssp HHTSCSEEEEECCC
T ss_pred HcCCCCEEEECCCc
Confidence 12579999976543
No 406
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=82.20 E-value=8.8 Score=31.73 Aligned_cols=106 Identities=16% Similarity=0.222 Sum_probs=65.4
Q ss_pred CCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 53 QNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.+.+||.++.+-|.++..++. ..+++.+.-+. .... ++.+++.. .. ...+ .. ....||+|++-
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~--~~~~~~~~~~~~~~~~----l~~~~~~~--~~-~~~~---~~----~~~~~d~v~~~ 108 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEG--RMAVERLETSRAAFRC----LTASGLQA--RL-ALPW---EA----AAGAYDLVVLA 108 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBT--TBEEEEEECBHHHHHH----HHHTTCCC--EE-CCGG---GS----CTTCEEEEEEE
T ss_pred hCCcEEEecCCCCccccccCC--CCceEEEeCcHHHHHH----HHHcCCCc--cc-cCCc---cC----CcCCCCEEEEE
Confidence 346999999999987766632 23677765444 3333 66677652 22 1111 11 45679999985
Q ss_pred ccccCC-cchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHH
Q 046623 132 DVFYDP-EEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHEL 176 (218)
Q Consensus 132 ~~~~~~-~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~ 176 (218)
-|=... +..+..+..+.+.|++|| .+++....+...+...+.+
T Consensus 109 ~Pk~k~~~~~~~~l~~~~~~l~~g~--~i~~~g~~~~g~~~~~~~~ 152 (381)
T 3dmg_A 109 LPAGRGTAYVQASLVAAARALRMGG--RLYLAGDKNKGFERYFKEA 152 (381)
T ss_dssp CCGGGCHHHHHHHHHHHHHHEEEEE--EEEEEEEGGGTHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHhCCCCC--EEEEEEccHHHHHHHHHHH
Confidence 442211 245778888889999999 5555555556666666665
No 407
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=82.15 E-value=2.5 Score=34.24 Aligned_cols=91 Identities=19% Similarity=0.166 Sum_probs=53.7
Q ss_pred CCCeEEEEC-CC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcccc--ccCCCCc
Q 046623 53 QNKSVLELG-AG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQL--SELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG-~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~D 126 (218)
++.+||=.| +| .|..+..+++ .|+ +|++++.++ ..+.+++ .+.. .++ |..+...... .....+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKK----MGAD---IVL--NHKESLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHH----HTCS---EEE--CTTSCHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCc---EEE--ECCccHHHHHHHhCCCCcc
Confidence 688999884 43 4555555554 455 999999988 7777654 3422 222 2222111111 1234699
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEE
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVV 159 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i 159 (218)
+|+-.- .....++.+.++|+++|+++.
T Consensus 220 vv~d~~------g~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 220 YVFCTF------NTDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EEEESS------CHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECC------CchHHHHHHHHHhccCCEEEE
Confidence 888521 124567788899999995543
No 408
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.08 E-value=6.9 Score=31.28 Aligned_cols=82 Identities=17% Similarity=0.263 Sum_probs=54.9
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~~ 121 (218)
..+++||=-|++.|. ++..+++.|. +|++++.++ ..+.+.+.+...+....+.++.+|+.+... ... ..
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 467788888877663 3334456676 899999998 887777777665543368889999876531 111 12
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.+..|+++.+.-.
T Consensus 85 ~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 FGPVSILCNNAGV 97 (319)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 2578999976543
No 409
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=81.47 E-value=13 Score=28.08 Aligned_cols=75 Identities=15% Similarity=0.011 Sum_probs=46.2
Q ss_pred CCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----ccCC
Q 046623 54 NKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SELG 123 (218)
Q Consensus 54 ~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~~~ 123 (218)
++++|=-|++.|. ++..+++.|. +|+.++.++ .++.+.+.+. ..+.++.+|+.+...- .. ...+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4567777766552 2333456666 899999988 7666555441 2388888888765311 10 1125
Q ss_pred CCcEEEEcccc
Q 046623 124 EFDMVIMSDVF 134 (218)
Q Consensus 124 ~~D~Iv~~~~~ 134 (218)
..|+++.+.-.
T Consensus 77 ~id~lvnnAg~ 87 (235)
T 3l6e_A 77 LPELVLHCAGT 87 (235)
T ss_dssp SCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 78999976543
No 410
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=81.38 E-value=6 Score=29.96 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=46.0
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|+ +|.++..+ ++.|. +|+.++.++ ..+...+.+... ..+.++.+|+.+... ... .
T Consensus 4 ~~~k~vlVtGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (251)
T 1zk4_A 4 LDGKVAIITGG-TLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHH
Confidence 45667776665 55555544 45565 899999887 665544443221 358888888876431 111 0
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+++|+++.+..
T Consensus 79 ~~~~id~li~~Ag 91 (251)
T 1zk4_A 79 AFGPVSTLVNNAG 91 (251)
T ss_dssp HHSSCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1246899997654
No 411
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.21 E-value=6.5 Score=29.92 Aligned_cols=80 Identities=24% Similarity=0.403 Sum_probs=52.6
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=.|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ ..+.++.+|+.+...- .. ..
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467788888866552 3333456666 899999998 7777777766654 4588888888765311 11 11
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.+..|+++.+.-.
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999976543
No 412
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.92 E-value=5.8 Score=30.54 Aligned_cols=79 Identities=24% Similarity=0.293 Sum_probs=52.2
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+.+.+.+...+ ..+.++.+|+.+...- .. .
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHH
Confidence 567788877765 4444443 55566 899999998 7777777776655 4588888888765321 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+...
T Consensus 103 ~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 103 AHGRCDVLVNNAGV 116 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 12579999976544
No 413
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=80.82 E-value=4.5 Score=31.30 Aligned_cols=80 Identities=21% Similarity=0.264 Sum_probs=47.3
Q ss_pred CCCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCc---c-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc--
Q 046623 51 DFQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVK---P-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-- 119 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~---~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-- 119 (218)
..+++++|=-|++.| ++..+ ++.|. +|+.++.+ . .++.+.+.+...+ .++.++.+|+.+...- ..
T Consensus 8 ~l~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CCTTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHH
T ss_pred CCCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHH
Confidence 356778887776655 44443 44555 78887654 3 4444444444444 4588888898765311 11
Q ss_pred ---ccCCCCcEEEEcccc
Q 046623 120 ---SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ---~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 84 ~~~~~~g~iD~lvnnAg~ 101 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGK 101 (262)
T ss_dssp HHHHHHCSEEEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 112579999976543
No 414
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.74 E-value=6 Score=30.78 Aligned_cols=81 Identities=25% Similarity=0.345 Sum_probs=51.4
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecC-------------cc-hHHHHHHHHHHhCCCCceEEEEeecCC
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDV-------------KP-LLPGLINNVEANGLGGRVEVRELVWGS 113 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~-------------~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~ 113 (218)
..+++++|=-|++.|. ++..+++.|. +|+.+|. ++ .++.+.+.+...+ .++.++.+|+.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD 88 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 3677888888877653 3334466676 8999987 44 5566555555554 458888888876
Q ss_pred CCcc-cc-----ccCCCCcEEEEcccc
Q 046623 114 DDLS-QL-----SELGEFDMVIMSDVF 134 (218)
Q Consensus 114 ~~~~-~~-----~~~~~~D~Iv~~~~~ 134 (218)
...- .. ...++.|+++.+.-.
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5311 11 112589999976544
No 415
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=80.71 E-value=5 Score=30.93 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=50.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+........+.++.+|+.+... ... .
T Consensus 5 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 5 VNGKVALVTGAAQG-IGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCc-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 35667887776544 4443 355665 899999887 665554444321111347788888876431 111 1
Q ss_pred cCCCCcEEEEcccccCCcchH
Q 046623 121 ELGEFDMVIMSDVFYDPEEMV 141 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~~~~~~~~ 141 (218)
..++.|+++.+.-....++..
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~ 103 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWE 103 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHH
T ss_pred HcCCCCEEEECCCCCChhhHH
Confidence 124789999876544334333
No 416
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=80.57 E-value=7.1 Score=30.41 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=52.8
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-c-----cc
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-Q-----LS 120 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~-----~~ 120 (218)
+++++++|=-|+++|. .+..+++.|+ +|+.++.++ ..+.+.. +...+ .++.++.+|+.+...- . ..
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~-~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDA-LAQRQ--PRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHH-HHHHC--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHH-HHhcC--CCEEEEEeecCCHHHHHHHHHHHHH
Confidence 3678899988888874 3445577777 899999887 6554443 33334 3478888898765311 1 12
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.|.-.
T Consensus 80 ~~G~iDiLVNnAGi 93 (258)
T 4gkb_A 80 TFGRLDGLVNNAGV 93 (258)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 33789999976543
No 417
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.40 E-value=3 Score=35.27 Aligned_cols=93 Identities=16% Similarity=0.063 Sum_probs=54.3
Q ss_pred CCCCeEEEECC-C-CCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc------------
Q 046623 52 FQNKSVLELGA-G-AGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL------------ 116 (218)
Q Consensus 52 ~~~~~vLDlG~-G-~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 116 (218)
.++.+||=+|+ | .|..++.+++....++++++.++ .++.+++ .|.. .++ |..+...
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~----lGa~---~vi--~~~~~d~~~~~~~~~~~~~ 297 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA----MGAE---AII--DRNAEGYRFWKDENTQDPK 297 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCC---EEE--ETTTTTCCSEEETTEECHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh----hCCc---EEE--ecCcCcccccccccccchH
Confidence 57889998887 3 55666666654334888888777 7666643 3432 122 2221110
Q ss_pred ------ccc---ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 117 ------SQL---SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 117 ------~~~---~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+ .....+|+|+-.-. ...+..+.++++++|+++++
T Consensus 298 ~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 298 EWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEE
Confidence 011 01247998884211 25677888899999955543
No 418
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=80.32 E-value=5.1 Score=31.39 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC-Cc-ccc-----
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD-DL-SQL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~-~~~----- 119 (218)
.+++++|=-|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+...+- .++.++.+|+.+. .. ...
T Consensus 10 ~~~k~vlITGas~G-IG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 10 TKRRCAVVTGGNKG-IGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp --CCEEEESSCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHH
Confidence 35667776666544 4444 355666 899999998 77666666655432 3588999998875 21 111
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 87 ~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 87 THFGKLDILVNNAGV 101 (311)
T ss_dssp HHHSSCCEEEECCCC
T ss_pred HhCCCCCEEEECCcc
Confidence 112589999987654
No 419
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=80.12 E-value=2.2 Score=34.72 Aligned_cols=92 Identities=12% Similarity=0.032 Sum_probs=52.5
Q ss_pred CCCCeEEEECCC--CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc---ccCC
Q 046623 52 FQNKSVLELGAG--AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL---SELG 123 (218)
Q Consensus 52 ~~~~~vLDlG~G--~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~---~~~~ 123 (218)
.++++||-.|++ .|.....++ ..|+ +|++++.++ ..+.+++ .+.. .+ .|..+.... .. ....
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~g~~---~~--~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEK----LGAA---AG--FNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HTCS---EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCc---EE--EecCChHHHHHHHHHhcCC
Confidence 567899998843 444444444 4455 899999888 7766632 2322 12 233332211 11 1124
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-+.. ...+....++|+++|+++.+
T Consensus 231 ~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILDCIG-------GSYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEESSC-------GGGHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCC-------chHHHHHHHhccCCCEEEEE
Confidence 6899885332 12466678899999954444
No 420
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.98 E-value=7.4 Score=30.34 Aligned_cols=81 Identities=23% Similarity=0.329 Sum_probs=53.8
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
..+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...- .. .
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3567888888876553 3334456676 899999988 7777777766655 3488888998765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 106 ~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 106 ELGGIDIAVCNAGI 119 (276)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 12479999976544
No 421
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=79.77 E-value=12 Score=30.09 Aligned_cols=124 Identities=14% Similarity=0.071 Sum_probs=63.8
Q ss_pred CCCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCc---c-hHHHHHHHHHHhCCCCceEEEEeecCCCC-cccccc
Q 046623 50 FDFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVK---P-LLPGLINNVEANGLGGRVEVRELVWGSDD-LSQLSE 121 (218)
Q Consensus 50 ~~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~---~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~ 121 (218)
...+++++|=+|+| |. ....+++.|+.+|+.++.+ . ..+.+.+.+.... . ..+...++.+.. ... .
T Consensus 150 ~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~--~~~~~~~~~~~~~l~~--~ 223 (315)
T 3tnl_A 150 HDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-D--CKAQLFDIEDHEQLRK--E 223 (315)
T ss_dssp CCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHH--H
T ss_pred CCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-C--CceEEeccchHHHHHh--h
Confidence 34678899999986 32 2333456777789999888 4 3333333332221 1 233333443311 100 1
Q ss_pred CCCCcEEEEcccccCCcc--hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 122 LGEFDMVIMSDVFYDPEE--MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 122 ~~~~D~Iv~~~~~~~~~~--~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
...+|+|+..-+....+. ...+. ....++++. ++....+.+....+++.. ++.|....
T Consensus 224 l~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~---~V~DlvY~P~~T~ll~~A-~~~G~~~~ 283 (315)
T 3tnl_A 224 IAESVIFTNATGVGMKPFEGETLLP--SADMLRPEL---IVSDVVYKPTKTRLLEIA-EEQGCQTL 283 (315)
T ss_dssp HHTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTC---EEEESCCSSSSCHHHHHH-HHTTCEEE
T ss_pred hcCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCC---EEEEeccCCCCCHHHHHH-HHCCCeEe
Confidence 246899997555432111 00110 123456655 333333445556777777 78887643
No 422
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.76 E-value=18 Score=28.85 Aligned_cols=85 Identities=20% Similarity=0.232 Sum_probs=51.0
Q ss_pred CeEEEECCCC-C-HHHHHHHHhCCC-eEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 55 KSVLELGAGA-G-LPGLTAARLGAT-RVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 55 ~~vLDlG~G~-G-~~~~~l~~~~~~-~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
.+|.=||+|. | .++..+.+.|.. +|++.|.++ .++.+.+ .+... . ...|..+. .....|+|+.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~--~-~~~~~~~~------~~~~aDvVil 100 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKV------EDFSPDFVML 100 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCTTGG------GGGCCSEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc--h-hcCCHHHH------hhccCCEEEE
Confidence 5788899873 2 344445555542 899999998 7666542 23211 1 11111110 1245899997
Q ss_pred cccccCCcchHHHHHHHHHHhcCCC
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
.-+. ....++++.+...++++.
T Consensus 101 avp~---~~~~~vl~~l~~~l~~~~ 122 (314)
T 3ggo_A 101 SSPV---RTFREIAKKLSYILSEDA 122 (314)
T ss_dssp CSCG---GGHHHHHHHHHHHSCTTC
T ss_pred eCCH---HHHHHHHHHHhhccCCCc
Confidence 5443 345778888888888876
No 423
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=79.73 E-value=9.1 Score=30.21 Aligned_cols=80 Identities=26% Similarity=0.322 Sum_probs=53.8
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=.|++.|. ++..+++.|. +|+.++.++ .++.+.+.+...+ ..+.++.+|+.+...- .. ..
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 567888888877553 3333456676 899999998 8777777776655 3488899998765321 11 11
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.+..|+++.+.-.
T Consensus 106 ~g~id~lvnnAg~ 118 (301)
T 3tjr_A 106 LGGVDVVFSNAGI 118 (301)
T ss_dssp HSSCSEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 2479999976543
No 424
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.56 E-value=2.9 Score=32.53 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=46.8
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhC-CCCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANG-LGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+.+.+.+.... ...++.++.+|+.+...- ..
T Consensus 4 ~~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 4 FAEKVAIITGSS-NGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence 345677766654 4444443 45565 899999887 6666555442111 113478888888764311 11
Q ss_pred ccCCCCcEEEEccc
Q 046623 120 SELGEFDMVIMSDV 133 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~ 133 (218)
...+.+|+++.+.-
T Consensus 82 ~~~g~id~lv~~Ag 95 (278)
T 1spx_A 82 GKFGKLDILVNNAG 95 (278)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01247999997654
No 425
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=79.46 E-value=14 Score=28.49 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=49.3
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-cccc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQLS-----E 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~-----~ 121 (218)
.+++++|=.|++.|. ++..+++.|. +|+.++.++ ..+.+.+.....+ .++.++.+|+.+... .... .
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYG--VHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHC--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeecCCHHHHHHHHHHHHHH
Confidence 456788877765552 2333456676 899999887 6666555554444 348888888876431 1110 1
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.+++|+++.+...
T Consensus 109 ~g~id~li~~Ag~ 121 (279)
T 3ctm_A 109 FGTIDVFVANAGV 121 (279)
T ss_dssp HSCCSEEEECGGG
T ss_pred hCCCCEEEECCcc
Confidence 2469999976543
No 426
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.32 E-value=2.7 Score=33.66 Aligned_cols=92 Identities=18% Similarity=0.095 Sum_probs=54.3
Q ss_pred CCCCeEEEECCC--CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc---cCC
Q 046623 52 FQNKSVLELGAG--AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS---ELG 123 (218)
Q Consensus 52 ~~~~~vLDlG~G--~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~---~~~ 123 (218)
.++++||-.|+. .|.....++ ..|+ +|++++.++ ..+.+++ .+.. .+ .|..+.... ... ...
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~----~g~~---~~--~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALK----AGAW---QV--INYREEDLVERLKEITGGK 208 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH----HTCS---EE--EETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC---EE--EECCCccHHHHHHHHhCCC
Confidence 568899999843 444444444 4566 899999987 7666654 2322 12 233332211 110 124
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-+.. ...++.+.++++++|+++.+
T Consensus 209 ~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 209 KVRVVYDSVG-------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CEEEEEECSC-------GGGHHHHHHTEEEEEEEEEC
T ss_pred CceEEEECCc-------hHHHHHHHHHhcCCCEEEEE
Confidence 6899886422 34567788899999955444
No 427
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.28 E-value=2.3 Score=34.38 Aligned_cols=92 Identities=21% Similarity=0.136 Sum_probs=53.6
Q ss_pred CCCeEEEECCC-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-cc--cCCCCc
Q 046623 53 QNKSVLELGAG-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-LS--ELGEFD 126 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~--~~~~~D 126 (218)
++.+||-+|+| .|...+.+++ .|+.+|++++.++ ..+.+++. . -.+ .|..+....+ .. ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a------~~v--~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--A------DRL--VNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--C------SEE--ECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--H------Hhc--cCcCccCHHHHHHHhcCCCCC
Confidence 78899999984 3455555554 4544899999887 66655431 1 112 2222221111 10 134689
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+-.-. ....++.+.++|+++|+++.+
T Consensus 234 ~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 234 VLLEFSG------NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCC------CHHHHHHHHHHHhcCCEEEEE
Confidence 9985221 135677888899999954444
No 428
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=78.81 E-value=7.8 Score=30.05 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=50.3
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecC-------------cc-hHHHHHHHHHHhCCCCceEEEEeecCCC
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDV-------------KP-LLPGLINNVEANGLGGRVEVRELVWGSD 114 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~-------------~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 114 (218)
.+++++|=-|++.|. ++..+++.|. +|+.+|. +. .++...+.....+ ..+.++.+|+.+.
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDF 85 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCH
Confidence 567788888876653 3334466676 8999987 44 5555555555544 4588888888765
Q ss_pred Ccc-cc-----ccCCCCcEEEEcccc
Q 046623 115 DLS-QL-----SELGEFDMVIMSDVF 134 (218)
Q Consensus 115 ~~~-~~-----~~~~~~D~Iv~~~~~ 134 (218)
..- .. ...++.|+++.+.-.
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 311 11 112579999976544
No 429
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=78.30 E-value=4.2 Score=32.11 Aligned_cols=63 Identities=17% Similarity=0.241 Sum_probs=38.3
Q ss_pred CCCcEEEEcccc----cCC---c----chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEE
Q 046623 123 GEFDMVIMSDVF----YDP---E----EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIEL 187 (218)
Q Consensus 123 ~~~D~Iv~~~~~----~~~---~----~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 187 (218)
++||+|+++--. ||- + ....+-..+.++|+||| .+++.+....+...|.+-.. -...|...++
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGG-tlv~~aYGyADR~SE~vV~a-lARkF~~~rv 283 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGG-SLLIRAYGYADRTSERVICV-LGRKFRSSRA 283 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEE-EEEEEECCCCSHHHHHHHHH-HHTTEEEEEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCc-eEEEEeecccccchHHHHHH-HHhhheeeee
Confidence 799999986322 111 1 12233344567889999 45555555555555555554 4678988888
No 430
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=78.22 E-value=14 Score=25.61 Aligned_cols=91 Identities=7% Similarity=0.051 Sum_probs=49.8
Q ss_pred CCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc--hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 54 NKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP--LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
..+|+=+|+ |..+..+ .+.|. .|+.+|.++ .++.+.... . ..+.++.+|..+...-....-..+|.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~-~----~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRL-G----DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHH-C----TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhh-c----CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 346777776 5555554 34454 899999873 444443322 1 23678888865443211112467899
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
|++.-. .......+....+.+.|..
T Consensus 75 vi~~~~---~d~~n~~~~~~a~~~~~~~ 99 (153)
T 1id1_A 75 ILALSD---NDADNAFVVLSAKDMSSDV 99 (153)
T ss_dssp EEECSS---CHHHHHHHHHHHHHHTSSS
T ss_pred EEEecC---ChHHHHHHHHHHHHHCCCC
Confidence 987432 1223344445556666655
No 431
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=78.10 E-value=9.4 Score=29.03 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=42.9
Q ss_pred CCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----ccCC
Q 046623 54 NKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SELG 123 (218)
Q Consensus 54 ~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~~~ 123 (218)
++++|=-|++.|. ++..+++.|. +|+.+|.++ ..+...+.. ....++.+|+.+...- .. ...+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 74 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKER------PNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTC------TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc------ccCCeEEeeCCCHHHHHHHHHHHHHHcC
Confidence 4567766765542 2333456666 899999887 555433221 2367888888765311 11 1125
Q ss_pred CCcEEEEccc
Q 046623 124 EFDMVIMSDV 133 (218)
Q Consensus 124 ~~D~Iv~~~~ 133 (218)
+.|+++.+.-
T Consensus 75 ~id~lv~nAg 84 (247)
T 3dii_A 75 RIDVLVNNAC 84 (247)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999997653
No 432
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=77.92 E-value=2.5 Score=39.73 Aligned_cols=117 Identities=20% Similarity=0.122 Sum_probs=74.4
Q ss_pred cccchhHHHHHHHHhcCCCCCCCeEEEECCCCCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeec
Q 046623 33 AWLWDSALILAQFISTHFDFQNKSVLELGAGAGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVW 111 (218)
Q Consensus 33 ~~~w~~~~~l~~~l~~~~~~~~~~vLDlG~G~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~ 111 (218)
-..|.....+...........++++||+|+|.=.-.+.+.-. ...|+.+|+.| +...+ .....-+++..|.
T Consensus 801 ~~p~~~~t~~Yn~~~~s~~~~~~~~lDlGTGPE~RiLsLiP~-~~pvtm~D~RP~ae~~~-------~w~~~T~f~~~Dy 872 (1289)
T 1ej6_A 801 ASPHVCLTMMYNFEVSSAVYDGDVVLDLGTGPEAKILELIPA-TSPVTCVDIRPTAQPSG-------CWNVRTTFLELDY 872 (1289)
T ss_dssp CCHHHHHHHHHHHHHHHHCCTTCCEEEESCCSSCGGGGTSCT-TSCEEEEESSCCCSCST-------TBSSCEEEEESCT
T ss_pred CCcchhhhhhhhhhhhheecccceEEEccCCCcceeeeecCC-CCceEEecccCchhhhc-------cccccceeeEccc
Confidence 357888777744443322566789999999874333322111 14799999999 54332 2224478999888
Q ss_pred CCCCccccccCCCCcEEEEcccccC-----CcchHHHHHHHHHHhcCCCceEEE
Q 046623 112 GSDDLSQLSELGEFDMVIMSDVFYD-----PEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 112 ~~~~~~~~~~~~~~D~Iv~~~~~~~-----~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.....- ...++|.+.|--.+.. .-.+.+.++++.+.+++.|...++
T Consensus 873 L~~~~~---~~~~~D~vt~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~ 923 (1289)
T 1ej6_A 873 LSDGWI---TGVRGDIVTCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVL 923 (1289)
T ss_dssp TSSSCG---GGCCCSEEEECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEE
T ss_pred ccccee---ecCCCcEEEEEeechhhhhccCCcHHHHHHHHHHHHHhcCccEEE
Confidence 766542 4568999998655532 345777788887777776644444
No 433
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=77.86 E-value=9.9 Score=29.52 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=50.1
Q ss_pred CCCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc----ccC
Q 046623 51 DFQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----SEL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----~~~ 122 (218)
..+++++|=-|++.|. ++..+++.|. +|+.++.++..+...+.+...+ ..+.++.+|+.+...- .. ...
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGG--GSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 3667888888876653 3334466676 8999995545444444444444 4588888888765311 11 112
Q ss_pred CCCcEEEEcccc
Q 046623 123 GEFDMVIMSDVF 134 (218)
Q Consensus 123 ~~~D~Iv~~~~~ 134 (218)
++.|+++.+.-.
T Consensus 105 g~iD~lv~nAg~ 116 (273)
T 3uf0_A 105 RRVDVLVNNAGI 116 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 579999976543
No 434
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=77.73 E-value=5.5 Score=32.36 Aligned_cols=90 Identities=9% Similarity=0.002 Sum_probs=51.4
Q ss_pred CeEEEECCC-CCHHH-HHHH-H-hCCCeEEEecCcch----HHHHHHHHHHhCCCCceEEEEeecCCCCccccc-cCCCC
Q 046623 55 KSVLELGAG-AGLPG-LTAA-R-LGATRVVLTDVKPL----LPGLINNVEANGLGGRVEVRELVWGSDDLSQLS-ELGEF 125 (218)
Q Consensus 55 ~~vLDlG~G-~G~~~-~~l~-~-~~~~~v~~~D~~~~----~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~ 125 (218)
.+||=+|+| .|..+ +.++ + .|+.+|++++.++. .+.++ ..| .+.+ |..+....+.. ..+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lG----a~~v--~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELD----ATYV--DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTT----CEEE--ETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcC----Cccc--CCCccCHHHHHHhCCCC
Confidence 899999984 35555 5556 4 35544999998753 34433 334 2222 43332211110 02378
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+|+- +.. ....++.+.++++++|+++.+
T Consensus 244 Dvvid--~~g----~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 244 DFIYE--ATG----FPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEE--CSC----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEE--CCC----ChHHHHHHHHHHhcCCEEEEE
Confidence 99884 211 134677888899999955444
No 435
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=77.53 E-value=9.4 Score=29.97 Aligned_cols=83 Identities=19% Similarity=0.274 Sum_probs=52.2
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCC--CeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGA--TRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~--~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~----- 119 (218)
.+++++|=-|++.|. ++..+++.|. .+|+.++.++ .++.+.+.+....-..++.++.+|+.+...- ..
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 356788888876553 2223344554 3899999988 7777776665542224588889998765421 11
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 122579999976543
No 436
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=77.21 E-value=6.2 Score=30.24 Aligned_cols=78 Identities=19% Similarity=0.126 Sum_probs=48.4
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccccc----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQLSE---- 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~---- 121 (218)
.+++++|=.|+ +|.++..+ ++.|. +|+.++.++ ..+...+.+...+ .++.++.+|+.+... .....
T Consensus 12 l~~k~vlITGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 12 LKAKTVLVTGG-TKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 45667776665 55555554 45565 899999887 6666666555544 347888888775431 11111
Q ss_pred --CCCCcEEEEccc
Q 046623 122 --LGEFDMVIMSDV 133 (218)
Q Consensus 122 --~~~~D~Iv~~~~ 133 (218)
.+.+|+++.+.-
T Consensus 88 ~~~~~id~li~~Ag 101 (266)
T 1xq1_A 88 MFGGKLDILINNLG 101 (266)
T ss_dssp HHTTCCSEEEEECC
T ss_pred HhCCCCcEEEECCC
Confidence 167899997543
No 437
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=77.07 E-value=8.1 Score=29.97 Aligned_cols=79 Identities=16% Similarity=0.276 Sum_probs=50.8
Q ss_pred CCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----ccC
Q 046623 53 QNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SEL 122 (218)
Q Consensus 53 ~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~~ 122 (218)
.++++|=-|++.|. ++..+++.|. +|+.++.++ .++.+.+.+...+ ..+.++.+|+.+...- .. ...
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45677777766552 2333456666 899999998 7777777776655 4578888888765311 11 112
Q ss_pred CCCcEEEEcccc
Q 046623 123 GEFDMVIMSDVF 134 (218)
Q Consensus 123 ~~~D~Iv~~~~~ 134 (218)
++.|+++.+.-.
T Consensus 80 g~iD~lVnnAG~ 91 (264)
T 3tfo_A 80 GRIDVLVNNAGV 91 (264)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 579999976543
No 438
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=76.92 E-value=6.4 Score=31.75 Aligned_cols=90 Identities=19% Similarity=0.078 Sum_probs=52.5
Q ss_pred CCCCeEEEECC-C-CCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-c---ccCCC
Q 046623 52 FQNKSVLELGA-G-AGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-L---SELGE 124 (218)
Q Consensus 52 ~~~~~vLDlG~-G-~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~---~~~~~ 124 (218)
.++.+||=.|+ | .|..+..+++.-..+|+++ .++ .++.+++ .+. +.+ | ....... . .....
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~----lGa----~~i--~-~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD----LGA----TPI--D-ASREPEDYAAEHTAGQG 216 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH----HTS----EEE--E-TTSCHHHHHHHHHTTSC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH----cCC----CEe--c-cCCCHHHHHHHHhcCCC
Confidence 57889999994 3 5566666664433489999 666 6655543 342 222 2 2222111 1 12247
Q ss_pred CcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 125 FDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 125 ~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+++-.-. .+.+..+.++|+++|+++.+
T Consensus 217 ~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 217 FDLVYDTLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEEEESSC-------THHHHHHHHHEEEEEEEEES
T ss_pred ceEEEECCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 998885211 24677788899999955543
No 439
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=76.76 E-value=8.2 Score=29.49 Aligned_cols=76 Identities=21% Similarity=0.283 Sum_probs=47.0
Q ss_pred CCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----ccC
Q 046623 54 NKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----SEL 122 (218)
Q Consensus 54 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~~~ 122 (218)
++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+... ... ...
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3466666654 4444443 55665 899999988 6666655555444 347888888876431 111 112
Q ss_pred CCCcEEEEccc
Q 046623 123 GEFDMVIMSDV 133 (218)
Q Consensus 123 ~~~D~Iv~~~~ 133 (218)
+++|+++.+.-
T Consensus 78 g~id~lv~nAg 88 (256)
T 1geg_A 78 GGFDVIVNNAG 88 (256)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999997653
No 440
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.75 E-value=18 Score=25.90 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=39.9
Q ss_pred CCCeEEEECCC-CCH-HHHHHHHh-CCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccc-cCCCCcE
Q 046623 53 QNKSVLELGAG-AGL-PGLTAARL-GATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLS-ELGEFDM 127 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~-~~~~l~~~-~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~D~ 127 (218)
.+.+|+=+|+| .|. ++..+.+. |. +|+++|.++ .++.++. .+ +.++.+|..+...-... ....+|+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 35688888876 232 22233455 65 899999998 6665432 23 45566665443210101 1356899
Q ss_pred EEEc
Q 046623 128 VIMS 131 (218)
Q Consensus 128 Iv~~ 131 (218)
|+..
T Consensus 109 vi~~ 112 (183)
T 3c85_A 109 VLLA 112 (183)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9873
No 441
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=76.72 E-value=20 Score=26.68 Aligned_cols=71 Identities=23% Similarity=0.130 Sum_probs=42.1
Q ss_pred eEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc--ccCCCCcE
Q 046623 56 SVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL--SELGEFDM 127 (218)
Q Consensus 56 ~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~--~~~~~~D~ 127 (218)
++|=.|++.| ++.. +++.|. +|+.++.++ .++.+.+.+ ..++.++.+|+.+...- .. .....+|+
T Consensus 3 ~vlVTGas~g-IG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 3 LIVITGASSG-LGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp CEEEESTTSH-HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred EEEEecCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 4666666544 4443 455666 799999987 665544432 24578888888765311 11 12244699
Q ss_pred EEEccc
Q 046623 128 VIMSDV 133 (218)
Q Consensus 128 Iv~~~~ 133 (218)
++.+..
T Consensus 76 lv~~Ag 81 (230)
T 3guy_A 76 VVHSAG 81 (230)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 987654
No 442
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=76.53 E-value=26 Score=29.63 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=24.5
Q ss_pred eEEEECCCC-C-HHHHHHHHhCCCeEEEecCcc-hHHHHHH
Q 046623 56 SVLELGAGA-G-LPGLTAARLGATRVVLTDVKP-LLPGLIN 93 (218)
Q Consensus 56 ~vLDlG~G~-G-~~~~~l~~~~~~~v~~~D~~~-~~~~a~~ 93 (218)
+|.=+|+|. | .++..+++.|. +|+++|.++ .++.+.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHc
Confidence 667778763 2 22333456665 899999998 7766554
No 443
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=76.33 E-value=10 Score=28.59 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=51.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.++..+ ..+.++.+|+.+...- .. .
T Consensus 3 l~~k~vlITGas~g-IG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 3 LNEKVALVTGASRG-IGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TTTCEEEESSCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHH
Confidence 34667776665544 4443 456666 899999998 7777777776655 3488899998765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 79 ~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 79 ENLAIDILVNNAGI 92 (247)
T ss_dssp TTCCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 23578999976544
No 444
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=76.26 E-value=9.9 Score=29.09 Aligned_cols=80 Identities=21% Similarity=0.177 Sum_probs=47.7
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc-----
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS----- 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~----- 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+....-...+.++.+|+.+...- ...
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 5 IQGKLAVVTAGSSG-LGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45677887776544 4443 355666 899999887 6666555554320012478888888765311 110
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..+ .|+++.+...
T Consensus 83 ~~g-id~lv~~Ag~ 95 (260)
T 2z1n_A 83 LGG-ADILVYSTGG 95 (260)
T ss_dssp TTC-CSEEEECCCC
T ss_pred hcC-CCEEEECCCC
Confidence 114 9999976543
No 445
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=76.06 E-value=25 Score=27.12 Aligned_cols=80 Identities=23% Similarity=0.303 Sum_probs=50.2
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-h-------HHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-L-------LPGLINNVEANGLGGRVEVRELVWGSDDLS-QL 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~-------~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 119 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.+. . ++...+.+...+ .++.++.+|+.+...- ..
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~ 80 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAG--GQGLALKCDIREEDQVRAA 80 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHT--SEEEEEECCTTCHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHH
Confidence 467788888877653 3334466676 899988775 3 444444444444 4588889998765311 11
Q ss_pred -----ccCCCCcEEEEcccc
Q 046623 120 -----SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 -----~~~~~~D~Iv~~~~~ 134 (218)
...++.|+++.+.-.
T Consensus 81 ~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 81 VAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCc
Confidence 112579999976543
No 446
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=76.05 E-value=9.8 Score=28.97 Aligned_cols=77 Identities=18% Similarity=0.257 Sum_probs=48.7
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+...+.+ + .++.++.+|+.+...- .. ..
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI---G--KKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---C--TTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567788888876553 3334456676 899999987 665554433 3 4478888888765311 11 11
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 78 ~g~id~lv~nAg~ 90 (247)
T 3rwb_A 78 TGGIDILVNNASI 90 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2579999976543
No 447
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=76.03 E-value=3.3 Score=34.82 Aligned_cols=98 Identities=21% Similarity=0.055 Sum_probs=53.5
Q ss_pred CCCCeEEEECC-C-CCHHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC---C----------
Q 046623 52 FQNKSVLELGA-G-AGLPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD---D---------- 115 (218)
Q Consensus 52 ~~~~~vLDlG~-G-~G~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~---------- 115 (218)
.++++||=.|+ | .|..++.+++....++++++.++ ..+.++ ..|....+.....|+... .
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchhhhH
Confidence 57889998886 2 45555555554334889988877 666654 334332111111111000 0
Q ss_pred -cccc--ccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 116 -LSQL--SELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 116 -~~~~--~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.... .....+|+++-.-. ...+....++++++|+++.+
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG-------RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC-------HHHHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHHhCCCceEEEECCC-------chHHHHHHHHHhcCCEEEEE
Confidence 0000 01346999985322 24567788899999955544
No 448
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.01 E-value=2.6 Score=33.78 Aligned_cols=91 Identities=19% Similarity=0.076 Sum_probs=51.5
Q ss_pred CCCC-eEEEECC--CCCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC---CccccccCC
Q 046623 52 FQNK-SVLELGA--GAGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD---DLSQLSELG 123 (218)
Q Consensus 52 ~~~~-~vLDlG~--G~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~ 123 (218)
.++. +||=.|+ |.|..++.+++ .|+ +|++++.++ ..+.+++ .|.. .++ |..+. ..... ...
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~---~~i--~~~~~~~~~~~~~-~~~ 215 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAK---EVL--AREDVMAERIRPL-DKQ 215 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCS---EEE--ECC---------C-CSC
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCc---EEE--ecCCcHHHHHHHh-cCC
Confidence 3454 8999987 35566666664 455 899999987 7777653 3432 122 21111 01111 224
Q ss_pred CCcEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 124 EFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
.+|+++-. ... +.+..+.++++++|+++++
T Consensus 216 ~~d~vid~--~g~-----~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 216 RWAAAVDP--VGG-----RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CEEEEEEC--STT-----TTHHHHHHTEEEEEEEEEC
T ss_pred cccEEEEC--CcH-----HHHHHHHHhhccCCEEEEE
Confidence 68988742 221 2466778899999955444
No 449
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=75.90 E-value=6.5 Score=29.79 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=48.6
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-ccc-----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QLS----- 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~----- 120 (218)
.+++++|=.| |+|.++..+ ++.|. +|+.++.++ ..+...+.+...+ .++.++.+|+.+...- ...
T Consensus 9 ~~~~~vlVtG-asggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 9 LDGKCAIITG-AGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETT-TTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4566777665 456666655 34455 899999988 7666666555544 3478888888764311 110
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+..
T Consensus 85 ~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 85 KLGKVDILVNNAG 97 (255)
T ss_dssp HHSSCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1247999997544
No 450
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=75.90 E-value=14 Score=28.28 Aligned_cols=81 Identities=28% Similarity=0.354 Sum_probs=53.3
Q ss_pred CCCCeEEEECC-CCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGA-GAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~-G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|+ |.|. ++..+++.|. +|+.++.++ ..+.+.+.++..+- .++.++.+|+.+...- .. .
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHHH
Confidence 56778888887 5664 3444566776 899999988 77776666644432 3588999998765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 98 ~~g~id~li~~Ag~ 111 (266)
T 3o38_A 98 KAGRLDVLVNNAGL 111 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCcEEEECCCc
Confidence 12578999976544
No 451
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.88 E-value=6.3 Score=30.26 Aligned_cols=78 Identities=24% Similarity=0.328 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...- .. .
T Consensus 4 l~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 4 MKEKVVIITGGSSG-MGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45677777666544 4443 456666 899999998 7777666654443 4588889998765311 11 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..++.|+++.+.-
T Consensus 80 ~~g~id~lv~nAg 92 (257)
T 3imf_A 80 KFGRIDILINNAA 92 (257)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1257999997654
No 452
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=75.81 E-value=11 Score=29.48 Aligned_cols=77 Identities=16% Similarity=-0.011 Sum_probs=43.8
Q ss_pred eEEEecCc--c-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCC
Q 046623 78 RVVLTDVK--P-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTG 154 (218)
Q Consensus 78 ~v~~~D~~--~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~g 154 (218)
+|..++-+ + ......+.++..+++ ++++..+ +... ....-..||+||..+.-.. ......++.+.+..+.|
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~~g~~--V~~i~~~--~~~~-~~~~L~~yDvIIl~d~~~~-~l~~~~~~~L~~yV~~G 79 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTSWQWE--FDYIPSH--VGLD-VGELLAKQDLVILSDYPAE-RMTAQAIDQLVTMVKAG 79 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHHTTCC--CEEECTT--SCBC-SSHHHHTCSEEEEESCCGG-GBCHHHHHHHHHHHHTT
T ss_pred eEEEECCCCchhHHHHHHHHHHhCCce--EEEeccc--cccc-ChhHHhcCCEEEEcCCccc-cCCHHHHHHHHHHHHhC
Confidence 45555544 3 555566666666654 6665422 1110 0012358999998764321 23467778888888888
Q ss_pred CceEEE
Q 046623 155 RHTVVW 160 (218)
Q Consensus 155 G~~~i~ 160 (218)
|.++++
T Consensus 80 GgLi~~ 85 (259)
T 3rht_A 80 CGLVML 85 (259)
T ss_dssp CEEEEE
T ss_pred CeEEEe
Confidence 854444
No 453
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=75.58 E-value=32 Score=29.62 Aligned_cols=120 Identities=20% Similarity=0.176 Sum_probs=68.2
Q ss_pred CCCCeEEEECCC-CCHH--HHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 52 FQNKSVLELGAG-AGLP--GLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 52 ~~~~~vLDlG~G-~G~~--~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
++.++|.=+|-| +|.. +..+.+.|. +|++.|... .. ..+.++..| +.+..+. .... ....+|+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~-~V~~sD~~~~~~--~~~~L~~~g----i~~~~G~-~~~~-----~~~~~d~ 83 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGH-TVTGSDANIYPP--MSTQLEQAG----VTIEEGY-LIAH-----LQPAPDL 83 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCCTT--HHHHHHHTT----CEEEESC-CGGG-----GCSCCSE
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCC-EEEEECCCCCcH--HHHHHHHCC----CEEECCC-CHHH-----cCCCCCE
Confidence 567788888876 5543 334466776 899999864 21 122334444 4454431 1111 2245899
Q ss_pred EEEcccccCC-cchHHH----------HHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEE
Q 046623 128 VIMSDVFYDP-EEMVGL----------GKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRV 184 (218)
Q Consensus 128 Iv~~~~~~~~-~~~~~~----------l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~ 184 (218)
|+.++-+... +..... .+.+.+.+.++...+.++.+..+..+...+..+++..|++.
T Consensus 84 vV~Spgi~~~~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~ 151 (524)
T 3hn7_A 84 VVVGNAMKRGMDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDA 151 (524)
T ss_dssp EEECTTCCTTSHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCC
T ss_pred EEECCCcCCCCHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 9987765321 111111 12234433333345666777778888899999988888764
No 454
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=75.37 E-value=2.4 Score=35.09 Aligned_cols=98 Identities=24% Similarity=0.167 Sum_probs=58.7
Q ss_pred CCCCCeEEEECCCC-CHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc--cccc---cC
Q 046623 51 DFQNKSVLELGAGA-GLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL--SQLS---EL 122 (218)
Q Consensus 51 ~~~~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~---~~ 122 (218)
..++.+||-+|+|. |..++.+++ .|+.+|+++|.++ .++.+++ .| .+++ |..+... +... ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG----a~~i--~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG----FETI--DLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT----CEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC----CcEE--cCCCcchHHHHHHHHhCC
Confidence 35788999999864 666666664 5666899999988 7766542 33 2322 3332221 1111 12
Q ss_pred CCCcEEEEcccccCCc----------chHHHHHHHHHHhcCCCceEEE
Q 046623 123 GEFDMVIMSDVFYDPE----------EMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 123 ~~~D~Iv~~~~~~~~~----------~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
..+|+|+-.-. ... .....++.+.++|+++|+++++
T Consensus 253 ~g~Dvvid~~g--~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVDAVG--FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEECSC--TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEECCC--CccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 36999984221 110 1234678888999999955443
No 455
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=75.27 E-value=13 Score=28.72 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=46.1
Q ss_pred CeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-c-----cccCCC
Q 046623 55 KSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-Q-----LSELGE 124 (218)
Q Consensus 55 ~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~-----~~~~~~ 124 (218)
++||=-|++.|. .+..+++.|+ +|+.+|.++ ..+.+.+ .+ .++..+.+|+.+...- . ....++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~----~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAK----ER--PNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHT----TC--TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----hc--CCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 567766777663 3444567777 899999987 5544322 22 3477888888765311 1 113368
Q ss_pred CcEEEEcccc
Q 046623 125 FDMVIMSDVF 134 (218)
Q Consensus 125 ~D~Iv~~~~~ 134 (218)
.|+++.|...
T Consensus 76 iDiLVNNAG~ 85 (247)
T 3ged_A 76 IDVLVNNACR 85 (247)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999976543
No 456
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=75.21 E-value=3.2 Score=33.26 Aligned_cols=93 Identities=22% Similarity=0.080 Sum_probs=52.7
Q ss_pred CCCC-eEEEECC-C-CCHHHHHHH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEe-ecCCCCccccccCCCC
Q 046623 52 FQNK-SVLELGA-G-AGLPGLTAA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVREL-VWGSDDLSQLSELGEF 125 (218)
Q Consensus 52 ~~~~-~vLDlG~-G-~G~~~~~l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~ 125 (218)
.++. +||=.|+ | .|..++.++ ..|+ ++++++.++ ..+.+++ .|.. .++.. +......... ....+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~-~~~~~ 218 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ----LGAS---EVISREDVYDGTLKAL-SKQQW 218 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH----HTCS---EEEEHHHHCSSCCCSS-CCCCE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEEECCCchHHHHHHh-hcCCc
Confidence 3454 8999997 3 555556555 4565 799999988 7777654 3432 12211 1100101111 22468
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+++-. .. .+.+....++++++|+++++
T Consensus 219 d~vid~--~g-----~~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 219 QGAVDP--VG-----GKQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEES--CC-----THHHHHHHTTEEEEEEEEEC
T ss_pred cEEEEC--Cc-----HHHHHHHHHhhcCCCEEEEE
Confidence 988742 21 13577788899999955444
No 457
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=75.16 E-value=18 Score=27.70 Aligned_cols=81 Identities=21% Similarity=0.217 Sum_probs=54.8
Q ss_pred CCCCCeEEEECCCC--CH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-c-----
Q 046623 51 DFQNKSVLELGAGA--GL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-Q----- 118 (218)
Q Consensus 51 ~~~~~~vLDlG~G~--G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~----- 118 (218)
+++++++|=-|+++ |. .+..+++.|+ +|+.++.++ ..+.+.+.++..+- .++.++.+|+.+...- .
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHH
Confidence 46788999888543 52 4555677787 899999998 88877777665442 2478888888765311 1
Q ss_pred cccCCCCcEEEEccc
Q 046623 119 LSELGEFDMVIMSDV 133 (218)
Q Consensus 119 ~~~~~~~D~Iv~~~~ 133 (218)
....++.|+++.|..
T Consensus 81 ~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHHhCCCCEEEeccc
Confidence 113378999997643
No 458
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=74.86 E-value=37 Score=28.52 Aligned_cols=122 Identities=22% Similarity=0.141 Sum_probs=68.9
Q ss_pred CCCCeEEEECCCCCHHHH--HHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEE
Q 046623 52 FQNKSVLELGAGAGLPGL--TAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMV 128 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~--~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~I 128 (218)
.++++|+=+|.|....+. .+.+.|. +|++.|.++ ......+.++..| +.+..+.. .... ..+.+|+|
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~g----i~~~~g~~-~~~~----~~~~~d~v 76 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEEG----IKVVCGSH-PLEL----LDEDFCYM 76 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHTT----CEEEESCC-CGGG----GGSCEEEE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhCC----CEEEECCC-hHHh----hcCCCCEE
Confidence 567889999988544433 2356666 999999865 3222233445544 44543321 1111 12238999
Q ss_pred EEcccccCC-cchHH----------HHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 129 IMSDVFYDP-EEMVG----------LGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 129 v~~~~~~~~-~~~~~----------~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
+.++-+... +.... -.+.+.++.+ +..+.++.+..+..+...+..++...|....
T Consensus 77 v~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~--~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~ 142 (451)
T 3lk7_A 77 IKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSE--SQLIGITGSNGKTTTTTMIAEVLNAGGQRGL 142 (451)
T ss_dssp EECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCC--SEEEEEECSSCHHHHHHHHHHHHHHTTCCEE
T ss_pred EECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcC--CCEEEEECCCCHHHHHHHHHHHHHhcCCCEE
Confidence 987665321 11111 1122333332 3556666666677888999998888887653
No 459
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=74.86 E-value=11 Score=29.41 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=50.7
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ ..+.++.+|+.+...- .. ..
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356788888766553 2333456676 899999988 7777776666555 4588899998765311 10 12
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 99 ~g~id~lv~nAg~ 111 (279)
T 3sju_A 99 FGPIGILVNSAGR 111 (279)
T ss_dssp HCSCCEEEECCCC
T ss_pred cCCCcEEEECCCC
Confidence 2579999976543
No 460
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=74.83 E-value=7.2 Score=30.30 Aligned_cols=80 Identities=16% Similarity=0.229 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...- .. ..
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567788877765542 2333456676 899999998 7777777666655 4488888888765311 11 12
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 101 ~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 101 GIDVDILVNNAGI 113 (271)
T ss_dssp TCCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 3579999976544
No 461
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=74.79 E-value=13 Score=28.61 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=24.5
Q ss_pred CCCeEEEECCC-CCH-HHHHHHHhCCCeEEEecCcc
Q 046623 53 QNKSVLELGAG-AGL-PGLTAARLGATRVVLTDVKP 86 (218)
Q Consensus 53 ~~~~vLDlG~G-~G~-~~~~l~~~~~~~v~~~D~~~ 86 (218)
++.+|+=+||| .|. .+..+++.|..+++.+|.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 35689999997 333 34445778888999999773
No 462
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=74.54 E-value=11 Score=29.45 Aligned_cols=60 Identities=13% Similarity=-0.027 Sum_probs=38.8
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEec-Ccc-hHHHHHHHHH-HhCCCCceEEEEeecCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTD-VKP-LLPGLINNVE-ANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D-~~~-~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~ 115 (218)
.+++++|=-|++. .++..+ ++.|. +|+.++ .++ ..+.+.+.+. ..+ .++.++.+|+.+..
T Consensus 7 l~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 7 PTVPVALVTGAAK-RLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp -CCCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 3566777666554 444443 55666 899999 887 7666665554 333 35888889987654
No 463
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=74.53 E-value=10 Score=29.67 Aligned_cols=80 Identities=19% Similarity=0.225 Sum_probs=51.4
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+ ..+.++.+|+.+...- .. ..
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467788888776553 2333456676 899999988 7777666665444 4588888898765311 11 12
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 103 ~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 103 FGHLDIVVANAGI 115 (283)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 2589999976543
No 464
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=74.42 E-value=11 Score=26.28 Aligned_cols=70 Identities=19% Similarity=0.079 Sum_probs=38.5
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
.++.+|+=+|+| .++.. +.+.|. +|+.+|.++ .++.++. .. ...++.+|..+...-.......+|
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHcCcccCC
Confidence 456789999875 34433 344555 899999987 6544321 11 244555554332110000124689
Q ss_pred EEEEc
Q 046623 127 MVIMS 131 (218)
Q Consensus 127 ~Iv~~ 131 (218)
+|+..
T Consensus 87 ~Vi~~ 91 (155)
T 2g1u_A 87 MVFAF 91 (155)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98874
No 465
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=74.12 E-value=15 Score=28.25 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=51.1
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
..++++|=.|++ |.++..+ ++.|. +|++++.++ ..+.+.+.++..+ .++.++.+|+.+... ... .
T Consensus 29 l~~k~vlITGas-ggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 29 VTGEIVLITGAG-HGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 567788877765 4455444 45565 899999988 7776666665544 358888999876531 111 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..+.+|+++.+...
T Consensus 105 ~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 105 EIGDVSILVNNAGV 118 (272)
T ss_dssp HTCCCSEEEECCCC
T ss_pred HCCCCcEEEECCCc
Confidence 22579999976543
No 466
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=74.09 E-value=18 Score=30.85 Aligned_cols=41 Identities=29% Similarity=0.405 Sum_probs=28.4
Q ss_pred CCCCeEEEECCCC-CH-HHHHHHHhCCCeEEEecCcc-hHHHHHH
Q 046623 52 FQNKSVLELGAGA-GL-PGLTAARLGATRVVLTDVKP-LLPGLIN 93 (218)
Q Consensus 52 ~~~~~vLDlG~G~-G~-~~~~l~~~~~~~v~~~D~~~-~~~~a~~ 93 (218)
....+|.=+|+|. |. ++..+++.|. +|+++|.++ .++.+++
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~ 49 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNN 49 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred CCCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHC
Confidence 3456888899883 42 3444567666 899999998 7776654
No 467
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=74.03 E-value=32 Score=27.46 Aligned_cols=118 Identities=18% Similarity=0.106 Sum_probs=66.2
Q ss_pred CCeEEEECCC-CCHH--HHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccC-CCCcEE
Q 046623 54 NKSVLELGAG-AGLP--GLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSEL-GEFDMV 128 (218)
Q Consensus 54 ~~~vLDlG~G-~G~~--~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~D~I 128 (218)
.++|.=+|-| +|.. +..+.+.|. +|++.|..+ .. ..+.++..+ +.+..+. .... .. ..+|+|
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~~~--~~~~L~~~g----i~v~~g~-~~~~-----l~~~~~d~v 70 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMYPP--MSTQLEALG----IDVYEGF-DAAQ-----LDEFKADVY 70 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCCTT--HHHHHHHTT----CEEEESC-CGGG-----GGSCCCSEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCCcH--HHHHHHhCC----CEEECCC-CHHH-----cCCCCCCEE
Confidence 3577778775 5553 334567776 999999865 21 122234444 4444321 1111 12 358999
Q ss_pred EEcccccCC-cchHHH----------HHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEE
Q 046623 129 IMSDVFYDP-EEMVGL----------GKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRV 184 (218)
Q Consensus 129 v~~~~~~~~-~~~~~~----------l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~ 184 (218)
+.++-+... +..... .+.+.+.+..+...+.++.+..+..+...+..+++..|...
T Consensus 71 V~Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 137 (326)
T 3eag_A 71 VIGNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAP 137 (326)
T ss_dssp EECTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTCCC
T ss_pred EECCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 987765321 111111 12334433333345666666677888899999888888754
No 468
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=73.94 E-value=7.8 Score=29.39 Aligned_cols=77 Identities=19% Similarity=0.348 Sum_probs=47.5
Q ss_pred CCCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-c-cccCC
Q 046623 51 DFQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-Q-LSELG 123 (218)
Q Consensus 51 ~~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~~ 123 (218)
..++++||=.|++.| ++.. +++.|. +|+.++.++ .++.+.+.+. ..+.+..+|+.+...- . ....+
T Consensus 11 ~~~~k~vlVTGas~g-IG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 11 DLTGKTSLITGASSG-IGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp CCTTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCS
T ss_pred cCCCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcC
Confidence 356778887776554 4443 355665 899999887 6666544431 3478888887654311 1 11235
Q ss_pred CCcEEEEcccc
Q 046623 124 EFDMVIMSDVF 134 (218)
Q Consensus 124 ~~D~Iv~~~~~ 134 (218)
..|+++.+...
T Consensus 84 ~id~li~~Ag~ 94 (249)
T 3f9i_A 84 NLDILVCNAGI 94 (249)
T ss_dssp CCSEEEECCC-
T ss_pred CCCEEEECCCC
Confidence 79999976543
No 469
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=73.92 E-value=30 Score=27.06 Aligned_cols=121 Identities=17% Similarity=0.147 Sum_probs=68.3
Q ss_pred CCCCCCeEEEECCCCCHHHHH--HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCc
Q 046623 50 FDFQNKSVLELGAGAGLPGLT--AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFD 126 (218)
Q Consensus 50 ~~~~~~~vLDlG~G~G~~~~~--l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D 126 (218)
...+++++|=+|+|-..-++. ++..|..+++.++.+. ..+...+.+.... ....+.. ... ..+.+|
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~--~~~~~~~---~~~------~~~~~d 189 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGF--PGLTVST---QFS------GLEDFD 189 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHC--TTCEEES---CCS------CSTTCS
T ss_pred CCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccC--Ccceehh---hhh------hhhccc
Confidence 346788999999986654444 3567878999999887 5555444444332 1122211 111 235689
Q ss_pred EEEEcccccCCcc-hHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 127 MVIMSDVFYDPEE-MVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 127 ~Iv~~~~~~~~~~-~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
+|+-..+...... ..++-......++++. ++....+.+....+++.. ++.|..+.
T Consensus 190 liiNaTp~Gm~~~~~~p~~~~~~~~l~~~~---~v~D~vY~P~~T~ll~~A-~~~G~~~~ 245 (269)
T 3tum_A 190 LVANASPVGMGTRAELPLSAALLATLQPDT---LVADVVTSPEITPLLNRA-RQVGCRIQ 245 (269)
T ss_dssp EEEECSSTTCSTTCCCSSCHHHHHTCCTTS---EEEECCCSSSSCHHHHHH-HHHTCEEE
T ss_pred ccccCCccccCCCCCCCCChHHHhccCCCc---EEEEEccCCCCCHHHHHH-HHCcCEEE
Confidence 9997555542111 1122223345567776 233333445566777877 78887654
No 470
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=73.83 E-value=25 Score=26.14 Aligned_cols=71 Identities=21% Similarity=0.193 Sum_probs=44.6
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCce-EEEEeecCCCCccccccCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRV-EVRELVWGSDDLSQLSELGEF 125 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~ 125 (218)
.++++||=.|+ +|.++..+ ++.|. +|++++.++ ..+.... . .+ .++.+|+. ..... ..+.+
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~----~----~~~~~~~~Dl~-~~~~~--~~~~~ 85 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRE----R----GASDIVVANLE-EDFSH--AFASI 85 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----T----TCSEEEECCTT-SCCGG--GGTTC
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHh----C----CCceEEEcccH-HHHHH--HHcCC
Confidence 56778887764 56555554 44555 899999988 6554332 1 36 88889987 22221 33579
Q ss_pred cEEEEccccc
Q 046623 126 DMVIMSDVFY 135 (218)
Q Consensus 126 D~Iv~~~~~~ 135 (218)
|+|+.+....
T Consensus 86 D~vi~~ag~~ 95 (236)
T 3e8x_A 86 DAVVFAAGSG 95 (236)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999765543
No 471
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=73.63 E-value=16 Score=27.60 Aligned_cols=78 Identities=18% Similarity=0.319 Sum_probs=49.3
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-cccc-----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQLS----- 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~----- 120 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+...+.+...+ .++.++.+|+.+... ....
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHH
Confidence 456788877754 5555444 45565 899999887 6666655555544 348888999876431 1110
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+..
T Consensus 87 ~~~~id~vi~~Ag 99 (260)
T 3awd_A 87 QEGRVDILVACAG 99 (260)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899997643
No 472
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=73.61 E-value=8.7 Score=30.10 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=49.4
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhC---CCCceEEEEeecCCCCc-cccc--
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANG---LGGRVEVRELVWGSDDL-SQLS-- 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~-~~~~-- 120 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++.++ ..+.+.+.+.... ...++.++.+|+.+... ....
T Consensus 16 l~~k~vlVTGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGA-TGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 456788877754 5555544 45565 899999887 7666665554410 11458888899876531 1110
Q ss_pred ---cCCCCcEEEEccc
Q 046623 121 ---ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ---~~~~~D~Iv~~~~ 133 (218)
..+++|+++.+..
T Consensus 94 ~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 1247999997654
No 473
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=73.30 E-value=6.8 Score=30.64 Aligned_cols=79 Identities=27% Similarity=0.390 Sum_probs=50.8
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
..++++|=-|++.|. ++..+++.|. +|+.++.++ .++.+.+.+...+ .++.++.+|+.+...- .. ..
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467778877766552 3333456676 899999998 7777666665444 4578888888765311 11 11
Q ss_pred CCCCcEEEEccc
Q 046623 122 LGEFDMVIMSDV 133 (218)
Q Consensus 122 ~~~~D~Iv~~~~ 133 (218)
.++.|+++.+.-
T Consensus 83 ~g~iD~lvnnAg 94 (280)
T 3tox_A 83 FGGLDTAFNNAG 94 (280)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257999997654
No 474
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=73.30 E-value=16 Score=28.61 Aligned_cols=114 Identities=20% Similarity=0.185 Sum_probs=59.6
Q ss_pred CCCCCeEEEECCCC-C-HHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcE
Q 046623 51 DFQNKSVLELGAGA-G-LPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDM 127 (218)
Q Consensus 51 ~~~~~~vLDlG~G~-G-~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~ 127 (218)
..+++++|=+|+|. | .....+++.|..+++.++.++ ..+...+.+.. ..+... ++.+. ....+|+
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l------~~~~~Di 184 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEAL------EGQSFDI 184 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGG------TTCCCSE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHh------cccCCCE
Confidence 46788999999871 1 122234566767899999887 55544444322 123333 22211 1257999
Q ss_pred EEEcccccCCcchHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcE
Q 046623 128 VIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFR 183 (218)
Q Consensus 128 Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~ 183 (218)
|+..-+.........+ -...++++. + +....+.+....+++.. ++.|..
T Consensus 185 vInaTp~gm~~~~~~i---~~~~l~~~~--~-V~DlvY~P~~T~ll~~A-~~~G~~ 233 (272)
T 3pwz_A 185 VVNATSASLTADLPPL---PADVLGEAA--L-AYELAYGKGLTPFLRLA-REQGQA 233 (272)
T ss_dssp EEECSSGGGGTCCCCC---CGGGGTTCS--E-EEESSCSCCSCHHHHHH-HHHSCC
T ss_pred EEECCCCCCCCCCCCC---CHHHhCcCC--E-EEEeecCCCCCHHHHHH-HHCCCC
Confidence 9975444311110011 013567766 2 22223334445677776 777764
No 475
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=73.20 E-value=35 Score=27.54 Aligned_cols=80 Identities=20% Similarity=0.272 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-h-------HHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-L-------LPGLINNVEANGLGGRVEVRELVWGSDDLS-QL 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~-------~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 119 (218)
.+++++|=.|++.|. ++..+++.|. +|+.++.++ . ++.+.+.++..+ .++.++.+|+.+...- ..
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVG--GKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHH
Confidence 567888888876553 2333456666 899988776 4 445555555554 4588888888765311 11
Q ss_pred -----ccCCCCcEEEEcccc
Q 046623 120 -----SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 -----~~~~~~D~Iv~~~~~ 134 (218)
...+..|+++.+.-.
T Consensus 120 ~~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 112589999976543
No 476
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=73.19 E-value=15 Score=28.51 Aligned_cols=82 Identities=23% Similarity=0.348 Sum_probs=52.4
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCC-CceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLG-GRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+...+.. ..+.++.+|+.+...- .. .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 567788888766552 2333456676 899999998 777777666654421 2578888888765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 12578999976543
No 477
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=73.14 E-value=7.4 Score=31.78 Aligned_cols=94 Identities=21% Similarity=0.151 Sum_probs=50.9
Q ss_pred CCCCCeEEEECC-C-CCHHHHHHHH-hCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-cccccCCCC
Q 046623 51 DFQNKSVLELGA-G-AGLPGLTAAR-LGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQLSELGEF 125 (218)
Q Consensus 51 ~~~~~~vLDlG~-G-~G~~~~~l~~-~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~ 125 (218)
..++.+||=.|+ | .|...+.+++ .|+ +|++++ ++ ..+.++ ..|.. .++ |..+... ........+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa~---~v~--~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVR----KLGAD---DVI--DYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTCS---EEE--ETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHH----HcCCC---EEE--ECCchHHHHHHhhcCCC
Confidence 356889999983 3 5566666664 455 899988 55 555543 33432 222 3222221 111122579
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+|+-.-. . ....+....++++++|+++.+
T Consensus 250 D~vid~~g--~---~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 250 DFILDNVG--G---STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp SEEEESSC--T---THHHHGGGGBCSSSCCEEEES
T ss_pred CEEEECCC--C---hhhhhHHHHHhhcCCcEEEEe
Confidence 99884211 1 112345556678999954443
No 478
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=73.09 E-value=12 Score=29.02 Aligned_cols=79 Identities=22% Similarity=0.248 Sum_probs=51.2
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=-|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+...+. .+.++.+|+.+...- .. .
T Consensus 26 l~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 26 LDKQVAIVTGASRG-IGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHHH
Confidence 45667776665544 4443 456666 899999998 77777777766653 478888888765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 102 ~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 102 EFGALNVLVNNAGI 115 (270)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 22579999976543
No 479
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=72.83 E-value=16 Score=28.31 Aligned_cols=78 Identities=21% Similarity=0.205 Sum_probs=49.8
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.++..+ .++.++.+|+.+...- .. .
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 45678887776544 4443 355665 899999988 7766666665544 3478888888765311 10 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+.-
T Consensus 96 ~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 96 RYGPVDVLVNNAG 108 (277)
T ss_dssp HTCSCSEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 2257999997654
No 480
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=72.66 E-value=15 Score=28.28 Aligned_cols=80 Identities=23% Similarity=0.262 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc--hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP--LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.|. ++..+++.|. +|+.++.+. ..+...+.++..+ .++.++.+|+.+...- .. .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKG--YKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 567788877766552 2333456666 899888844 5566666666655 4588899888765311 11 1
Q ss_pred cCCCCcEEEEcccc
Q 046623 121 ELGEFDMVIMSDVF 134 (218)
Q Consensus 121 ~~~~~D~Iv~~~~~ 134 (218)
..++.|+++.+.-.
T Consensus 104 ~~g~id~li~nAg~ 117 (271)
T 4iin_A 104 SDGGLSYLVNNAGV 117 (271)
T ss_dssp HHSSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 12579999976544
No 481
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=72.60 E-value=7.6 Score=29.77 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=47.4
Q ss_pred CCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-h-HHHHHHHHHHh-CCCCceEEEEeecCCCCc-ccc-----
Q 046623 53 QNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-L-LPGLINNVEAN-GLGGRVEVRELVWGSDDL-SQL----- 119 (218)
Q Consensus 53 ~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~-~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~-~~~----- 119 (218)
+++++|=.|++ |.++..+ ++.|. +|+.++.++ . .+.+.+.+... + .++.++.+|+.+... ...
T Consensus 3 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 78 (260)
T 1x1t_A 3 KGKVAVVTGST-SGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 45677766654 4444444 55565 899999887 6 66665555432 3 347888888876431 111
Q ss_pred ccCCCCcEEEEcccc
Q 046623 120 SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~ 134 (218)
...+++|+++.+.-.
T Consensus 79 ~~~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 79 RQMGRIDILVNNAGI 93 (260)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 112579999976543
No 482
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=72.46 E-value=18 Score=27.70 Aligned_cols=80 Identities=23% Similarity=0.243 Sum_probs=49.5
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+.......++.++.+|+.+... ... .
T Consensus 11 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 11 FTDRVVLITGGGSG-LGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45778888876554 4443 455666 899999988 666665555443111347888888876531 111 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+++|+++.+.-
T Consensus 89 ~~g~id~lv~nAg 101 (267)
T 1iy8_A 89 RFGRIDGFFNNAG 101 (267)
T ss_dssp HHSCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1247899997653
No 483
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=72.40 E-value=13 Score=29.75 Aligned_cols=60 Identities=13% Similarity=-0.031 Sum_probs=38.5
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEec-Ccc-hHHHHHHHHH-HhCCCCceEEEEeecCCCC
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTD-VKP-LLPGLINNVE-ANGLGGRVEVRELVWGSDD 115 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D-~~~-~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~ 115 (218)
.+++++|=.|++ |.++..+ ++.|. +|+.++ .++ ..+.+.+.+. ..+ .++.++.+|+.+..
T Consensus 44 l~~k~~lVTGas-~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 44 PTVPVALVTGAA-KRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 110 (328)
T ss_dssp -CCCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred cCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCCCch
Confidence 356677766654 4444444 45565 899999 887 6666665554 333 35888889987654
No 484
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=72.40 E-value=6.5 Score=30.65 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=47.6
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+...+.+...+ ++.++.+|+.+...- .. .
T Consensus 27 l~~k~vlVTGas~g-IG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 27 LAGRIALVTGGSRG-IGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHH
Confidence 46778887776544 4443 355665 899999987 6665555443322 477788887764311 11 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+.-
T Consensus 102 ~~g~iD~lvnnAg 114 (276)
T 2b4q_A 102 LSARLDILVNNAG 114 (276)
T ss_dssp HCSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 2257999997654
No 485
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=72.36 E-value=15 Score=29.62 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=48.4
Q ss_pred CeEEEECCCCCHHHHH---HH-HhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccc-cc---cCCCC
Q 046623 55 KSVLELGAGAGLPGLT---AA-RLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQ-LS---ELGEF 125 (218)
Q Consensus 55 ~~vLDlG~G~G~~~~~---l~-~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~---~~~~~ 125 (218)
.+|| +..|+|..++. ++ ..|+ +|++++.++ ..+.+++ .|.. .++ |..+..... .. ....+
T Consensus 166 ~~vl-i~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~--~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 166 KAFV-MTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKD----IGAA---HVL--NEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp SEEE-ESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHH----HTCS---EEE--ETTSTTHHHHHHHHHHHHCC
T ss_pred CEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC---EEE--ECCcHHHHHHHHHHhcCCCC
Confidence 4554 54455554443 44 4566 999999888 7777653 3422 222 222222111 10 11379
Q ss_pred cEEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 126 DMVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 126 D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
|+++-.-. ...+..+.++|+++|+++.+
T Consensus 235 D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 235 RIFLDAVT-------GPLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp CEEEESSC-------HHHHHHHHHHSCTTCEEEEC
T ss_pred cEEEECCC-------ChhHHHHHhhhcCCCEEEEE
Confidence 99985221 22346778899999955544
No 486
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=72.29 E-value=10 Score=30.54 Aligned_cols=127 Identities=18% Similarity=0.124 Sum_probs=62.8
Q ss_pred CCCCCCeEEEECCCCCH--HHHHHHHhCCCeEEEecCc---c-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCC
Q 046623 50 FDFQNKSVLELGAGAGL--PGLTAARLGATRVVLTDVK---P-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELG 123 (218)
Q Consensus 50 ~~~~~~~vLDlG~G~G~--~~~~l~~~~~~~v~~~D~~---~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 123 (218)
...+++++|=+|+|.-. ....+++.|+.+++.++.+ . ..+.+.+.+.... . ..+...++.+.... .....
T Consensus 144 ~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~--~~v~~~~~~~l~~~-~~~l~ 219 (312)
T 3t4e_A 144 FDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-D--CVVTVTDLADQHAF-TEALA 219 (312)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHH-HHHHH
T ss_pred CCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-C--cceEEechHhhhhh-Hhhcc
Confidence 34678899999986221 2233456777789999888 4 3333333332221 1 23333344331000 00123
Q ss_pred CCcEEEEcccccCCc-chHHHHHHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEE
Q 046623 124 EFDMVIMSDVFYDPE-EMVGLGKTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVI 185 (218)
Q Consensus 124 ~~D~Iv~~~~~~~~~-~~~~~l~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~ 185 (218)
.+|+||..-+....+ ....++. -...++++. ++....+.+....+++.. ++.|....
T Consensus 220 ~~DiIINaTp~Gm~~~~~~~~~~-~~~~l~~~~---~v~D~vY~P~~T~ll~~A-~~~G~~~~ 277 (312)
T 3t4e_A 220 SADILTNGTKVGMKPLENESLIG-DVSLLRPEL---LVTECVYNPHMTKLLQQA-QQAGCKTI 277 (312)
T ss_dssp HCSEEEECSSTTSTTSTTCCSCC-CGGGSCTTC---EEEECCCSSSSCHHHHHH-HHTTCEEE
T ss_pred CceEEEECCcCCCCCCCCCcccC-CHHHcCCCC---EEEEeccCCCCCHHHHHH-HHCCCeEE
Confidence 589999655543211 1011100 012456655 233333345556777777 88887653
No 487
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=72.07 E-value=18 Score=28.04 Aligned_cols=80 Identities=21% Similarity=0.312 Sum_probs=49.7
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCc----------------c-hHHHHHHHHHHhCCCCceEEEEeec
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVK----------------P-LLPGLINNVEANGLGGRVEVRELVW 111 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~----------------~-~~~~a~~~~~~~~~~~~~~~~~~d~ 111 (218)
.+++++|=-|++.|. ++..+++.|. +|+.+|.+ . .++.+.+.+...+ .++.++.+|+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 85 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDV 85 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCC
Confidence 567788888877663 3334466676 89999876 3 4444444444444 4588888898
Q ss_pred CCCCcc-cc-----ccCCCCcEEEEcccc
Q 046623 112 GSDDLS-QL-----SELGEFDMVIMSDVF 134 (218)
Q Consensus 112 ~~~~~~-~~-----~~~~~~D~Iv~~~~~ 134 (218)
.+...- .. ...++.|+++.+.-.
T Consensus 86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 765311 11 112579999976543
No 488
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=71.74 E-value=30 Score=26.11 Aligned_cols=85 Identities=19% Similarity=0.180 Sum_probs=47.0
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCC-C-cccc-----
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSD-D-LSQL----- 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~----- 119 (218)
.+++++|=.|+ +|.++..+ ++.|...|+.++.++ . +.+.+..+... ...+.++.+|+.+. . ....
T Consensus 3 l~~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 3 LTNKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHH
Confidence 35678887876 45555554 455663488888775 3 22222212211 23578888898765 2 1111
Q ss_pred ccCCCCcEEEEcccccCCcc
Q 046623 120 SELGEFDMVIMSDVFYDPEE 139 (218)
Q Consensus 120 ~~~~~~D~Iv~~~~~~~~~~ 139 (218)
...+.+|+++.+.-....++
T Consensus 80 ~~~g~id~lv~~Ag~~~~~~ 99 (254)
T 1sby_A 80 DQLKTVDILINGAGILDDHQ 99 (254)
T ss_dssp HHHSCCCEEEECCCCCCTTC
T ss_pred HhcCCCCEEEECCccCCHHH
Confidence 11247999997665433333
No 489
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=71.52 E-value=16 Score=27.90 Aligned_cols=78 Identities=23% Similarity=0.293 Sum_probs=49.4
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+...+ .++.++.+|+.+...- .. .
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 5 FNGKVCLVTGAGGN-IGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45678887776554 4443 355665 899999988 7766666555444 3478888888765311 00 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+.-
T Consensus 81 ~~g~id~lv~nAg 93 (262)
T 1zem_A 81 DFGKIDFLFNNAG 93 (262)
T ss_dssp HHSCCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1247999997653
No 490
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=71.31 E-value=29 Score=26.85 Aligned_cols=79 Identities=14% Similarity=0.189 Sum_probs=45.7
Q ss_pred CCCCeEEEECCCCCHHHHH----HHHhCCCeEEEecCcc--hHHHHHHHHH-HhCCCCceEEEEeecCC----CC-cccc
Q 046623 52 FQNKSVLELGAGAGLPGLT----AARLGATRVVLTDVKP--LLPGLINNVE-ANGLGGRVEVRELVWGS----DD-LSQL 119 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~----l~~~~~~~v~~~D~~~--~~~~a~~~~~-~~~~~~~~~~~~~d~~~----~~-~~~~ 119 (218)
.+++++|=.|++.| ++.. +++.|. +|+.++.++ ..+.+.+.+. ..+ .++.++.+|+.+ .. ....
T Consensus 21 l~~k~~lVTGas~g-IG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 21 MEAPAAVVTGAAKR-IGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp -CCCEEEETTCSSH-HHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHHH
Confidence 45667777666544 4443 456676 899888775 3444444443 333 458888899877 22 1111
Q ss_pred -----ccCCCCcEEEEcccc
Q 046623 120 -----SELGEFDMVIMSDVF 134 (218)
Q Consensus 120 -----~~~~~~D~Iv~~~~~ 134 (218)
...+++|+++.+.-.
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCCC
Confidence 012579999976543
No 491
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=70.94 E-value=7.5 Score=30.97 Aligned_cols=93 Identities=23% Similarity=0.073 Sum_probs=50.7
Q ss_pred CCCCCCeEEEEC-CC-CCHHHHHHHHhCCCeEEEecCcchHHHHHHHHHHhCCCCceEEEEeecCCCC-ccccccCCCCc
Q 046623 50 FDFQNKSVLELG-AG-AGLPGLTAARLGATRVVLTDVKPLLPGLINNVEANGLGGRVEVRELVWGSDD-LSQLSELGEFD 126 (218)
Q Consensus 50 ~~~~~~~vLDlG-~G-~G~~~~~l~~~~~~~v~~~D~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~D 126 (218)
...++.+||=.| +| .|..++.+++.-..+|++++.++..+.+ +..|.. .++ |..+.. ... ....+|
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~----~~lGa~---~~i--~~~~~~~~~~--~~~g~D 217 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFL----KALGAE---QCI--NYHEEDFLLA--ISTPVD 217 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHH----HHHTCS---EEE--ETTTSCHHHH--CCSCEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHH----HHcCCC---EEE--eCCCcchhhh--hccCCC
Confidence 346788999886 44 5666666665433388888733243333 334533 222 222222 111 225689
Q ss_pred EEEEcccccCCcchHHHHHHHHHHhcCCCceEEE
Q 046623 127 MVIMSDVFYDPEEMVGLGKTLKRVCGTGRHTVVW 160 (218)
Q Consensus 127 ~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG~~~i~ 160 (218)
+|+-. .. ........++|+++|+++.+
T Consensus 218 ~v~d~--~g-----~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDL--VG-----GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEES--SC-----HHHHHHHGGGEEEEEEEEEC
T ss_pred EEEEC--CC-----cHHHHHHHHhccCCCEEEEe
Confidence 88842 11 12337778899999944433
No 492
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=70.92 E-value=15 Score=29.01 Aligned_cols=116 Identities=14% Similarity=0.158 Sum_probs=59.3
Q ss_pred CeEEEECCCC-C-HHHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEEc
Q 046623 55 KSVLELGAGA-G-LPGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIMS 131 (218)
Q Consensus 55 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~~ 131 (218)
.+|.=||+|. | .++..+++.|. +|+..|.++ ..+.+.+. +.. ....+..+ .....|+|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g~~----~~~~~~~e-------~~~~aDvvi~~ 71 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----GAC----GAAASARE-------FAGVVDALVIL 71 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TCS----EEESSSTT-------TTTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----CCc----cccCCHHH-------HHhcCCEEEEE
Confidence 4788888873 2 23334456665 899999998 76665432 321 11111111 22457999974
Q ss_pred ccccCCcchHHHH---HHHHHHhcCCCceEEEEEeeccCChHHHHHHHHHhCCcEEEEEEcc
Q 046623 132 DVFYDPEEMVGLG---KTLKRVCGTGRHTVVWAVSEVRTRTGDCLHELIMSQGFRVIELTCQ 190 (218)
Q Consensus 132 ~~~~~~~~~~~~l---~~~~~lL~~gG~~~i~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~ 190 (218)
-+. ......++ +.+...++++. +++............+...+.+.|......|+.
T Consensus 72 vp~--~~~~~~v~~~~~~l~~~l~~g~--ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 129 (303)
T 3g0o_A 72 VVN--AAQVRQVLFGEDGVAHLMKPGS--AVMVSSTISSADAQEIAAALTALNLNMLDAPVS 129 (303)
T ss_dssp CSS--HHHHHHHHC--CCCGGGSCTTC--EEEECSCCCHHHHHHHHHHHHTTTCEEEECCEE
T ss_pred CCC--HHHHHHHHhChhhHHhhCCCCC--EEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCC
Confidence 331 11233333 44455677765 333322222223333433436777766655544
No 493
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=70.84 E-value=24 Score=25.78 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=53.2
Q ss_pred eEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 56 SVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 56 ~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
+||=.| |+|.++..+ ++.|. +|++++.++ ...... ...++++.+|+.+... .....+|+|+.
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~---~~~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE---ADLDSVDAVVD 68 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH---HHHTTCSEEEE
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCC-EEEEEEeccccccccc--------CCCceEEecccccccH---hhcccCCEEEE
Confidence 455555 467666665 34454 899999887 543221 1348889999876654 13357899997
Q ss_pred cccccCC-cc---hHHHHHHHHHHhcCCCceEEEEE
Q 046623 131 SDVFYDP-EE---MVGLGKTLKRVCGTGRHTVVWAV 162 (218)
Q Consensus 131 ~~~~~~~-~~---~~~~l~~~~~lL~~gG~~~i~~~ 162 (218)
+...... .. -......+.+.++..|..+++++
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 5543211 11 22233445555555444555553
No 494
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=70.70 E-value=27 Score=29.57 Aligned_cols=90 Identities=22% Similarity=0.226 Sum_probs=52.1
Q ss_pred CeEEEECCCCCH--HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHh-------C-C------CCceEEEEeecCCCCcc
Q 046623 55 KSVLELGAGAGL--PGLTAARLGATRVVLTDVKP-LLPGLINNVEAN-------G-L------GGRVEVRELVWGSDDLS 117 (218)
Q Consensus 55 ~~vLDlG~G~G~--~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~-------~-~------~~~~~~~~~d~~~~~~~ 117 (218)
.+|.=||+|.=. ++..++..|. .|+.+|.++ .++.+++.+..+ + + .....+ ..|. .
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-----~ 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-----K 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-----G
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-----H
Confidence 468899998533 3344456665 899999999 887766543211 1 0 000111 1121 0
Q ss_pred ccccCCCCcEEEEcccccCCcchHHHHHHHHHHhcCCC
Q 046623 118 QLSELGEFDMVIMSDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 118 ~~~~~~~~D~Iv~~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
.....|+|+..-+ ........++..+...++++.
T Consensus 111 ---~~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ 144 (463)
T 1zcj_A 111 ---ELSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGA 144 (463)
T ss_dssp ---GGTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTC
T ss_pred ---HHCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCe
Confidence 2246899997433 221223677788888888876
No 495
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=70.62 E-value=20 Score=27.44 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=49.9
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEe-cCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----c
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLT-DVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~-D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~ 120 (218)
.+++++|=-|++.|. ++..+++.|. +|+.+ +.++ ..+.+.+.++..+ .++.++.+|+.+...- .. .
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 567788888876653 3334466676 78877 6666 6666666665554 4488889998765311 11 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..++.|+++.+.-
T Consensus 83 ~~g~id~lv~nAg 95 (259)
T 3edm_A 83 KFGEIHGLVHVAG 95 (259)
T ss_dssp HHCSEEEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 1257899997653
No 496
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=70.47 E-value=22 Score=26.36 Aligned_cols=87 Identities=11% Similarity=0.033 Sum_probs=47.2
Q ss_pred eEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCccccccCCCCcEEEE
Q 046623 56 SVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLSQLSELGEFDMVIM 130 (218)
Q Consensus 56 ~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~Iv~ 130 (218)
+|+=+|+ |..+..+ .+.|. .|+.+|.++ .++.+.+. . ...++.+|..+...-.......+|.+++
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 3555665 5555554 34454 899999998 66654332 1 2567888776543211112457899987
Q ss_pred cccccCCcchHHHHHHHHHHhcCCC
Q 046623 131 SDVFYDPEEMVGLGKTLKRVCGTGR 155 (218)
Q Consensus 131 ~~~~~~~~~~~~~l~~~~~lL~~gG 155 (218)
.-. .+....++..+.+.+.+..
T Consensus 72 ~~~---~d~~n~~~~~~a~~~~~~~ 93 (218)
T 3l4b_C 72 LTP---RDEVNLFIAQLVMKDFGVK 93 (218)
T ss_dssp CCS---CHHHHHHHHHHHHHTSCCC
T ss_pred ecC---CcHHHHHHHHHHHHHcCCC
Confidence 432 1222333344444444444
No 497
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=70.30 E-value=22 Score=30.12 Aligned_cols=37 Identities=41% Similarity=0.520 Sum_probs=25.5
Q ss_pred CeEEEECCC-CCHH-HHHHHHhCCCeEEEecCcc-hHHHHH
Q 046623 55 KSVLELGAG-AGLP-GLTAARLGATRVVLTDVKP-LLPGLI 92 (218)
Q Consensus 55 ~~vLDlG~G-~G~~-~~~l~~~~~~~v~~~D~~~-~~~~a~ 92 (218)
.+|-=+|+| .|.. +..+++.|. +|+++|+++ .++...
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~-~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGH-RVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHH
Confidence 478788777 4432 333466776 999999998 766653
No 498
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=70.24 E-value=15 Score=29.20 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=26.7
Q ss_pred CCCCeEEEECCC-CCH-HHHHHHHhCCCeEEEecCcc
Q 046623 52 FQNKSVLELGAG-AGL-PGLTAARLGATRVVLTDVKP 86 (218)
Q Consensus 52 ~~~~~vLDlG~G-~G~-~~~~l~~~~~~~v~~~D~~~ 86 (218)
.+..+||=+||| .|. .+..+++.|..+++.+|.+.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 456799999998 554 44556888988999998653
No 499
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=70.17 E-value=19 Score=28.23 Aligned_cols=78 Identities=23% Similarity=0.269 Sum_probs=49.7
Q ss_pred CCCCeEEEECCCCCHHHHHH----HHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCc-ccc-----c
Q 046623 52 FQNKSVLELGAGAGLPGLTA----ARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDL-SQL-----S 120 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~~~~~l----~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~-----~ 120 (218)
.+++++|=.|++. .++..+ ++.|. +|+.++.++ ..+.+.+.+...+ ..+.++.+|+.+... ... .
T Consensus 32 l~~k~vlVTGas~-gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 32 LKGKIALVTGASY-GIGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIES 107 (291)
T ss_dssp CTTCEEEEETCSS-HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHH
Confidence 4577888777654 444443 55565 899999988 7666665555544 347888888876531 111 1
Q ss_pred cCCCCcEEEEccc
Q 046623 121 ELGEFDMVIMSDV 133 (218)
Q Consensus 121 ~~~~~D~Iv~~~~ 133 (218)
..+.+|+++.+.-
T Consensus 108 ~~g~iD~lvnnAg 120 (291)
T 3cxt_A 108 EVGIIDILVNNAG 120 (291)
T ss_dssp HTCCCCEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 2357999997654
No 500
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=70.05 E-value=15 Score=27.93 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=47.4
Q ss_pred CCCCeEEEECCCCCH---HHHHHHHhCCCeEEEecCcc-hHHHHHHHHHHhCCCCceEEEEeecCCCCcc-cc-----cc
Q 046623 52 FQNKSVLELGAGAGL---PGLTAARLGATRVVLTDVKP-LLPGLINNVEANGLGGRVEVRELVWGSDDLS-QL-----SE 121 (218)
Q Consensus 52 ~~~~~vLDlG~G~G~---~~~~l~~~~~~~v~~~D~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-----~~ 121 (218)
.+++++|=-|++.|. ++..+++.|. +|+.++.++ ..+.+.+.+.. ...++.+|+.+...- .. ..
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHHH
Confidence 467778877766552 2333456666 899999888 66665544422 367788888765311 11 11
Q ss_pred CCCCcEEEEcccc
Q 046623 122 LGEFDMVIMSDVF 134 (218)
Q Consensus 122 ~~~~D~Iv~~~~~ 134 (218)
.++.|+++.+.-.
T Consensus 81 ~g~iD~lv~nAg~ 93 (248)
T 3op4_A 81 FGGVDILVNNAGI 93 (248)
T ss_dssp HCCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2589999976543
Done!